CsaV3_1G038900 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G038900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat
Locationchr1 : 24503375 .. 24505373 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTTATCCATTTAGTATAACTCTTTCTACCTCTTCTTTGAAGAAAATTTGTGAAGCTATTCTCTGGCCAAAAATGGCTTCACTTCTTCCCCTTCATCCCATTCCATCTCTTCCCAACTCTACTAAATTTAACCCATCACCCATTTTCCACTCCCTCAGCTCATGTTCATCAATGTCTGAACTTAAGCAATTTCACTCCCAAATCATCCGTCTCGGCCTCTCTACAGACAACAATGCAATTGGCCGTCTCATCAAATTCTGTGCTGTTTCCAAGTATGGAGATCTTCACTATGCTCTTCTTTTATTCAATTCAATCCCTTACCCAGATGCTTTTATCTACAATACTTTAATTAGAGCTTACTTACACTTCAATTCCCCTAAATCTTCTTTACTTTTGTATTTGCAAATGCTTCATAACTCTGTCTTTCCCAATAAATTCACATTCCCTTCTGTAATTCGTGCTTGTTGTATTGATAATTCTGTTGAAGAAGGGAAACAAATTCATACCCATGTTGTTAAATTTGGTTTTTCAAAAGATAGATTTTGTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGACGCTAGAAGGGTGTTTGATTGTATTGAGTTACCTGATGTTGTAGCTTGGACTACTTTGCTTACTGGGTATGCTCAATTGGGTTATGTGGATGAAAGTTTACGAGTTTTCGAGTCGATGCCTGAACGTAACTCTGCTTCTTGGAATGCTATGATTTCTTGTTTTGTTCAAAACAATAGGTTTCATGAAGCGTTTGGTTTGTTTAATAGGATGAGAATAGAGAAAGTTGTTTTGGAGAAATATGTGGCTGCTAGTATGTTATCAGCTTGTACAGGATTAGGAGCACTTGAGCAAGGGAAATGGATACATAGATATATTGAGAGAAATGGGATTGAATTTGATTCAAAACTTGCAACTACATTGATTGATATGTATTGTAAATGTGGTTGTTTGGATTGTGCTTATGAAGTGTTTGTTCATTTGCCTGAAAAAGGGATTTCTTCATGGAATTGTATGATTGGAGGGATGGCTATGCATGGGAAAGGAGAGGCTGCTATAGAACTTTTTAAAGATATGGAAACCAAAATGGTGAAACCAGACAACATAACTTTCCTTAATGTACTTAGTGCTTGTGCTCACTCTGGTTTAGTCGAAAAGGGTCAACACTATTTCTATCGTTTTACTCAAGTTTATGGTATTGAACCCAGAACCGAGCATTATGGATGCATGGTTGATTTATACGGGCGAGCCGGGTTGCTAGAGGAAGCAATGAAGGTCATAGATGAGATGCCCATGAGTCCTGACGTAGGTGTGTTAGGTGCATTTGTTGGAGCTTGTAAGATACATGGGAACATAGAGTTGGGAGAGGAAGTAGGGAAGAGAGTAATAGAACTAGAGCCTACGAATAGCGGGCGATACGTACTACTGGGAAATCTATACGCCGAGGCAGGGAGATGGGAAGGTGTTGCAGAAGTAAGAAAGTTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGAGTTTCCATGATTGAATTGGAAGGTGTGGTGTATGAATTTATAGCAGGTGGAAGGAATCATCCTGAAGCAAAGGAAATATATGATAAACTTAATGAGATGTTAGAATGTATAAGAAGTGAAGGATATGTAGCAGAGAATGAAATTGAGGAAGAGAAGGATAATCCTGTTTATTACCATAGTGAGAAACTGGCAATTGCTTTTGGGTTGCTTAAAACTAAAGCAGGGGAAATTCTTAGAATCACTAAGAATTTGAGGGTTTGTAAGGACTGTCACCAAGCTTTGAAGCTTGTTTCAAAGGTTTTTCAACGAAAAATCATTGTAAGAGATAGAAATCGTTTCCATCATTTTGGTAATGGAGAGTGTTCTTGTAATGATTATTGGTAAACAAAATATCAACTCAGCTTTCCTAATGCTTCTTGTGATCATTGTTTTGCCCATAAAATTCAGTTT

