CsaV3_6G041920 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAATATATAATTGATTAGCATGCAATAGCTATATACACACAGAAGAAGTACTGATAGATGTGTTGTAAAACATGAGTTTAGATGATATGGAAAAAAAAATGGATTCAAAGAAGCCTTATTTTGGAGCTCTTGTTTGTCAATTAACATTTGCTGGGATGAGTTTATTCTCAAAGGCTGCCTTTGTTTCTGGTATGAATACTTATATTTTTCTTTTCTACAGGCAAGCTTTTGGCAGTATCGTCTTACTTCCTCTCACCATTTATTTTGCAAGGTAAGTAAATACTCCATATTATTACTCCTAAATCCTTTTGTTTTATTTTTCTATGGTTTGATTTACAAGTGTGGGTTGAAACAACGACCAAAATATCTATCTTAAACCAATGTCGCGTTTAGGAAAGTAATCAATTATCAATCGTAAGGACTCACACGAAGTCTTGTTTTGGGAGAAACCAAAACCAGTGATCACTCCCAAGTGAACACACAATTGAGATTATTATTTGATTTCCAACATCTCTACAGCAGTTATTTTTTCTGTTTTTACCTTGTATTAGATTCATGCTTCATATAAATTTAACCCATCTCATAACTCATCTTTGTAGCTTCAAGAAAATAAACTCCTTCTTCCCGTCGATGTAGGCCATAGTTTGCCCAACCACGTACATCTTTGTCTTCCTCTTCTTCTTCCCTTTTACATTTCTGCCTTTGCTGTGTAATTTCTTCTTCTTTTTCTTGCTGAAAATCGCCATGGAAGATTGAAGGTTTTAGTCTACCAAACAAACAAAGAGAAAGAGAACAACTTTACCCGTGTGCTGTAAACATAAAATAAAGAAAGAAGAAAAGAGAGAGGGTGTAAACGTGTGAGGAGTAGCATAGGGCAGAGACGTGACTTTTTCTCTTTGTTACATGGGAGTATTATTGAGGGAGAGTGCGATAGAAGTGTTTCATATTAACTAAGAAAGAATCGAGAGACATATTTTCATCGACATGCAACCAATCTTTGAAGTGAAATTAAAGTTAAATCATAAAATACTTATGCTAGGAGTTAACAAAAAAGAAAGAGAGATCTAACCAATTTGTTTGTTTCTTCTTCTTTTTCTTTCCATGGAGTATTATCGCAGAAAGGAGATGAGAAGTTTGTCAAAAGCAGATGTGATGAAGATTTTCTTGCAGGGCCTTTTGGGGTTTGTACACAATTAATTAATTATATTACAAACTATTTCAATTCTTTTAATTTAACTAATTAAGATTATATTTAATTTGATGAAAGATTTTTGGTTTCTTTATGTGTGTTAAATTAAAAGTGCAGGTTTACCATTGGGTTGAACGTTTATGGATTAGGAGTTAAGTATACATCAGCAACTTTGGGAGCCGCAGCCTTTAATTGTGTTCCTGTTACTACATTCTTCTTTGCTCTTCTTTCAAGGTTCATTAACATTATTATCATTAATTTAGCTTTTTCGTAGGTAATTAAGATCTCCTTGAATTGGCTTTTTAGGAAACGTTTTAAAAATAATTTTTTTTATTTAAATTCTTTTGATGAAAATTGTTTAAAATATCTTTTAAATAATTATTTTGAATATTTGTGAAACAGTACAATCTTCTCTTTTCTATATTAAAGACTTAAAAATATATTTCTAGTCTTCTCTAAACTAAAGAGAAAAAGAATTCAAAAGTATACCTTACCAAAAGTTATCTGTTTTTTTTTTTTTTTGTAATAGTGATTTTAATTTGTTAACCAACATATGGAAAATCTAGTAGTGGGAAAAAAAATAGTTTTAGCCATTCAAAATGGGTATGGAATTTATACCAAGTGGATGCACTACTTTAATGAAACCAAAGAACAAATAGAATATATAATTTGTCTGGCCGGTGATTAAACTATGAACACTACTACTTTCTAAAACTAGTTTGCTATACGATATTATCTTAAACTACAACAGGTCGTTAGTTCAAAAGCATAAACTCATGGTGAGCATAAATTTAATTATATCCTCCAACAATTACACATATTTGTATTATTGTTCATAGGATGGAGAAGGTAAATATAAGAAAAGCAAGTGGAATGGCAAAGGTTGGAGGCATAATATTGTGCATTGCTGGTGTTGCAGTTCTTGCATTTTACAAAGGCCCTTATTTGAAACCACTCTTCAATTTTCACCTTTTTCAAACGCAACAATCCCACGTTTCTTCCAAAAAAGAATGGATTCTTGGCTGTTTCTTGCTCTTCCTTACTTGCCTTACATGGGGCTTGTGGTATGTTCTTCAGGTAATTAATATATATTTTCAATATTATCCTAAATTTTATATGTGTTCTTTGTCGTATTACATTTTGGTATATTTCAAGTTCCACTCATCTTTTTTGTAACTCACGCAAAACTTGATCCGAATAACTGAGAGTGGATTAGAAAAAGTTAAGTAGACACAACTCACATCTAAATATTTGTTTCTTTATAATATTTAGTTTGATATACGTCATATTTTACTTTCAGGCTTGGGTTTTGAGAAGTTGTCCATCTCCACTTGTGTTAACATTTGGACAAACATTTTCAAGTGCCATTCAATCATTTGTTGTGGCTATTGCAATTGAAAGAAACCCTTCGGAATGGAAGTTGGGTTGGAACATTTCCCTAGCTGCTATTCTTTATTGCGTATGATTTTTTCTTTTATTAATTTTCTTTTGGGAGTTATGAGGATTATTCCAACCTCTAATCCTTTATATTATATGAATACGTATCCAATTATTTTTGAGCTACAACCTTGTTGTTTGGATTTGCAGGGAACTTTCGTAATTCCTGTTGGAAACTATTTGTCAAGTTGGGTGGTAAAAAAGAAAGGTCCAGTTTTTCAAGCTGTTACCACACCTTTTAATCTCATTTTCACACTCATTGGTTCTGAATTTCTTTTAAATGATGGAATTAGCTTGGGAAGGTAATTGGAAACCAATCAATTTATTGATTTAAAATCGTCTGCTCCTTATTAATAATGTTTTGAATTTGTTTAAATATGGTTTTTTTTTCTTGTGTGGTGAACAGCATAATTGGTGCCATACTGTTGGTGTTGAGCCTTTATAGTGTTTTATGGGGAAAAAAGAAGGAAGCGAGTTGTTTTGATACAGAAAACAACACTAATGTTGTTCCAACGGAAACGAAAACGTTAAATAACATTTAAATTTTGTAGAATCACGTAATTGTTGATGTTCTTATTGAGTTGTACTTAAATGAGCTATCATTATAAAACATATTATCCTATCGACTTTTCTTCTATCATTTTTTCTTTTTATATTTTGTTTGTTAAAGTAAAAGTTTCATCAAACTCTAGTTTAAGATTTGATGTACATTAATTTTAATCAATTTGTGTTTAAATGGCCGTTT ATGAGTTTAGATGATATGGAAAAAAAAATGGATTCAAAGAAGCCTTATTTTGGAGCTCTTGTTTGTCAATTAACATTTGCTGGGATGAGTTTATTCTCAAAGGCTGCCTTTGTTTCTGGTATGAATACTTATATTTTTCTTTTCTACAGGCAAGCTTTTGGCAGTATCGTCTTACTTCCTCTCACCATTTATTTTGCAAGAAAGGAGATGAGAAGTTTGTCAAAAGCAGATGTGATGAAGATTTTCTTGCAGGGCCTTTTGGGGTTTACCATTGGGTTGAACGTTTATGGATTAGGAGTTAAGTATACATCAGCAACTTTGGGAGCCGCAGCCTTTAATTGTGTTCCTGTTACTACATTCTTCTTTGCTCTTCTTTCAAGGATGGAGAAGGTAAATATAAGAAAAGCAAGTGGAATGGCAAAGGTTGGAGGCATAATATTGTGCATTGCTGGTGTTGCAGTTCTTGCATTTTACAAAGGCCCTTATTTGAAACCACTCTTCAATTTTCACCTTTTTCAAACGCAACAATCCCACGTTTCTTCCAAAAAAGAATGGATTCTTGGCTGTTTCTTGCTCTTCCTTACTTGCCTTACATGGGGCTTGTGGTATGTTCTTCAGGCTTGGGTTTTGAGAAGTTGTCCATCTCCACTTGTGTTAACATTTGGACAAACATTTTCAAGTGCCATTCAATCATTTGTTGTGGCTATTGCAATTGAAAGAAACCCTTCGGAATGGAAGTTGGGGAACTTTCGTAATTCCTGTTGGAAACTATTTGTCAAGTTGGGTGGTAAAAAAGAAAGGTCCAGTTTTTCAAGCTGTTACCACACCTTTTAA ATGAGTTTAGATGATATGGAAAAAAAAATGGATTCAAAGAAGCCTTATTTTGGAGCTCTTGTTTGTCAATTAACATTTGCTGGGATGAGTTTATTCTCAAAGGCTGCCTTTGTTTCTGGTATGAATACTTATATTTTTCTTTTCTACAGGCAAGCTTTTGGCAGTATCGTCTTACTTCCTCTCACCATTTATTTTGCAAGAAAGGAGATGAGAAGTTTGTCAAAAGCAGATGTGATGAAGATTTTCTTGCAGGGCCTTTTGGGGTTTACCATTGGGTTGAACGTTTATGGATTAGGAGTTAAGTATACATCAGCAACTTTGGGAGCCGCAGCCTTTAATTGTGTTCCTGTTACTACATTCTTCTTTGCTCTTCTTTCAAGGATGGAGAAGGTAAATATAAGAAAAGCAAGTGGAATGGCAAAGGTTGGAGGCATAATATTGTGCATTGCTGGTGTTGCAGTTCTTGCATTTTACAAAGGCCCTTATTTGAAACCACTCTTCAATTTTCACCTTTTTCAAACGCAACAATCCCACGTTTCTTCCAAAAAAGAATGGATTCTTGGCTGTTTCTTGCTCTTCCTTACTTGCCTTACATGGGGCTTGTGGTATGTTCTTCAGGCTTGGGTTTTGAGAAGTTGTCCATCTCCACTTGTGTTAACATTTGGACAAACATTTTCAAGTGCCATTCAATCATTTGTTGTGGCTATTGCAATTGAAAGAAACCCTTCGGAATGGAAGTTGGGGAACTTTCGTAATTCCTGTTGGAAACTATTTGTCAAGTTGGGTGGTAAAAAAGAAAGGTCCAGTTTTTCAAGCTGTTACCACACCTTTTAA MSLDDMEKKMDSKKPYFGALVCQLTFAGMSLFSKAAFVSGMNTYIFLFYRQAFGSIVLLPLTIYFARKEMRSLSKADVMKIFLQGLLGFTIGLNVYGLGVKYTSATLGAAAFNCVPVTTFFFALLSRMEKVNIRKASGMAKVGGIILCIAGVAVLAFYKGPYLKPLFNFHLFQTQQSHVSSKKEWILGCFLLFLTCLTWGLWYVLQAWVLRSCPSPLVLTFGQTFSSAIQSFVVAIAIERNPSEWKLGNFRNSCWKLFVKLGGKKERSSFSSCYHTF
