Cucsa.235690 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATACCTGCCCCTCTCATTTTTtCTTGTGAGAGAGCCAAAAAGTTATTTCTAATTACATATTCAGAGTCTGTCCTCTCTTTATTAATTATGATATTCACTTCATTAGTGTAGTTGGGATTGGTGAGAGGCAGTTGTGGAAGAATATATATATGTGGAGAGATAGACCACTTTCAAACAAAAAAaGCCAAGAATTTTTCTGATCATTTCTTCGAGTGTTATTTGTGTATAGTGATGGGGAAGCTGAAGAAAATGGGAAAGGTTTTTGATTGTTTCAGTTATTCATCCAATTCTTGTAGTTCCAACTCTTGCTTTTGCATAAACTCCATGGAAATTGAAGATGAAGAAGATGAGTTTTTTGATAAACAGCCACTCATTGCCAACAACAACAGAAAAGACAACCAATTGCCCACATTGAAGGATGTTGTCAATGGAAATCAGACCTTAGCCTTTCAACTCAAGCCCAAGGTCCTATTTTCTTTCCAATTTTTGTTTtCTTTTTtCTCTTATTTGCCGACTTCAAGGTTGTTTTTAGATTTCAGTTTTTGAAAGTGAAGGGGTATGTTTCTTAAAAAGAACATATTAGAGAATGAATGTCATGTGTATGACTTGAATCAGTGCTTCTAAGTTTGATTTTCAAAGGTAGAAAAGTAAAAACCAAGACTCTGTTTGAAAATTAACACAGTGTTCTTCCTTAGATGTGTTGTTTTGTTATCAATTTTCTATTAATATTTTCAAAAATAAAAATTTAAAATCGAGACCCATTTGGTAACTTTTTtATTTTTAGTATATAAAAAAaTTACACTAAATTATATACGTTTTGTCTTTTTTAATAAAGAACAAACTATAAATTTTAAAAATTAAGAAAGGCTCTTTTTAGTTCTTTCTTAATTAAAAGTTTATCTACGAGTACAACTCTCTCCCACATAAAGTATTGTAAAGAATTGAAAGAAAAGATGATTATTTTCAAAATATTTACACAACTGGGATGCAATTCTTTGAATTAAAGTGTAGTGTTTTTGAAAGAGAGAGTATTTCTGATTTTTCAGATGGTGACACTGAGAGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACACATTTCAAAGATGGAAGGTACTTAAACCCATTATTAAACCTTATATATACAAATATATATTATTACACCAATTATTTTAAATGTTATCTAACTAATTAATTAAGCAATTAATTTTGAAATATATGTTTAGTTTGCTTATTaTTTTTTTtAAAAAAATGAATGTAACAGGAGTGAGCTCATACACAATAGACTTGGAGACTAAGATGGTGATTATTATTGGAGATATTCTGCCCTTTGAAGTGGTGGAGAGCGTTTCTAAAGTAAAAAACGCACAGCTTTGGCAATCCTCTATAGCTTCATGATAACTATTATTGAAATATCAACAATATATATATTTATTAATTAGAAATATGTACATCTTTTTTCTCTACAAGTAAAACAGATTGATCGGAATTTTGCAGAGAATATTTTCATATTCTTTGTAATTTTGTGTTTTTAATTTCGATATTTTCTATATATTGTTTATTATTATACTATAGATTGACCATATGTGATGCCACTTAATTTATATATTGTTGAGTATTTAT TTATACCTGCCCCTCTCATTTTTTCTTGTGAGAGAGCCAAAAAGTTATTTCTAATTACATATTCAGAGTCTGTCCTCTCTTTATTAATTATGATATTCACTTCATTAGTGTAGTTGGGATTGGTGAGAGGCAGTTGTGGAAGAATATATATATGTGGAGAGATAGACCACTTTCAAACAAAAAAAGCCAAGAATTTTTCTGATCATTTCTTCGAGTGTTATTTGTGTATAGTGATGGGGAAGCTGAAGAAAATGGGAAAGGTTTTTGATTGTTTCAGTTATTCATCCAATTCTTGTAGTTCCAACTCTTGCTTTTGCATAAACTCCATGGAAATTGAAGATGAAGAAGATGAGTTTTTTGATAAACAGCCACTCATTGCCAACAACAACAGAAAAGACAACCAATTGCCCACATTGAAGGATGTTGTCAATGGAAATCAGACCTTAGCCTTTCAACTCAAGCCCAAGATGGTGACACTGAGAGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACACATTTCAAAGATGGAAGGAGTGAGCTCATACACAATAGACTTGGAGACTAAGATGGTGATTATTATTGGAGATATTCTGCCCTTTGAAGTGGTGGAGAGCGTTTCTAAAGTAAAAAACGCACAGCTTTGGCAATCCTCTATAGCTTCATGATAACTATTATTGAAATATCAACaatatatatatttattaattaGAAATATGTACATCTTTTTTCTCTACAAGTAAAACAGATTGATCGGAATTTTGCAGAGAATATTTTCATATTCTTTGTAATTTTGTGTTTTTAATTTCGATATTTTCTATATATTGTTTATTATTATACTATAGATTGACCATATGTGATGCCACTTAATTTATATATTGTTGAGTATTTAT ATGGGGAAGCTGAAGAAAATGGGAAAGGTTTTTGATTGTTTCAGTTATTCATCCAATTCTTGTAGTTCCAACTCTTGCTTTTGCATAAACTCCATGGAAATTGAAGATGAAGAAGATGAGTTTTTTGATAAACAGCCACTCATTGCCAACAACAACAGAAAAGACAACCAATTGCCCACATTGAAGGATGTTGTCAATGGAAATCAGACCTTAGCCTTTCAACTCAAGCCCAAGATGGTGACACTGAGAGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACACATTTCAAAGATGGAAGGAGTGAGCTCATACACAATAGACTTGGAGACTAAGATGGTGATTATTATTGGAGATATTCTGCCCTTTGAAGTGGTGGAGAGCGTTTCTAAAGTAAAAAACGCACAGCTTTGGCAATCCTCTATAGCTTCATGA MGKLKKMGKVFDCFSYSSNSCSSNSCFCINSMEIEDEEDEFFDKQPLIANNNRKDNQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSIAS*
BLAST of Cucsa.235690 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 24/65 (36.92%), Postives = 43/65 (66.15%), Query Frame = 1
BLAST of Cucsa.235690 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 1
BLAST of Cucsa.235690 vs. TrEMBL
