Cucsa.078590 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTTGTTCACGTGGTAAATGGGCTAAGCTACCAAAGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGGGATGAATTCCAATGGAACTTTGAAGACAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAAAAGCGGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCGAAGAACATTTGGCTTCGTGATAGATGCGGAAATCAATTAGGAACTTGTATTTGGATTGCTAAGGACGATGGAATTTATTTGAAAAACATGCTCACTAATTTTGATGAATTTGTTCACAAATGGATTCATAAGTAA ATATTTTGTTCACGTGGTAAATGGGCTAAGCTACCAAAGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGGGATGAATTCCAATGGAACTTTGAAGACAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAAAAGCGGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCGAAGAACATTTGGCTTCGTGATAGATGCGGAAATCAATTAGGAACTTGTATTTGGATTGCTAAGGACGATGGAATTTATTTGAAAAACATGCTCACTAATTTTGATGAATTTGTTCACAAATGGATTCATAAGTAA ATATTTTGTTCACGTGGTAAATGGGCTAAGCTACCAAAGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGGGATGAATTCCAATGGAACTTTGAAGACAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAAAAGCGGGATGCGTATGTCGCTTTTGAAAGCTTTTGGCCTGAGTCGAAGAACATTTGGCTTCGTGATAGATGCGGAAATCAATTAGGAACTTGTATTTGGATTGCTAAGGACGATGGAATTTATTTGAAAAACATGCTCACTAATTTTGATGAATTTGTTCACAAATGGATTCATAAGTAA YFVHVVNGLSYQSLDVHCQSKDDDLGYHHLVNHGDEFQWNFEDNFWGTTLFWCRLEKRDAYVAFESFWPESKNIWLRDRCGNQLGTCIWIAKDDGIYLKNMLTNFDEFVHKWIHK*
BLAST of Cucsa.078590 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.0e-24 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 1
BLAST of Cucsa.078590 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23 Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = 1
BLAST of Cucsa.078590 vs. TrEMBL
Match: B9S577_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.4e-21 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 1
BLAST of Cucsa.078590 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.3e-21 Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 1
BLAST of Cucsa.078590 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-21 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 1
BLAST of Cucsa.078590 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-16 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 1
BLAST of Cucsa.078590 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 80.9 bits (198), Expect = 5.8e-16 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 1
BLAST of Cucsa.078590 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11 Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 1
BLAST of Cucsa.078590 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 63.9 bits (154), Expect = 7.3e-11 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 1
BLAST of Cucsa.078590 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 61.2 bits (147), Expect = 4.8e-10 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 1
BLAST of Cucsa.078590 vs. NCBI nr
Match: gi|778730337|ref|XP_004139721.2| (PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.2e-65 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1
BLAST of Cucsa.078590 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]) HSP 1 Score: 230.3 bits (586), Expect = 1.7e-57 Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 1
BLAST of Cucsa.078590 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo]) HSP 1 Score: 229.9 bits (585), Expect = 2.2e-57 Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 1
BLAST of Cucsa.078590 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 2.7e-55 Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 1
BLAST of Cucsa.078590 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]) HSP 1 Score: 220.7 bits (561), Expect = 1.3e-54 Identity = 98/115 (85.22%), Postives = 104/115 (90.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |