CsaV3_6G031660 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G031660
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 17804458 .. 17804646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

mRNA sequence

ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

Coding sequence (CDS)

ATGGGAGGAAGTGGATGGGTGGAGCTGAGTTGTTTTTACCTTTTTTACATTATGCGGAATTTATGTGGCGAAGATTACTATGCCAACGGAAAGCAAACGTGCAGTGATATAAAATATGATGGAATGATGGGCGTTTCTGATTCCATGTCCGCCTCCGGTTTCTTTTTTTCATTTCAATCAACTATATAA

Protein sequence

MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQSTI
Homology
[Close]
BLAST of CsaV3_6G031660 vs. NCBI nr
Match: KGN47551.1 (hypothetical protein Csa_6G358150 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 7.8e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60
          MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS
Sbjct: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60

Query: 61 TI 63
          TI
Sbjct: 61 TI 62

[Close]
BLAST of CsaV3_6G031660 vs. TrEMBL
Match: tr|A0A0A0KIH6|A0A0A0KIH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358150 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.1e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60
          MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS
Sbjct: 1  MGGSGWVELSCFYLFYIMRNLCGEDYYANGKQTCSDIKYDGMMGVSDSMSASGFFFSFQS 60

Query: 61 TI 63
          TI
Sbjct: 61 TI 62

The following BLAST results are available for this feature:
BLAST of CsaV3_6G031660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47551.17.8e-29100.00hypothetical protein Csa_6G358150 [Cucumis sativus][more]
BLAST of CsaV3_6G031660 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G031660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G031660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KIH6|A0A0A0KIH6_CUCSA5.1e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358150 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G031660.1CsaV3_6G031660.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G031660Watermelon (97103) v2cucwmbB505
CsaV3_6G031660Wax gourdcucwgoB606
CsaV3_6G031660Silver-seed gourdcarcucB0154
CsaV3_6G031660Silver-seed gourdcarcucB0240
CsaV3_6G031660Cucumber (Gy14) v2cgybcucB191
CsaV3_6G031660Cucumber (Gy14) v2cgybcucB298
CsaV3_6G031660Cucumber (Gy14) v1cgycucB078
CsaV3_6G031660Cucumber (Gy14) v1cgycucB416
CsaV3_6G031660Cucurbita maxima (Rimu)cmacucB0224
CsaV3_6G031660Cucurbita maxima (Rimu)cmacucB0951
CsaV3_6G031660Cucurbita moschata (Rifu)cmocucB0213
CsaV3_6G031660Cucurbita moschata (Rifu)cmocucB0938
CsaV3_6G031660Cucurbita pepo (Zucchini)cpecucB0132
CsaV3_6G031660Cucurbita pepo (Zucchini)cpecucB1036
CsaV3_6G031660Wild cucumber (PI 183967)cpicucB245
CsaV3_6G031660Wild cucumber (PI 183967)cpicucB363
CsaV3_6G031660Bottle gourd (USVL1VR-Ls)cuclsiB500
CsaV3_6G031660Melon (DHL92) v3.5.1cucmeB475
CsaV3_6G031660Melon (DHL92) v3.5.1cucmeB515
CsaV3_6G031660Melon (DHL92) v3.6.1cucmedB465
CsaV3_6G031660Melon (DHL92) v3.6.1cucmedB502
CsaV3_6G031660Watermelon (Charleston Gray)cucwcgB514
CsaV3_6G031660Watermelon (97103) v1cucwmB481