BLAST of CsaV3_6G041920 vs. NCBI nr
Match: XP_004148640.1 (PREDICTED: WAT1-related protein At5g64700 [Cucumis sativus]) HSP 1 Score: 491.1 bits (1263), Expect = 2.5e-135 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. NCBI nr
Match: XP_008441006.1 (PREDICTED: WAT1-related protein At5g64700-like [Cucumis melo]) HSP 1 Score: 451.4 bits (1160), Expect = 2.2e-123 Identity = 224/242 (92.56%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. NCBI nr
Match: KGN48384.1 (hypothetical protein Csa_6G485110 [Cucumis sativus]) HSP 1 Score: 434.5 bits (1116), Expect = 2.7e-118 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. NCBI nr
Match: XP_004148667.2 (PREDICTED: WAT1-related protein At5g64700 isoform X1 [Cucumis sativus] >KGN48385.1 hypothetical protein Csa_6G485120 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103 Identity = 189/242 (78.10%), Postives = 213/242 (88.02%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. NCBI nr
Match: XP_022132854.1 (WAT1-related protein At5g64700-like isoform X1 [Momordica charantia]) HSP 1 Score: 368.2 bits (944), Expect = 2.4e-98 Identity = 180/240 (75.00%), Postives = 210/240 (87.50%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TAIR10
Match: AT5G64700.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 201.4 bits (511), Expect = 7.1e-52 Identity = 112/247 (45.34%), Postives = 148/247 (59.92%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TAIR10
Match: AT5G07050.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-37 Identity = 87/260 (33.46%), Postives = 141/260 (54.23%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TAIR10
Match: AT1G43650.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36 Identity = 87/238 (36.55%), Postives = 129/238 (54.20%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TAIR10
Match: AT4G30420.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-35 Identity = 80/244 (32.79%), Postives = 130/244 (53.28%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TAIR10
Match: AT1G75500.1 (Walls Are Thin 1) HSP 1 Score: 136.7 bits (343), Expect = 2.1e-32 Identity = 84/254 (33.07%), Postives = 128/254 (50.39%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. Swiss-Prot
Match: sp|Q9FGG3|WTR45_ARATH (WAT1-related protein At5g64700 OS=Arabidopsis thaliana OX=3702 GN=At5g64700 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.3e-50 Identity = 112/247 (45.34%), Postives = 148/247 (59.92%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. Swiss-Prot
Match: sp|Q9FL41|WTR38_ARATH (WAT1-related protein At5g07050 OS=Arabidopsis thaliana OX=3702 GN=At5g07050 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.2e-36 Identity = 87/260 (33.46%), Postives = 141/260 (54.23%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. Swiss-Prot
Match: sp|Q6NMB7|WTR7_ARATH (WAT1-related protein At1g43650 OS=Arabidopsis thaliana OX=3702 GN=At1g43650 PE=2 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.4e-35 Identity = 87/238 (36.55%), Postives = 129/238 (54.20%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. Swiss-Prot
Match: sp|Q9M0B8|WTR37_ARATH (WAT1-related protein At4g30420 OS=Arabidopsis thaliana OX=3702 GN=At4g30420 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.9e-34 Identity = 80/244 (32.79%), Postives = 130/244 (53.28%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. Swiss-Prot
Match: sp|Q94AP3|WAT1_ARATH (Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana OX=3702 GN=WAT1 PE=1 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.8e-31 Identity = 84/254 (33.07%), Postives = 128/254 (50.39%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TrEMBL
Match: tr|A0A1S3B374|A0A1S3B374_CUCME (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103485250 PE=3 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 1.4e-123 Identity = 224/242 (92.56%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TrEMBL
Match: tr|A0A0A0KHU9|A0A0A0KHU9_CUCSA (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G485110 PE=3 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.8e-118 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TrEMBL
Match: tr|A0A0A0KF97|A0A0A0KF97_CUCSA (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G485120 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 9.6e-104 Identity = 189/242 (78.10%), Postives = 213/242 (88.02%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TrEMBL
Match: tr|A0A1S3B1Z4|A0A1S3B1Z4_CUCME (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103485246 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 6.3e-79 Identity = 151/244 (61.89%), Postives = 185/244 (75.82%), Query Frame = 0
BLAST of CsaV3_6G041920 vs. TrEMBL
Match: tr|A0A0A0KFR8|A0A0A0KFR8_CUCSA (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G484610 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78 Identity = 155/249 (62.25%), Postives = 192/249 (77.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |