CsaV3_1G039400 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTATGCAGTTTTACGTTACCGTCCGTGTTTTCGAGCGGCCGGAATCTGGAACTGTTCAACGGAGGTTGGTCTCCGGCGGCGGCAAGTGCTAGAGCAAGTTGATAAAGAGTTAGCCAAAGGTGATGATCGAGCGGCTCTCTTCCTCCTCAAGGAATCGCAGGGGAAGCTCGACGGCGTTCGATGCTTCGGCGCAGCTCGTCAGGTCAGTAATTGCAAAGATTTTGATCGGAATTGTTAGCAGTTTCATTCTTGTTGTTTTGATTCCTTTCAATCTATTTGTTGAAATGCTTCAACGAGTTGTAGTTTCAAAAATGGGAAGAAACAAAGCATAATCTTACAGGGAACCTTAAGCTGTTAACACTTTCATTTGCATGATTAATTATGATATTGAAGGAGAGAAGTTATTATGCAGATTCCTCAAAGACTTTATACATTGGAAGAGCTGAAGCTAAATGGAATTGAAACTTCATCTCTTTTATCACCATTGGATTCAACTCTTGGTTCAATTGAAAGATATATTCAACTTGCTGCTGGTTTGCTTGCTGTTTCTGCTTGGAATCTCTTTGAATTTACTCCCCAACAAATCTTCTACATTTCTCTTGGATTCCTATTTCTTTGGACCCTCGATTCGGTAAGTATTGTATGATTGTTCCTGTACTATGTTTTGAGTTTAGTTATATAATTATTAGGGACAGTAAACCTCCACATATCTCTACAACAAATGGTATGTGCATAATAAGCCTTTGTGACATTGCTTTTGTGATCATCTGAATGCCTCATTTGAGATATCATCACTCACTTGTGTATCAATGATTTTTCCTTTTTTCTCTTACAACTGTGAGTCAAACCTTTGCTCCCTTATCATCACTCCAAGGTTTTTACTCTCTGTCGTTGCAAAAAAACGTTGGGAGATACTGAAACGTGCATCATAAGAAACTCTAAACGTTCATGTCATAAAGGCAGATATGTCCACACATAGTGAGTGCATTGGGAGAGAAATGAGATCTTCTTTTTTGTTGCGTTGACACAGCCTAAAGTTCTTGCAGTGTATAACTAGGGCATCTGCACTAGCTTAAGGCTCGAACTCAAGAGGCATCATGAGTTTTGGTATACTCACTAGAAGGCTTAAATTTGAAGGCCTAGCCAATGGAGTTGCACTTGAGTGTCATTCTTTTTATCTAACTAATGAGACTTTAGGCCGTCTCTTTGATACCTTAGTTATTGAGTATGATGCTCTAATAAGTTACAAAGTTTTGATCTTTTTCTTTTATGCCTTAAGGTGGCTTTGAATGGGGGAGTTGGAAGTTTGGTTCTTGATACAATTGGTCATACTTTTAGTAAGAAGTACCACAACAGAGTTATTCAAGTAAAATTCTCTCTCAACCTATTGCTGCATTTTATGACCACTTCTTCATATATTTGAAGATAACATGATCTACTAGTCAATGAAAATTAATAGCATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTCGGAGTTCTTCCAAAAGGCTACACTACGTCAAGTTTTGAAGCGTTTCAAAAGGAAGGGTCTCTCAATCTTCAGGCTGGCACTGCTTTTGTTGATTTTGAATTTCTTGAAGAAGTAAGTTTAATTTGATAGTTAACGAATCGTAGTTGAAGTTTGAGATCGTTGTCTTTTGGTTAATAATTTACCTTCCCTGTTCCCACAGGTTAATGCAGGAAAAGTCTCGGCAACAGTTCGTTTTCTACTTAAAACCTTCCTGCTTTTCTCTTTTGTGTTTTTAAATTTTATGGAACACTTGAATTTATATTGAAAGATAGAAATCCACGACCCCTACCAACCATTAGTTGATTAGATACTGAAAACCCCTCAACTGCAAGAACTAAATTACAATGTTTTGATAGTTAAGTACCAAAATGAGATTTGTTTTCCTTATGGAGATTATCTTTGGTATTGTTTGTTTGTTTATCAGATGTTGAACAGATTTTCATGCATAGCACTTGCTGGTGTGGCTACTGAGTATCTTCTATATGGATGTGCTGAGGGAGGTCTTGCTGATATCAACAAGGTTTGTTTTCTATCATTTATTGGTTGGATTTTAATGGCTTTTATTAGTCGATAGGTTTCCCTTGGACTCGAAATTGAACCATATTGATGTCATATAACACAAAAAGGTAGATTTAGAAAGAAACGTTCGATAACGTTATTGTTTCTTATTTCATGATTTCTTTTTTATTAGAAAAAAAACCTTTCATACTTAGTCTCGGTCAACAAAATGATCGCTCGAAAAACTGAACCGAACCAAACTAAACCGAACGTTTTGGTTTGCCATTGATTTATTGGATGCAGTTGGATGTGTTGTTGAAAGGGTTAGGGTTTACACAAAAGAAGGCAGATTCTCAAGTAAGATGGGCAGTTTTAAACACTATTTTGATACTGCGACGCCATGAAAGTGCAAGAGCTAAGCTTGCTGATGCTATGTCTTCCGGAAAATCGGTAGGAAATTGTATTGACGTTGTAGAGAACAGTATTCATCTTCCTGACCTTTAA ATGCAGTATGCAGTTTTACGTTACCGTCCGTGTTTTCGAGCGGCCGGAATCTGGAACTGTTCAACGGAGGTTGGTCTCCGGCGGCGGCAAGTGCTAGAGCAAGTTGATAAAGAGTTAGCCAAAGGTGATGATCGAGCGGCTCTCTTCCTCCTCAAGGAATCGCAGGGGAAGCTCGACGGCGTTCGATGCTTCGGCGCAGCTCGTCAGATTCCTCAAAGACTTTATACATTGGAAGAGCTGAAGCTAAATGGAATTGAAACTTCATCTCTTTTATCACCATTGGATTCAACTCTTGGTTCAATTGAAAGATATATTCAACTTGCTGCTGGTTTGCTTGCTGTTTCTGCTTGGAATCTCTTTGAATTTACTCCCCAACAAATCTTCTACATTTCTCTTGGATTCCTATTTCTTTGGACCCTCGATTCGGTGGCTTTGAATGGGGGAGTTGGAAGTTTGGTTCTTGATACAATTGGTCATACTTTTAGTAAGAAGTACCACAACAGAGTTATTCAACATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTCGGAGTTCTTCCAAAAGGCTACACTACGTCAAGTTTTGAAGCGTTTCAAAAGGAAGGGTCTCTCAATCTTCAGGCTGGCACTGCTTTTGTTGATTTTGAATTTCTTGAAGAAGTTAATGCAGGAAAAGTCTCGGCAACAATGTTGAACAGATTTTCATGCATAGCACTTGCTGGTGTGGCTACTGAGTATCTTCTATATGGATGTGCTGAGGGAGGTCTTGCTGATATCAACAAGTTGGATGTGTTGTTGAAAGGGTTAGGGTTTACACAAAAGAAGGCAGATTCTCAAGTAAGATGGGCAGTTTTAAACACTATTTTGATACTGCGACGCCATGAAAGTGCAAGAGCTAAGCTTGCTGATGCTATGTCTTCCGGAAAATCGGTAGGAAATTGTATTGACGTTGTAGAGAACAGTATTCATCTTCCTGACCTTTAA ATGCAGTATGCAGTTTTACGTTACCGTCCGTGTTTTCGAGCGGCCGGAATCTGGAACTGTTCAACGGAGGTTGGTCTCCGGCGGCGGCAAGTGCTAGAGCAAGTTGATAAAGAGTTAGCCAAAGGTGATGATCGAGCGGCTCTCTTCCTCCTCAAGGAATCGCAGGGGAAGCTCGACGGCGTTCGATGCTTCGGCGCAGCTCGTCAGATTCCTCAAAGACTTTATACATTGGAAGAGCTGAAGCTAAATGGAATTGAAACTTCATCTCTTTTATCACCATTGGATTCAACTCTTGGTTCAATTGAAAGATATATTCAACTTGCTGCTGGTTTGCTTGCTGTTTCTGCTTGGAATCTCTTTGAATTTACTCCCCAACAAATCTTCTACATTTCTCTTGGATTCCTATTTCTTTGGACCCTCGATTCGGTGGCTTTGAATGGGGGAGTTGGAAGTTTGGTTCTTGATACAATTGGTCATACTTTTAGTAAGAAGTACCACAACAGAGTTATTCAACATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTCGGAGTTCTTCCAAAAGGCTACACTACGTCAAGTTTTGAAGCGTTTCAAAAGGAAGGGTCTCTCAATCTTCAGGCTGGCACTGCTTTTGTTGATTTTGAATTTCTTGAAGAAGTTAATGCAGGAAAAGTCTCGGCAACAATGTTGAACAGATTTTCATGCATAGCACTTGCTGGTGTGGCTACTGAGTATCTTCTATATGGATGTGCTGAGGGAGGTCTTGCTGATATCAACAAGTTGGATGTGTTGTTGAAAGGGTTAGGGTTTACACAAAAGAAGGCAGATTCTCAAGTAAGATGGGCAGTTTTAAACACTATTTTGATACTGCGACGCCATGAAAGTGCAAGAGCTAAGCTTGCTGATGCTATGTCTTCCGGAAAATCGGTAGGAAATTGTATTGACGTTGTAGAGAACAGTATTCATCTTCCTGACCTTTAA MQYAVLRYRPCFRAAGIWNCSTEVGLRRRQVLEQVDKELAKGDDRAALFLLKESQGKLDGVRCFGAARQIPQRLYTLEELKLNGIETSSLLSPLDSTLGSIERYIQLAAGLLAVSAWNLFEFTPQQIFYISLGFLFLWTLDSVALNGGVGSLVLDTIGHTFSKKYHNRVIQHEAGHFLIAYLLGVLPKGYTTSSFEAFQKEGSLNLQAGTAFVDFEFLEEVNAGKVSATMLNRFSCIALAGVATEYLLYGCAEGGLADINKLDVLLKGLGFTQKKADSQVRWAVLNTILILRRHESARAKLADAMSSGKSVGNCIDVVENSIHLPDL
BLAST of CsaV3_1G039400 vs. NCBI nr
Match: XP_004135643.1 (PREDICTED: uncharacterized protein LOC101213973 [Cucumis sativus] >KGN66128.1 hypothetical protein Csa_1G572980 [Cucumis sativus]) HSP 1 Score: 647.5 bits (1669), Expect = 2.4e-182 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. NCBI nr
Match: XP_008450721.1 (PREDICTED: uncharacterized protein LOC103492217 isoform X1 [Cucumis melo]) HSP 1 Score: 642.5 bits (1656), Expect = 7.8e-181 Identity = 321/327 (98.17%), Postives = 326/327 (99.69%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. NCBI nr
Match: XP_008450722.1 (PREDICTED: uncharacterized protein LOC103492217 isoform X2 [Cucumis melo]) HSP 1 Score: 639.4 bits (1648), Expect = 6.6e-180 Identity = 319/326 (97.85%), Postives = 325/326 (99.69%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. NCBI nr
