CsaV3_7G018450 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G018450
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTranscription termination factor like
Locationchr7 : 8385319 .. 8388875 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATACAGTAAATAGGTGGATGTTTTTGTTATATTTATGAATTTTTTTTGTTTATTAAAAATAGAAGGTCTCAGGAATTGTGATGGGTAATTTGGTACCACTAACACCAAATCCTTTAGAATGCCGCTTTTATCATGCCACGTCGTCCTTTTTCAGTTTTGTTTCGCGCCAACCGCAATTCTTCAAGACGGCACATCTCCTTTCGAAACGACACCGTTCGCCTCACGTTATTATTCATTCCTTAAAGAAAAGAAAACTAAACATCAGGAAACCCGAGAGATTCTCTGTCTCTCTGTTTAGGGTTTTTCGGTATATTCTCTTTCTCTCTTATCCGTTTCCTTTCCTTCTAAAATGGCTTCTCTCTCCCTCTTCTCTTTCTCTCCCACTCTTCACTCTCACTTTCCATCTTCTTCCGATTTCTATTTACCTTCCCAATTCCTACTCACTTCTTCGTTTGGTAGTCGGAGTAGGAGGAGGAATGTGCCTCGGTTTGTCGTCCGGTCTACTCACTCCAGTGCTGCCATTCTTAAGCCCAAACGGAGGTCGAGATTTGGTCGGACTTTGTCCCCTTTTGATAGCGATGAAGATGGGTATGATGTGGATGAGTTTAGCAGTGATGGGGATGATGATGATGCTTGGCCGGATAATGTGAGTTCTGAATTCCCTTTGTTTTGGTTTTCTTTATGTTCTTGTGCTTTCTGGTTGATTGAATGTGGGTTTGTGATTTTGTTTATTTTTTCATTTTCATTGTTGGGAAGTGGTTGAATTGATTGTTTTTGTGATGAGAAACTTGACTGTTCAGTGATAAGCGAAGAGTAGATAAAAGAAGTATTTGAAACTGTCGTTACACTGAATTCAGATAACATAGTTCTGGCCATGGATAACCAATGGAGTGCATGAATTTTTTATATCTTGTTTTGACTGGGTAATGAAAAGAGAAGTTCGAGGAAATTTTAGCTTTCGTTTTCATGTTATTGCTTCATTTCTGTTGGGGTTTTTCATAGAGGATTCCTTGGTTTTTTTTTCTTTTTTTTTCTTTTTTTTTGGTTTTAGTTCTTTATGCATTCTGCAGACGGTCATTGAGAATCTCAACTTTTTACTGTCTGTGCACTGTGGGATTTTCATCTTCTAGGGTGATTTCTCGGATGTTGAATATGATGCCAAAAGAAAGAGAGCCAAGTTACAAAGCAAAACCAGAAATAACAACTCACAGCGAGGTTATCTTTTGTTGTTTATATAATCATTCTCCTAAAGGAGCGATCAATTTACTCAGCATACTCTTCTTGTGCAGATAACGTGAGACATCCCAGAGAAAGCAGGGGTATAAAATCCTCAAATGATGGAAAGAGTTTTAAAGTTAAGAGTAACCACCTTGATTTTCAAGATATCACAAATGATACTGTAAAACATGACTTCAATATTGATGAGGAAGTTTGTTCTACCAATACAGGCAGGAAAGGAAAGGTGGGTTCGTAAGTTTCCAACATTATTAACACTTTCAGGTTGCTTAAGTGAATGTTGAATTTACGTGTGTTTCCATTGATTCAGGTGATGACCAAGAAGTCCATGGAAATTAGATTTCCTCGTCTGGCAGAAGAAATAGATTTGGACGAGAAATGGTTTCCTCTGCTTAATTATCTTACAACATTTGGGCTCAAGGAATCACATTTTCTCCAAATGTATGAGAGACACATGCCTTCTCTTCAAATAAATGTTTATTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTCAAACAAAGGGATGTTCGAAGAATACTCTTGAGACAGCCCCAAATTCTGGAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAACTTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACTGTCCGATACTTGGTTGAGGAAGTTGGCATCCAGGAAAAGGACCTGGGTAAAGTTGTGCAACTGAGTCCTCAAATTCTGGTTCAACGGATTGATACTTCATGGAACACCAGATATATGTTTCTTTCAAAAGAAATTGGAGCTCCTCGAGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCATTATAGCATCAACGATGGTTTACTACCCAGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCAGAGATCTTGAAAGTCTTAACTAGCCTTACACAGGTAATTTGCGTTTGTTTCTATTTTAGTCAGTATGTTCTCAGAAAAATATATACCCTCATGGAAATGGTTGTATTCTTCTTGCCTCGTAAACTTTTTCTTGCTGTAAGAGGTTGTATTCTTTACATTTGTTTGTTGCCTCGTCATCTTGGCTGCAAGCTTCGAATGCTTTTAGTACTTTCTTCATAAATTATATTCTTGTCTTATGTCCCTTAACCAGATCTGTTGATACTACAGGTCTTTTCTCTGTCTCTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGTAATGAAGTGAAATCACTGACCAAGTATCCCATGTATCTAAGCTTGTCCTTGGATCAGAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTTAAGAAAGCACCCAAGGGTCCGTTCCCTTTAAGTTCCTTTGTTCCAACTGATGAATGCTTTTGTGAGCAGTGGGCTGAAACCAGCCTAGATAAGTATCTTGAATTTAGGAAGAGATTACTATTGAAGGAGTTTGCGGAGAAATATGAAAGAAGACGATAACATAATTATCGTATTACTCCAAAGTGAAATGACTTGATTGCACCTCGGGGTTCTTCCATCTACTAACTTGAAGTGAAGGTATGGCGTGAATGTTCTGGTTGCGATGCAGGGCGTTTATGAACATAAATTTTGCCATTCTTTTGTCGTTCTGGTAGCCATACTCAGATTATGAACTACTCCAGTTTAGAGTTCAATGACAGCTGAAATTCTTTGGCAAGACTAGAGATGGAATTCTTACCTGCCATGTCTCTGCATGGTCATTCAAAAGGTGGTGAGCTATTAGCAGTCGCATGCTCTCACTGAAAGGTCTCGTTTGAAACTTATAACAGAACTCTTTGTAAATCTTTTGAAAGATTGGGGGAGAAGCATTGTATAATGAGCATACATATTCCAGGTGATTTGGTCTTTCTGTGTCCTGAAAGTTGTAATCGATACCAATTTTGGTTCTTAAATATTGTAATTGACAAAAATTTTGGCCTTTCACAAGCGGGAATTCACTGTTTTTTCTTCTTTCAAAACCTTTTTTTTTCTTATCGCTTGCTCTGCCACCTCGAGCCATTGTATGAACATGCAGGAGGTGTTCTTACCTAAGCGTGTGTAGACCAGGAGAGAGCACTTGAACATTTTCAATTGTAGTATATTCACTGTATGAAATAGAGTTTGACTGAACCTTGATGGACGGAGAAGCTGCTCCTCCATCAGTGATAATAAGGTATACAGATACTTGGGTTACACAGGTTATTTATTTATTTATTTATATTATT

mRNA sequence

ATGGCTTCTCTCTCCCTCTTCTCTTTCTCTCCCACTCTTCACTCTCACTTTCCATCTTCTTCCGATTTCTATTTACCTTCCCAATTCCTACTCACTTCTTCGTTTGGTAGTCGGAGTAGGAGGAGGAATGTGCCTCGGTTTGTCGTCCGGTCTACTCACTCCAGTGCTGCCATTCTTAAGCCCAAACGGAGGTCGAGATTTGGTCGGACTTTGTCCCCTTTTGATAGCGATGAAGATGGGTATGATGTGGATGAGTTTAGCAGTGATGGGGATGATGATGATGCTTGGCCGGATAATGGTGATTTCTCGGATGTTGAATATGATGCCAAAAGAAAGAGAGCCAAGTTACAAAGCAAAACCAGAAATAACAACTCACAGCGAGATAACGTGAGACATCCCAGAGAAAGCAGGGGTATAAAATCCTCAAATGATGGAAAGAGTTTTAAAGTTAAGAGTAACCACCTTGATTTTCAAGATATCACAAATGATACTGTAAAACATGACTTCAATATTGATGAGGAAGTTTGTTCTACCAATACAGGCAGGAAAGGAAAGGTGATGACCAAGAAGTCCATGGAAATTAGATTTCCTCGTCTGGCAGAAGAAATAGATTTGGACGAGAAATGGTTTCCTCTGCTTAATTATCTTACAACATTTGGGCTCAAGGAATCACATTTTCTCCAAATGTATGAGAGACACATGCCTTCTCTTCAAATAAATGTTTATTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTCAAACAAAGGGATGTTCGAAGAATACTCTTGAGACAGCCCCAAATTCTGGAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAACTTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACTGTCCGATACTTGGTTGAGGAAGTTGGCATCCAGGAAAAGGACCTGGGTAAAGTTGTGCAACTGAGTCCTCAAATTCTGGTTCAACGGATTGATACTTCATGGAACACCAGATATATGTTTCTTTCAAAAGAAATTGGAGCTCCTCGAGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCATTATAGCATCAACGATGGTTTACTACCCAGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCAGAGATCTTGAAAGTCTTAACTAGCCTTACACAGGTCTTTTCTCTGTCTCTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGTAATGAAGTGAAATCACTGACCAAGTATCCCATGTATCTAAGCTTGTCCTTGGATCAGAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTTAAGAAAGCACCCAAGGGTCCGTTCCCTTTAAGTTCCTTTGTTCCAACTGATGAATGCTTTTGTGAGCAGTGGGCTGAAACCAGCCTAGATAAGTATCTTGAATTTAGGAAGAGATTACTATTGAAGGAGTTTGCGGAGAAATATGAAAGAAGACGATAA

