CsaV3_7G025900 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G025900
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin-protein ligase PRT1
Location	chr7 : 15387170 .. 15393180 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGACTTCGACAAACCTATTCATCCAAAATATCTCTAAGCCAAACAAATCCAACCCATTTAGAGTTACTATTATGATCTTGATTTTGGTTGGTTACGGACTTGGCGTTCCGAGTAATTACAGGCTGCCATTTGACTCTAATCTGCTCTGTTAATCAGAGTCCCCCAGTTTCACGTTTCCCTCTATTCACCGCCATTTCTTTTCTCTCCTCCGATTCCCTTCTCAACATTCTCCTCAACCTTATCAATGGCGGAATATCAGATGCTTGACGATGTCGACGCCGACGCATTCCTCTGCTGTGTCTGCTTGTCAGCTCCCTCTCTCCCTCTCTCTTGTTTTACCTTCATTTTTGGAATCAAAATACGCCTTGGAATGATTTTTTGTTCGATGTTTGTATATATCTATGTGGGTTTCTTGTTTTGTTCTGATGGTTTATTGTTGAGGTTAGGAATTTGAACAATCAATTATTTTCAATGGCAAAGCTAATGATTTCTTGTTCTGGGTCATCTTCGATTCGCGATGTGCTTATATGTTAATAGCTATGCCGTGTATTTTACATGTTCGGTCTATACTTTCTTAAGAAGAGGCGAGGCTTTCAGGAAGGCTATCATTATTAAACGTTATTTCTCAAAATCCCATTTTGGGATGCCTAGTATTTTTCTATTTGCGTGAATTGCCCTATTCCTCGTTTGGCCCGAAAGTCACCTAGGTGGGTTGGTAAATAATAGAATTGGATAAAAAGGACTCGTTTCATTTTGTCAAAGCATTGTTGTCATCTATTGGATCCAAAGTGAACACTCGATGTAAACTTTTGAGTTGGGGTTGACTGGTTTTTAGCTATTCTTTCAAGAACCAGATGTGGCGTCCCACTCTAACTGATTCGGAAGCTCGAACCTACCCTAAGATTTAGACACTGAGAGACATCAAGGACTTTTTTGTTTTCTTATTAAGCTCACTCAATTGTTTGCATGCTCATTTGAAGTCATTGTAAAGTTTAGAAACAGTTGGCTTGATGTTAACTATTCTTTGGCTGAGGGATACATAGTAGAGTGGGACATTGCATTTGGAATTTGTTCATGTTCAATACTATGATAAATTGTAACCATCATAGGTTAGCTTAGTGGTAAAAAGGGAGACATAGTTTCAATAACTAACTTAGAGGTTATAGCTTCAATCCATGATGGTCATCTACCCAGAATTAATTTCTATGAGCTTTCTTGACATCCAAATGTTGTAGTGTCAGACGGTTATCCCACGCGAGATTAGTTGAGGTGCGTAAGCTGGCCCAAACACTCACATATATATAAGAAAATATACTAGCATAAATTGTAGGAATGACTTCAAATAACTAAAGAATGGATGGTCTATATCAATTCAGCTCTTTTCAAGATCTCAGTAATGACTTCAAACAAGCATTGACTAGTTTTCTTTTGATAAGATTTCTGCACGTATTGCCAAATAATGGAGGCCCCTTTCTATTGCATACTTTTTGTGCCTGAATTATGCCAAATAAATGTGTACATAGTAGGCAATTTCAATTTGTATAATTTATCTTCTAAGAGTCCCTTATCCAATAGGACTACAGTTCTAAACTGGGTTTTCCTAGATTTTGGAGGAAAGTTAAACTTTGAATTGACCATTACATGATCATGAGGTATTGGCTTATAGTATTATTAGAAACGAGAAACAACTGGGTGCAAGGAGGTTGTTTTATTCTGTTGTTTGTTGGTATTATTTGTCTTCACCAGTTTCTTCTTCATATGGCTAATTTAAGTTGGTTGTGAATTGCAGGGATCTTCTCTACAAGCCTATAGTGCTCCGTGAGTATAATTAGATGTTGACCATACATTTTTTTGAGAGGTGTCATCCTTTTGTTAATTTTTAGTTTCTTCTATTCCAGCTTGTGGTCATATTTCATGTTTTTGGTGCGTGCACAAATGCATGAATGGCTTTCGTGAGTCCCACTGTCCAATTTGTAGACGTTCATATTATCACTTTCCTACCATCTGTGAGATTCTTCACCAATTGATCCTGAAGATTTATCCCGCATCCTATAAGAGAAGGGAAAGTCAAATTCTAGGTGAGCTTTCTAGTGGATGCTGTTATCACTAATGTGCTAATGTCTGCAACGGCTGCAATCATGGCTGTTAAAAACAATATTATATGACTGAGGTGTAATGGTTTTAGCTTTGAATCTGTTAAGTGTCTACTCCACCTGCAGTCAGTAAAACCCAACGAAAAGTAGAGCAAAGAACAGGGAAAGTCGATCCCTGTTATGATGATGTATTTAAATGCCAATGAGATCAAAGTTGCAAAGCCAGAATAACACAAAGAACTGGCTTGAAAATGGGCTTATCTATTTAATGTACAAGGGAACACATCTTTTTGAGCCGCTTATCTATCTAGTGTACCTGTTTTTTATATTTTCTTGACAAGACTGCTAGTGCCCTTGCTGTATTCCTTGATTAATTTAATAATTTGTAAGATTTATCTTGTCTTCCATCTTTCAGATTATTTATTTTTTGCTTAATTCTTTTTATCAATGATAATAATGTTTCATAATGAAAAAACTAATTAGAATGCAGAATGCTAATGATCCATTACTTTTTGCGTTTGATATTAAATATTAATTGTGTTAAAATACACATAAATCTCAAACATATTGTTTAATTGATGGAACTGTATTCATGAAAATGATATTTTCTTAATGTCGGTTCAACAAATGAGTAGTCATTCATTGTCTATTTTCTTCAAATTTTTTGGTAGAGTTATTTTAACCTTGTCACCATTTAAATGATTTTCATTTTCAGAGGTGGAAAAGAAAATTGGATTTTTCTCTCCACAATTTGATTCCCTTGCTTGTGGCTCCCAAGCTGGTATGAAAGTGGAACACTTAGAAGATTCTGCTAATGGCGAGCTGAACACAAATACCAAAAATGATGACGCTGTTGCTGAATTAATATTAGAAGAAAATTCTGACGTTGTTAGTTCTACTTCTGTTGTAAGCCTCAATTCTCTTCAAGATCCTTGTGCTCAAAAGACTCAAAATCAGGAGAAAATTTCAGTTGCTGATGTGCTATGTCAAGCTTGCACCCAATTGCTCTTCCGACCTGTGGTTATGAACTGTGGCCATGGTATATATTCTTTTTTTTCATCCCTGTGTGAGCTCGCATTCTATTTTACCTTCAGTTATGTAGTAAAAGTATTTGTTTAAGTATCGGTTTATTTCATTTTTCAACTTTACTACCATTCCCAAAATATGTTGACTTCAATGCCATAAATTAAAAGGTTTCAATATAACTTATTTTCTTATGTTTATAGTATTTTGTGAGAGTTGTATCAACTCACAAGTTGAGACACTTGAGTGCCAAGTTTGTCAGTCGCTGCAACCAAGGGGATTTCGAAATGTGTGTTTGGAGCTTGATCAGTTTTTGAAGGAAAAATTTCCTGAAGAATATAGCATCCGCAGAGACTCAGTTCAACTTAAACTAGCCAACAGTATGAAGCATGACAATCCAACTTCCTGTATGTTTGTTTACACTTGCTTAAATAATCGTTTTTAATATTGTTGCATTTGTGTTATTGGATTAATCTATTTTGTTGCTTTTAGTTCTTGGTATTTGTTACATTCTTCTTCTTTTTTTCTTAATTTCTAGTTCACGTATTTATTGCACTTTTGTTTGTGCGGACGAAGGTAGTTTAGCTGTCCAAACTATGTAATTGTTAGAGGTTGTAGGAAAATTTCTTTGTGAATGATTTTGAATGATCGTATCCATTTATTTCTGGTATTTCTACATCATCTTTGAAGTGATGGAATGATTCATTCAAAATGGAAAATGTACTTATAATGCTTTTTAAAACATTATTTCTGGTATTTCTACATCATCTCCGAAAACCCGCATCATATTATCAAAATTTACTAATGTTTTTAGGTCCATTTATCTGATAGCAGGGCTGTTCTACTACCATCCATGCTCTATTCATTTCTTTCGTATTGGTAATTTCAGGAAAACAAGATATTGTACACATGTAGGAATTTTGAAATAATTGTGTTATTTACAATTGTATTCTTCAATCCTTTTGGTAAGGGTAGAAATGTACTTATAATACTTGATGGCGTACTGTTGCTCTACAATATTGTAAATGCTTCATTAACACAAACTAGTCTGTATAATATCATTTTGGTTTATTTACGTTTATTATTTGCTTCCAGGTTCCAATGAAGAGGGTAAAAAGGGAGAGTACCTGCCAAGATGGGGTGATGTTGCCTCTAAAGTGCATACTTTTATTGGCTGTGATTATTGTGGGGTAATTTCCTTATATGTTCACCATTCTTATCATGCTGTCAATGTTGTTAAAAGGCTATTTAGTGTAGCCTAGTGATAAAAGGAGATCAATAAAACCAAAGTCTTTTTTATGGATCAAAATTTATCAATACCAAAAGATAATCCATTTATTTATGGAGAATAGGAAAACAAGGTAATCCTAATCCAAATTTATGAAAAAAAGTAATCCTAAACCTAACTAATGAAGGAAATTAATCCGTATCCTAATCAATCAAGGGAACTTATCCTAATTCTAATTAATCAAGGATTGTAATCTGATAGACCTCCTATCGTTCACCAATACAGTAGAAGAGGAAAGAAGGCTAAGGATGGCACGTGCGGATGAAGGAGTCTGTTAGTAAAGAGGTCTGTTAGCAGTCTGTTAAGTAAAGAGGCAGTTAGAAGAATGGGTATAAATAGATTGTGTTTTAGGAGGGAAAGTTAGTTAAGATCTTGGTAGAGAGAGAAGTCATCTATGCACCTTTGGAAGACAAGGTAACAGAGAGAGAGTGAGGAAGACTGTAATCGAATTGAGAAATTCTCAATTTGATCTTTTCATACTATTGATTCTTGTATTCTGTTCAGACACTATTACATCAATAAAGTTCTATTGATTGAACTCAAGTTCGGGTCCCAACATAATCACTCCCAAACATGGCCTTACCTAATAAAATAGTTGCATTTCATACACCATGGACTTGGTGAATAGATATATGGAGATTTAACATAATGTCTCATATGAGGATAACCTATAACTCTTCTGCCTGAACTAAAAATTGGATCCAAATATTGAAACTAGTTTGCTGACTAGAATTTGATTACCAGGTGCTCACTTTGTTATTCTTTTGTTATACACTGCAGATGTTTCCCCTCATTGGCGACAGATACAAGTGCAAGGATTGTTTAGAGGCATCAGGTTTTGATCTCTGTGGTGACTGCTACAATACACGTTCAAAACGTCCCGGTCGGTTTAACCAGCAACATAGACCAGAACACAGGTTCCAGCTTGTACATCCTTCAATGTTTCAAAATATGACGGAGGGGTAGTGACAGAAATGTTAGAGGAAGGTTCTACAACCTTTATTATTGCTGATGGTGAAGGTTCAGATAGCTCAGATAACATAGGTGCAATTCTCGAATTTTCGAGCGATGATCGTGAGAGTGATGAGGATGATTCCGACGTGGATGGTAGAACTCAAACAAACTCCAATGACAATAGAACTGATCAAAATCACTCTGAACCCACCTAAAATGTTAAAATATCTGGAATCAAAATACAACATTGCTTCGTATGGAGTTTCCACTCTGGTTTTCGGAACACGACCTCTTTCTCTAGTGTGTGGATGATTCATAAACTGAAATTTCTATGTTTTTTTACGAGGGAAGATGATAAAAGAGGCATAAAAGACCTCACATCAATGTACATAAAAGTGTCCTCTAATCCTCTTCAAAATTCAGCTGCTTCCTCTTCCTCTTGAATTTGAACAAACAGTGGAGTCATCTGAGGTTGGTTTCTTCTTATAATTAGCTACAGCCAACTTGTAAGTATATTAATGGTGGTGGTTTATTCAAATAACATTTTCTGAGCAAACTTCGAAAATGAGCTTTCATTTTAGTTTTTAGTGTTATTGCACAAAGAGTTATTATCAGGTGATATTATTGATTATGTTTTAGATGTTTCAACTTT

