Cucsa.079440 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.079440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00793 : 2295056 .. 2295210 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTTTTGGCGGTGGTGGAGGAGACTTTTTTGGCGGTGGTGGAGGAGACTTTTTTGGTGGTGGAGGTGGTGGAGGTGAGAGATATTCGTCTCTCTTTGGTGGTGGTGGAGGGGGGGATTTCCGTTTGTATGGAGGTGGGGGTGGAGACTTGTAA

mRNA sequence

acttttttggcggtggtggaggagacttttttggcggtggtggaggagacttttttggtggtggaggtggtggaggtgAGAGATATTCGTCTCTCTTTGGTGGTGGTGGAGGGGGGGATTTCCGTTTGTATGGAGGTGGGGGTGGAGACTTGTAA

Coding sequence (CDS)

ACTTTTTTGGCGGTGGTGGAGGAGACTTTTTTGGCGGTGGTGGAGGAGACTTTTTTGGTGGTGGAGGTGGTGGAGGTGAGAGATATTCGTCTCTCTTTGGTGGTGGTGGAGGGGGGGATTTCCGTTTGTATGGAGGTGGGGGTGGAGACTTGTAA

Protein sequence

FFGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL*
Homology
[Close]
BLAST of Cucsa.079440 vs. Swiss-Prot
Match: RBG8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.4e-10
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGG 48
           GGGG + GGGGG + GGGGGG ER S  +G GGGG  R YGGGG
Sbjct: 104 GGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGG 147


HSP 2 Score: 48.5 bits (114), Expect = 2.5e-05
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDF------FGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
           + GGGGG + GGGGG +      +G GGGGG R     G GGGG     G GGGD
Sbjct: 109 YSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGR-----GYGGGGRREGGGYGGGD 158


HSP 3 Score: 41.6 bits (96), Expect = 3.0e-03
Identity = 22/36 (61.11%), Postives = 24/36 (66.67%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGG 39
           GGGGG    GGGG   GGG GGG+  S  +GGGGGG
Sbjct: 135 GGGGGGRGYGGGGRREGGGYGGGDGGS--YGGGGGG 168

[Close]
BLAST of Cucsa.079440 vs. Swiss-Prot
Match: DED1_MAGO7 (ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-08
Identity = 32/49 (65.31%), Postives = 32/49 (65.31%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGGG-GGGGERYSSLFGGGGGGDFRLYGGGGG 49
           F GGGGG F GGGGG F GGG GGGG  Y    GG GGG    YGGGGG
Sbjct: 613 FGGGGGGGFNGGGGGGFSGGGYGGGGGGYGGGGGGYGGGG---YGGGGG 658


HSP 2 Score: 51.6 bits (122), Expect = 2.9e-06
Identity = 27/47 (57.45%), Postives = 29/47 (61.70%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGGGGGGGERY-SSLFGGGGGGDFRLYGGG 47
           F GGGGG F GGG G   GG GGGG  Y    +GGGGGG +   GGG
Sbjct: 621 FNGGGGGGFSGGGYGGGGGGYGGGGGGYGGGGYGGGGGGSYGNPGGG 667


HSP 3 Score: 45.4 bits (106), Expect = 2.1e-04
Identity = 26/44 (59.09%), Postives = 26/44 (59.09%), Query Frame = 1 

Query: 5   GGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGG   GGGG     G GGGG R    FGGGGGG F   GGGGG
Sbjct: 590 GGGRGRGGGGR----GRGGGGNRDFRKFGGGGGGGFN--GGGGG 627

[Close]
BLAST of Cucsa.079440 vs. Swiss-Prot
Match: DHX9_MOUSE (ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-08
Identity = 32/49 (65.31%), Postives = 32/49 (65.31%), Query Frame = 1 

Query: 2    FGGGGGDFFGGGGGDFFG--GGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
            FGGGGG F GGGGG F G  GGGGGG   S  FG GGGG    YG GGG
Sbjct: 1232 FGGGGGGFSGGGGGGFGGGRGGGGGGFGGSGGFGNGGGG----YGVGGG 1276


HSP 2 Score: 53.1 bits (126), Expect = 1.0e-06
Identity = 29/53 (54.72%), Postives = 30/53 (56.60%), Query Frame = 1 

Query: 2    FGGGGGDF------FGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
            FG GGG F      FGGGGG F GGGGGG       FGGG GG    +GG GG
Sbjct: 1218 FGSGGGGFGSGGGGFGGGGGGFSGGGGGG-------FGGGRGGGGGGFGGSGG 1263


HSP 3 Score: 51.6 bits (122), Expect = 2.9e-06
Identity = 27/52 (51.92%), Postives = 31/52 (59.62%), Query Frame = 1 

