CsaV3_3G044430 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACTTTAATACCCATTTTTATTATTTAATTGATTTATAACAAATATTTAAAAGAAAAAATCGTAGGATACGACTCTGTAAAGAAGTGAAAAACCATTTAATGCTTTTCTTCTAAGAAAACGGTCTCATCTTCCCTTTCCAACGTGGATTACAACTTTTACAGAAAATTTTAGAGAGTTGAGAGGTGAAGAAGAAGACACGTTACTTGCCTTGTTTGGGACCCGCCTTGTTCCGTGTGGGTCCGAAATGAACATCTCTTCCTCATAGTATGAATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGAGAACTCAGTTGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGCAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGATTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTCTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAAGTTTTTCCTCTCTAATCAAAATGTGCAACCATTAATATGGTTCTCCATGAATGTATATCGACTGACAAGATGCAAGAAGGAGGAAAAATGCTGCTGAAGTTGCACAAGTGGGCCTCTATTGAATTTTCCATGTAAAGCTTTGATTCTCATTTGTCAAAGAGACACATAACTAGATGATCCTTCCCTTCCAAGAAAAAGTGGAAAGTTCACAAACCTTCAGTCATTTCAACTGTAGTGTACTGAGTACTCATCTTAATTTGGCATGAGTTCTAGTTCGTGCTACTTCAATAGAATTATTGATTATTGAACTCATTCCATTCCCTTCAAACAGCATCTTGGCATCCAAAGTTGAAGGAACCAAATGGAGCCTTCATTAGTTATATGTTATCCTTTTCACAATCCCTCAAGTGACCAAATTCTCATCCACGGCCTTGCTCTCAGCCAGACACACAGTTTCAAATATCCAGTATGGACTCACCGTTCACTTACTAGCCTTCTTATAGTATGACCTTACACACCAAATGTTTCTAATCTTGATGCAGTTATTAAAGGGTATTAGTTATTGCTTAGTTAACTACAAAATTACCCGTGTTAATACGCTACTACTTGTTATGATTTATGATTATTCAAGTGAAATGTATATAAATGCAAAGTTGTACTGATCTATTTCTCTCAATTGATGTTGAGCAATCAGCAGGTAGTCATCAGCCTCCAAAAGGTTGGGCTGATGGCTGATGTTGATTTGTTCCATTCAACAACTAGGAGGAAGGTGACTTTTGCTTTCATTTTCTTGAGATTCTGTTTGCTTCATTTCTTCTATGTTTTTATGAGAAGGACCAAGGAATGTTTCAGATTTGAAGACAAGAATCAAAATGTCCCCAAGTCCTGTAAATAGAAGAGTTCTCTTGATTTGTGGGTGAAAATTTTCTACTCCGAAAGGTCTATAGAAAACTCTCTCGATAGCTAGAAGGCTTCTTTAACTTCTAAGCCGACCACCCTTGAAGATTGAAGCTCCTTTGAAGATATCGTCTTTCTTTCAAGACTTCAACTTAAAAACATCTCATGCTTCACTTCTTCAAATCAAACATAAGCATCCAATCGAGAGAGAACTAGAAGATCAAATTTGAGAGAGAACTAGAAAATCAAATCCTAGAGATCGAACCACATCGCATCAAATCAACGTAAATATAATATCAACATAAGTTCAACTTCTCGAATTAAATTTTTGCAGAAATCTCGTGCGAACTATTATAGTTATATTAAAAAATTCTAGTTCTTAGATCATGGTCGGTATGTATTTCTCCTAAATTGATTTTTGCACAAAGATCTATCAAAATATGTCTTTTTTTGTTTAAGATGGTAACTTTATAGTCTCTATTGTTGTTTTTCTTTTAAAACATCTCTATAACTATTATGTTTT ATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGAGAACTCAGTTGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGCAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGATTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTCTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAA ATGCCCGTCGACGACAAAGCGCCGCTGAGAAGGATGATTCATTTTTCATTTCCAATACGATTCGGGAACCCTAAAAACCTGCTTAATCCCCAGCCAAATCGTCATCAATCCAAGCTTTTCCATAACCTACCAATGGCGGATGTTCTTCCCAGTTCCAGAAGACCCGTTTGTCCATCCTGCTCGAAACCGGCCCGTATCTGTCTCTGTTCGCGGTTTCGTAGTTCCAGTGTCGAGAACTCAGTTGGGGTAATCATTCTTCAGCACAGTTTAGAGAAAAACCATCCGCTTAATTCTGCTAGAATCGTAAAATTAGGTCTCAAGAATGTGGAGATCGCCACCGTTTCCGACGTTAACTTCGAGGCTCGCTTTACTATTCGGCTGCCTGAACCTAATTCCGCAGCACAAAATCTTGATCCTGATATAGAATGTAGTTTCAGAAATGGTCATGGTACGATTCAAAAGCCACAAATTCAGGATGGGTCTATTGTCGATAAACTTAACTGCACAAAAACTAACGAAGGAGCTGCAATTTCTGTTACGATTGGGAAACATGGCGTCGTTAACTCATTCGATCACATCTGGATGCAACTACCGGGTTTTCAGGAGCTTAAAATCAATGAGTTCTTGGCATCTCCAGAAATTAGGGCATCATTAGCAAAAGGGTTCATCGTCAAGAAAATGCAGAAGCGGCAGCTAGTTGAAAGCAAGGGGCTAGAAGAATATGCTGAGTTCGAGATTCAGGTTCCTCCCAAGTCAGTTCTACTTTTTCCCTCTGAAAATGCATTTACTGTAAGTGGTGGTGTTGATGGTAGTGATTTTTATATTAATAATTTGATAGTTTTAGATGGAACATGGGCAAAAGCAAAGAGAATGTACAATGAAAATCCTTGGTTGAGGCTTTTGCCACATATGAAGTTGGACTTAGAGATCATGAGCTTGTATAGTGAAGTGAGACATCAGCCTAAGATTGGTTTTTTGTCCACCATTGAAAGCATTGTCTATGCCTTGAAGCTAATAGGAGATCACCCTGAGGGGCTGGATGATTTGTTGGATGTTTTTGAGTCTATGATAGGAGATCAAAGGAGATGTAAAGATGAGAGGCTCAAAATTACTAGTCAATTTTAA MPVDDKAPLRRMIHFSFPIRFGNPKNLLNPQPNRHQSKLFHNLPMADVLPSSRRPVCPSCSKPARICLCSRFRSSSVENSVGVIILQHSLEKNHPLNSARIVKLGLKNVEIATVSDVNFEARFTIRLPEPNSAAQNLDPDIECSFRNGHGTIQKPQIQDGSIVDKLNCTKTNEGAAISVTIGKHGVVNSFDHIWMQLPGFQELKINEFLASPEIRASLAKGFIVKKMQKRQLVESKGLEEYAEFEIQVPPKSVLLFPSENAFTVSGGVDGSDFYINNLIVLDGTWAKAKRMYNENPWLRLLPHMKLDLEIMSLYSEVRHQPKIGFLSTIESIVYALKLIGDHPEGLDDLLDVFESMIGDQRRCKDERLKITSQF
BLAST of CsaV3_3G044430 vs. NCBI nr
Match: KGN59885.1 (hypothetical protein Csa_3G851850 [Cucumis sativus]) HSP 1 Score: 759.2 bits (1959), Expect = 6.5e-216 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. NCBI nr
Match: XP_004150112.2 (PREDICTED: uncharacterized protein LOC101217537 [Cucumis sativus]) HSP 1 Score: 736.1 bits (1899), Expect = 5.9e-209 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. NCBI nr
Match: XP_008454653.1 (PREDICTED: uncharacterized protein LOC103495005 isoform X1 [Cucumis melo]) HSP 1 Score: 664.1 bits (1712), Expect = 2.9e-187 Identity = 329/362 (90.88%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. NCBI nr
Match: XP_022976533.1 (uncharacterized protein LOC111476900 isoform X1 [Cucurbita maxima]) HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152 Identity = 286/368 (77.72%), Postives = 309/368 (83.97%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. NCBI nr
Match: XP_023535710.1 (uncharacterized protein LOC111797060 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.9 bits (1400), Expect = 4.3e-151 Identity = 284/368 (77.17%), Postives = 308/368 (83.70%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TAIR10
Match: AT5G54880.1 (DTW domain-containing protein) HSP 1 Score: 262.3 bits (669), Expect = 4.5e-70 Identity = 152/359 (42.34%), Postives = 209/359 (58.22%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TAIR10
Match: AT2G41750.1 (DTW domain-containing protein) HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04 Identity = 20/57 (35.09%), Postives = 30/57 (52.63%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. Swiss-Prot
Match: sp|Q9D0U1|DTWD2_MOUSE (DTW domain-containing protein 2 OS=Mus musculus OX=10090 GN=Dtwd2 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.9e-05 Identity = 27/88 (30.68%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. Swiss-Prot
Match: sp|Q8NBA8|DTWD2_HUMAN (DTW domain-containing protein 2 OS=Homo sapiens OX=9606 GN=DTWD2 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 8.3e-05 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
HSP 2 Score: 42.4 bits (98), Expect = 1.3e-02 Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. Swiss-Prot
Match: sp|Q4R7M4|DTWD2_MACFA (DTW domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=DTWD2 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 8.3e-05 Identity = 27/88 (30.68%), Postives = 48/88 (54.55%), Query Frame = 0
HSP 2 Score: 42.4 bits (98), Expect = 1.3e-02 Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TrEMBL
Match: tr|A0A0A0LD09|A0A0A0LD09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851850 PE=4 SV=1) HSP 1 Score: 759.2 bits (1959), Expect = 4.3e-216 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TrEMBL
Match: tr|A0A1S3BZW7|A0A1S3BZW7_CUCME (uncharacterized protein LOC103495005 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495005 PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 1.9e-187 Identity = 329/362 (90.88%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TrEMBL
Match: tr|A0A1S3C0C5|A0A1S3C0C5_CUCME (uncharacterized protein LOC103495005 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495005 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 3.6e-114 Identity = 210/239 (87.87%), Postives = 219/239 (91.63%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TrEMBL
Match: tr|A0A151U292|A0A151U292_CAJCA (DTW domain-containing protein 2 OS=Cajanus cajan OX=3821 GN=KK1_006015 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94 Identity = 180/331 (54.38%), Postives = 235/331 (71.00%), Query Frame = 0
BLAST of CsaV3_3G044430 vs. TrEMBL
Match: tr|A0A1S2Z8P6|A0A1S2Z8P6_CICAR (uncharacterized protein LOC101509516 OS=Cicer arietinum OX=3827 GN=LOC101509516 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90 Identity = 182/349 (52.15%), Postives = 232/349 (66.48%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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