mRNA sequence

ATGGCGGAATATCAGATGCTTGACGATGTCGACGCCGACGCATTCCTCTGCTGTGTCTGCTTGGATCTTCTCTACAAGCCTATAGTGCTCCCTTGTGGTCATATTTCATGTTTTTGGTGCGTGCACAAATGCATGAATGGCTTTCGTGAGTCCCACTGTCCAATTTGTAGACGTTCATATTATCACTTTCCTACCATCTGTGAGATTCTTCACCAATTGATCCTGAAGATTTATCCCGCATCCTATAAGAGAAGGGAAAGTCAAATTCTAGAGGTGGAAAAGAAAATTGGATTTTTCTCTCCACAATTTGATTCCCTTGCTTGTGGCTCCCAAGCTGGTATGAAAGTGGAACACTTAGAAGATTCTGCTAATGGCGAGCTGAACACAAATACCAAAAATGATGACGCTGTTGCTGAATTAATATTAGAAGAAAATTCTGACGTTGTTAGTTCTACTTCTGTTGTAAGCCTCAATTCTCTTCAAGATCCTTGTGCTCAAAAGACTCAAAATCAGGAGAAAATTTCAGTTGCTGATGTGCTATGTCAAGCTTGCACCCAATTGCTCTTCCGACCTGTGGTTATGAACTGTGGCCATGTATTTTGTGAGAGTTGTATCAACTCACAAGTTGAGACACTTGAGTGCCAAGTTTGTCAGTCGCTGCAACCAAGGGGATTTCGAAATGTGTGTTTGGAGCTTGATCAGTTTTTGAAGGAAAAATTTCCTGAAGAATATAGCATCCGCAGAGACTCAGTTCAACTTAAACTAGCCAACAGTATGAAGCATGACAATCCAACTTCCTGTTCCAATGAAGAGGGTAAAAAGGGAGAGTACCTGCCAAGATGGGGTGATGTTGCCTCTAAAGTGCATACTTTTATTGGCTGTGATTATTGTGGGATGTTTCCCCTCATTGGCGACAGATACAAGTGCAAGGATTGTTTAGAGGCATCAGGTTTTGATCTCTGTGGTGACTGCTACAATACACGTTCAAAACGTCCCGGTCGGTTTAACCAGCAACATAGACCAGAACACAGGTTCCAGCTTGTACATCCTTCAATGTTTCAAAATATGACGGAGGGGTAG

Coding sequence (CDS)

ATGGCGGAATATCAGATGCTTGACGATGTCGACGCCGACGCATTCCTCTGCTGTGTCTGCTTGGATCTTCTCTACAAGCCTATAGTGCTCCCTTGTGGTCATATTTCATGTTTTTGGTGCGTGCACAAATGCATGAATGGCTTTCGTGAGTCCCACTGTCCAATTTGTAGACGTTCATATTATCACTTTCCTACCATCTGTGAGATTCTTCACCAATTGATCCTGAAGATTTATCCCGCATCCTATAAGAGAAGGGAAAGTCAAATTCTAGAGGTGGAAAAGAAAATTGGATTTTTCTCTCCACAATTTGATTCCCTTGCTTGTGGCTCCCAAGCTGGTATGAAAGTGGAACACTTAGAAGATTCTGCTAATGGCGAGCTGAACACAAATACCAAAAATGATGACGCTGTTGCTGAATTAATATTAGAAGAAAATTCTGACGTTGTTAGTTCTACTTCTGTTGTAAGCCTCAATTCTCTTCAAGATCCTTGTGCTCAAAAGACTCAAAATCAGGAGAAAATTTCAGTTGCTGATGTGCTATGTCAAGCTTGCACCCAATTGCTCTTCCGACCTGTGGTTATGAACTGTGGCCATGTATTTTGTGAGAGTTGTATCAACTCACAAGTTGAGACACTTGAGTGCCAAGTTTGTCAGTCGCTGCAACCAAGGGGATTTCGAAATGTGTGTTTGGAGCTTGATCAGTTTTTGAAGGAAAAATTTCCTGAAGAATATAGCATCCGCAGAGACTCAGTTCAACTTAAACTAGCCAACAGTATGAAGCATGACAATCCAACTTCCTGTTCCAATGAAGAGGGTAAAAAGGGAGAGTACCTGCCAAGATGGGGTGATGTTGCCTCTAAAGTGCATACTTTTATTGGCTGTGATTATTGTGGGATGTTTCCCCTCATTGGCGACAGATACAAGTGCAAGGATTGTTTAGAGGCATCAGGTTTTGATCTCTGTGGTGACTGCTACAATACACGTTCAAAACGTCCCGGTCGGTTTAACCAGCAACATAGACCAGAACACAGGTTCCAGCTTGTACATCCTTCAATGTTTCAAAATATGACGGAGGGGTAG

Protein sequence

MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG

Homology

[Close]

BLAST of CsaV3_7G025900 vs. NCBI nr
Match: XP_004139635.1 (PREDICTED: E3 ubiquitin-protein ligase PRT1 [Cucumis sativus] >KGN44590.1 hypothetical protein Csa_7G339130 [Cucumis sativus])

HSP 1 Score: 756.5 bits (1952), Expect = 4.1e-215
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 60
           MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY
Sbjct: 1   MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 60

Query: 61  YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE 120
           YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE
Sbjct: 61  YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE 120

Query: 121 DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL 180
           DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL
Sbjct: 121 DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL 180

Query: 181 CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 240
           CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF
Sbjct: 181 CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 240

Query: 241 PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF 300
           PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF
Sbjct: 241 PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF 300

Query: 301 PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG 360
           PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG
Sbjct: 301 PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG 359

[Close]

BLAST of CsaV3_7G025900 vs. NCBI nr
Match: XP_008457982.1 (PREDICTED: E3 ubiquitin-protein ligase PRT1 isoform X1 [Cucumis melo])

HSP 1 Score: 686.8 bits (1771), Expect = 4.0e-194
Identity = 327/363 (90.08%), Postives = 341/363 (93.94%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MAEYQMLDDVDAD    AFLCCVCLDLL+KPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 76  MAEYQMLDDVDADDIPHAFLCCVCLDLLHKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 135

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICEILHQLI+KIYP +YKRRE+QILE EKKIG+FSPQFDSLACGSQAGMKV
Sbjct: 136 RRPYYHFPTICEILHQLIVKIYPTAYKRREAQILEEEKKIGYFSPQFDSLACGSQAGMKV 195

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGELNTNTKN DA+AELILEENSDVVSSTSVVSLNSLQDPCAQKTQ QEKISV
Sbjct: 196 EHLEDSANGELNTNTKNGDAIAELILEENSDVVSSTSVVSLNSLQDPCAQKTQKQEKISV 255

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLCQACTQLLFRPVV+NCGHVFCESCINSQVETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 256 ADVLCQACTQLLFRPVVINCGHVFCESCINSQVETLECQVCQSLQPRGFPNVCLELDQFL 315

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDY 300
           KE+FPEEYSIRRDSVQL+ ANS+KHDNPTSCS EEGKKG+YLPRWGDVASKVH+ +GCD 
Sbjct: 316 KEQFPEEYSIRRDSVQLEQANSIKHDNPTSCSIEEGKKGQYLPRWGDVASKVHSAVGCDS 375

Query: 301 CGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNM 360
           CGMFPLIGDRYKCKDCLE  GFDLCGDCYNTRSKRPGRFNQQHRPEHRF LVHP MF+NM
Sbjct: 376 CGMFPLIGDRYKCKDCLEEVGFDLCGDCYNTRSKRPGRFNQQHRPEHRFHLVHPPMFRNM 435

[Close]

BLAST of CsaV3_7G025900 vs. NCBI nr
Match: XP_023515020.1 (E3 ubiquitin-protein ligase PRT1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.0 bits (1525), Expect = 1.3e-165
Identity = 276/360 (76.67%), Postives = 313/360 (86.94%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MA+ +MLDDVD+D    AFLCCVCLDLLYKPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 34  MADSKMLDDVDSDDIPHAFLCCVCLDLLYKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 93

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICE+LH LILK+YP +YKRR++Q LE E+K+G FSPQ+DSLACGS+AG K+
Sbjct: 94  RRPYYHFPTICEMLHLLILKMYPMAYKRRQNQTLEEERKLGLFSPQYDSLACGSRAGEKI 153

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGE+N NTKND+ VAELILEENS+VV S SV  LNSL D   Q TQNQE ++V
Sbjct: 154 EHLEDSANGEMNANTKNDNVVAELILEENSEVVRSASVEILNSLGDLHGQNTQNQETVTV 213

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLC+ACTQLL RPVV+NCGH FCESCIN +VETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 214 ADVLCRACTQLLLRPVVLNCGHAFCESCINLRVETLECQVCQSLQPRGFPNVCLELDQFL 273

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDY 300
           KE+ PEEY +R DSVQLKLA + KH++PTSCS+E GKKG+ LPRW +VASKVH  +GCD 
Sbjct: 274 KEQLPEEYKLRSDSVQLKLAETFKHESPTSCSSEGGKKGQGLPRWDEVASKVHPAVGCDS 333

Query: 301 CGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNM 357
           CGM+P+IGDRYKC+DC E  GFDLCG+CYNTRSKRPGRFNQQHRPEH+F+LV P+MF  M
Sbjct: 334 CGMYPIIGDRYKCEDCFEEVGFDLCGECYNTRSKRPGRFNQQHRPEHKFKLVLPTMFSTM 393

[Close]

BLAST of CsaV3_7G025900 vs. NCBI nr
Match: XP_023005016.1 (E3 ubiquitin-protein ligase PRT1 [Cucurbita maxima] >XP_023005017.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita maxima])

HSP 1 Score: 591.7 bits (1524), Expect = 1.7e-165
Identity = 276/360 (76.67%), Postives = 313/360 (86.94%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MA+ +MLDDVD+D    AFLCCVCLDLLYKPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 34  MADSKMLDDVDSDDIPHAFLCCVCLDLLYKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 93

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICE+LH LILK+YP +YKRR++Q LE E+K+G FSPQ+DSLACGS+AG K+
Sbjct: 94  RRPYYHFPTICEMLHLLILKMYPMAYKRRQNQTLEEERKLGLFSPQYDSLACGSRAGEKM 153

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGE+N NTKND+ VAELILEENS+VV S SV  LNSL D   QKTQNQE ++V
Sbjct: 154 EHLEDSANGEMNANTKNDNVVAELILEENSEVVRSASVEILNSLGDLHGQKTQNQETVTV 213

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLC+ACTQLL RPVV+NCGH FCESCIN +VETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 214 ADVLCRACTQLLLRPVVLNCGHAFCESCINLRVETLECQVCQSLQPRGFPNVCLELDQFL 273

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDY 300
           KE+ PEEY +R DSVQLKLA + KH++PTSCS+E G KG+ LPRW +VASKVH  +GCD 
Sbjct: 274 KEQLPEEYKLRSDSVQLKLAETFKHESPTSCSSEGGMKGQGLPRWDEVASKVHPAVGCDS 333

Query: 301 CGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNM 357
           CGM+P+IGDRYKC+DC E  GFDLCG+CYNTRSKRPGRFNQQHRPEH+F+LV P+MF  M
Sbjct: 334 CGMYPIIGDRYKCEDCFEEVGFDLCGECYNTRSKRPGRFNQQHRPEHKFKLVFPTMFSTM 393

[Close]

BLAST of CsaV3_7G025900 vs. NCBI nr
Match: XP_022960374.1 (E3 ubiquitin-protein ligase PRT1 [Cucurbita moschata])

HSP 1 Score: 590.1 bits (1520), Expect = 5.0e-165
Identity = 277/361 (76.73%), Postives = 314/361 (86.98%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MA+ +MLDDVD+D    AFLCCVCLDLLYKPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 34  MADSKMLDDVDSDDIPHAFLCCVCLDLLYKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 93

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICE+LH LILK+YP +YKRR++Q LE E+K+G FSPQ+DSLACGS+AG K+
Sbjct: 94  RRPYYHFPTICEMLHLLILKMYPMAYKRRQNQTLEEERKLGLFSPQYDSLACGSRAGEKI 153

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGE+N NTKND+ VAELILEENS+VV S SV  LNSL D   Q TQNQE ++V
Sbjct: 154 EHLEDSANGEMNANTKNDNVVAELILEENSEVVRSASVEILNSLGDLHGQNTQNQETVTV 213

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLC+ACTQLL RPVV+NCGH FCESCIN +VETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 214 ADVLCRACTQLLLRPVVLNCGHAFCESCINLRVETLECQVCQSLQPRGFPNVCLELDQFL 273

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEE-GKKGEYLPRWGDVASKVHTFIGCD 300
           KE+ PEEY +R DSVQLKLA + KH++PTSCS+EE GKKG+ LPRW +VASKVH  +GCD
Sbjct: 274 KEQLPEEYKLRSDSVQLKLAETFKHESPTSCSSEEGGKKGQGLPRWDEVASKVHPAVGCD 333

Query: 301 YCGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQN 357
            CGM+P+IGDRYKC+DC E  GFDLCG+CYNTRSKRPGRFNQQHRPEH+F+LV P+MF  
Sbjct: 334 SCGMYPIIGDRYKCEDCFEEVGFDLCGECYNTRSKRPGRFNQQHRPEHKFKLVLPTMFST 393

[Close]

BLAST of CsaV3_7G025900 vs. TAIR10
Match: AT3G24800.1 (proteolysis 1)

HSP 1 Score: 322.0 bits (824), Expect = 4.6e-88
Identity = 166/353 (47.03%), Postives = 223/353 (63.17%), Query Frame = 0


Query: 13  DAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILHQ 72
           D FLCCVCL+LLYKPIVL CGH+SCFWCVHK MNGFRESHCPICR  Y HFP++C+ L+ 
Sbjct: 22  DQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYVHFPSVCQKLYF 81

Query: 73  LILKIYPASYKRRESQILEVEKKIGFFSPQFD-----SLACGSQAGM----KVEHLEDSA 132
           L+ K+YP ++K+RE Q+L+ E++   FSPQ D     S+  G    +    KVE   ++A
Sbjct: 82  LLKKMYPLAHKKREEQVLKEEQERECFSPQIDLVLDLSVCSGDSLNVSDKQKVEECSNAA 141

Query: 133 NGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVLCQA 192
           N   +++++ D       + +N +    T   +LN  ++   +  +  ++IS  D+LC A
Sbjct: 142 NLLSSSSSRGDIP----CIPKNQE---PTDAKALNVHENELLKDNKVSKQISKDDLLCSA 201

Query: 193 CTQLLFRPVVMNCGHVFCESCI---NSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 252
           C +LL RPVV+NCGHV+CE C+     + E ++CQ C    PRGF  VCL L+Q L+E F
Sbjct: 202 CKELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQECNVCDPRGFPKVCLILEQLLEENF 261

Query: 253 PEEYSIRRDSVQLKLANSMKHD------NPTSCSNEEGKKGEYLPRWGDVASKVHTFIGC 312
           PEEY+ R   VQ  LA++ K +         S SN+      +L   G   S VH   GC
Sbjct: 262 PEEYNSRSSKVQKTLAHNSKGNIQSYLKEGPSLSNDNNNDDPWLANPG---SNVHFGAGC 321

Query: 313 DYCGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQL 348
           D CG++P+IGDRY+CKDC E  G+DLC DCY T SK PGRFNQQH P+HR +L
Sbjct: 322 DSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRLEL 364

[Close]

BLAST of CsaV3_7G025900 vs. TAIR10
Match: AT2G42030.1 (RING/U-box superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06
Identity = 23/78 (29.49%), Postives = 39/78 (50.00%), Query Frame = 0


Query: 11  DADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEIL 70
           D   F C +CLDL   P+V  CGH+ C+ C+++ +       CP+C+          E+ 
Sbjct: 135 DGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKECPVCKG---------EVS 194

Query: 71  HQLILKIYPASYKRRESQ 89
            + +  IY    ++RES+
Sbjct: 195 VKTVTPIYGRGIQKRESE 203

[Close]

BLAST of CsaV3_7G025900 vs. TAIR10
Match: AT4G03510.1 (RING membrane-anchor 1)

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06
Identity = 23/64 (35.94%), Postives = 34/64 (53.12%), Query Frame = 0


Query: 8   DDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMN--GF-------RESHCPICRR 63
           DD D   F C +CLD + +P+V  CGH+ C+ C+HK ++   F       R   CP+C+ 
Sbjct: 39  DDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKS 98

[Close]

BLAST of CsaV3_7G025900 vs. TAIR10
Match: AT1G04020.1 (breast cancer associated RING 1)

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 17 CCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 61
          C +CL LL +P++LPC H+ C  CVHK  +   ES CP+C+  +
Sbjct: 25 CPLCLKLLNRPVLLPCDHVFCDSCVHK--SSQVESGCPVCKSKH 66

[Close]

BLAST of CsaV3_7G025900 vs. TAIR10
Match: AT1G74990.1 (RING/U-box superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05
Identity = 20/51 (39.22%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 8  DDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRES-HCPICR 58
          +D  ++ F C +CL+L  +PIV  CGH+ C+ C++K ++   +S HCP+C+
Sbjct: 10 EDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCK 60

[Close]

BLAST of CsaV3_7G025900 vs. Swiss-Prot
Match: sp|Q8LBL5|PRT1_ARATH (E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana OX=3702 GN=PRT1 PE=2 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 8.4e-87
Identity = 166/353 (47.03%), Postives = 223/353 (63.17%), Query Frame = 0


Query: 13  DAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILHQ 72
           D FLCCVCL+LLYKPIVL CGH+SCFWCVHK MNGFRESHCPICR  Y HFP++C+ L+ 
Sbjct: 22  DQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYVHFPSVCQKLYF 81

Query: 73  LILKIYPASYKRRESQILEVEKKIGFFSPQFD-----SLACGSQAGM----KVEHLEDSA 132
           L+ K+YP ++K+RE Q+L+ E++   FSPQ D     S+  G    +    KVE   ++A
Sbjct: 82  LLKKMYPLAHKKREEQVLKEEQERECFSPQIDLVLDLSVCSGDSLNVSDKQKVEECSNAA 141

Query: 133 NGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVLCQA 192
           N   +++++ D       + +N +    T   +LN  ++   +  +  ++IS  D+LC A
Sbjct: 142 NLLSSSSSRGDIP----CIPKNQE---PTDAKALNVHENELLKDNKVSKQISKDDLLCSA 201

Query: 193 CTQLLFRPVVMNCGHVFCESCI---NSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 252
           C +LL RPVV+NCGHV+CE C+     + E ++CQ C    PRGF  VCL L+Q L+E F
Sbjct: 202 CKELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQECNVCDPRGFPKVCLILEQLLEENF 261

Query: 253 PEEYSIRRDSVQLKLANSMKHD------NPTSCSNEEGKKGEYLPRWGDVASKVHTFIGC 312
           PEEY+ R   VQ  LA++ K +         S SN+      +L   G   S VH   GC
Sbjct: 262 PEEYNSRSSKVQKTLAHNSKGNIQSYLKEGPSLSNDNNNDDPWLANPG---SNVHFGAGC 321

Query: 313 DYCGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQL 348
           D CG++P+IGDRY+CKDC E  G+DLC DCY T SK PGRFNQQH P+HR +L
Sbjct: 322 DSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRLEL 364

[Close]

BLAST of CsaV3_7G025900 vs. Swiss-Prot
Match: sp|Q9NZS9|BFAR_HUMAN (Bifunctional apoptosis regulator OS=Homo sapiens OX=9606 GN=BFAR PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-05
Identity = 24/80 (30.00%), Postives = 37/80 (46.25%), Query Frame = 0


Query: 10  VDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEI 69
           +    F C  C D+L  P  L CGH  C  C+       +++ CP CR  +  FP +  +
Sbjct: 27  ISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPKVSIL 86

Query: 70  LHQLILKIYPASYKRRESQI 90
           L   I K++P + + R   I
Sbjct: 87  LRDAIEKLFPDAIRLRFEDI 106

[Close]

BLAST of CsaV3_7G025900 vs. Swiss-Prot
Match: sp|Q5PQN2|BFAR_RAT (Bifunctional apoptosis regulator OS=Rattus norvegicus OX=10116 GN=Bfar PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-05
Identity = 25/80 (31.25%), Postives = 36/80 (45.00%), Query Frame = 0


Query: 10  VDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEI 69
           +    F C  C D L  P  L CGH  C  C+       +++ CP CR  +  FP +  +
Sbjct: 27  ISVSEFSCHCCYDTLVNPTTLNCGHSFCRHCLALWWMSSKKTECPECREKWEGFPKVNIL 86

Query: 70  LHQLILKIYPASYKRRESQI 90
           L   I K++P + K R   I
Sbjct: 87  LRDAIEKLFPDAIKMRVEDI 106

[Close]

BLAST of CsaV3_7G025900 vs. Swiss-Prot
Match: sp|Q1L5Z9|LONF2_HUMAN (LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens OX=9606 GN=LONRF2 PE=2 SV=3)

HSP 1 Score: 51.2 bits (121), Expect = 2.8e-05
Identity = 18/48 (37.50%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 10  VDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICR 58
           +D   F C +C+ LL++P+  PCGH  C  C+ +C++     HCP+C+
Sbjct: 442 LDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAPHCPLCK 487

[Close]

BLAST of CsaV3_7G025900 vs. Swiss-Prot
Match: sp|Q496Y0|LONF3_HUMAN (LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens OX=9606 GN=LONRF3 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.6e-05
Identity = 29/111 (26.13%), Postives = 47/111 (42.34%), Query Frame = 0


Query: 7   LDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICR--------- 66
           L   DA    C +C+ L Y+P+  PCGH  C  C+ +C++    + CP+C+         
Sbjct: 457 LASFDASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLD--HNAKCPLCKDGLSQCLAS 516

Query: 67  RSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLAC 109
           R Y    +   I+ +LI K  P   K R     E  +++   +       C
Sbjct: 517 RKY----SKNVIMEELIAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVC 561

[Close]

BLAST of CsaV3_7G025900 vs. TrEMBL
Match: tr|A0A0A0K4I8|A0A0A0K4I8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G339130 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 2.7e-215
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 60
           MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY
Sbjct: 1   MAEYQMLDDVDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 60

Query: 61  YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE 120
           YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE
Sbjct: 61  YHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLE 120

Query: 121 DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL 180
           DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL
Sbjct: 121 DSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVL 180

Query: 181 CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 240
           CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF
Sbjct: 181 CQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKF 240

Query: 241 PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF 300
           PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF
Sbjct: 241 PEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMF 300

Query: 301 PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG 360
           PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG
Sbjct: 301 PLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNMTEG 359

[Close]

BLAST of CsaV3_7G025900 vs. TrEMBL
Match: tr|A0A1S3C815|A0A1S3C815_CUCME (E3 ubiquitin-protein ligase PRT1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497542 PE=4 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 2.6e-194
Identity = 327/363 (90.08%), Postives = 341/363 (93.94%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MAEYQMLDDVDAD    AFLCCVCLDLL+KPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 76  MAEYQMLDDVDADDIPHAFLCCVCLDLLHKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 135

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICEILHQLI+KIYP +YKRRE+QILE EKKIG+FSPQFDSLACGSQAGMKV
Sbjct: 136 RRPYYHFPTICEILHQLIVKIYPTAYKRREAQILEEEKKIGYFSPQFDSLACGSQAGMKV 195

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGELNTNTKN DA+AELILEENSDVVSSTSVVSLNSLQDPCAQKTQ QEKISV
Sbjct: 196 EHLEDSANGELNTNTKNGDAIAELILEENSDVVSSTSVVSLNSLQDPCAQKTQKQEKISV 255

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLCQACTQLLFRPVV+NCGHVFCESCINSQVETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 256 ADVLCQACTQLLFRPVVINCGHVFCESCINSQVETLECQVCQSLQPRGFPNVCLELDQFL 315

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDY 300
           KE+FPEEYSIRRDSVQL+ ANS+KHDNPTSCS EEGKKG+YLPRWGDVASKVH+ +GCD 
Sbjct: 316 KEQFPEEYSIRRDSVQLEQANSIKHDNPTSCSIEEGKKGQYLPRWGDVASKVHSAVGCDS 375

Query: 301 CGMFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNM 360
           CGMFPLIGDRYKCKDCLE  GFDLCGDCYNTRSKRPGRFNQQHRPEHRF LVHP MF+NM
Sbjct: 376 CGMFPLIGDRYKCKDCLEEVGFDLCGDCYNTRSKRPGRFNQQHRPEHRFHLVHPPMFRNM 435

[Close]

BLAST of CsaV3_7G025900 vs. TrEMBL
Match: tr|A0A1S3C6B5|A0A1S3C6B5_CUCME (E3 ubiquitin-protein ligase PRT1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497542 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.1e-139
Identity = 247/270 (91.48%), Postives = 257/270 (95.19%), Query Frame = 0


Query: 1   MAEYQMLDDVDAD----AFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPIC 60
           MAEYQMLDDVDAD    AFLCCVCLDLL+KPIVL CGHISCFWCVHK MNGFRESHCPIC
Sbjct: 76  MAEYQMLDDVDADDIPHAFLCCVCLDLLHKPIVLSCGHISCFWCVHKSMNGFRESHCPIC 135

Query: 61  RRSYYHFPTICEILHQLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKV 120
           RR YYHFPTICEILHQLI+KIYP +YKRRE+QILE EKKIG+FSPQFDSLACGSQAGMKV
Sbjct: 136 RRPYYHFPTICEILHQLIVKIYPTAYKRREAQILEEEKKIGYFSPQFDSLACGSQAGMKV 195

Query: 121 EHLEDSANGELNTNTKNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISV 180
           EHLEDSANGELNTNTKN DA+AELILEENSDVVSSTSVVSLNSLQDPCAQKTQ QEKISV
Sbjct: 196 EHLEDSANGELNTNTKNGDAIAELILEENSDVVSSTSVVSLNSLQDPCAQKTQKQEKISV 255

Query: 181 ADVLCQACTQLLFRPVVMNCGHVFCESCINSQVETLECQVCQSLQPRGFRNVCLELDQFL 240
           ADVLCQACTQLLFRPVV+NCGHVFCESCINSQVETLECQVCQSLQPRGF NVCLELDQFL
Sbjct: 256 ADVLCQACTQLLFRPVVINCGHVFCESCINSQVETLECQVCQSLQPRGFPNVCLELDQFL 315

Query: 241 KEKFPEEYSIRRDSVQLKLANSMKHDNPTS 267
           KE+FPEEYSIRRDSVQL+ ANS+KHDNPTS
Sbjct: 316 KEQFPEEYSIRRDSVQLEQANSIKHDNPTS 345

[Close]

BLAST of CsaV3_7G025900 vs. TrEMBL
Match: tr|K7MSV7|K7MSV7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100787174 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.0e-105
Identity = 192/345 (55.65%), Postives = 240/345 (69.57%), Query Frame = 0


Query: 13  DAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILHQ 72
           D+F+CCVCLDLLYKPIVL CGHI CFWCV+  MN  RES CP+CR  YYHFPT+C++LH 
Sbjct: 21  DSFVCCVCLDLLYKPIVLSCGHICCFWCVYNSMNCLRESQCPVCRNQYYHFPTVCQLLHF 80

Query: 73  LILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLEDSANGELNTNTK 132
           L+LKIY A+YKRRE+Q LE EK+ GF+SPQFD   C SQA  K  H   +AN       +
Sbjct: 81  LLLKIYTAAYKRRENQTLEEEKQSGFYSPQFDPDTCESQA--KFGHSGSAAN-------E 140

Query: 133 NDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKTQNQEKISVADVLCQACTQLLFRPV 192
            DD    +  +  SD++ + +       + P  ++   Q K+SVADV C  C QLLF PV
Sbjct: 141 GDDGT--IYYDGESDIIGTPA----KGKKMP-QEELSVQRKLSVADVTCTMCKQLLFHPV 200

Query: 193 VMNCGHVFCESC-INSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKFPEEYSIRRDSV 252
           V+NCGHV+C++C IN   E L C+VCQS  PRG   VCLELD FL+E+FPEEY  RRD++
Sbjct: 201 VLNCGHVYCQTCVINIDDEMLRCKVCQSPHPRGLPKVCLELDHFLEEQFPEEYGQRRDAI 260

Query: 253 QLKLANSMKHDNPTSCSNEEGKKGEYLPRWGDVASKVHTFIGCDYCGMFPLIGDRYKCKD 312
           +LK    +K D P+SCS + GK+ E +  W D   KVH  +GCD+CGMFP+IGDRY+C D
Sbjct: 261 ELKQI-KVKPDTPSSCSLDNGKRVENIDWWSDPDPKVHIGVGCDFCGMFPIIGDRYRCID 320

Query: 313 CLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPSMFQNM 357
           C E  GFDLCGDCY +RSK PGRFNQQH  EH+F+LV P++  NM
Sbjct: 321 CKEKMGFDLCGDCYASRSKLPGRFNQQHTSEHKFKLVPPNIIHNM 348

[Close]

BLAST of CsaV3_7G025900 vs. TrEMBL
Match: tr|A0A067K3L0|A0A067K3L0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17552 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.9e-105
Identity = 192/353 (54.39%), Postives = 239/353 (67.71%), Query Frame = 0


Query: 12  ADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSYYHFPTICEILH 71
           +D F+CC+CLDLL+KPIVL CGH+SCFWCVH CMNG R SHCPICRR Y HFPTIC+ILH
Sbjct: 22  SDCFICCICLDLLFKPIVLSCGHVSCFWCVHNCMNGVRASHCPICRRPYNHFPTICQILH 81

Query: 72  QLILKIYPASYKRRESQILEVEKKIGFFSPQFDSLACGSQAGMKVEHLEDSANGELNTNT 131
            L+LK+YP +YKRRE Q L  EK+ G FSPQ +  ACGS A  + +HL+D  +       
Sbjct: 82  FLLLKMYPVAYKRREEQTLVEEKERGCFSPQLNCSACGSHANQEYDHLKDPEH------- 141

Query: 132 KNDDAVAELILEENSDVVSSTSVVSLNSLQDPCAQKT----QNQEKISVADVLCQACTQL 191
                             SS+S +  NS  + C+ +T     N +++SVADV C AC QL
Sbjct: 142 ------------------SSSSSLYSNSCSESCSTRTGEPNGNCKQVSVADVQCIACKQL 201

Query: 192 LFRPVVMNCGHVFCESCI-NSQVETLECQVCQSLQPRGFRNVCLELDQFLKEKFPEEYSI 251
           LFRPV++NCGH +CESCI  S    L CQ CQSL P G   VCL+LD F++E FP EY++
Sbjct: 202 LFRPVILNCGHGYCESCIVGSSDGMLRCQACQSLHPIGCPKVCLDLDHFVQEHFPREYAL 261

Query: 252 RRDSVQLKLANSMKHDNPTSCSNEEGK--------KGEYLPRWGDVASKVHTFIGCDYCG 311
           RR++VQLK A S  ++NPT  +    K        K E+LP+  +   KVH  +GCD+CG
Sbjct: 262 RREAVQLKQALS-DNENPTYSTGASNKDSLLSSIPKAEHLPQVVNSHLKVHYGVGCDFCG 321

Query: 312 MFPLIGDRYKCKDCLEASGFDLCGDCYNTRSKRPGRFNQQHRPEHRFQLVHPS 352
           M+P+IGDRY+CKDC+E  GFDLCGDCYNTRSK PGRFNQQH PEH+ +LV PS
Sbjct: 322 MYPIIGDRYQCKDCVEKIGFDLCGDCYNTRSKLPGRFNQQHTPEHKLKLVPPS 348

The following BLAST results are available for this feature:

BLAST of CsaV3_7G025900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139635.1	4.1e-215	100.00	PREDICTED: E3 ubiquitin-protein ligase PRT1 [Cucumis sativus] >KGN44590.1 hypoth...	[more]
XP_008457982.1	4.0e-194	90.08	PREDICTED: E3 ubiquitin-protein ligase PRT1 isoform X1 [Cucumis melo]	[more]
XP_023515020.1	1.3e-165	76.67	E3 ubiquitin-protein ligase PRT1 [Cucurbita pepo subsp. pepo]	[more]
XP_023005016.1	1.7e-165	76.67	E3 ubiquitin-protein ligase PRT1 [Cucurbita maxima] >XP_023005017.1 E3 ubiquitin...	[more]
XP_022960374.1	5.0e-165	76.73	E3 ubiquitin-protein ligase PRT1 [Cucurbita moschata]	[more]

BLAST of CsaV3_7G025900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24800.1	4.6e-88	47.03	proteolysis 1	[more]
AT2G42030.1	5.8e-06	29.49	RING/U-box superfamily protein	[more]
AT4G03510.1	5.8e-06	35.94	RING membrane-anchor 1	[more]
AT1G04020.1	2.2e-05	45.45	breast cancer associated RING 1	[more]
AT1G74990.1	2.9e-05	39.22	RING/U-box superfamily protein	[more]

BLAST of CsaV3_7G025900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LBL5\|PRT1_ARATH	8.4e-87	47.03	E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana OX=3702 GN=PRT1 PE=2 SV...	[more]
sp\|Q9NZS9\|BFAR_HUMAN	2.1e-05	30.00	Bifunctional apoptosis regulator OS=Homo sapiens OX=9606 GN=BFAR PE=1 SV=1	[more]
sp\|Q5PQN2\|BFAR_RAT	2.1e-05	31.25	Bifunctional apoptosis regulator OS=Rattus norvegicus OX=10116 GN=Bfar PE=2 SV=1	[more]
sp\|Q1L5Z9\|LONF2_HUMAN	2.8e-05	37.50	LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens OX=960...	[more]
sp\|Q496Y0\|LONF3_HUMAN	3.6e-05	26.13	LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens OX=960...	[more]

BLAST of CsaV3_7G025900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4I8\|A0A0A0K4I8_CUCSA	2.7e-215	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G339130 PE=4 SV=1	[more]
tr\|A0A1S3C815\|A0A1S3C815_CUCME	2.6e-194	90.08	E3 ubiquitin-protein ligase PRT1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497...	[more]
tr\|A0A1S3C6B5\|A0A1S3C6B5_CUCME	1.1e-139	91.48	E3 ubiquitin-protein ligase PRT1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497...	[more]
tr\|K7MSV7\|K7MSV7_SOYBN	1.0e-105	55.65	Uncharacterized protein OS=Glycine max OX=3847 GN=100787174 PE=4 SV=1	[more]
tr\|A0A067K3L0\|A0A067K3L0_JATCU	3.9e-105	54.39	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17552 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR000433	Znf_ZZ
IPR027370	Znf-RING_LisH
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G025900.1	CsaV3_7G025900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 17..56 e-value: 6.3E-5 score: 32.4 coord: 181..217 e-value: 2.8E-5 score: 33.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 17..57 score: 11.575
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 181..218 score: 10.763
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 1..129 e-value: 6.5E-15 score: 57.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 130..247 e-value: 3.5E-11 score: 44.7
None	No IPR available	GENE3D	G3DSA:3.30.60.90		coord: 283..348 e-value: 2.4E-11 score: 45.0
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 16..60 e-value: 2.4E-9 score: 36.8
None	No IPR available	PANTHER	PTHR15898	UNCHARACTERIZED	coord: 14..105
None	No IPR available	PANTHER	PTHR15898:SF1	BIFUNCTIONAL APOPTOSIS REGULATOR	coord: 117..350
None	No IPR available	PANTHER	PTHR15898:SF1	BIFUNCTIONAL APOPTOSIS REGULATOR	coord: 14..105
None	No IPR available	PANTHER	PTHR15898	UNCHARACTERIZED	coord: 117..350
None	No IPR available	CDD	cd16449	RING-HC	coord: 17..56 e-value: 4.07358E-6 score: 42.4545
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 12..66
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 175..221
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 287..348
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 181..209 e-value: 2.6E-6 score: 27.3
IPR000433	Zinc finger, ZZ-type	PFAM	PF00569	ZZ	coord: 293..330 e-value: 4.5E-7 score: 29.5
IPR000433	Zinc finger, ZZ-type	PROSITE	PS50135	ZF_ZZ_2	coord: 288..343 score: 10.734
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 196..205

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G025900	CSPI07G14180	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G025900	Cucsa.078310	Cucumber (Gy14) v1	cgycucB080
CsaV3_7G025900	CmaCh08G000740	Cucurbita maxima (Rimu)	cmacucB1086
CsaV3_7G025900	CmoCh08G000750	Cucurbita moschata (Rifu)	cmocucB1068
CsaV3_7G025900	Cp4.1LG17g09820	Cucurbita pepo (Zucchini)	cpecucB0419
CsaV3_7G025900	CsGy7G012790	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G025900	Carg04903	Silver-seed gourd	carcucB0103
CsaV3_7G025900	Cla014958	Watermelon (97103) v1	cucwmB592
CsaV3_7G025900	MELO3C021013	Melon (DHL92) v3.5.1	cucmeB539
CsaV3_7G025900	ClCG09G009060	Watermelon (Charleston Gray)	cucwcgB547
CsaV3_7G025900	Lsi02G020800	Bottle gourd (USVL1VR-Ls)	cuclsiB538
CsaV3_7G025900	MELO3C021013.2	Melon (DHL92) v3.6.1	cucmedB527
CsaV3_7G025900	Cla97C09G171840	Watermelon (97103) v2	cucwmbB593

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G025900	Cucurbita maxima (Rimu)	cmacucB0457
CsaV3_7G025900	Cucurbita maxima (Rimu)	cmacucB0773
CsaV3_7G025900	Cucurbita moschata (Rifu)	cmocucB0450
CsaV3_7G025900	Cucurbita pepo (Zucchini)	cpecucB0182
CsaV3_7G025900	Cucurbita pepo (Zucchini)	cpecucB0951
CsaV3_7G025900	Bottle gourd (USVL1VR-Ls)	cuclsiB560
CsaV3_7G025900	Watermelon (Charleston Gray)	cucwcgB596
CsaV3_7G025900	Watermelon (97103) v2	cucwmbB573
CsaV3_7G025900	Cucumber (Chinese Long) v3	cuccucB159
CsaV3_7G025900	Silver-seed gourd	carcucB0459
CsaV3_7G025900	Cucumber (Gy14) v2	cgybcucB158