Query: 2    FGGGGGDFFGGGGGDFFGGGGGGGERYS-------SLFGGGGGGDFRLYGGG 47
            +GGGGG  +GGG G + GGG GGGE YS         +GGGGGG    Y GG
Sbjct: 1278 YGGGGGGGYGGGSGGYGGGGYGGGEGYSISPNSYRGNYGGGGGG----YRGG 1325


HSP 4 Score: 50.4 bits (119), Expect = 6.5e-06
Identity = 30/53 (56.60%), Postives = 30/53 (56.60%), Query Frame = 1 

Query: 1    FFGGGGGDFFG--GGGGDFFGGGGG---GGERYSSLFGGGGGGDFRLYGGGGG 49
            F GGGGG F G  GGGG  FGG GG   GG  Y    GG GGG    YGGG G
Sbjct: 1239 FSGGGGGGFGGGRGGGGGGFGGSGGFGNGGGGYGVGGGGYGGGGGGGYGGGSG 1291


HSP 5 Score: 47.0 bits (110), Expect = 7.2e-05
Identity = 28/47 (59.57%), Postives = 28/47 (59.57%), Query Frame = 1 

Query: 3    GGG-GGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
            GGG GG F  GGGG  FG GGGG       FGGGGGG     GGGGG
Sbjct: 1204 GGGFGGGFNSGGGG--FGSGGGGFGSGGGGFGGGGGG---FSGGGGG 1245


HSP 6 Score: 44.3 bits (103), Expect = 4.7e-04
Identity = 26/48 (54.17%), Postives = 26/48 (54.17%), Query Frame = 1 

Query: 4    GGGGDFFGGGGGDFFGG---GGGGGERYSSLFGGGGGGDFRLYGGGGG 49
            GG G F  GGGG   GG   GGGGG  Y    GG GGG    YGGG G
Sbjct: 1259 GGSGGFGNGGGGYGVGGGGYGGGGGGGYGGGSGGYGGGG---YGGGEG 1303

[Close]
BLAST of Cucsa.079440 vs. Swiss-Prot
Match: CAZ_DROME (RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 7.0e-08
Identity = 30/48 (62.50%), Postives = 32/48 (66.67%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           GGGGG   GGGGG F  GGGGGG RY    GGGGGG     GGGGG++
Sbjct: 232 GGGGGGGGGGGGGRFDRGGGGGGGRYDR--GGGGGG-----GGGGGNV 272


HSP 2 Score: 53.1 bits (126), Expect = 1.0e-06
Identity = 29/48 (60.42%), Postives = 31/48 (64.58%), Query Frame = 1 

Query: 3   GGGGGDFFGG--GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGG   FGG  GGG   GGGGGGG R+    GGGGGG +   GGGGG
Sbjct: 219 GGGGRGGFGGRRGGGGGGGGGGGGGGRFDR-GGGGGGGRYDRGGGGGG 265


HSP 3 Score: 48.1 bits (113), Expect = 3.3e-05
Identity = 28/47 (59.57%), Postives = 28/47 (59.57%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFG--GGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGG   GGG G F G  GGGGGG       GGGGGG F   GGGGG
Sbjct: 213 GGGGGGGGGGRGGFGGRRGGGGGGGG-----GGGGGGRFDRGGGGGG 254


HSP 4 Score: 42.4 bits (98), Expect = 1.8e-03
Identity = 24/52 (46.15%), Postives = 26/52 (50.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGG------DFRLYGGGGG 49
           G   G   GGGGG + GGGGGGG    +  G GGGG           GGGGG
Sbjct: 303 GDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGG 354


HSP 5 Score: 40.0 bits (92), Expect = 8.9e-03
Identity = 28/75 (37.33%), Postives = 33/75 (44.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGG-----------------------GGDFFGGGGGGG-----ERYSSLFGG 50
           GGGGG + GGG                       GG+  GGGGGGG      R++   GG
Sbjct: 311 GGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGG 370


HSP 6 Score: 30.4 bits (67), Expect = 7.0e+00
Identity = 14/22 (63.64%), Postives = 14/22 (63.64%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGG 26
           G GG   GGGGG   GGGG GG
Sbjct: 91  GHGGYSGGGGGGGGGGGGGSGG 112

[Close]
BLAST of Cucsa.079440 vs. Swiss-Prot
Match: EGG2_SCHJA (Eggshell protein 2A OS=Schistosoma japonicum GN=ESG-2A PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.5e-07
Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 1 

Query: 3  GGGGGDFFGG--GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
          GGGGG  +GG  GG D +GGG GGG       GGGGGG+   YGGG GD+
Sbjct: 34 GGGGGGGYGGWCGGSDCYGGGNGGG-------GGGGGGNGGEYGGGYGDV 76


HSP 2 Score: 52.8 bits (125), Expect = 1.3e-06
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGG G  +GGG GD +GG  GGGE Y  ++GGG GG    YGGG G
Sbjct: 62  GGGNGGEYGGGYGDVYGGSYGGGE-YGDVYGGGCGGP-DCYGGGNG 105


