Cucsa.130080 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGGGAAATACAAAAGAAAAAAGCAAAGTAAAGCAAAATAAAAAAAAAAAAAAGAAACGAGAAAGCCATAAGTGAAGTGAATTGAAAGCTATGGGTCAGGCTTTATAAAAGGAGGCATCACTTCCTCTCTTTGGGGTCCGGCATGATCCGCAATTGGATCAAGCCATAATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAAGTAAACCTTCTCTAATTTTTCTTTCACATTTTTTTTTTCTTTTCTAAATAAGTTTGTTTCTAGGTTTTGGTTCCCTAAATATTTGGTTTTTGGGATGAAAAAGTAGACTTTTGTTTTTTGTTTTAAATTGAAATATGAAAACCTTAAATAGAACGTTTTGAAAAAAAATAAACATAATTTTCATAATTCCAAAACCATTTTATCCAAATAGGTGATTTTTGTATTGATGATCCCTTTCTTTTCAACAACATTATGATTAATGATCTATCCTCGTATACGTATAAACATTTTACTTACATTCCAGTGTAATATTGGATTTTTATAACTATTGCTTTAGGACAACTATCTCTAGTAAGCTTTGAAGATCATTACCCATGAAAAGGTCACCCGTACAAACAAAATTCTTCCAAAGATTTCCACTCAAAACGTAGTTTCATTTTTAAGTGATTAACACAACAAACAAACCTATAGATAGAAGTAGTACTTACTATCTTAATTTTTTTAAAAAACAACTCAAAACTAAAATGAGTCTGAATTGTAAGAATGCTAAATCGGTTAGACTTGTTTGTTAACTTTTAAATTACTATTTATCTTAGTTAAGTTAGGTTCGTGTCTCTCAGTTATTATAATTACTTGGAAGGCCATCTATAATAACTCTCTTTTGTTACATTAAATATTATTTTAAAGTTTTCAATTAGTTACACTAAACCCTATTTCAAAACTCTCATTTCTCTACCTTATTTACTATTTGTTATAGTTTTTAATATTTTACATTTCATCATTTTTTTTTGTTGGTTCTTTGTTATAATATTTAATATTTTTTTATAAAATTAAAATAATTCATACACCAAACACATAATATTATAACTCAAACTAAAATAATCTATACATTAAATAAAAACTATTTTAATCAAATTATAATAACTCATTCTTTCTTGCTCCTAACATCTCCATAGTATAATTCATTAGTTTAATCAAAGCAATGTGCTTAGATGAAGTCAACGAGGTTGTAAACCATGTTTAAGGTTAAATTAACTTCCGATTTTCCACGTAACAAACCTTTAAATTTTAAAATATGTTTGTTAATCTATTGAAATGTTAAAATCTATTCGCCCCAAAACTTAAATTTCCTAAACTTGTTAAACCACAGTTTCCAAAGTTCATTTTCTTTTATTAAATATGAAATTAGGGTATGGAATAAAGTGGAAGAAAAGAGAGACCGGGGGATTATTATTATTATTATATATATATAGATAACAAAATTAAAATTAAAAAAAAAAATATGTTGCTTTTAGAATCTGGACCGTTGAATCACAGAATTCAGAAACATTTTTTTAAAGAGAATCTAAATTATATATGAGGCATATATTTCAATTTAAAAATATAAAACAAAATTTGGATTGAAAATCAAATAAAATGTATTACCAACTAAAATAATTAAGTTAAGACTTCAGCAACTGATAGTATCTTGTATTTGAACTGGTATAAGTAGTGGGAAAAAGGATCGAAAGATGCGACTGAAAGAGCTCCCGAGATGAAGATGGAGGGTCAAAAACGTAAAGGAGGCAGGATGGACAGATTGTCCAGTATGGATGGTAGTACATGGACGGTGGTTGAAGTCAGCAGCTGTTTTAAGGCCTCATATGGGATCCCTGGGGAAGAGGATCTACTTACTTTCTGAAAACTAATAATTCAAAAGCTACTAACCCCATTACTAATTAATGTTGGTCAAAATTATTTGTTCAAAAAAGAGTATATGGGTCATTTAATACTCATTTAGTCATGTTGCTATTGACAGTGCCGTACCCCATTTACAATTATGATTATTAATGCTCTTGTCTCTTGCTTAACTCAGTTTTCTTTTATTATTCTTTCCTAATGCAATTTTAATTTATCAATTGTTGAAATCTCAAATACATACTAAGTAAGTAGTTACTAACTAACTATGTTATTGTTCGTGTGCAGCATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGTACTAACTCTTTTACTATTATCACTTCAATTACAAATATAGTTAATTACCAATAAATAATAGGATGGGCGGAAATGTGTCTAATCCATGGTAATCACCAACCAATAATAAAATATTATAAGAGTTTTCTTAACACTGAAATGCAGTAGAGTTTGAAATTGAAATTTATCTAGACATAGACAGGTAAACTGCACTGGTCACTCATTGTATAAATTGCTATAGAAATGGGCACGATATAAATGTTAAATCTACTAAACTTATGCGTTTTGGCATGTGAAGGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGGTAGCATTGCTTACTTAACAGCTTCTATTTCTGTTTCTTTCTTGATTGAATCCTGAGTAAGTCAATGAAATGCAGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGTTGGTCAGCTTCGATTCAAGCTAGTTTTTTCCTTGTTCTTTGCTTTGTAATTCTTTGAAATCAATCTGTTTTCTTTTGTCTGAATCAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAAACACAGGGAGAGATCTCAAGATCAAACCAGCCAGAAAATTAGATACTGCAGTCAATGGAGAAGTTTGTCATTTGAAATAACAATACTAGAAGATAATTATAGAATATA GTTAGGGaaatacaaaagaaaaaagcaaagtaaagcaaaataaaaaaaaaaaaaagaaacgagaaaGCCATAAGTGAAGTGAATTGAAAGCTATGGGTCAGGCTTTATAAAAGGAGGCATCACTTCCTCTCTTTGGGGTCCGGCATGATCCGCAATTGGATCAAGCCATAATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAACATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAAACACAGGGAGAGATCTCAAGATCAAACCAGCCAGAAAATTAGATACTGCAGTCAATGGAGAAGTTTGTCATTTGAAATAACAATACTAGAAGATAATTATAGAATATA ATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAACATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAA MGHLVGGWSAVATALCALLLFLSLPPSASEKVTVSVYYEALCPFCANFVVYHLVKLFQNGLISAVNLRMIPWGNAWIQPDGSFFCQHGPDECMLNTIEACTISVYPDTEEHFRFIHCVEGLTVQNRHNEWTKCFDIAQLSAIPIDCYRNGHGKMLEQYYASETTRLNPPHRFVPWVIVDNHPLQEDYQNFMAYICKAYKGSAVPEACKSINLKNRQYLDNASGGSQVCYATTTRNSTL*
BLAST of Cucsa.130080 vs. Swiss-Prot
Match: GILT_MOUSE (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus GN=Ifi30 PE=1 SV=3) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-21 Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 1
BLAST of Cucsa.130080 vs. Swiss-Prot
Match: GILT_RAT (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus GN=Ifi30 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20 Identity = 67/214 (31.31%), Postives = 104/214 (48.60%), Query Frame = 1
BLAST of Cucsa.130080 vs. Swiss-Prot
Match: GILT_BOVIN (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus GN=IFI30 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19 Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 1
BLAST of Cucsa.130080 vs. Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=3) HSP 1 Score: 96.3 bits (238), Expect = 4.9e-19 Identity = 62/192 (32.29%), Postives = 91/192 (47.40%), Query Frame = 1
BLAST of Cucsa.130080 vs. Swiss-Prot
Match: GILT_PIG (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa GN=IFI30 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.4e-18 Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 1
BLAST of Cucsa.130080 vs. TrEMBL
Match: A0A0A0L2Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312830 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 4.6e-141 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.130080 vs. TrEMBL
Match: I1JL84_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G050500 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 8.5e-79 Identity = 130/222 (58.56%), Postives = 167/222 (75.23%), Query Frame = 1
BLAST of Cucsa.130080 vs. TrEMBL
Match: A0A0B2P631_GLYSO (Gamma-interferon-inducible lysosomal thiol reductase OS=Glycine soja GN=glysoja_037497 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 8.5e-79 Identity = 130/222 (58.56%), Postives = 167/222 (75.23%), Query Frame = 1
BLAST of Cucsa.130080 vs. TrEMBL
Match: A0A067FJ87_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042427mg PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78 Identity = 137/220 (62.27%), Postives = 167/220 (75.91%), Query Frame = 1
BLAST of Cucsa.130080 vs. TrEMBL
Match: G7JLT4_MEDTR (Gamma interferon inducible lysosomal thiol reductase OS=Medicago truncatula GN=MTR_4g014610 PE=4 SV=2) HSP 1 Score: 295.4 bits (755), Expect = 6.1e-77 Identity = 139/233 (59.66%), Postives = 173/233 (74.25%), Query Frame = 1
BLAST of Cucsa.130080 vs. TAIR10
Match: AT5G01580.1 (AT5G01580.1 gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 250.8 bits (639), Expect = 8.7e-67 Identity = 110/218 (50.46%), Postives = 152/218 (69.72%), Query Frame = 1
BLAST of Cucsa.130080 vs. TAIR10
Match: AT1G07080.1 (AT1G07080.1 Thioredoxin superfamily protein) HSP 1 Score: 220.3 bits (560), Expect = 1.3e-57 Identity = 94/184 (51.09%), Postives = 135/184 (73.37%), Query Frame = 1
BLAST of Cucsa.130080 vs. TAIR10
Match: AT4G12890.1 (AT4G12890.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40 Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = 1
BLAST of Cucsa.130080 vs. TAIR10
Match: AT4G12900.1 (AT4G12900.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40 Identity = 86/216 (39.81%), Postives = 122/216 (56.48%), Query Frame = 1
BLAST of Cucsa.130080 vs. TAIR10
Match: AT4G12870.1 (AT4G12870.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 142.9 bits (359), Expect = 2.6e-34 Identity = 74/204 (36.27%), Postives = 114/204 (55.88%), Query Frame = 1
BLAST of Cucsa.130080 vs. NCBI nr
Match: gi|449461757|ref|XP_004148608.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Cucumis sativus]) HSP 1 Score: 508.4 bits (1308), Expect = 6.6e-141 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1
BLAST of Cucsa.130080 vs. NCBI nr
Match: gi|659128470|ref|XP_008464223.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo]) HSP 1 Score: 481.1 bits (1237), Expect = 1.1e-132 Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 1
BLAST of Cucsa.130080 vs. NCBI nr
Match: gi|1009158687|ref|XP_015897417.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Ziziphus jujuba]) HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84 Identity = 146/228 (64.04%), Postives = 176/228 (77.19%), Query Frame = 1
BLAST of Cucsa.130080 vs. NCBI nr
Match: gi|571443548|ref|XP_006576222.1| (PREDICTED: uncharacterized protein LOC100784702 isoform X1 [Glycine max]) HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78 Identity = 130/222 (58.56%), Postives = 167/222 (75.23%), Query Frame = 1
BLAST of Cucsa.130080 vs. NCBI nr
Match: gi|734318471|gb|KHN03097.1| (Gamma-interferon-inducible lysosomal thiol reductase [Glycine soja]) HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78 Identity = 130/222 (58.56%), Postives = 167/222 (75.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |