CsaV3_7G018790 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G018790
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	chr7 : 8772826 .. 8773340 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCAGCAAGCTTCATCTCCTCTTGCCCCTCCTTGTTCTTCTTCTACCTGCCGCTGTTACCGCTTATCCACTCTGTAAGATTGACACCTCTGATCTCAAGCTTTGCCGCTCGGCTGTGACCCCACCGGACCATGGCCAGCCTTTGCCACTCCCCACTGAAGACTGCTGTTCAGTGGTTCGTCATGCTGACCTTAAGTGCCTTTGCAATCTCAAGTCCGTCCTCCCCTCCATGGGGATTGACACTGCCAATGCCTTGGCTTTGCCATCCAAATGTAACGTAGCATCCCCACCCGAGTGCCATTCCTAAACCTTGTTTGGTAAATATTCTTCTTTCATTTATTTACATTGTATACACAAATTTGAAATCATCATCCTTTATGAGCCTACACATTAACTCTCTCTTTCTCTCTTCTAAATGGCAGATTTTATGAATGGGTAGGTCTTGTGTTGGAAAAATCAAGTGCACGGAGTCGATGTTTTGATATGGGCATATTGTGTGTAATGTATTGA

mRNA sequence

ATGGCCCCCAGCAAGCTTCATCTCCTCTTGCCCCTCCTTGTTCTTCTTCTACCTGCCGCTGTTACCGCTTATCCACTCTGTAAGATTGACACCTCTGATCTCAAGCTTTGCCGCTCGGCTGTGACCCCACCGGACCATGGCCAGCCTTTGCCACTCCCCACTGAAGACTGCTGTTCAGTGGTTCGTCATGCTGACCTTAAGTGCCTTTGCAATCTCAAGTCCGTCCTCCCCTCCATGGGGATTGACACTGCCAATGCCTTGGCTTTGCCATCCAAATGTCTTGTGTTGGAAAAATCAAGTGCACGGAGTCGATGTTTTGATATGGGCATATTGTGTGTAATGTATTGA

Coding sequence (CDS)

ATGGCCCCCAGCAAGCTTCATCTCCTCTTGCCCCTCCTTGTTCTTCTTCTACCTGCCGCTGTTACCGCTTATCCACTCTGTAAGATTGACACCTCTGATCTCAAGCTTTGCCGCTCGGCTGTGACCCCACCGGACCATGGCCAGCCTTTGCCACTCCCCACTGAAGACTGCTGTTCAGTGGTTCGTCATGCTGACCTTAAGTGCCTTTGCAATCTCAAGTCCGTCCTCCCCTCCATGGGGATTGACACTGCCAATGCCTTGGCTTTGCCATCCAAATGTCTTGTGTTGGAAAAATCAAGTGCACGGAGTCGATGTTTTGATATGGGCATATTGTGTGTAATGTATTGA

Protein sequence

MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSVLPSMGIDTANALALPSKCLVLEKSSARSRCFDMGILCVMY

Homology

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BLAST of CsaV3_7G018790 vs. NCBI nr
Match: XP_004150253.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus] >KGN59080.1 hypothetical protein Csa_3G760500 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45
Identity = 95/103 (92.23%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60
           MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV
Sbjct: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60

Query: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCLVLEKSSARS 104
           VRHADLKCLCNLKSVLPSMGIDTANALALPSKC V       S
Sbjct: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCNVASPPECHS 103

[Close]

BLAST of CsaV3_7G018790 vs. NCBI nr
Match: XP_008447695.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28
Identity = 69/103 (66.99%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60
           MAPSKLHLL          AVT+ PLC+IDT+DL++CR AVTPPDHG+ LPLPT+ CCSV
Sbjct: 1   MAPSKLHLLXXXXXXXXXGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSV 60

Query: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCLVLEKSSARS 104
           VR ADLKCLC+LK  LPS GI+TANALALPSKC V      RS
Sbjct: 61  VRRADLKCLCSLKYALPSFGINTANALALPSKCGVSPPPECRS 103

[Close]

BLAST of CsaV3_7G018790 vs. NCBI nr
Match: KGN59078.1 (hypothetical protein Csa_3G759990 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 6  LHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHAD 65
          L L L  LV++L A  TA  LCK+DT +L +CR AV P  HG+PL  PTE CCSV+R AD
Sbjct: 12 LFLRLLFLVMVL-AETTATLLCKVDTKELCVCRPAVAPL-HGKPLQPPTERCCSVLRSAD 71

Query: 66 LKCLCNLKSVLPSMGIDTANALALPSKC 94
          LKCLCNLKS+LPS GI+   ALALPSKC
Sbjct: 72 LKCLCNLKSILPSAGINATIALALPSKC 97

[Close]

BLAST of CsaV3_7G018790 vs. NCBI nr
Match: KYP36448.1 (hypothetical protein KK1_042438, partial [Cajanus cajan])

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 8   LLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLK 67
           L+  LL++ L     A+ LC ID+S LKLCR+AVT    GQ  P P   CC+V+R A+L 
Sbjct: 27  LVATLLLIALLGGAKAFELCNIDSSQLKLCRAAVT----GQNPPPPDGKCCAVIRQANLP 86

Query: 68  CLCNLKSVLPSMGIDTANALALPSKC 94
           CLC+ KSVLPS GI+  NA ALP KC
Sbjct: 87  CLCSYKSVLPSFGINPKNAFALPGKC 108

[Close]

BLAST of CsaV3_7G018790 vs. NCBI nr
Match: XP_009335428.1 (PREDICTED: putative lipid-transfer protein DIR1 [Pyrus x bretschneideri] >XP_009339389.2 PREDICTED: putative lipid-transfer protein DIR1 [Pyrus x bretschneideri])

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 12  LLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCN 71
           +L+L L A  TA  +C I++  LK CR AVT    G+    PT+ CCSVVR A+L CLCN
Sbjct: 30  ILLLALVAGSTAVSICNIESDQLKECRPAVT----GKSPKPPTKRCCSVVRQANLPCLCN 89

Query: 72  LKSVLPSMGIDTANALALPSKC 94
            KSVLPS+GID A A+ALP KC
Sbjct: 90  FKSVLPSIGIDPALAMALPKKC 107

[Close]

BLAST of CsaV3_7G018790 vs. TAIR10
Match: AT5G55450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 8  LLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLK 67
          L + L   ++    T+ P+C IDT+DL  CR AVT    G   P P  DCC+V R A+L+
Sbjct: 15 LAMVLTAAIMVKEATSIPVCNIDTNDLAKCRPAVT----GNNPPPPGPDCCAVARVANLQ 74

Query: 68 CLCNLKSVLPSMGIDTANALALPSKC 94
          CLC  K  LP++GID +    L + C
Sbjct: 75 CLCPYKPYLPTVGIDPSRVRPLLANC 96

[Close]

BLAST of CsaV3_7G018790 vs. TAIR10
Match: AT5G55460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 8  LLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLK 67
          L + L  L+L    T+   C I+ + L+ CR AV     G   P P ++CC +++ A+LK
Sbjct: 14 LAIVLAALVLMEEPTSITACNINANHLEKCRPAVI----GDNPPSPIKECCELLQAANLK 73

Query: 68 CLCNLKSVLPSMGIDTANALALPSKC 94
          C+C  KSVLP + +  +   AL SKC
Sbjct: 74 CICRFKSVLPVLAVYPSKVQALLSKC 95

[Close]

BLAST of CsaV3_7G018790 vs. TAIR10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06
Identity = 26/73 (35.62%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 23 AYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSV--LPSMG 82
          A  LC +   +L  C+ AV+  +       P++ CC+ ++HAD  CLC  K+   L S G
Sbjct: 26 AIDLCGMSQDELNECKPAVSKENPTS----PSQPCCTALQHADFACLCGYKNSPWLGSFG 85

Query: 83 IDTANALALPSKC 94
          +D   A ALP +C
Sbjct: 86 VDPELASALPKQC 94

[Close]

BLAST of CsaV3_7G018790 vs. TAIR10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 27/57 (47.37%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 37  CRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSVLPSMGIDTANALALPSKC 94
           CR+AV P     P+P PTE CCS V      CLC L +  P  GID + AL LP +C
Sbjct: 62  CRAAVAP---FSPIP-PTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMALQLPQRC 114

[Close]

BLAST of CsaV3_7G018790 vs. TAIR10
Match: AT5G55410.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04
Identity = 24/82 (29.27%), Postives = 39/82 (47.56%), Query Frame = 0


Query: 12 LLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCN 71
          L   ++    T+  +C +D +D++ CR A+T    G              R A+ +CLC 
Sbjct: 19 LTFAMMVKEATSMSICDMDINDMQKCRPAIT----GNXXXXXXXXXXXXXRKANFECLCR 78

Query: 72 LKSVLPSMGIDTANALALPSKC 94
           K  LP + ID +  +AL +KC
Sbjct: 79 FKFYLPILRIDPSKVVALVAKC 96

[Close]

BLAST of CsaV3_7G018790 vs. Swiss-Prot
Match: sp|Q8W453|DIRL1_ARATH (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.4e-05
Identity = 26/73 (35.62%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 23 AYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSV--LPSMG 82
          A  LC +   +L  C+ AV+  +       P++ CC+ ++HAD  CLC  K+   L S G
Sbjct: 26 AIDLCGMSQDELNECKPAVSKENPTS----PSQPCCTALQHADFACLCGYKNSPWLGSFG 85

Query: 83 IDTANALALPSKC 94
          +D   A ALP +C
Sbjct: 86 VDPELASALPKQC 94

[Close]

BLAST of CsaV3_7G018790 vs. TrEMBL
Match: tr|A0A0A0LAS6|A0A0A0LAS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.2e-45
Identity = 95/103 (92.23%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60
           MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV
Sbjct: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60

Query: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCLVLEKSSARS 104
           VRHADLKCLCNLKSVLPSMGIDTANALALPSKC V       S
Sbjct: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCNVASPPECHS 103

[Close]

BLAST of CsaV3_7G018790 vs. TrEMBL
Match: tr|A0A1S3BHE7|A0A1S3BHE7_CUCME (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.2e-29
Identity = 69/103 (66.99%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MAPSKLHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSV 60
           MAPSKLHLL          AVT+ PLC+IDT+DL++CR AVTPPDHG+ LPLPT+ CCSV
Sbjct: 1   MAPSKLHLLXXXXXXXXXGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSV 60

Query: 61  VRHADLKCLCNLKSVLPSMGIDTANALALPSKCLVLEKSSARS 104
           VR ADLKCLC+LK  LPS GI+TANALALPSKC V      RS
Sbjct: 61  VRRADLKCLCSLKYALPSFGINTANALALPSKCGVSPPPECRS 103

[Close]

BLAST of CsaV3_7G018790 vs. TrEMBL
Match: tr|A0A0A0LBB0|A0A0A0LBB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.8e-18
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 6  LHLLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHAD 65
          L L L  LV++L A  TA  LCK+DT +L +CR AV P  HG+PL  PTE CCSV+R AD
Sbjct: 12 LFLRLLFLVMVL-AETTATLLCKVDTKELCVCRPAVAPL-HGKPLQPPTERCCSVLRSAD 71

Query: 66 LKCLCNLKSVLPSMGIDTANALALPSKC 94
          LKCLCNLKS+LPS GI+   ALALPSKC
Sbjct: 72 LKCLCNLKSILPSAGINATIALALPSKC 97

[Close]

BLAST of CsaV3_7G018790 vs. TrEMBL
Match: tr|A0A151R1H0|A0A151R1H0_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_042438 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.6e-14
Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 8   LLLPLLVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLK 67
           L+  LL++ L     A+ LC ID+S LKLCR+AVT    GQ  P P   CC+V+R A+L 
Sbjct: 27  LVATLLLIALLGGAKAFELCNIDSSQLKLCRAAVT----GQNPPPPDGKCCAVIRQANLP 86

Query: 68  CLCNLKSVLPSMGIDTANALALPSKC 94
           CLC+ KSVLPS GI+  NA ALP KC
Sbjct: 87  CLCSYKSVLPSFGINPKNAFALPGKC 108

[Close]

BLAST of CsaV3_7G018790 vs. TrEMBL
Match: tr|A0A2K3LLU8|A0A2K3LLU8_TRIPR (Lipid-transfer protein DIR1-like OS=Trifolium pratense OX=57577 GN=L195_g035475 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.3e-13
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 13 LVLLLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNL 72
          L+  +  +  A  +C ID++ LKLCR AVT    G+  P P+ +CC V+R A+L CLC+ 
Sbjct: 17 LLFSMLGSTLAVVICNIDSNQLKLCRDAVT----GRNPPNPSNECCDVIRRANLPCLCSY 76

Query: 73 KSVLPSMGIDTANALALPSKC 94
          KS+LPS GID A ALALP KC
Sbjct: 77 KSILPSFGIDGAKALALPGKC 93

The following BLAST results are available for this feature:

BLAST of CsaV3_7G018790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150253.1	6.4e-45	92.23	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus] >KGN59080.1 hy...	[more]
XP_008447695.1	1.1e-28	66.99	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]	[more]
KGN59078.1	1.5e-17	63.64	hypothetical protein Csa_3G759990 [Cucumis sativus]	[more]
KYP36448.1	1.3e-13	53.49	hypothetical protein KK1_042438, partial [Cajanus cajan]	[more]
XP_009335428.1	2.2e-13	56.10	PREDICTED: putative lipid-transfer protein DIR1 [Pyrus x bretschneideri] >XP_009...	[more]

BLAST of CsaV3_7G018790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55450.1	3.3e-11	41.86	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55460.1	1.5e-08	37.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48485.1	1.9e-06	35.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G52130.1	1.2e-05	47.37	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.2	2.3e-04	29.27	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsaV3_7G018790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W453\|DIRL1_ARATH	3.4e-05	35.62	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=...	[more]

BLAST of CsaV3_7G018790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LAS6\|A0A0A0LAS6_CUCSA	4.2e-45	92.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV=1	[more]
tr\|A0A1S3BHE7\|A0A1S3BHE7_CUCME	7.2e-29	66.99	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=...	[more]
tr\|A0A0A0LBB0\|A0A0A0LBB0_CUCSA	9.8e-18	63.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV=1	[more]
tr\|A0A151R1H0\|A0A151R1H0_CAJCA	8.6e-14	53.49	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_042438 PE=4 S...	[more]
tr\|A0A2K3LLU8\|A0A2K3LLU8_TRIPR	7.3e-13	50.62	Lipid-transfer protein DIR1-like OS=Trifolium pratense OX=57577 GN=L195_g035475 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005504	fatty acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009627	systemic acquired resistance

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR039265	DIR1-like
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G018790.1	CsaV3_7G018790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..105 e-value: 0.0074 score: 25.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 49..99 e-value: 1.5E-7 score: 31.4
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 24..100 e-value: 2.4E-14 score: 54.9
None	No IPR available	PANTHER	PTHR33122:SF4	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN	coord: 10..95
None	No IPR available	CDD	cd04660	nsLTP_like	coord: 27..93 e-value: 1.21541E-13 score: 60.4606
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	FAMILY NOT NAMED	coord: 10..95
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..94

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G018790	CSPI03G34370	Wild cucumber (PI 183967)	cpicucB196
CsaV3_7G018790	Cucsa.281590	Cucumber (Gy14) v1	cgycucB431
CsaV3_7G018790	CmaCh01G011020	Cucurbita maxima (Rimu)	cmacucB0585
CsaV3_7G018790	CmoCh01G011480	Cucurbita moschata (Rifu)	cmocucB0575
CsaV3_7G018790	Cp4.1LG02g00850	Cucurbita pepo (Zucchini)	cpecucB0733
CsaV3_7G018790	CsGy7G008460	Cucumber (Gy14) v2	cgybcucB347
CsaV3_7G018790	Carg22387	Silver-seed gourd	carcucB0924
CsaV3_7G018790	Cla003272	Watermelon (97103) v1	cucwmB594
CsaV3_7G018790	MELO3C013103	Melon (DHL92) v3.5.1	cucmeB541
CsaV3_7G018790	ClCG09G020930	Watermelon (Charleston Gray)	cucwcgB549
CsaV3_7G018790	Lsi02G018670	Bottle gourd (USVL1VR-Ls)	cuclsiB539
CsaV3_7G018790	MELO3C013103.2	Melon (DHL92) v3.6.1	cucmedB528
CsaV3_7G018790	Cla97C09G182360	Watermelon (97103) v2	cucwmbB595
CsaV3_7G018790	Bhi09G001435	Wax gourd	cucwgoB734

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G018790	Silver-seed gourd	carcucB0946
CsaV3_7G018790	Cucurbita maxima (Rimu)	cmacucB0052
CsaV3_7G018790	Cucurbita moschata (Rifu)	cmocucB0038
CsaV3_7G018790	Cucurbita pepo (Zucchini)	cpecucB0991
CsaV3_7G018790	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G018790	Wild cucumber (PI 183967)	cpicucB416