Coding sequence (CDS)

ATGGCTTCTCTCTCCCTCTTCTCTTTCTCTCCCACTCTTCACTCTCACTTTCCATCTTCTTCCGATTTCTATTTACCTTCCCAATTCCTACTCACTTCTTCGTTTGGTAGTCGGAGTAGGAGGAGGAATGTGCCTCGGTTTGTCGTCCGGTCTACTCACTCCAGTGCTGCCATTCTTAAGCCCAAACGGAGGTCGAGATTTGGTCGGACTTTGTCCCCTTTTGATAGCGATGAAGATGGGTATGATGTGGATGAGTTTAGCAGTGATGGGGATGATGATGATGCTTGGCCGGATAATGGTGATTTCTCGGATGTTGAATATGATGCCAAAAGAAAGAGAGCCAAGTTACAAAGCAAAACCAGAAATAACAACTCACAGCGAGATAACGTGAGACATCCCAGAGAAAGCAGGGGTATAAAATCCTCAAATGATGGAAAGAGTTTTAAAGTTAAGAGTAACCACCTTGATTTTCAAGATATCACAAATGATACTGTAAAACATGACTTCAATATTGATGAGGAAGTTTGTTCTACCAATACAGGCAGGAAAGGAAAGGTGATGACCAAGAAGTCCATGGAAATTAGATTTCCTCGTCTGGCAGAAGAAATAGATTTGGACGAGAAATGGTTTCCTCTGCTTAATTATCTTACAACATTTGGGCTCAAGGAATCACATTTTCTCCAAATGTATGAGAGACACATGCCTTCTCTTCAAATAAATGTTTATTCTGCTCAAGAAAGACTAGAATACTTGTTAAGTGTTGGTGTCAAACAAAGGGATGTTCGAAGAATACTCTTGAGACAGCCCCAAATTCTGGAGTACACAGTAGAGAACAATTTGAAATCCCATGTTGCTTTCTTACTTAGTTTGGGAATCCCAACTTCCAGAGTGGGGCAGATCATTGCTGCTGCTCCATCTCTATTTTCTTATAGTGTTGAGAATTCATTAAAACCCACTGTCCGATACTTGGTTGAGGAAGTTGGCATCCAGGAAAAGGACCTGGGTAAAGTTGTGCAACTGAGTCCTCAAATTCTGGTTCAACGGATTGATACTTCATGGAACACCAGATATATGTTTCTTTCAAAAGAAATTGGAGCTCCTCGAGATAATGTAGTGAAGATGGTAACTAAACATCCTCAACTCCTCCATTATAGCATCAACGATGGTTTACTACCCAGGATCAATTTCCTTAGAAGTATTGGAATGCGAAATTCAGAGATCTTGAAAGTCTTAACTAGCCTTACACAGGTCTTTTCTCTGTCTCTGGAGGATAATTTGAAGCCCAAATACATGTATCTGATCAATGAACTCCGTAATGAAGTGAAATCACTGACCAAGTATCCCATGTATCTAAGCTTGTCCTTGGATCAGAGAATTCGACCTCGACACCGGTTCCTAGTTTCTCTTAAGAAAGCACCCAAGGGTCCGTTCCCTTTAAGTTCCTTTGTTCCAACTGATGAATGCTTTTGTGAGCAGTGGGCTGAAACCAGCCTAGATAAGTATCTTGAATTTAGGAAGAGATTACTATTGAAGGAGTTTGCGGAGAAATATGAAAGAAGACGATAA

Protein sequence

MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEFSSDGDDDDAWPDNGDFSDVEYDAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAFLLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILVQRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSEILKVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Homology
[Close]
BLAST of CsaV3_7G018450 vs. NCBI nr
Match: XP_004151387.1 (PREDICTED: uncharacterized protein LOC101207692 [Cucumis sativus] >KGN44058.1 hypothetical protein Csa_7G154490 [Cucumis sativus])

HSP 1 Score: 608.2 bits (1567), Expect = 2.6e-170
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK 60
           MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK
Sbjct: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK 60

Query: 61  PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT 120
           PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT
Sbjct: 61  PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT 120

Query: 121 RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT 180
           RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT
Sbjct: 121 RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT 180

Query: 181 GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN 240
           GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN
Sbjct: 181 GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN 240

Query: 241 VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX 300
           VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS 480
           XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS
Sbjct: 421 XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS 480

Query: 481 SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 481 SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 521

[Close]
BLAST of CsaV3_7G018450 vs. NCBI nr
Match: XP_008462974.1 (PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo])

HSP 1 Score: 459.1 bits (1180), Expect = 1.9e-125
Identity = 417/532 (78.38%), Postives = 429/532 (80.64%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSS----------FGSRSRRRNVPRFVVR 60
           MASLSLFSFSPTLHS FPSSSDFY  SQFLLTSS           GSRSRRRNV RFVVR
Sbjct: 1   MASLSLFSFSPTLHSDFPSSSDFYFSSQFLLTSSTSASSFRAVPIGSRSRRRNVRRFVVR 60