Match: A0A0A0LZH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G384030 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 9.9e-78 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Cucsa.235690 vs. TrEMBL
Match: W9QGV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020845 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.9e-44 Identity = 97/143 (67.83%), Postives = 115/143 (80.42%), Query Frame = 1
BLAST of Cucsa.235690 vs. TrEMBL
Match: A0A067KBD6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13233 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 1
BLAST of Cucsa.235690 vs. TrEMBL
Match: B9ILJ2_POPTR (Copper-binding family protein OS=Populus trichocarpa GN=POPTR_0018s06190g PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-42 Identity = 93/143 (65.03%), Postives = 115/143 (80.42%), Query Frame = 1
BLAST of Cucsa.235690 vs. TrEMBL
Match: B9RPB5_RICCO (Chloroplast-targeted copper chaperone, putative OS=Ricinus communis GN=RCOM_0926510 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41 Identity = 92/143 (64.34%), Postives = 114/143 (79.72%), Query Frame = 1
BLAST of Cucsa.235690 vs. TAIR10
Match: AT3G24450.1 (AT3G24450.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 161.8 bits (408), Expect = 3.3e-40 Identity = 80/145 (55.17%), Postives = 111/145 (76.55%), Query Frame = 1
BLAST of Cucsa.235690 vs. TAIR10
Match: AT2G28660.1 (AT2G28660.1 Chloroplast-targeted copper chaperone protein) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-20 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 1
BLAST of Cucsa.235690 vs. TAIR10
Match: AT5G02600.2 (AT5G02600.2 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 4.6e-18 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1
BLAST of Cucsa.235690 vs. TAIR10
Match: AT2G37390.1 (AT2G37390.1 Chloroplast-targeted copper chaperone protein) HSP 1 Score: 84.3 bits (207), Expect = 6.7e-17 Identity = 34/64 (53.12%), Postives = 50/64 (78.12%), Query Frame = 1
BLAST of Cucsa.235690 vs. TAIR10
Match: AT3G53530.2 (AT3G53530.2 Chloroplast-targeted copper chaperone protein) HSP 1 Score: 75.1 bits (183), Expect = 4.1e-14 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 1
BLAST of Cucsa.235690 vs. NCBI nr
Match: gi|449467163|ref|XP_004151294.1| (PREDICTED: uncharacterized protein LOC101204496 [Cucumis sativus]) HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Cucsa.235690 vs. NCBI nr
Match: gi|659126802|ref|XP_008463373.1| (PREDICTED: uncharacterized protein LOC103501543 [Cucumis melo]) HSP 1 Score: 287.0 bits (733), Expect = 1.9e-74 Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 1
BLAST of Cucsa.235690 vs. NCBI nr
Match: gi|703070732|ref|XP_010088858.1| (hypothetical protein L484_020845 [Morus notabilis]) HSP 1 Score: 186.8 bits (473), Expect = 2.7e-44 Identity = 97/143 (67.83%), Postives = 115/143 (80.42%), Query Frame = 1
BLAST of Cucsa.235690 vs. NCBI nr
Match: gi|1012085394|ref|XP_015954342.1| (PREDICTED: uncharacterized protein LOC107478720 [Arachis duranensis]) HSP 1 Score: 186.0 bits (471), Expect = 4.6e-44 Identity = 96/140 (68.57%), Postives = 115/140 (82.14%), Query Frame = 1
BLAST of Cucsa.235690 vs. NCBI nr
Match: gi|802640076|ref|XP_012078658.1| (PREDICTED: uncharacterized protein LOC105639268 [Jatropha curcas]) HSP 1 Score: 183.3 bits (464), Expect = 3.0e-43 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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