Match: XP_022154618.1 (uncharacterized protein LOC111021839 [Momordica charantia]) HSP 1 Score: 554.3 bits (1427), Expect = 2.8e-154 Identity = 281/330 (85.15%), Postives = 303/330 (91.82%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. NCBI nr
Match: XP_023530264.1 (uncharacterized protein LOC111792881 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 552.7 bits (1423), Expect = 8.1e-154 Identity = 277/327 (84.71%), Postives = 298/327 (91.13%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TAIR10
Match: AT5G27290.1 (unknown protein) HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-130 Identity = 226/309 (73.14%), Postives = 270/309 (87.38%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TAIR10
Match: AT1G54680.1 (unknown protein) HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33 Identity = 69/169 (40.83%), Postives = 107/169 (63.31%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TAIR10
Match: AT1G56180.1 (unknown protein) HSP 1 Score: 89.4 bits (220), Expect = 4.6e-18 Identity = 70/221 (31.67%), Postives = 109/221 (49.32%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TAIR10
Match: AT2G21960.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14 Identity = 73/263 (27.76%), Postives = 119/263 (45.25%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TrEMBL
Match: tr|A0A0A0LWJ4|A0A0A0LWJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G572980 PE=4 SV=1) HSP 1 Score: 647.5 bits (1669), Expect = 1.6e-182 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TrEMBL
Match: tr|A0A1S3BQI6|A0A1S3BQI6_CUCME (uncharacterized protein LOC103492217 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492217 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 5.2e-181 Identity = 321/327 (98.17%), Postives = 326/327 (99.69%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TrEMBL
Match: tr|A0A1S3BQW3|A0A1S3BQW3_CUCME (uncharacterized protein LOC103492217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492217 PE=4 SV=1) HSP 1 Score: 639.4 bits (1648), Expect = 4.4e-180 Identity = 319/326 (97.85%), Postives = 325/326 (99.69%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TrEMBL
Match: tr|A0A067JVL8|A0A067JVL8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23407 PE=4 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 2.3e-136 Identity = 246/311 (79.10%), Postives = 277/311 (89.07%), Query Frame = 0
BLAST of CsaV3_1G039400 vs. TrEMBL
Match: tr|A0A061F1R2|A0A061F1R2_THECC (A_TM021B04.11 protein OS=Theobroma cacao OX=3641 GN=TCM_026494 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 5.0e-136 Identity = 246/316 (77.85%), Postives = 284/316 (89.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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