CsaV3_6G005360 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G005360
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Carbohydrate esterase
Location	chr6 : 4555342 .. 4556778 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTTTGTTATTGTTTTTCTTTAACTAATATTGATTAAATATAGTCATGATTACACATCATTTGCTATATAGATTTTAGGAAAATAACAATTCCATTATTTTAAGAAAACTAAAATTGTTTTACATGATTTGATAAATTTTAAGAGTGCAACAACATAGGTGGATTACACAAGGGTGGAACCATGTTGTACTTTTCTATTTTTAATGTTTAAAAACAATATCTTTAGAAAACAAAATGCAATTTTGATAGATGGAGATTGAGTTTACAATAACATTCTTGTAATGAGTTTTAAAAATATTACTTGAGGTTTGAACCGATAATTTGATCATTCAATTTTTACTAGCTAAAGAATTGAAAAGTTTTTATAGCATTAAAAATTATGCTATGAAAAATTGTCTTCCTATAAGGTTGAGATATATATATATAAAATAAAAAGTTATTTTTAATAAAAGAATAAAAAATGAAAGACATGAGTCGAAATTTAGCCAAACCAAAACTTAAGTGATTACGATATTAAATTTGAAAACTTCGATTATAAAATGCTACTAAATTTAAACTTGATATATATTTTTGCGATATCTTATATTGATTTGAATGCTAAAAAAATTGGATACAGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA

mRNA sequence

ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA

Coding sequence (CDS)

ATGACGGATTCAATTCTTAGTCCAAAAGCCACAACTTCTCCCAACAACATTTTCATACTCGCCGGGCAGAGCAACATGGCTGGTCGAGGAGGGGTTTCACTAGATCCAACCACAGATAAAATGGTATGGGATGGATATATACCGCTTGAATGCGAATCCAACGACTCAATATTTCGATTGAATGCTGATATGGTATGGGAACAAGCCCATGAACCACTCCATTGGGACATTGATGTTGTAAAGACCAATGGGATTGGACCCGGCATGGCCTTTGCCAATGAGCTTTTGGCTATAGGTGGGAAGAGGATTGGTGCCATTGGCCTTGTTCCATGTGCCATTGGAGGATCCCATTTGAAAGAATGGGTTAAAGGGACTAATAGGTATGATAATTTGGTTGAAAGGATTAGGGCTTCAGAAAAAAATGGAGGGACAGTTCAAGGAATTTTGTGGTATCAAGGAGAGTCTGATGCTGCTGTTGAAGAAGAAGCTATGTGTTATGAAAGAGAGCTCACTAAGTTCTTCATCGACTTGCGTGCTGACACGAACCATCCTGAACTACCCATCATCTTGGTGAAGCTAGTAACTCATGATTTTTTCTTAAGTCCAAATATAAGCTTCAAGGAAGAAGTATGTAATGCTTTGGAGGCAGTCACACACAGACTACCAAACGTAACAATGGTGGACGGTCCCATGGCAGTGGGCAACTTTGACGATGGGCTGAATGAAGATAAAGGTCATCTCAATGTTAAATCTGAAGTCAAATTAGGCAAAATGTTTGCTCATTCCTTTTATTCAAACTTTGCCCACAACTTCCTTTCCTAA

Protein sequence

MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS

Homology

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BLAST of CsaV3_6G005360 vs. NCBI nr
Match: XP_004141016.1 (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus] >KGN46153.1 hypothetical protein Csa_6G058180 [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 9.1e-159
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60
           MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL
Sbjct: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60

Query: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120
           NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE
Sbjct: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120

Query: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180
           WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD
Sbjct: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180

Query: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240
           TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL
Sbjct: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240

Query: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS 274
           NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS
Sbjct: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS 273

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BLAST of CsaV3_6G005360 vs. NCBI nr
Match: XP_008441649.2 (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 5.0e-149
Identity = 255/272 (93.75%), Postives = 264/272 (97.06%), Query Frame = 0


Query: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60
           MTDSILSPKATTSPNNIFILAGQSNMAGRGGVS DPTT+KMVWDGYIPLEC+SNDSIFRL
Sbjct: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSQDPTTEKMVWDGYIPLECQSNDSIFRL 60

Query: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120
           NADMVWE+AHEPLHWDIDVVKTNGIGPGM FANELLAIGGKR GAIGLVPCAIGGSHLKE
Sbjct: 61  NADMVWEKAHEPLHWDIDVVKTNGIGPGMPFANELLAIGGKRAGAIGLVPCAIGGSHLKE 120

Query: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180
           WVKGT+RYDNLVERIRASEK+GG V+G LWYQGESDAAVEEEAMCYERELTKFFIDLRAD
Sbjct: 121 WVKGTDRYDNLVERIRASEKDGGKVKGFLWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180

Query: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240
           TNHP+LPII+VK+VTHDFFLSPNISFKEEV  ALEAVTH LPNVTMVDGPMAVGNFDDGL
Sbjct: 181 TNHPDLPIIMVKIVTHDFFLSPNISFKEEVLKALEAVTHNLPNVTMVDGPMAVGNFDDGL 240

Query: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL 273
           NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL
Sbjct: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL 272

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BLAST of CsaV3_6G005360 vs. NCBI nr
Match: XP_023550941.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 207/260 (79.62%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 10  ATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQA 69
           A TSP NIFILAGQSNMAGRGGVS DPTTDK VWDGYIP E + N SIFR  ADMVWEQA
Sbjct: 2   AATSPANIFILAGQSNMAGRGGVSKDPTTDKNVWDGYIPPESQPNQSIFRFTADMVWEQA 61

Query: 70  HEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYD 129
           HEPLHWDIDVVKTNG+GPGM FANELLA  G  IG IGLVPCAIGGSHL+EWVKGT+RY 
Sbjct: 62  HEPLHWDIDVVKTNGVGPGMPFANELLAKAGPSIGTIGLVPCAIGGSHLREWVKGTDRYT 121

Query: 130 NLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPII 189
            LVER++ SE++GG V+G  WYQGESDAAVEEEA  YEREL+KFF DLRAD NHP+LPII
Sbjct: 122 KLVERMKRSEEHGGKVKGFFWYQGESDAAVEEEAKSYERELSKFFTDLRADMNHPDLPII 181

Query: 190 LVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNV 249
           LVK+VTHDFF+SP+  FKEEV NA EAVT +LPNV MVDG +AVGNFD+GLNED+GHLNV
Sbjct: 182 LVKIVTHDFFISPDFEFKEEVWNAQEAVTQKLPNVRMVDGRVAVGNFDEGLNEDRGHLNV 241

Query: 250 KSEVKLGKMFAHSFYSNFAH 270
           KSEV LGKMFAHS+YSNFAH
Sbjct: 242 KSEVNLGKMFAHSYYSNFAH 261

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BLAST of CsaV3_6G005360 vs. NCBI nr
Match: XP_022939276.1 (probable carbohydrate esterase At4g34215 [Cucurbita moschata])

HSP 1 Score: 437.6 bits (1124), Expect = 3.2e-119
Identity = 206/260 (79.23%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 10  ATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQA 69
           A TSP NIFILAGQSNMAGRGGVS DPTTDK VWDGYIP E + N SIFR  ADMVWEQA
Sbjct: 2   AATSPANIFILAGQSNMAGRGGVSKDPTTDKNVWDGYIPPESQPNQSIFRFTADMVWEQA 61

Query: 70  HEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYD 129
            EPLHWDIDVVKTNG+GPGM FANELLA  G  IG IGLVPCAIGGSHL+EWVKGTNRY 
Sbjct: 62  REPLHWDIDVVKTNGVGPGMPFANELLAKAGPSIGTIGLVPCAIGGSHLREWVKGTNRYT 121

Query: 130 NLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPII 189
            LVER++ SE++GG V+G  WYQGESDAAVEEEA  YEREL+KFF DLRAD NHP+LPII
Sbjct: 122 KLVERMKRSEEHGGKVKGFFWYQGESDAAVEEEAKSYERELSKFFTDLRADMNHPDLPII 181

Query: 190 LVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNV 249
           LVK+VTHDFF+SP+  FKEEV NA EAVT +LPN+ MVDG +AVGNFD+GLNED+GHLNV
Sbjct: 182 LVKIVTHDFFISPDFEFKEEVWNAQEAVTQKLPNIRMVDGRVAVGNFDEGLNEDRGHLNV 241

Query: 250 KSEVKLGKMFAHSFYSNFAH 270
           KSEV LGKMFAHS+YSNFAH
Sbjct: 242 KSEVNLGKMFAHSYYSNFAH 261

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BLAST of CsaV3_6G005360 vs. NCBI nr
Match: XP_022993914.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima])

HSP 1 Score: 435.3 bits (1118), Expect = 1.6e-118
Identity = 205/260 (78.85%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 10  ATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQA 69
           A TSP NIFILAGQSNMAGRGGVS DPTTDK VWDGYIP E + N SIFR  ADMVWEQA
Sbjct: 2   AATSPANIFILAGQSNMAGRGGVSKDPTTDKNVWDGYIPPESQPNQSIFRFTADMVWEQA 61

Query: 70  HEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYD 129
            EPLHWDIDVVKTNG+GPGM FANELLA  G  IG IGLVPCAIGGSHL+EWVKGT+RY 
Sbjct: 62  REPLHWDIDVVKTNGVGPGMPFANELLAKAGPSIGTIGLVPCAIGGSHLREWVKGTDRYT 121

Query: 130 NLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPII 189
            LVER++ SE++GG V+G  WYQGESDAAVEEEA  YEREL+KFF DLRAD NHP+LPII
Sbjct: 122 KLVERMKRSEEHGGKVKGFFWYQGESDAAVEEEAKSYERELSKFFTDLRADVNHPDLPII 181

Query: 190 LVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNV 249
           LVK+VTHDFF+SP+  FK+EV NA EAVT +LPNV MVDG +AVGNFD+GLNED+GHLNV
Sbjct: 182 LVKIVTHDFFISPDFEFKDEVWNAQEAVTQKLPNVRMVDGRVAVGNFDEGLNEDRGHLNV 241

Query: 250 KSEVKLGKMFAHSFYSNFAH 270
           KSEV LGKMFAHS+YSNFAH
Sbjct: 242 KSEVNLGKMFAHSYYSNFAH 261

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BLAST of CsaV3_6G005360 vs. TAIR10
Match: AT3G53010.1 (Domain of unknown function (DUF303) )

HSP 1 Score: 213.0 bits (541), Expect = 2.3e-55
Identity = 120/260 (46.15%), Postives = 151/260 (58.08%), Query Frame = 0


Query: 6   LSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMV 65
           L  +  T   +IFILAGQSNMAGRGGV  D  T+  VWDG IP EC SN SI RL + + 
Sbjct: 20  LQSQTITRNISIFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRLTSKLE 79

Query: 66  WEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGT 125
           W++A EPLH DID+ KTNG+GPGM FAN ++     R G +GLVPC+IGG+ L +W KG 
Sbjct: 80  WKEAKEPLHVDIDINKTNGVGPGMPFANRVV----NRFGQVGLVPCSIGGTKLSQWQKGE 139

Query: 126 NRYDNLVERIRA--SEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNH 185
             Y+  V+R +A  +   GG+ + +LWYQGESD     +A  Y++ L KFF DLR D  H
Sbjct: 140 FLYEETVKRAKAAMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRNDLQH 199

Query: 186 PELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNED 245
           P LPII V L T      P +    +       +   L NV  VD    +    DGL   
Sbjct: 200 PNLPIIQVALATG---AGPYLDAVRKA-----QLKTDLENVYCVDA-RGLPLEPDGL--- 259

Query: 246 KGHLNVKSEVKLGKMFAHSF 264
             HL   S+V+LG M A SF
Sbjct: 260 --HLTTSSQVQLGHMIAESF 261

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BLAST of CsaV3_6G005360 vs. TAIR10
Match: AT4G34215.1 (Domain of unknown function (DUF303) )

HSP 1 Score: 204.5 bits (519), Expect = 8.2e-53
Identity = 110/254 (43.31%), Postives = 148/254 (58.27%), Query Frame = 0


Query: 14  PNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQAHEPL 73
           PN IFIL+GQSNMAGRGGV  D   ++ VWD  +P EC  N SI RL+AD+ WE+AHEPL
Sbjct: 21  PNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPL 80

Query: 74  HWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYDNLVE 133
           H DID  K  G+GPGMAFAN +          IGLVPCA GG+ +KEW +G++ Y+ +V+
Sbjct: 81  HVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVK 140

Query: 134 RIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPIILVKL 193
           R   S K GG ++ +LWYQGESD     +A  Y   + +   +LR D N P LPII V +
Sbjct: 141 RTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAI 200

Query: 194 VTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNVKSEV 253
            +   ++       ++V  A   +  +L NV  VD           L  D  HL  +++V
Sbjct: 201 ASGGGYI-------DKVREAQLGL--KLSNVVCVDAKGL------PLKSDNLHLTTEAQV 259