HSP 3 Score: 38.1 bits (87), Expect = 3.4e-02
Identity = 23/46 (50.00%), Postives = 24/46 (52.17%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GG GG+  GGGGG   G GGG GE      GG  GG     GG GG
Sbjct: 157 GGKGGN--GGGGGKGGGKGGGNGEGNGKGGGGKNGGGKGGNGGKGG 200

[Close]
BLAST of Cucsa.079440 vs. TrEMBL
Match: A0A0D3DXM7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.4e-09
Identity = 32/50 (64.00%), Postives = 34/50 (68.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERY----SSLFGGGGGGDFRLYGGGGG 49
           GGGGG  FGGG G  +GGGGGGG RY    S  +GGGGGG    YGGGGG
Sbjct: 164 GGGGGGSFGGGSGGSYGGGGGGGGRYGGGGSDSYGGGGGGGGGRYGGGGG 213

[Close]
BLAST of Cucsa.079440 vs. TrEMBL
Match: A0A0D3DXM7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-05
Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGG  +GGGG D +GGGGGGG      +GGGGG     YGG GG
Sbjct: 182 GGGGGGRYGGGGSDSYGGGGGGG---GGRYGGGGGS----YGGDGG 220


HSP 2 Score: 66.6 bits (161), Expect = 9.8e-09
Identity = 35/51 (68.63%), Postives = 35/51 (68.63%), Query Frame = 1 

Query: 1  FFGGGGGDFF--GGGGGDFFGGGGGGG--ERYSSLFGGGGGGDFRLYGGGG 48
          F GGGGGD F  GGGGGD FGGGGGGG        FGGGGGG FR  GGGG
Sbjct: 45 FGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSGGGGG 95

[Close]
BLAST of Cucsa.079440 vs. TrEMBL
Match: J2FX37_9SPHN (Cold shock protein OS=Novosphingobium sp. AP12 GN=PMI02_04961 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.8e-06
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGG--GGDFRLYGGGGG 49
          F  G   F GGGGGD F GGGGGG+R+    GGGG  GG  R  GGGGG
Sbjct: 38 FFAGQDRFGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGG 86


HSP 2 Score: 55.8 bits (133), Expect = 1.7e-05
Identity = 32/54 (59.26%), Postives = 32/54 (59.26%), Query Frame = 1 

Query: 3   GGGGGDFFGG--------GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGGD FGG        GGGD FGGGGGGG R     GGGG G     GGGGG
Sbjct: 57  GGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSG---GGGGFGGGPRGGGGGG 107


HSP 3 Score: 47.8 bits (112), Expect = 4.7e-03
Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 1 

Query: 5   GGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGD FGGGGG  F  GGGGG       GGGGG   ++ G G G
Sbjct: 75  GGGDRFGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 118


HSP 4 Score: 42.7 bits (99), Expect = 1.5e-01
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGG--GGGGGERYSSLFGGGGG 38
           F GGGGG F  GGGG F GG  GGGGG   + + G G G
Sbjct: 80  FGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 118


HSP 5 Score: 33.5 bits (75), Expect = 9.2e+01
Identity = 22/46 (47.83%), Postives = 23/46 (50.00%), Query Frame = 1 

Query: 4  GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
          G G D     G D F     G +R    FGGGGGGD    GGGGGD
Sbjct: 21 GRGRDKRDRFGEDEFDPFFAGQDR----FGGGGGGDRFSGGGGGGD 62


HSP 6 Score: 64.7 bits (156), Expect = 3.7e-08
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGG 48
           GGGG + GGGGG + GGGGGG ER S  +G GGGG  R YGGGG
Sbjct: 104 GGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGG 147

[Close]
BLAST of Cucsa.079440 vs. TrEMBL
Match: B9DFJ8_ARATH (AT4G39260 protein OS=Arabidopsis thaliana GN=At4g39260 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.8e-03
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDF------FGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
           + GGGGG + GGGGG +      +G GGGGG R     G GGGG     G GGGD
Sbjct: 109 YSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGR-----GYGGGGRREGGGYGGGD 158


HSP 2 Score: 41.6 bits (96), Expect = 3.4e-01
Identity = 22/36 (61.11%), Postives = 24/36 (66.67%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGG 39
           GGGGG    GGGG   GGG GGG+  S  +GGGGGG
Sbjct: 135 GGGGGGRGYGGGGRREGGGYGGGDGGS--YGGGGGG 168


HSP 3 Score: 63.9 bits (154), Expect = 6.4e-08
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGG-----GGGGERYSSLFGGGGGGDFRLYGGGGG 49
          FGGGGG + GGGGGD FGGG     GGGG+R+    GGGGGG FR  GGGGG
Sbjct: 41 FGGGGG-YGGGGGGDRFGGGGGGGYGGGGDRFG---GGGGGGGFRGGGGGGG 88

[Close]
BLAST of Cucsa.079440 vs. TrEMBL
Match: A0A0Q8R4B6_9SPHN (Cold-shock protein OS=Sphingomonas sp. Root720 GN=ASE22_15570 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.2e-07
Identity = 31/47 (65.96%), Postives = 32/47 (68.09%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
          FGGGGG  +GGGG  F GGGGGGG R     GGGGGG F   GGGGG
Sbjct: 56 FGGGGGGGYGGGGDRFGGGGGGGGFR-----GGGGGGGF---GGGGG 94


HSP 2 Score: 56.6 bits (135), Expect = 1.0e-05
Identity = 33/61 (54.10%), Postives = 35/61 (57.38%), Query Frame = 1 

Query: 2  FGG------GGGDFFGGGGGDFFGGGGGGGERYSSLFGGGG--------GGDFRLYGGGG 49
          FGG      GGG + GGGGGD FGGGGGGG      +GGGG        GG FR  GGGG
Sbjct: 34 FGGGGDRFGGGGGYGGGGGGDRFGGGGGGG------YGGGGDRFGGGGGGGGFRGGGGGG 88


HSP 3 Score: 53.9 bits (128), Expect = 6.6e-05
Identity = 28/52 (53.85%), Postives = 30/52 (57.69%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDF-----RLYGGGGG 49
          +GG  G  FGGGG  F GGGG GG      FGGGGGG +     R  GGGGG
Sbjct: 26 YGGYSGGGFGGGGDRFGGGGGYGGGGGGDRFGGGGGGGYGGGGDRFGGGGGG 77


HSP 4 Score: 46.2 bits (108), Expect = 1.4e-02
Identity = 21/35 (60.00%), Postives = 23/35 (65.71%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGG 38
           GGGGG F GGGGG  FGGGGG G   + + G G G
Sbjct: 74  GGGGGGFRGGGGGGGFGGGGGRGGMPAQVIGEGKG 108


HSP 5 Score: 44.3 bits (103), Expect = 5.2e-02
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 1 

Query: 4  GGGGDFFGGGGGDFFGGGGGGGERY--SSLFGGGGGGDFRLYGGGGG 49
          G G + +GG  G   GG GGGG+R+     +GGGGGGD R  GGGGG
Sbjct: 20 GFGDESYGGYSG---GGFGGGGDRFGGGGGYGGGGGGD-RFGGGGGG 62


HSP 6 Score: 33.9 bits (76), Expect = 7.1e+01
Identity = 23/56 (41.07%), Postives = 26/56 (46.43%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGGGG------GGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           F GGGGG  FGGGG    G GG      G G+     F G  G  F +   GG D+
Sbjct: 80  FRGGGGGGGFGGGG----GRGGMPAQVIGEGKGIVKFFNGQKGFGFIVRDDGGEDV 131


HSP 7 Score: 63.5 bits (153), Expect = 8.3e-08
Identity = 33/55 (60.00%), Postives = 34/55 (61.82%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFG---------GGGGGDFRLYGGGGG 49
           GGGGG  FGGGGG + GGGGGGG RY    G         GGGGG  R YGGGGG
Sbjct: 87  GGGGGKEFGGGGGGY-GGGGGGGRRYDDRGGYGRGDNGRSGGGGGGGRSYGGGGG 140

[Close]
BLAST of Cucsa.079440 vs. TAIR10
Match: AT4G39260.1 (AT4G39260.1 cold, circadian rhythm, and RNA binding 1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-11
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGG 48
           GGGG + GGGGG + GGGGGG ER S  +G GGGG  R YGGGG
Sbjct: 104 GGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGG 147


HSP 2 Score: 48.5 bits (114), Expect = 1.4e-06
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDF------FGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
           + GGGGG + GGGGG +      +G GGGGG R     G GGGG     G GGGD
Sbjct: 109 YSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGR-----GYGGGGRREGGGYGGGD 158


HSP 3 Score: 41.6 bits (96), Expect = 1.7e-04
Identity = 22/36 (61.11%), Postives = 24/36 (66.67%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGG 39
           GGGGG    GGGG   GGG GGG+  S  +GGGGGG
Sbjct: 135 GGGGGGRGYGGGGRREGGGYGGGDGGS--YGGGGGG 168

[Close]
BLAST of Cucsa.079440 vs. TAIR10
Match: AT3G23450.1 (AT3G23450.1 unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-09
Identity = 28/46 (60.87%), Postives = 29/46 (63.04%), Query Frame = 1 

Query: 3  GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
          GGG G  FGGG G  FGGGGGGG       GGGGGG    +GGGGG
Sbjct: 61 GGGAGGGFGGGAGGGFGGGGGGG-------GGGGGGGGGGFGGGGG 99


HSP 2 Score: 52.0 bits (123), Expect = 1.3e-07
Identity = 28/47 (59.57%), Postives = 29/47 (61.70%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           FGGG G  FGGGGG   GGGGGGG      FGGGGG     +GGG G
Sbjct: 68  FGGGAGGGFGGGGGGGGGGGGGGG----GGFGGGGG-----FGGGHG 105


HSP 3 Score: 52.0 bits (123), Expect = 1.3e-07
Identity = 27/46 (58.70%), Postives = 27/46 (58.70%), Query Frame = 1 

Query: 3  GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
          GGG G  FGGG G   GGG GGG      FGGG GG F   GGGGG
Sbjct: 45 GGGFGGGFGGGAGGGVGGGAGGG------FGGGAGGGFGGGGGGGG 84


HSP 4 Score: 49.3 bits (116), Expect = 8.2e-07
Identity = 26/46 (56.52%), Postives = 28/46 (60.87%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGG   GGGGG  FGGGGG G  +    GGG GG    +GGG G
Sbjct: 79  GGGGGGGGGGGGGGGFGGGGGFGGGHGGGVGGGVGGG---HGGGVG 121


HSP 5 Score: 46.2 bits (108), Expect = 7.0e-06
Identity = 28/46 (60.87%), Postives = 28/46 (60.87%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGG-GDFRLYGGGGG 49
           GGGG  FGGGGG   GGG GGG      FGGGGG G     GGGGG
Sbjct: 379 GGGGG-FGGGGGFGKGGGIGGGIGKGGGFGGGGGFGKGGGIGGGGG 423


HSP 6 Score: 43.1 bits (100), Expect = 5.9e-05
Identity = 26/47 (55.32%), Postives = 27/47 (57.45%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           FG GGG   G GGG  FGGGGG G+      G G GG F   GGGGG
Sbjct: 368 FGKGGGIGGGIGGGGGFGGGGGFGKGGGIGGGIGKGGGF---GGGGG 411


HSP 7 Score: 42.7 bits (99), Expect = 7.7e-05
Identity = 26/49 (53.06%), Postives = 27/49 (55.10%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           FG GGG   GGG G   G GGGG       FGGGGGG     GGGGG +
Sbjct: 412 FGKGGGIGGGGGFGKGGGFGGGG-------FGGGGGGG----GGGGGGI 449


HSP 8 Score: 42.4 bits (98), Expect = 1.0e-04
Identity = 25/46 (54.35%), Postives = 25/46 (54.35%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           G GGG   GGG G   G GGGGG      FGGGG G     GGGGG
Sbjct: 401 GKGGGFGGGGGFGKGGGIGGGGGFGKGGGFGGGGFGGGGGGGGGGG 446


HSP 9 Score: 42.0 bits (97), Expect = 1.3e-04
Identity = 27/54 (50.00%), Postives = 28/54 (51.85%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGG-------GGGDFRLYGGGGG 49
           FG GGG   G G G  FGGGGG G+      GGG       GGG F   GGGGG
Sbjct: 390 FGKGGGIGGGIGKGGGFGGGGGFGKGGGIGGGGGFGKGGGFGGGGFGGGGGGGG 443


HSP 10 Score: 41.6 bits (96), Expect = 1.7e-04
Identity = 26/51 (50.98%), Postives = 27/51 (52.94%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGG-----GDFRLYGGGGG 49
           GGG G  FG GGG   G GGGGG      FG GGG     G    +GGGGG
Sbjct: 361 GGGIGGGFGKGGGIGGGIGGGGGFGGGGGFGKGGGIGGGIGKGGGFGGGGG 411


HSP 11 Score: 37.0 bits (84), Expect = 4.2e-03
Identity = 23/48 (47.92%), Postives = 24/48 (50.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           GGG G  FG GGG   G G GGG       GGG GG     GG GG +
Sbjct: 207 GGGVGGGFGKGGGVGGGIGKGGGVGGGFGKGGGVGGGIGKGGGIGGGI 254


HSP 12 Score: 37.0 bits (84), Expect = 4.2e-03
Identity = 23/48 (47.92%), Postives = 24/48 (50.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           GGG G  FG GGG   G G GGG       GGG GG     GG GG +
Sbjct: 117 GGGVGGGFGKGGGIGGGIGKGGGVGGGIGKGGGIGGGIGKGGGVGGGI 164


HSP 13 Score: 37.0 bits (84), Expect = 4.2e-03
Identity = 25/50 (50.00%), Postives = 26/50 (52.00%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGG---GGGDFRLYGGGGG 49
           FG GGG   GGG G   G GGGGG       GGG   GGG    +G GGG
Sbjct: 326 FGKGGG--IGGGIGKGGGIGGGGGFGKGGGIGGGIGKGGGIGGGFGKGGG 373


HSP 14 Score: 36.2 bits (82), Expect = 7.2e-03
Identity = 23/48 (47.92%), Postives = 24/48 (50.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           GGG G  FG GGG   G G GGG       GGG GG     GG GG +
Sbjct: 227 GGGVGGGFGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGGGI 274


HSP 15 Score: 35.0 bits (79), Expect = 1.6e-02
Identity = 25/49 (51.02%), Postives = 25/49 (51.02%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGG---GGGDFRLYGGGGG 49
           G GGG   GGG G   G GGGGG       GGG   GGG     GGGGG
Sbjct: 305 GKGGG--IGGGIGKGGGIGGGGGFGKGGGIGGGIGKGGG----IGGGGG 347

[Close]
BLAST of Cucsa.079440 vs. TAIR10
Match: AT5G40490.1 (AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-08
Identity = 27/46 (58.70%), Postives = 29/46 (63.04%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           G GGG + GGGG D  G GGGG   Y +  GG GGG F  YGGGGG
Sbjct: 363 GAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSF--YGGGGG 406


HSP 2 Score: 47.8 bits (112), Expect = 2.4e-06
Identity = 27/60 (45.00%), Postives = 31/60 (51.67%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDF-----------FGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           FGG GG  +GGG G +           +GGGGGG  R     GGGGG     YGGG GD+
Sbjct: 272 FGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGG-----YGGGPGDM 326


HSP 3 Score: 45.1 bits (105), Expect = 1.6e-05
Identity = 27/48 (56.25%), Postives = 29/48 (60.42%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
           FGGG GD +GGG G   GG GG G  Y S  GG GGG    YGG GG+
Sbjct: 228 FGGGYGDGYGGGHG---GGYGGPGGPYKS-GGGYGGGRSGGYGGYGGE 271


HSP 4 Score: 43.5 bits (101), Expect = 4.5e-05
Identity = 24/45 (53.33%), Postives = 27/45 (60.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGG 48
           G GGG  +GG GG +  GGG GG R      GG GG+F  YGGGG
Sbjct: 239 GHGGG--YGGPGGPYKSGGGYGGGRSGGY--GGYGGEFGGYGGGG 279


HSP 5 Score: 39.7 bits (91), Expect = 6.5e-04
Identity = 25/52 (48.08%), Postives = 27/52 (51.92%), Query Frame = 1 

Query: 10  FGGGGGDFFGGG-----GGGGERYSSLFGGGG---------GGDFRLYGGGG 48
           FGGG GD +GGG     GG G  Y S  G GG         GG+F  YGGGG
Sbjct: 228 FGGGYGDGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYGGYGGEFGGYGGGG 279

[Close]
BLAST of Cucsa.079440 vs. TAIR10
Match: AT2G05440.2 (AT2G05440.2 GLYCINE RICH PROTEIN 9)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-07
Identity = 28/47 (59.57%), Postives = 30/47 (63.83%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFG--GGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGG  +GGGGG + G  GG GGG  Y    GGGGGG    YGGGGG
Sbjct: 97  GGGGGHYGGGGGHYGGGGGGHGGGGHY----GGGGGG----YGGGGG 135

[Close]
BLAST of Cucsa.079440 vs. TAIR10
Match: AT2G32690.1 (AT2G32690.1 glycine-rich protein 23)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-07
Identity = 29/53 (54.72%), Postives = 30/53 (56.60%), Query Frame = 1 

Query: 2   FGGGGGDFFGG----GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGDL 51
           +GGG G   GG    GGG  FGGGGGGG      FGGG GG F    GGGG L
Sbjct: 145 YGGGAGGGLGGGGGIGGGGGFGGGGGGG------FGGGAGGGFGKGIGGGGGL 191


HSP 2 Score: 46.6 bits (109), Expect = 5.3e-06
Identity = 24/43 (55.81%), Postives = 25/43 (58.14%), Query Frame = 1 

Query: 4   GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGG 47
           GGGG F GGGGG F GG GGG   +    GGGGG      GGG
Sbjct: 160 GGGGGFGGGGGGGFGGGAGGG---FGKGIGGGGGLGGGYVGGG 199


HSP 3 Score: 44.7 bits (104), Expect = 2.0e-05
Identity = 27/49 (55.10%), Postives = 27/49 (55.10%), Query Frame = 1 

Query: 3   GGGGGDFFG---GGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGG   G   GGGG   GGGGGG      L GG GGG    YGGG G
Sbjct: 106 GGGGGLGGGSGLGGGGGLGGGGGGGLGGGGGLGGGAGGG----YGGGAG 150

[Close]
BLAST of Cucsa.079440 vs. NCBI nr
Match: gi|922546522|ref|XP_013601053.1| (PREDICTED: keratin, type II cytoskeletal 2 epidermal [Brassica oleracea var. oleracea])

HSP 1 Score: 67.8 bits (164), Expect = 6.3e-09
Identity = 32/50 (64.00%), Postives = 34/50 (68.00%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERY----SSLFGGGGGGDFRLYGGGGG 49
           GGGGG  FGGG G  +GGGGGGG RY    S  +GGGGGG    YGGGGG
Sbjct: 164 GGGGGGSFGGGSGGSYGGGGGGGGRYGGGGSDSYGGGGGGGGGRYGGGGG 213

[Close]
BLAST of Cucsa.079440 vs. NCBI nr
Match: gi|922546522|ref|XP_013601053.1| (PREDICTED: keratin, type II cytoskeletal 2 epidermal [Brassica oleracea var. oleracea])

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-05
Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1 

Query: 3   GGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGG  +GGGG D +GGGGGGG      +GGGGG     YGG GG
Sbjct: 182 GGGGGGRYGGGGSDSYGGGGGGG---GGRYGGGGGS----YGGDGG 220


HSP 2 Score: 67.4 bits (163), Expect = 8.3e-09
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
           +GGGGG + GGGGG + GGGGGGG R     GGGGGG +R  GGGGGD
Sbjct: 104 YGGGGGGYGGGGGGGYGGGGGGGGRRE----GGGGGGGYRGGGGGGGD 147

[Close]
BLAST of Cucsa.079440 vs. NCBI nr
Match: gi|860493397|ref|WP_048441326.1| (RNA-binding protein [Caenimonas sp. SL110])

HSP 1 Score: 55.1 bits (131), Expect = 4.2e-05
Identity = 29/47 (61.70%), Postives = 32/47 (68.09%), Query Frame = 1 

Query: 2   FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           +GGGGG  +GGGGG + GGGGGG   Y    GGGGGG  R  GGGGG
Sbjct: 96  YGGGGGGGYGGGGGGYGGGGGGG---YGG--GGGGGG--RREGGGGG 135


HSP 2 Score: 66.6 bits (161), Expect = 1.4e-08
Identity = 35/51 (68.63%), Postives = 35/51 (68.63%), Query Frame = 1 

Query: 1  FFGGGGGDFF--GGGGGDFFGGGGGGG--ERYSSLFGGGGGGDFRLYGGGG 48
          F GGGGGD F  GGGGGD FGGGGGGG        FGGGGGG FR  GGGG
Sbjct: 45 FGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSGGGGG 95

[Close]
BLAST of Cucsa.079440 vs. NCBI nr
Match: gi|398028263|gb|EJL21780.1| (cold shock protein [Novosphingobium sp. AP12])

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-05
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGG--GGDFRLYGGGGG 49
          F  G   F GGGGGD F GGGGGG+R+    GGGG  GG  R  GGGGG
Sbjct: 38 FFAGQDRFGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGG 86


HSP 2 Score: 55.8 bits (133), Expect = 2.5e-05
Identity = 32/54 (59.26%), Postives = 32/54 (59.26%), Query Frame = 1 

Query: 3   GGGGGDFFGG--------GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGGGD FGG        GGGD FGGGGGGG R     GGGG G     GGGGG
Sbjct: 57  GGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSG---GGGGFGGGPRGGGGGG 107


HSP 3 Score: 47.8 bits (112), Expect = 6.8e-03
Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 1 

Query: 5   GGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGD FGGGGG  F  GGGGG       GGGGG   ++ G G G
Sbjct: 75  GGGDRFGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 118


HSP 4 Score: 42.7 bits (99), Expect = 2.2e-01
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGG--GGGGGERYSSLFGGGGG 38
           F GGGGG F  GGGG F GG  GGGGG   + + G G G
Sbjct: 80  FGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 118


HSP 5 Score: 33.5 bits (75), Expect = 1.3e+02
Identity = 22/46 (47.83%), Postives = 23/46 (50.00%), Query Frame = 1 

Query: 4  GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
          G G D     G D F     G +R    FGGGGGGD    GGGGGD
Sbjct: 21 GRGRDKRDRFGEDEFDPFFAGQDR----FGGGGGGDRFSGGGGGGD 62


HSP 6 Score: 66.6 bits (161), Expect = 1.4e-08
Identity = 35/51 (68.63%), Postives = 35/51 (68.63%), Query Frame = 1 

Query: 1  FFGGGGGDFF--GGGGGDFFGGGGGGG--ERYSSLFGGGGGGDFRLYGGGG 48
          F GGGGGD F  GGGGGD FGGGGGGG        FGGGGGG FR  GGGG
Sbjct: 33 FGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSGGGGG 83

[Close]
BLAST of Cucsa.079440 vs. NCBI nr
Match: gi|738594606|ref|WP_036505161.1| (cold-shock protein [Novosphingobium sp. AP12])

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-05
Identity = 29/49 (59.18%), Postives = 31/49 (63.27%), Query Frame = 1 

Query: 2  FGGGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGG--GGDFRLYGGGGG 49
          F  G   F GGGGGD F GGGGGG+R+    GGGG  GG  R  GGGGG
Sbjct: 26 FFAGQDRFGGGGGGDRFSGGGGGGDRFGGGGGGGGFSGGGDRFGGGGGG 74


HSP 2 Score: 55.8 bits (133), Expect = 2.5e-05
Identity = 32/54 (59.26%), Postives = 32/54 (59.26%), Query Frame = 1 

Query: 3  GGGGGDFFGG--------GGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
          GGGGGD FGG        GGGD FGGGGGGG R     GGGG G     GGGGG
Sbjct: 45 GGGGGDRFGGGGGGGGFSGGGDRFGGGGGGGFRSG---GGGGFGGGPRGGGGGG 95


HSP 3 Score: 47.8 bits (112), Expect = 6.8e-03
Identity = 24/44 (54.55%), Postives = 26/44 (59.09%), Query Frame = 1 

Query: 5   GGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGG 49
           GGGD FGGGGG  F  GGGGG       GGGGG   ++ G G G
Sbjct: 63  GGGDRFGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 106


HSP 4 Score: 42.7 bits (99), Expect = 2.2e-01
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 1 

Query: 1   FFGGGGGDFFGGGGGDFFGG--GGGGGERYSSLFGGGGG 38
           F GGGGG F  GGGG F GG  GGGGG   + + G G G
Sbjct: 68  FGGGGGGGFRSGGGGGFGGGPRGGGGGGMPAQVVGQGRG 106


HSP 5 Score: 33.5 bits (75), Expect = 1.3e+02
Identity = 22/46 (47.83%), Postives = 23/46 (50.00%), Query Frame = 1 

Query: 4  GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGGGD 50
          G G D     G D F     G +R    FGGGGGGD    GGGGGD
Sbjct: 9  GRGRDKRDRFGEDEFDPFFAGQDR----FGGGGGGDRFSGGGGGGD 50


HSP 6 Score: 66.6 bits (161), Expect = 1.4e-08
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 1 

Query: 4  GGGGDFFGGGGGDFFGGGGGGGERYSSLFGGGGGGDFRLYGGGG 48
          GGGGD FGGGG  F GGGGGGG+R+    GGGGGG FR  GGGG
Sbjct: 41 GGGGDRFGGGGDRFGGGGGGGGDRFGG--GGGGGGGFRSGGGGG 82

The following BLAST results are available for this feature:
BLAST of Cucsa.079440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBG8_ARATH3.4e-1065.91Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1[more]
DED1_MAGO71.1e-0865.31ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4... [more]
DHX9_MOUSE1.8e-0865.31ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2[more]
CAZ_DROME7.0e-0862.50RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2 SV=2[more]
EGG2_SCHJA4.5e-0756.00Eggshell protein 2A OS=Schistosoma japonicum GN=ESG-2A PE=2 SV=1[more]
BLAST of Cucsa.079440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D3DXM7_BRAOL4.4e-0964.00Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A0D3DXM7_BRAOL1.3e-0558.70Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
J2FX37_9SPHN7.8e-0659.18Cold shock protein OS=Novosphingobium sp. AP12 GN=PMI02_04961 PE=4 SV=1[more]
B9DFJ8_ARATH2.8e-0349.09 protein OS=Arabidopsis thaliana GN=At4g39260 PE=2 SV=1[more]
A0A0Q8R4B6_9SPHN9.2e-0765.96Cold-shock protein OS=Sphingomonas sp. Root720 GN=ASE22_15570 PE=4 SV=1[more]
BLAST of Cucsa.079440 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39260.11.9e-1165.91 cold, circadian rhythm, and RNA binding 1[more]
AT3G23450.15.1e-0960.87 unknown protein[more]
AT5G40490.11.5e-0858.70 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G05440.21.3e-0759.57 GLYCINE RICH PROTEIN 9[more]
AT2G32690.11.7e-0754.72 glycine-rich protein 23[more]
BLAST of Cucsa.079440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|922546522|ref|XP_013601053.1|6.3e-0964.00PREDICTED: keratin, type II cytoskeletal 2 epidermal [Brassica oleracea var. ole... [more]
gi|922546522|ref|XP_013601053.1|1.9e-0558.70PREDICTED: keratin, type II cytoskeletal 2 epidermal [Brassica oleracea var. ole... [more]
gi|860493397|ref|WP_048441326.1|4.2e-0561.70RNA-binding protein [Caenimonas sp. SL110][more]
gi|398028263|gb|EJL21780.1|1.1e-0559.18cold shock protein [Novosphingobium sp. AP12][more]
gi|738594606|ref|WP_036505161.1|1.1e-0559.18cold-shock protein [Novosphingobium sp. AP12][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.079440.1Cucsa.079440.1mRNA