Query: 61  STHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEFS-XXXXXXXXXXXXGDFSDVEYDA 120
           STHS+A ILKPK RSRFG+TLSP+D+DEDG DV+EFS XXXXXXXX    GDFSDVEYDA
Sbjct: 61  STHSNATILKPKWRSRFGQTLSPYDTDEDGDDVEEFSXXXXXXXXXWLDNGDFSDVEYDA 120

Query: 121 KRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDF 180
           KRKRAK Q           N+RHP                          ITNDTVK DF
Sbjct: 121 KRKRAKSQXXXXXXXXXXGNLRHPXXXXXXXXXXXXXXXXXXXXXXXXXXITNDTVKQDF 180

Query: 181 NIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQM 240
           N+D+EV ST+TGRKGK+MTKKSMEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQM
Sbjct: 181 NVDKEVRSTHTGRKGKMMTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQM 240

Query: 241 YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX 300
           YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX
Sbjct: 241 YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LLPRINFLRSI         
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLLPRINFLRSIGMRNSEILK 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXL 480
                                MYLINELRNEV       XXXXXXXXXXXXXXXXXXX L
Sbjct: 421 VSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPXXXXXXXXXXXXXXXXXXXSL 480

Query: 481 KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 481 KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 532

[Close]
BLAST of CsaV3_7G018450 vs. NCBI nr
Match: XP_022139658.1 (transcription termination factor MTERF9, chloroplastic [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 3.3e-109
Identity = 430/521 (82.53%), Postives = 455/521 (87.33%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFG-SRSRRRNVPRFVVRSTHSSAAIL 60
           MASL L SFSPT++S FPSSSDFYL +QF L+SS   S+ RRR+V  FVVRSTHS+A +L
Sbjct: 1   MASLFLSSFSPTIYSDFPSSSDFYLSAQFPLSSSSSVSKFRRRSVRGFVVRSTHSNARLL 60

Query: 61  KPKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSK 120
           KPKRRSRFG+ LSPFD            XXXXXXXXXXXX                    
Sbjct: 61  KPKRRSRFGQILSPFDC---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTN 180
             NN SQRDN+RHPRESRGI+SSN GKSFKVK++HLDFQD+ NDT K DF+I+EEV ST+
Sbjct: 121 XXNNGSQRDNLRHPRESRGIRSSNSGKSFKVKADHLDFQDLVNDTDKQDFSIEEEVRSTS 180

Query: 181 TGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQI 240
              KGK+MTKKSME RFPRLAEEI+LD+KWFPLL+YLTTFGLKESHFLQMYERHMPSLQI
Sbjct: 181 INGKGKLMTKKSMETRFPRLAEEIELDDKWFPLLDYLTTFGLKESHFLQMYERHMPSLQI 240

Query: 241 NVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXX 300
           NV SAQERLEYLLSVGVKQRDVRR+LLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXX
Sbjct: 241 NVLSAQERLEYLLSVGVKQRDVRRMLLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFL   XXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPL 480
           XXXXXXXXXXX   INELRNEV XXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPL
Sbjct: 421 XXXXXXXXXXXXXXINELRNEVQXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPL 480

Query: 481 SSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 521
           SS VPTDECFC+QWAETSLDKYLEFR+RLLLKEFA+KYERR
Sbjct: 481 SSLVPTDECFCQQWAETSLDKYLEFRQRLLLKEFAQKYERR 518

[Close]
BLAST of CsaV3_7G018450 vs. NCBI nr
Match: XP_022976275.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 421/536 (78.54%), Postives = 445/536 (83.02%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGS-----------RSRRRNVPRFVV 60
           MASL LFSFSPT+HS FPSSSDFY  +QF  ++S  +           R RRR+V RF+V
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFSYSTSTSACKFHGVGIASGRRRRRSVRRFLV 60

Query: 61  RSTHSSAAILKPKRRSRFGRTLSPFDS----DEDGYDVDEFSXXXXXXXXXXXXGDFSDV 120
           RSTHS+A ILKPKRRSRFG+ LSPFDS               XXXXXXXXXXXX   SDV
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSDV 120

Query: 121 EYDAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTV 180
           EY                 SQRDN+RHPRESRGI+S          SN  D QDITNDT 
Sbjct: 121 EYXXXXXXXXXXXXXXXXXSQRDNLRHPRESRGIRS----------SNRFDLQDITNDTE 180

Query: 181 KHDFNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESH 240
             D  I+EE  STN  ++GK+MTKK++E RFPRLAEEI+LD+KW+PLL+YLTTFGLKESH
Sbjct: 181 NQDDTIEEEAGSTNVDKQGKLMTKKAIENRFPRLAEEIELDKKWYPLLDYLTTFGLKESH 240

Query: 241 FLQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXX 300
           FLQMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQILEYTVE    XXXX
Sbjct: 241 FLQMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVEXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLR  XXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXX  LINELRNEVXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           XXXLKKAPKGPFPLSSFVPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 481 XXXLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 526

[Close]
BLAST of CsaV3_7G018450 vs. NCBI nr
Match: XP_023536515.1 (transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98
Identity = 422/534 (79.03%), Postives = 442/534 (82.77%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSS----------FGS-RSRRRNVPRFVV 60
           MASL LFSFSPT+HS FPSSSDFY  +QF  TSS           GS R RRR+V RF+V
Sbjct: 1   MASLFLFSFSPTIHSDFPSSSDFYPSTQFSYTSSTSACKFHGVGIGSRRRRRRSVRRFLV 60

Query: 61  RSTHSSAAILKPKRRSRFGRTLSPFDSD--EDGYDVDEFSXXXXXXXXXXXXGDFSDVEY 120
           RSTHS+A ILKPKRRSRFG+ LSPFDSD            XXXXXXXXXXXX        
Sbjct: 61  RSTHSNARILKPKRRSRFGQNLSPFDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 DAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKH 180
                            SQRDN+RHPRESRGI+S          SN  D QDITNDT   
Sbjct: 121 XXXXXXXXXXXXXXXXXSQRDNLRHPRESRGIRS----------SNRFDLQDITNDTENQ 180

Query: 181 DFNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFL 240
           D  I+EE  STN  ++GK+MTKK+ME RFPRLAEEI+LD+KW+PLL+YLTTFGLKESHFL
Sbjct: 181 DDTIEEEAGSTNVDKQGKLMTKKAMENRFPRLAEEIELDKKWYPLLDYLTTFGLKESHFL 240

Query: 241 QMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXX 300
           QMYER MPSLQINV SAQERLEYLLSVGVKQRDVRRIL+RQPQILEYTVE    XXXXXX
Sbjct: 241 QMYERRMPSLQINVNSAQERLEYLLSVGVKQRDVRRILMRQPQILEYTVEXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLR  XXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXX  LINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           XLKKAPKGPFPLSSFVPTDECFC+QWAETSLDKYLEFRKRLLLKEFA+KYERRR
Sbjct: 481 XLKKAPKGPFPLSSFVPTDECFCQQWAETSLDKYLEFRKRLLLKEFAQKYERRR 524

[Close]
BLAST of CsaV3_7G018450 vs. TAIR10
Match: AT5G55580.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-55
Identity = 315/522 (60.34%), Postives = 365/522 (69.92%), Query Frame = 0 

Query: 1   MASLSLFSF-SPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAIL 60
           MA  SL+ F +P +    PS S  ++        S  +R   R    FVV   HS+  I+
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESPLFVLGSD--KCSPATRRPSRKTRGFVVTYAHSNPKII 60

Query: 61  KPKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDV-EYDAKRKRAKLQS 120
            PK++SR+G+TLSP+DS           XXXXXXXXXXXX  F++V EY+  +K+ K   
Sbjct: 61  NPKKKSRYGQTLSPYDS-----XXXXXXXXXXXXXXXXXXXXFAEVTEYE--KKKPKSHK 120

Query: 121 KTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCST 180
           +T    S +  +  P ES   ++  D     +  N       T++  K  + +D      
Sbjct: 121 QTIAKKSVKKGIVKPEES---ETDEDDLDLGISPN------ATSEKKKESWRLD------ 180

Query: 181 NTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQ 240
               +GK+ ++K +E  +PRLAEEID+D K  PLL+YL+TFGLKESHF+QMYERHMPSLQ
Sbjct: 181 ---GRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQ 240

Query: 241 INVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXX 300
           INV+SAQERL+YLLSVGVK RD++R+LLRQPQIL+YTVENNLK XXXXXXXXXXXXXXXX
Sbjct: 241 INVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXX EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        RSI                  
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSIGMCNSDILKVLTSLTQVL 420

Query: 421 XXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFP 480
                       MYL+NEL NEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKK  KGPFP
Sbjct: 421 SLSLEDNLKPKYMYLVNELNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKVRKGPFP 480

Query: 481 LSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 521
           LSS VP DE FC+QWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 LSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]
BLAST of CsaV3_7G018450 vs. Swiss-Prot
Match: sp|Q9FM80|MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.7e-54
Identity = 315/522 (60.34%), Postives = 365/522 (69.92%), Query Frame = 0 

Query: 1   MASLSLFSF-SPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAIL 60
           MA  SL+ F +P +    PS S  ++        S  +R   R    FVV   HS+  I+
Sbjct: 1   MAGFSLYCFKNPRILFTLPSESPLFVLGSD--KCSPATRRPSRKTRGFVVTYAHSNPKII 60

Query: 61  KPKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDV-EYDAKRKRAKLQS 120
            PK++SR+G+TLSP+DS           XXXXXXXXXXXX  F++V EY+  +K+ K   
Sbjct: 61  NPKKKSRYGQTLSPYDS-----XXXXXXXXXXXXXXXXXXXXFAEVTEYE--KKKPKSHK 120

Query: 121 KTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCST 180
           +T    S +  +  P ES   ++  D     +  N       T++  K  + +D      
Sbjct: 121 QTIAKKSVKKGIVKPEES---ETDEDDLDLGISPN------ATSEKKKESWRLD------ 180

Query: 181 NTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQ 240
               +GK+ ++K +E  +PRLAEEID+D K  PLL+YL+TFGLKESHF+QMYERHMPSLQ
Sbjct: 181 ---GRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQ 240

Query: 241 INVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXX 300
           INV+SAQERL+YLLSVGVK RD++R+LLRQPQIL+YTVENNLK XXXXXXXXXXXXXXXX
Sbjct: 241 INVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXX EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        RSI                  
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSIGMCNSDILKVLTSLTQVL 420

Query: 421 XXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFP 480
                       MYL+NEL NEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKK  KGPFP
Sbjct: 421 SLSLEDNLKPKYMYLVNELNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKVRKGPFP 480

Query: 481 LSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 521
           LSS VP DE FC+QWA TS+D YL FR+RLLLKEFA KY++R
Sbjct: 481 LSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFANKYDKR 495

[Close]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match: tr|A0A0A0K3I9|A0A0A0K3I9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.7e-170
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK 60
           MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK
Sbjct: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK 60

Query: 61  PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT 120
           PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT
Sbjct: 61  PKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXGDFSDVEYDAKRKRAKLQSKT 120

Query: 121 RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT 180
           RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT
Sbjct: 121 RNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNT 180

Query: 181 GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN 240
           GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN
Sbjct: 181 GRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQIN 240

Query: 241 VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX 300
           VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS 480
           XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS
Sbjct: 421 XXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLS 480

Query: 481 SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 481 SFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 521

[Close]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match: tr|A0A1S3CI38|A0A1S3CI38_CUCME (transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501230 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 417/532 (78.38%), Postives = 429/532 (80.64%), Query Frame = 0 

Query: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSS----------FGSRSRRRNVPRFVVR 60
           MASLSLFSFSPTLHS FPSSSDFY  SQFLLTSS           GSRSRRRNV RFVVR
Sbjct: 1   MASLSLFSFSPTLHSDFPSSSDFYFSSQFLLTSSTSASSFRAVPIGSRSRRRNVRRFVVR 60

Query: 61  STHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEFS-XXXXXXXXXXXXGDFSDVEYDA 120
           STHS+A ILKPK RSRFG+TLSP+D+DEDG DV+EFS XXXXXXXX    GDFSDVEYDA
Sbjct: 61  STHSNATILKPKWRSRFGQTLSPYDTDEDGDDVEEFSXXXXXXXXXWLDNGDFSDVEYDA 120

Query: 121 KRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDF 180
           KRKRAK Q           N+RHP                          ITNDTVK DF
Sbjct: 121 KRKRAKSQXXXXXXXXXXGNLRHPXXXXXXXXXXXXXXXXXXXXXXXXXXITNDTVKQDF 180

Query: 181 NIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQM 240
           N+D+EV ST+TGRKGK+MTKKSMEIRFPRLAEEI+LDEKWFPLL+YLTTFGLKESHFLQM
Sbjct: 181 NVDKEVRSTHTGRKGKMMTKKSMEIRFPRLAEEIELDEKWFPLLDYLTTFGLKESHFLQM 240

Query: 241 YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX 300
           YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX
Sbjct: 241 YERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LLPRINFLRSI         
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLLPRINFLRSIGMRNSEILK 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXL 480
                                MYLINELRNEV       XXXXXXXXXXXXXXXXXXX L
Sbjct: 421 VSTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPXXXXXXXXXXXXXXXXXXXSL 480

Query: 481 KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 522
           KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR
Sbjct: 481 KKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERRR 532

[Close]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match: tr|A0A2I4F009|A0A2I4F009_9ROSI (transcription termination factor MTERF9, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC108994295 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.4e-78
Identity = 361/502 (71.91%), Postives = 394/502 (78.49%), Query Frame = 0 

Query: 27  SQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEF 86
           S F+  S  G    R    RFV  STHS+  ILK  RRSR+G  LSPFD+D+   +    
Sbjct: 31  SNFIGGSGGGIVKPRGRTCRFVALSTHSTPRILKSNRRSRYGHLLSPFDTDD---EXXXX 90

Query: 87  SXXXXXXXXXXXXGDFS-DVEYDAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDG 146
            XXXXXXXXXXXX DF+   E D K KR K Q +TR         R P      ++S  G
Sbjct: 91  XXXXXXXXXXXXXXDFAKTAELDLKGKRLKSQHETRKGKQ-----RQPERDWSFRASKPG 150