Query: 254 KLGKMFAHSFYSNF 268
           +LG   A ++ SNF
Sbjct: 261 QLGLSLAQAYLSNF 259

[Close]

BLAST of CsaV3_6G005360 vs. Swiss-Prot
Match: sp|Q8L9J9|CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-51
Identity = 110/254 (43.31%), Postives = 148/254 (58.27%), Query Frame = 0


Query: 14  PNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVWEQAHEPL 73
           PN IFIL+GQSNMAGRGGV  D   ++ VWD  +P EC  N SI RL+AD+ WE+AHEPL
Sbjct: 21  PNQIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPL 80

Query: 74  HWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTNRYDNLVE 133
           H DID  K  G+GPGMAFAN +          IGLVPCA GG+ +KEW +G++ Y+ +V+
Sbjct: 81  HVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVK 140

Query: 134 RIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADTNHPELPIILVKL 193
           R   S K GG ++ +LWYQGESD     +A  Y   + +   +LR D N P LPII V +
Sbjct: 141 RTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAI 200

Query: 194 VTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGLNEDKGHLNVKSEV 253
            +   ++       ++V  A   +  +L NV  VD           L  D  HL  +++V
Sbjct: 201 ASGGGYI-------DKVREAQLGL--KLSNVVCVDAKGL------PLKSDNLHLTTEAQV 259

Query: 254 KLGKMFAHSFYSNF 268
           +LG   A ++ SNF
Sbjct: 261 QLGLSLAQAYLSNF 259

[Close]

BLAST of CsaV3_6G005360 vs. TrEMBL
Match: tr|A0A0A0K9J9|A0A0A0K9J9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058180 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 6.0e-159
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60
           MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL
Sbjct: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60

Query: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120
           NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE
Sbjct: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120

Query: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180
           WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD
Sbjct: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180

Query: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240
           TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL
Sbjct: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240

Query: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS 274
           NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS
Sbjct: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFLS 273

[Close]

BLAST of CsaV3_6G005360 vs. TrEMBL
Match: tr|A0A1S3B3Y0|A0A1S3B3Y0_CUCME (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103485730 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.3e-149
Identity = 255/272 (93.75%), Postives = 264/272 (97.06%), Query Frame = 0


Query: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRL 60
           MTDSILSPKATTSPNNIFILAGQSNMAGRGGVS DPTT+KMVWDGYIPLEC+SNDSIFRL
Sbjct: 1   MTDSILSPKATTSPNNIFILAGQSNMAGRGGVSQDPTTEKMVWDGYIPLECQSNDSIFRL 60

Query: 61  NADMVWEQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKE 120
           NADMVWE+AHEPLHWDIDVVKTNGIGPGM FANELLAIGGKR GAIGLVPCAIGGSHLKE
Sbjct: 61  NADMVWEKAHEPLHWDIDVVKTNGIGPGMPFANELLAIGGKRAGAIGLVPCAIGGSHLKE 120

Query: 121 WVKGTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180
           WVKGT+RYDNLVERIRASEK+GG V+G LWYQGESDAAVEEEAMCYERELTKFFIDLRAD
Sbjct: 121 WVKGTDRYDNLVERIRASEKDGGKVKGFLWYQGESDAAVEEEAMCYERELTKFFIDLRAD 180

Query: 181 TNHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNFDDGL 240
           TNHP+LPII+VK+VTHDFFLSPNISFKEEV  ALEAVTH LPNVTMVDGPMAVGNFDDGL
Sbjct: 181 TNHPDLPIIMVKIVTHDFFLSPNISFKEEVLKALEAVTHNLPNVTMVDGPMAVGNFDDGL 240

Query: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL 273
           NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL
Sbjct: 241 NEDKGHLNVKSEVKLGKMFAHSFYSNFAHNFL 272

[Close]

BLAST of CsaV3_6G005360 vs. TrEMBL
Match: tr|A0A1S4DVE0|A0A1S4DVE0_CUCME (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103487864 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.3e-64
Identity = 131/270 (48.52%), Postives = 172/270 (63.70%), Query Frame = 0


Query: 7   SPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVW 66
           S     SP NIFIL GQSNMAGRGGV  + ++ K  WDG IP +C+ N SI RLNA   W
Sbjct: 18  SLSGAVSPQNIFILGGQSNMAGRGGVEKN-SSGKFEWDGVIPPDCKPNPSILRLNAARQW 77

Query: 67  EQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVK--- 126
           E A EPLHWDIDV+K NGI PGM FA+ELL   G R G +GLVP AIGG+ +++W+K   
Sbjct: 78  EVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVPTAIGGTFIRQWLKNDS 137

Query: 127 --GTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADT 186
                 Y NLVERI+AS+K GG V+ +LW+QGESDAAV+EEA+ Y+  L  F +DLR D 
Sbjct: 138 YPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAINYKDNLKTFIMDLRRDI 197

Query: 187 NHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDG---PMAVGNFDD 246
               LP+I+VK+  +DF  +        V  A EAV+  +P+V+++D    PM +    +
Sbjct: 198 QPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKEVPDVSIIDSWKLPMNL-KTRE 257

Query: 247 GLNEDKGHLNVKSEVKLGKMFAHSFYSNFA 269
           G N D+GH N   E+  GK  A ++ S ++
Sbjct: 258 GFNLDRGHFNTTIELTAGKWLADAYLSRYS 285

[Close]

BLAST of CsaV3_6G005360 vs. TrEMBL
Match: tr|E5GB85|E5GB85_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.3e-64
Identity = 131/270 (48.52%), Postives = 172/270 (63.70%), Query Frame = 0


Query: 7   SPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVW 66
           S     SP NIFIL GQSNMAGRGGV  + ++ K  WDG IP +C+ N SI RLNA   W
Sbjct: 21  SLSGAVSPQNIFILGGQSNMAGRGGVEKN-SSGKFEWDGVIPPDCKPNPSILRLNAARQW 80

Query: 67  EQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVK--- 126
           E A EPLHWDIDV+K NGI PGM FA+ELL   G R G +GLVP AIGG+ +++W+K   
Sbjct: 81  EVAREPLHWDIDVMKANGISPGMGFAHELLVKAGPRAGVVGLVPTAIGGTFIRQWLKNDS 140

Query: 127 --GTNRYDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADT 186
                 Y NLVERI+AS+K GG V+ +LW+QGESDAAV+EEA+ Y+  L  F +DLR D 
Sbjct: 141 YPNATYYQNLVERIQASDKEGGVVRALLWFQGESDAAVKEEAINYKDNLKTFIMDLRRDI 200

Query: 187 NHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDG---PMAVGNFDD 246
               LP+I+VK+  +DF  +        V  A EAV+  +P+V+++D    PM +    +
Sbjct: 201 QPRFLPVIIVKIALYDFLRANATDNLSIVRAAQEAVSKEVPDVSIIDSWKLPMNL-KTRE 260

Query: 247 GLNEDKGHLNVKSEVKLGKMFAHSFYSNFA 269
           G N D+GH N   E+  GK  A ++ S ++
Sbjct: 261 GFNLDRGHFNTTIELTAGKWLADAYLSRYS 288

[Close]

BLAST of CsaV3_6G005360 vs. TrEMBL
Match: tr|A0A0A0LNC5|A0A0A0LNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356040 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 125/268 (46.64%), Postives = 169/268 (63.06%), Query Frame = 0


Query: 7   SPKATTSPNNIFILAGQSNMAGRGGVSLDPTTDKMVWDGYIPLECESNDSIFRLNADMVW 66
           S     SP NIFILAGQSNMAGRGGV  +     + WDG +P EC+   SI RLN  + W
Sbjct: 18  SLSGAASPKNIFILAGQSNMAGRGGVE-NNAQGNLQWDGLVPPECQPQPSILRLNPGLQW 77

Query: 67  EQAHEPLHWDIDVVKTNGIGPGMAFANELLAIGGKRIGAIGLVPCAIGGSHLKEWVKGTN 126
           E A EPLH  ID+ +T GIGPG+AFA+ELL   G   GA+GLVPCA GG+ +++W+K  +
Sbjct: 78  EIAREPLHLGIDIKRTPGIGPGIAFAHELLVKAGPNAGAVGLVPCARGGTLIEQWIKNPS 137

Query: 127 R-----YDNLVERIRASEKNGGTVQGILWYQGESDAAVEEEAMCYERELTKFFIDLRADT 186
                 Y N +ERI+AS+K+GG V+ + W+QGESDAA+ + A+ Y+  L KFF D+R D 
Sbjct: 138 NPSATFYQNFIERIKASDKDGGVVRALFWFQGESDAAMNDTAIRYKDNLKKFFTDIRDDI 197