Query: 147 KSFKVKSNHLDFQDITNDTVK-------HDFNIDEEVCSTNTGRKGKVMTKKSMEIRFPR 206
           +S K+  + LD ++  N   +       HDFN  EE+ S +   +GK+MT+KSME ++PR
Sbjct: 151 QSLKIDEDQLDARNDENTIQRSDIGDSYHDFNETEEIRSVDMNGRGKLMTRKSMENKYPR 210

Query: 207 LAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINVYSAQERLEYLLSVGVKQ 266
           L EEIDLD+KW PLL+YLTTFGLKESHF+QMYERHMPSLQINV SA+ERLEYLLS+GVK 
Sbjct: 211 LCEEIDLDKKWLPLLDYLTTFGLKESHFIQMYERHMPSLQINVCSARERLEYLLSIGVKH 270

Query: 267 RDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
           RDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 271 RDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 330

Query: 327 XXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 386
           XXXXX EE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 331 XXXXXVEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 390

Query: 387 XXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYLINELR 446
           XXXXXXXXX  LLPRINFLR I       XXXXXXXXXXXXXXXXXXX    MYLINELR
Sbjct: 391 XXXXXXXXXDGLLPRINFLRGIGMCNSDIXXXXXXXXXXXXXXXXXXXKPKYMYLINELR 450

Query: 447 NEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLSSFVPTDECFCEQWAETSL 506
           NEV  XXXXXXXXXXXXXXXXXXXXXXXX LKKAPKGPFPLSS VPTDECFC+QWA TSL
Sbjct: 451 NEVHSXXXXXXXXXXXXXXXXXXXXXXXXALKKAPKGPFPLSSLVPTDECFCQQWAGTSL 510

Query: 507 DKYLEFRKRLLLKEFAEKYERR 521
           DKYL FR+RLLLKEFA+KYE++
Sbjct: 511 DKYLAFRQRLLLKEFAKKYEKK 524

[Close]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match: tr|A0A2I4E038|A0A2I4E038_9ROSI (transcription termination factor MTERF9, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108985062 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71
Identity = 374/532 (70.30%), Postives = 406/532 (76.32%), Query Frame = 0 

Query: 1   MAS-LSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAIL 60
           MAS LSL+ F+ T            +   F      G   RR +  RF VRSTHSS  IL
Sbjct: 1   MASFLSLYPFNTTPPFSLNVFDTHLIVQSFSSLIGEGIVKRRSSGHRFEVRSTHSSPRIL 60

Query: 61  KPKRRSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXG-DFSD-VEYDAKRKRAKLQ 120
           K  RRSR+G+ LSPFDS           XXXXXXXXXXX   DF++  E+D   KR K +
Sbjct: 61  KSNRRSRYGQALSPFDSXXXXXXXXXXXXXXXXXXXXXXPNDDFAETAEFDVNGKRVKSE 120

Query: 121 S--KTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHL-------DFQDITNDTVKHD 180
           +  KTR  N      R   + RGI SS  G++ KV  + L        FQ        HD
Sbjct: 121 NGYKTRKGNQ-----RQSEKDRGIGSSMFGENLKVDEDQLYVRNGKSTFQRSDIGGCYHD 180

Query: 181 FNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQ 240
               EEV S +   +GK+MT+K ME ++PRL EEIDLD++  PLL+YLTTFGLKESHF+Q
Sbjct: 181 SKRTEEVRSLDMNGRGKLMTRKFMEDKYPRLYEEIDLDKRCMPLLDYLTTFGLKESHFIQ 240

Query: 241 MYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXX 300
           MYERHMPSLQINV SAQERLEYLLSVGVK RDVRRILLRQPQILEYTVENNLKXXXXXXX
Sbjct: 241 MYERHMPSLQINVCSAQERLEYLLSVGVKHRDVRRILLRQPQILEYTVENNLKXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LLPRINFLR I     XXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDGLLPRINFLRGIGMGDSXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXX  MYLINEL NEVXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXKYMYLINELHNEVXXXXXXXXXXXXXXXXXXXXXXXXXXA 480

Query: 481 LKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 521
           LKKAP+GPFPLSS VPTDECFC+QWA TSLD YLEFR+RLLLK+FA+KYE++
Sbjct: 481 LKKAPEGPFPLSSLVPTDECFCQQWAGTSLDAYLEFRQRLLLKKFAKKYEKK 527

[Close]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match: tr|A0A251PPZ3|A0A251PPZ3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G234400 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 326/519 (62.81%), Postives = 366/519 (70.52%), Query Frame = 0 

Query: 7   FSFSPTLHSHFPSSSDFYLPSQFLLT--SSFGSRSRRRNVP-RFVVRSTHSSAAILKPKR 66
           FS  P+     P S   Y  S+F +T  SS   R RR     R VV STHS+  ILK  R
Sbjct: 4   FSLCPSSSYPPPPSFKLYHKSRFTVTTLSSLCGRKRRSGSSCRLVVLSTHSNPKILKSNR 63

Query: 67  RSRFGRTLSPFDSDEDGYDVDEFSXXXXXXXXXXXXG-DFSDV-EYDAKRKRAKLQSKTR 126
           RSR+G+ LSP+D D+D    +E S              DF+++ E+D  RKR+K      
Sbjct: 64  RSRYGQPLSPYDQDDD----EEVSRASDVSDDDWLLNDDFAEISEFDVNRKRSKSHKGFA 123

Query: 127 NNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVKHDFNIDEEVCSTNTG 186
           N +S   N +H  E               KSN  ++   +N T         +V S +  
Sbjct: 124 NGHSDGRNSKHTLE---------------KSNAANYYSSSNQT--------NDVSSLDVP 183

Query: 187 RKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHFLQMYERHMPSLQINV 246
           RKGK+ T+K+ME RFPRL+EE++LDEKW PL++YL++FGLKESHF+QMYERHMPSLQINV
Sbjct: 184 RKGKLSTRKAMEDRFPRLSEEVELDEKWLPLIDYLSSFGLKESHFIQMYERHMPSLQINV 243

Query: 247 YSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKXXXXXXXXXXXXXXXXXXXX 306
            SA+ERLEYLLSVGVKQRDVRR+LLRQPQILEYTVENNL XXXXXXXXXXXXXXXXXXXX
Sbjct: 244 CSAKERLEYLLSVGVKQRDVRRMLLRQPQILEYTVENNLXXXXXXXXXXXXXXXXXXXXX 303

Query: 307 XXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
           XXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363

Query: 367 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRINFLRSIXXXXXXXXXXXXXXXXXXXXX 426
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX         SI                     
Sbjct: 364 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGMCNADILKVLTSLTQVLSLS 423

Query: 427 XXXXXXXXXMYLINELRNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKAPKGPFPLSS 486
                     YL+NEL NEV  XXXXXXXXXXXXXXXXXXXXXXXX LKKAPKGPFPLSS
Sbjct: 424 LEENLKPKYKYLVNELHNEVHSXXXXXXXXXXXXXXXXXXXXXXXXSLKKAPKGPFPLSS 483

Query: 487 FVPTDECFCEQWAETSLDKYLEFRKRLLLKEFAEKYERR 521
            VPTDECFC+QWA TSLDKYL+FR+RLLLKEFA+KYER+
Sbjct: 484 LVPTDECFCQQWAGTSLDKYLDFRQRLLLKEFAKKYERK 495

The following BLAST results are available for this feature:
BLAST of CsaV3_7G018450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151387.12.6e-170100.00PREDICTED: uncharacterized protein LOC101207692 [Cucumis sativus] >KGN44058.1 hy... [more]
XP_008462974.11.9e-12578.38PREDICTED: transcription termination factor MTERF9, chloroplastic [Cucumis melo][more]
XP_022139658.13.3e-10982.53transcription termination factor MTERF9, chloroplastic [Momordica charantia][more]
XP_022976275.14.1e-9978.54transcription termination factor MTERF9, chloroplastic [Cucurbita maxima][more]
XP_023536515.17.7e-9879.03transcription termination factor MTERF9, chloroplastic [Cucurbita pepo subsp. pe... [more]
BLAST of CsaV3_7G018450 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G55580.12.6e-5560.34Mitochondrial transcription termination factor family protein[more]
BLAST of CsaV3_7G018450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FM80|MTEF9_ARATH4.7e-5460.34Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of CsaV3_7G018450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K3I9|A0A0A0K3I9_CUCSA1.7e-170100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G154490 PE=4 SV=1[more]
tr|A0A1S3CI38|A0A1S3CI38_CUCME1.3e-12578.38transcription termination factor MTERF9, chloroplastic OS=Cucumis melo OX=3656 G... [more]
tr|A0A2I4F009|A0A2I4F009_9ROSI3.4e-7871.91transcription termination factor MTERF9, chloroplastic isoform X1 OS=Juglans reg... [more]
tr|A0A2I4E038|A0A2I4E038_9ROSI1.4e-7170.30transcription termination factor MTERF9, chloroplastic-like OS=Juglans regia OX=... [more]
tr|A0A251PPZ3|A0A251PPZ3_PRUPE9.4e-6862.81Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G234400 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048731 system development
biological_process GO:0009658 chloroplast organization
biological_process GO:0009651 response to salt stress
biological_process GO:0048364 root development
biological_process GO:0048367 shoot system development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G018450.1CsaV3_7G018450.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 408..440
e-value: 0.072
score: 22.2
coord: 372..403
e-value: 2.9E-6
score: 36.8
coord: 441..472
e-value: 8.6E-4
score: 28.6
coord: 298..330
e-value: 9.3E-5
score: 31.8
coord: 262..293
e-value: 7.0E-5
score: 32.2
coord: 335..367
e-value: 2.6
score: 17.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 213..281
e-value: 1.1E-6
score: 27.8
coord: 273..470
e-value: 2.4E-38
score: 131.8
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 272..508
e-value: 5.9E-54
score: 185.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..147
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 37..519
NoneNo IPR availablePANTHERPTHR13068:SF13TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTICcoord: 37..519