Query: 187 NHPELPIILVKLVTHDFFLSPNISFKEEVCNALEAVTHRLPNVTMVDGPMAVGNF--DDG 246
               LPII+VK+  +DFF   +      V  A EAV+  LP+V  +D      N+  ++G
Sbjct: 198 KPRFLPIIVVKIALYDFFRQHDTHNLPAVREAKEAVSKELPDVVAIDSLKLPINYTTNEG 257

Query: 247 LNEDKGHLNVKSEVKLGKMFAHSFYSNF 268
           +N D GH N  +E+ LGK  A ++ S+F
Sbjct: 258 INLDHGHFNTTTEITLGKWLAETYLSHF 284

The following BLAST results are available for this feature:

BLAST of CsaV3_6G005360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141016.1	9.1e-159	100.00	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus] >KGN46153....	[more]
XP_008441649.2	5.0e-149	93.75	PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]	[more]
XP_023550941.1	1.1e-119	79.62	probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]	[more]
XP_022939276.1	3.2e-119	79.23	probable carbohydrate esterase At4g34215 [Cucurbita moschata]	[more]
XP_022993914.1	1.6e-118	78.85	probable carbohydrate esterase At4g34215 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G005360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G53010.1	2.3e-55	46.15	Domain of unknown function (DUF303)	[more]
AT4G34215.1	8.2e-53	43.31	Domain of unknown function (DUF303)	[more]

BLAST of CsaV3_6G005360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L9J9\|CAES_ARATH	1.5e-51	43.31	Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]

BLAST of CsaV3_6G005360 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9J9\|A0A0A0K9J9_CUCSA	6.0e-159	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058180 PE=4 SV=1	[more]
tr\|A0A1S3B3Y0\|A0A1S3B3Y0_CUCME	3.3e-149	93.75	probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103485730...	[more]
tr\|A0A1S4DVE0\|A0A1S4DVE0_CUCME	7.3e-64	48.52	probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103487864...	[more]
tr\|E5GB85\|E5GB85_CUCME	7.3e-64	48.52	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0LNC5\|A0A0A0LNC5_CUCSA	3.1e-62	46.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356040 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036514	SGNH_hydro_sf
IPR005181	SASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G005360.1	CsaV3_6G005360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005181	Sialate O-acetylesterase domain	PFAM	PF03629	SASA	coord: 15..264 e-value: 4.1E-74 score: 248.9
IPR036514	SGNH hydrolase superfamily	GENE3D	G3DSA:3.40.50.1110		coord: 13..268 e-value: 2.7E-75 score: 255.0
None	No IPR available	PANTHER	PTHR31988	FAMILY NOT NAMED	coord: 9..268
None	No IPR available	SUPERFAMILY	SSF52266	SGNH hydrolase	coord: 16..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G005360	CSPI06G05010	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G005360	Cucsa.363600	Cucumber (Gy14) v1	cgycucB556
CsaV3_6G005360	CmoCh15G006100	Cucurbita moschata (Rifu)	cmocucB0359
CsaV3_6G005360	Cp4.1LG13g03940	Cucurbita pepo (Zucchini)	cpecucB0237
CsaV3_6G005360	CsGy6G004940	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G005360	Cla013828	Watermelon (97103) v1	cucwmB496
CsaV3_6G005360	ClCG08G006890	Watermelon (Charleston Gray)	cucwcgB529
CsaV3_6G005360	Lsi08G005460	Bottle gourd (USVL1VR-Ls)	cuclsiB509

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G005360	Cucumber (Chinese Long) v3	cuccucB050
CsaV3_6G005360	Silver-seed gourd	carcucB0072
CsaV3_6G005360	Silver-seed gourd	carcucB0874
CsaV3_6G005360	Cucurbita maxima (Rimu)	cmacucB0362
CsaV3_6G005360	Cucurbita maxima (Rimu)	cmacucB0907
CsaV3_6G005360	Cucurbita moschata (Rifu)	cmocucB0898
CsaV3_6G005360	Cucurbita pepo (Zucchini)	cpecucB0568
CsaV3_6G005360	Melon (DHL92) v3.5.1	cucmeB480
CsaV3_6G005360	Melon (DHL92) v3.6.1	cucmedB469
CsaV3_6G005360	Watermelon (97103) v2	cucwmbB519
CsaV3_6G005360	Wax gourd	cucwgoB593