mRNA sequence

ATGGCTTCACTTCTTCCCCTTCATCCCATTCCATCTCTTCCCAACTCTACTAAATTTAACCCATCACCCATTTTCCACTCCCTCAGCTCATGTTCATCAATGTCTGAACTTAAGCAATTTCACTCCCAAATCATCCGTCTCGGCCTCTCTACAGACAACAATGCAATTGGCCGTCTCATCAAATTCTGTGCTGTTTCCAAGTATGGAGATCTTCACTATGCTCTTCTTTTATTCAATTCAATCCCTTACCCAGATGCTTTTATCTACAATACTTTAATTAGAGCTTACTTACACTTCAATTCCCCTAAATCTTCTTTACTTTTGTATTTGCAAATGCTTCATAACTCTGTCTTTCCCAATAAATTCACATTCCCTTCTGTAATTCGTGCTTGTTGTATTGATAATTCTGTTGAAGAAGGGAAACAAATTCATACCCATGTTGTTAAATTTGGTTTTTCAAAAGATAGATTTTGTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGACGCTAGAAGGGTGTTTGATTGTATTGAGTTACCTGATGTTGTAGCTTGGACTACTTTGCTTACTGGGTATGCTCAATTGGGTTATGTGGATGAAAGTTTACGAGTTTTCGAGTCGATGCCTGAACGTAACTCTGCTTCTTGGAATGCTATGATTTCTTGTTTTGTTCAAAACAATAGGTTTCATGAAGCGTTTGGTTTGTTTAATAGGATGAGAATAGAGAAAGTTGTTTTGGAGAAATATGTGGCTGCTAGTATGTTATCAGCTTGTACAGGATTAGGAGCACTTGAGCAAGGGAAATGGATACATAGATATATTGAGAGAAATGGGATTGAATTTGATTCAAAACTTGCAACTACATTGATTGATATGTATTGTAAATGTGGTTGTTTGGATTGTGCTTATGAAGTGTTTGTTCATTTGCCTGAAAAAGGGATTTCTTCATGGAATTGTATGATTGGAGGGATGGCTATGCATGGGAAAGGAGAGGCTGCTATAGAACTTTTTAAAGATATGGAAACCAAAATGGTGAAACCAGACAACATAACTTTCCTTAATGTACTTAGTGCTTGTGCTCACTCTGGTTTAGTCGAAAAGGGTCAACACTATTTCTATCGTTTTACTCAAGTTTATGGTATTGAACCCAGAACCGAGCATTATGGATGCATGGTTGATTTATACGGGCGAGCCGGGTTGCTAGAGGAAGCAATGAAGGTCATAGATGAGATGCCCATGAGTCCTGACGTAGGTGTGTTAGGTGCATTTGTTGGAGCTTGTAAGATACATGGGAACATAGAGTTGGGAGAGGAAGTAGGGAAGAGAGTAATAGAACTAGAGCCTACGAATAGCGGGCGATACGTACTACTGGGAAATCTATACGCCGAGGCAGGGAGATGGGAAGGTGTTGCAGAAGTAAGAAAGTTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGAGTTTCCATGATTGAATTGGAAGGTGTGGTGTATGAATTTATAGCAGGTGGAAGGAATCATCCTGAAGCAAAGGAAATATATGATAAACTTAATGAGATGTTAGAATGTATAAGAAGTGAAGGATATGTAGCAGAGAATGAAATTGAGGAAGAGAAGGATAATCCTGTTTATTACCATAGTGAGAAACTGGCAATTGCTTTTGGGTTGCTTAAAACTAAAGCAGGGGAAATTCTTAGAATCACTAAGAATTTGAGGGTTTGTAAGGACTGTCACCAAGCTTTGAAGCTTGTTTCAAAGGTTTTTCAACGAAAAATCATTGTAAGAGATAGAAATCGTTTCCATCATTTTGGTAATGGAGAGTGTTCTTGTAATGATTATTGGTAA

Coding sequence (CDS)

ATGGCTTCACTTCTTCCCCTTCATCCCATTCCATCTCTTCCCAACTCTACTAAATTTAACCCATCACCCATTTTCCACTCCCTCAGCTCATGTTCATCAATGTCTGAACTTAAGCAATTTCACTCCCAAATCATCCGTCTCGGCCTCTCTACAGACAACAATGCAATTGGCCGTCTCATCAAATTCTGTGCTGTTTCCAAGTATGGAGATCTTCACTATGCTCTTCTTTTATTCAATTCAATCCCTTACCCAGATGCTTTTATCTACAATACTTTAATTAGAGCTTACTTACACTTCAATTCCCCTAAATCTTCTTTACTTTTGTATTTGCAAATGCTTCATAACTCTGTCTTTCCCAATAAATTCACATTCCCTTCTGTAATTCGTGCTTGTTGTATTGATAATTCTGTTGAAGAAGGGAAACAAATTCATACCCATGTTGTTAAATTTGGTTTTTCAAAAGATAGATTTTGTCAGAACAATTTGATTCATATGTATGCTAATTTTCAATCCTTGGAAGACGCTAGAAGGGTGTTTGATTGTATTGAGTTACCTGATGTTGTAGCTTGGACTACTTTGCTTACTGGGTATGCTCAATTGGGTTATGTGGATGAAAGTTTACGAGTTTTCGAGTCGATGCCTGAACGTAACTCTGCTTCTTGGAATGCTATGATTTCTTGTTTTGTTCAAAACAATAGGTTTCATGAAGCGTTTGGTTTGTTTAATAGGATGAGAATAGAGAAAGTTGTTTTGGAGAAATATGTGGCTGCTAGTATGTTATCAGCTTGTACAGGATTAGGAGCACTTGAGCAAGGGAAATGGATACATAGATATATTGAGAGAAATGGGATTGAATTTGATTCAAAACTTGCAACTACATTGATTGATATGTATTGTAAATGTGGTTGTTTGGATTGTGCTTATGAAGTGTTTGTTCATTTGCCTGAAAAAGGGATTTCTTCATGGAATTGTATGATTGGAGGGATGGCTATGCATGGGAAAGGAGAGGCTGCTATAGAACTTTTTAAAGATATGGAAACCAAAATGGTGAAACCAGACAACATAACTTTCCTTAATGTACTTAGTGCTTGTGCTCACTCTGGTTTAGTCGAAAAGGGTCAACACTATTTCTATCGTTTTACTCAAGTTTATGGTATTGAACCCAGAACCGAGCATTATGGATGCATGGTTGATTTATACGGGCGAGCCGGGTTGCTAGAGGAAGCAATGAAGGTCATAGATGAGATGCCCATGAGTCCTGACGTAGGTGTGTTAGGTGCATTTGTTGGAGCTTGTAAGATACATGGGAACATAGAGTTGGGAGAGGAAGTAGGGAAGAGAGTAATAGAACTAGAGCCTACGAATAGCGGGCGATACGTACTACTGGGAAATCTATACGCCGAGGCAGGGAGATGGGAAGGTGTTGCAGAAGTAAGAAAGTTAATGAATGATAGAGAAGTGAAGAAGGCTGCTGGAGTTTCCATGATTGAATTGGAAGGTGTGGTGTATGAATTTATAGCAGGTGGAAGGAATCATCCTGAAGCAAAGGAAATATATGATAAACTTAATGAGATGTTAGAATGTATAAGAAGTGAAGGATATGTAGCAGAGAATGAAATTGAGGAAGAGAAGGATAATCCTGTTTATTACCATAGTGAGAAACTGGCAATTGCTTTTGGGTTGCTTAAAACTAAAGCAGGGGAAATTCTTAGAATCACTAAGAATTTGAGGGTTTGTAAGGACTGTCACCAAGCTTTGAAGCTTGTTTCAAAGGTTTTTCAACGAAAAATCATTGTAAGAGATAGAAATCGTTTCCATCATTTTGGTAATGGAGAGTGTTCTTGTAATGATTATTGGTAA

Protein sequence

MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPNKFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFDCIELPDVVAWTTLLTGYAQLGYVDESLRVFESMPERNSASWNAMISCFVQNNRFHEAFGLFNRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEIEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFGNGECSCNDYW
BLAST of CsaV3_1G038900 vs. NCBI nr
Match: XP_011659892.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus])

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI
Sbjct: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN
Sbjct: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK
Sbjct: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV
Sbjct: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP
Sbjct: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK
Sbjct: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540
           LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI
Sbjct: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540

Query: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR 600
           EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR
Sbjct: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR 600

Query: 601 DRNRFHHFGNGECSCNDYW 620
           DRNRFHHFGNGECSCNDYW
Sbjct: 601 DRNRFHHFGNGECSCNDYW 619

BLAST of CsaV3_1G038900 vs. NCBI nr
Match: KGN66073.1 (hypothetical protein Csa_1G569490 [Cucumis sativus])

HSP 1 Score: 1059.3 bits (2738), Expect = 5.0e-306
Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI
Sbjct: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN
Sbjct: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK
Sbjct: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV
Sbjct: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP
Sbjct: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK
Sbjct: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540
           LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI
Sbjct: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540

Query: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR 578
           EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR
Sbjct: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR 577

BLAST of CsaV3_1G038900 vs. NCBI nr
Match: XP_022960820.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata])

HSP 1 Score: 931.8 bits (2407), Expect = 1.2e-267
Identity = 510/619 (82.39%), Postives = 555/619 (89.66%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M+SLL L P  S  NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSK GDL YALLLF +IP PDA+IYNTLIR YL    P++ LLLYL+MLH  V PN
Sbjct: 61  KFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPS+IRACCIDN++EEGKQIH HV+KFGF  DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            IELPDVV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GIELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX    EK+VL+KY+AASMLSACTGLGALEQG WIHRYI+++ I+ DSKLATTLIDMYCK
Sbjct: 241 XXXXXXEKIVLDKYMAASMLSACTGLGALEQGMWIHRYIKKSEIKLDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLD A+EVF  LPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMV PDNITFLNV
Sbjct: 301 CGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           L+ACAHSGLVEKG++YF  FTQVY I+PRTEHYGCMVDLYGRAG+L+EAM +I EMPMSP
Sbjct: 361 LNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           D GVLGAFVGACKIHGN+++GEE+GKRVIEL+P+NSGRYVLLGNLYAEAGRW+GVAEVRK
Sbjct: 421 DAGVLGAFVGACKIHGNVDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540
           LMNDREVKKAAG SMIELEGVV+EFIAGGR HPEA EIY K+ EM+ECIR  GYV E E 
Sbjct: 481 LMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEANEIYGKVKEMVECIRCVGYVTEEEE 540

Query: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR 600
           E EKDNPVYYHSEKLA+A+GLLKT+AGE LRITKNLRVCKDCHQALKLVSKVFQRKIIVR
Sbjct: 541 EVEKDNPVYYHSEKLAVAYGLLKTRAGETLRITKNLRVCKDCHQALKLVSKVFQRKIIVR 600

Query: 601 DRNRFHHFGNGECSCNDYW 620
           DRNRFHHF +GECSCNDYW
Sbjct: 601 DRNRFHHFADGECSCNDYW 618

BLAST of CsaV3_1G038900 vs. NCBI nr
Match: XP_023515687.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 922.9 bits (2384), Expect = 5.6e-265
Identity = 509/621 (81.96%), Postives = 553/621 (89.05%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M+SLL L P  S  NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1   MSSLLALQPSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSK GDL YALLLF +IP PDA+IYNTLIR YL    P++ LLLYL+MLH  V PN
Sbjct: 61  KFCAVSKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPS+IRACCIDN++EEGKQIH HV+KFGF  DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSLIRACCIDNAIEEGKQIHGHVLKFGFRTDRFSQNNLIHMYANFQSLEEARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            IELPD      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GIELPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX    EK+VL+KY+AASMLSACTGLG+LEQG WIHRYI+++ I+ DSKLATTLIDMYCK
Sbjct: 241 XXXXXSEKIVLDKYMAASMLSACTGLGSLEQGMWIHRYIKKSEIKLDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLD A+EVF  LPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMV PDNITFLNV
Sbjct: 301 CGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           L+ACAHSGLVEKG++YF  FTQVY I+PRTEHYGCMVDLYGRAG+L+EAM +I EMPMSP
Sbjct: 361 LNACAHSGLVEKGRYYFNHFTQVYDIKPRTEHYGCMVDLYGRAGMLDEAMNLIREMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           D GVLGAFVGACKIHGNI++GEE+GKRVIEL+P+NSGRYVLLGNLYAEAGRW+GVAEVRK
Sbjct: 421 DAGVLGAFVGACKIHGNIDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDGVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAE--N 540
           LMNDREVKKAAG SMIELEGVV+EFIAGGR HPEAKEIY K+NEM+ECIR  GYV E   
Sbjct: 481 LMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEAKEIYGKVNEMVECIRCVGYVTEXXX 540

Query: 541 EIEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKII 600
               EKDNPVYYHSEKLA+AFGLLKTKAGE LRITKNLRVCKDCHQALKLVSKVF+RKII
Sbjct: 541 XXXXEKDNPVYYHSEKLAVAFGLLKTKAGETLRITKNLRVCKDCHQALKLVSKVFERKII 600

Query: 601 VRDRNRFHHFGNGECSCNDYW 620
           VRDRNRFHHF +GECSCNDYW
Sbjct: 601 VRDRNRFHHFDDGECSCNDYW 620

BLAST of CsaV3_1G038900 vs. NCBI nr
Match: XP_022987211.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >XP_022987212.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])

HSP 1 Score: 900.2 bits (2325), Expect = 3.9e-258
Identity = 499/621 (80.35%), Postives = 545/621 (87.76%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M+SLL L    S  NS K + SPI H L SCSSMSELKQ+HSQIIRLGLSTDN+A+GRL+
Sbjct: 1   MSSLLALQLSASPINSPKVHTSPI-HGLKSCSSMSELKQYHSQIIRLGLSTDNDAMGRLV 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAV K GDL YALLLF +IP PDA+IYNTLIR YL    P++ LLLYL+MLH  V PN
Sbjct: 61  KFCAVCKNGDLDYALLLFKTIPNPDAYIYNTLIRGYLQLQFPRACLLLYLEMLHKCVLPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPS+IRACCIDN++EEGKQIH HV+KFGF  DRF QNNLIHMYANFQSLE+ARRVFD
Sbjct: 121 KFTFPSLIRACCIDNAIEEGKQIHAHVLKFGFRADRFSQNNLIHMYANFQSLEEARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            IELPDVV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GIELPDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX    EK+VL+KY+AASMLSACTGLGALEQG WIHRYI+++ I+ DSKLATTLIDMYCK
Sbjct: 241 XXXXXXEKIVLDKYMAASMLSACTGLGALEQGIWIHRYIKKSEIKLDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLD A+EVF  LPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMV PDNITFLNV
Sbjct: 301 CGCLDRAFEVFTQLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVTPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           L+ACAHSGLVEKG++YF  F+QVY I+PRTEHYGCMVDLYGR+G+L+EAMK+I EMPMSP
Sbjct: 361 LNACAHSGLVEKGRYYFNHFSQVYDIKPRTEHYGCMVDLYGRSGMLDEAMKLIREMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           D GVLGAFVGACKIHGNI++GEE+GKRVIEL+P+NSGRYVLLGNLYAEAGRW+ VAEVRK
Sbjct: 421 DAGVLGAFVGACKIHGNIDMGEEIGKRVIELDPSNSGRYVLLGNLYAEAGRWDSVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECI--RSEGYVAEN 540
           LMNDREVKKAAG SMIELEGVV+EFIAGGR HPEAKEIY K+NEM+ECI           
Sbjct: 481 LMNDREVKKAAGFSMIELEGVVHEFIAGGRGHPEAKEIYGKVNEMIECIXXXXXXXXXXX 540

Query: 541 EIEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKII 600
                 DNPVYYHSEKLA+AFGLLKT+AGE LRITKNLRVCKDCHQALKLVSKVF+RK I
Sbjct: 541 XXXXXXDNPVYYHSEKLAVAFGLLKTQAGETLRITKNLRVCKDCHQALKLVSKVFERKFI 600

Query: 601 VRDRNRFHHFGNGECSCNDYW 620
           VRDRNRFHHF +GECSCNDYW
Sbjct: 601 VRDRNRFHHFADGECSCNDYW 620

BLAST of CsaV3_1G038900 vs. TAIR10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 481.5 bits (1238), Expect = 7.9e-136
Identity = 297/600 (49.50%), Postives = 399/600 (66.50%), Query Frame = 0

Query: 28  LSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVSKYGD-LHYALLLFNSIPYPDA 87
           L  CS   ELKQ H+++++ GL  D+ AI + + FC  S   D L YA ++F+    PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 88  FIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPNKFTFPSVIRACCIDNSVEEGKQIHTH 147
           F++N +IR +   + P+ SLLLY +ML +S   N +TFPS+++AC   ++ EE  QIH  
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 148 VVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFDCIELPDVVAWTTXXXXXXXXXXXXXX 207
           + K G+  D +  N+LI+ YA   + + A  +FD I  P       XXXXXXXXXXXXXX
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXXXX 200

Query: 208 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVLEKYVAASMLSACTGL 267
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V  +    A+ LSAC  L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACAQL 260

Query: 268 GALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLPEKGISSWNCMI 327
           GALEQGKWIH Y+ +  I  DS L   LIDMY KCG ++ A EVF ++ +K + +W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 328 GGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQHYFYRFTQVYGI 387
            G A HG G  AI  F +M+   +KP+ ITF  VL+AC+++GLVE+G+  FY   + Y +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 388 EPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIHGNIELGEEVGK 447
           +P  EHYGC+VDL GRAGLL+EA + I EMP+ P+  + GA + AC+IH NIELGEE+G+
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440

Query: 448 RVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSMIELEGVVYEFI 507
            +I ++P + GRYV   N++A   +W+  AE R+LM ++ V K  G S I LEG  +EF+
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500

Query: 508 AGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE-------IEEEKDNPVYYHSEKLAIAF 567
           AG R+HPE ++I  K   M   +   GYV E E        ++E++  V+ HSEKLAI +
Sbjct: 501 AGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITY 560

Query: 568 GLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFGNGECSCNDYW 620
           GL+KTK G I+RI KNLRVCKDCH+  KL+SK+++R I++RDR RFHHF +G+CSC DYW
Sbjct: 561 GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of CsaV3_1G038900 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 474.6 bits (1220), Expect = 9.6e-134
Identity = 272/630 (43.17%), Postives = 392/630 (62.22%), Query Frame = 0

Query: 15  NSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVS--KYGDLH 74
           +S   +PS +F  +++C ++ +L Q H+  I+ G   D  A   +++FCA S   + DL 
Sbjct: 17  SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76

Query: 75  YALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSL---LLYLQMLHNSVFPNKFTFPSVIR 134
           YA  +FN +P  + F +NT+IR +   +  K+ +   L Y  M    V PN+FTFPSV++
Sbjct: 77  YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136

Query: 135 ACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVF-------DCI 194
           AC     ++EGKQIH   +K+GF  D F  +NL+ MY     ++DAR +F       D +
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196

Query: 195 ELPD-------VVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
            + D       +V W                     XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXX 256

Query: 255 XXXXXXXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLI 314
           XXXXXXX      +        S+L A + LG+LE G+W+H Y E +GI  D  L + LI
Sbjct: 257 XXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316

Query: 315 DMYCKCGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNI 374
           DMY KCG ++ A  VF  LP + + +W+ MI G A+HG+   AI+ F  M    V+P ++
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376

Query: 375 TFLNVLSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDE 434
            ++N+L+AC+H GLVE+G+ YF +   V G+EPR EHYGCMVDL GR+GLL+EA + I  
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436

Query: 435 MPMSPDVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGV 494
           MP+ PD  +  A +GAC++ GN+E+G+ V   ++++ P +SG YV L N+YA  G W  V
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496

Query: 495 AEVRKLMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGY- 554
           +E+R  M +++++K  G S+I+++GV++EF+    +HP+AKEI   L E+ + +R  GY 
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556

Query: 555 -----VAENEIEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLV 614
                V  N  EE+K+N ++YHSEK+A AFGL+ T  G+ +RI KNLR+C+DCH ++KL+
Sbjct: 557 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 616

Query: 615 SKVFQRKIIVRDRNRFHHFGNGECSCNDYW 620
           SKV++RKI VRDR RFHHF +G CSC DYW
Sbjct: 617 SKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of CsaV3_1G038900 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 459.5 bits (1181), Expect = 3.2e-129
Identity = 262/730 (35.89%), Postives = 374/730 (51.23%), Query Frame = 0

Query: 2   ASLLPLHPIPSL--PNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRL 61
           +S  P H +PS   P        P    L +C ++  L+  H+Q+I++GL   N A+ +L
Sbjct: 12  SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71

Query: 62  IKFCAVSKYGD-LHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVF 121
           I+FC +S + + L YA+ +F +I  P+  I+NT+ R +   + P S+L LY+ M+   + 
Sbjct: 72  IEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL 131

Query: 122 PNKFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRV 181
           PN +TFP V+++C    + +EG+QIH HV+K G   D +   +LI MY     LEDA +V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191

Query: 182 FD---------------------------------------------------------- 241
           FD                                                          
Sbjct: 192 FDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 242 -----------------------------CIEL-PDVVAWTTXXXXXXXXXXXXXXXXXX 301
                                         IEL   V  W                    
Sbjct: 252 XXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVL-------------EKYVAA 361
                                            M + K  L                   
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371

Query: 362 SMLSACTGLGALEQGKWIHRYIER--NGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLP 421
           S+L AC  LGA++ G+WIH YI++   G+   S L T+LIDMY KCG ++ A++VF  + 
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431

Query: 422 EKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQH 481
            K +SSWN MI G AMHG+ +A+ +LF  M    ++PD+ITF+ +LSAC+HSG+++ G+H
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491

Query: 482 YFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIH 541
            F   TQ Y + P+ EHYGCM+DL G +GL +EA ++I+ M M PD  +  + + ACK+H
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551

Query: 542 GNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSM 601
           GN+ELGE   + +I++EP N G YVLL N+YA AGRW  VA+ R L+ND+ +KK  G S 
Sbjct: 552 GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSS 611

Query: 602 IELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAE-----NEIEEE-KDNPVY 620
           IE++ VV+EFI G + HP  +EIY  L EM   +   G+V +      E+EEE K+  + 
Sbjct: 612 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALR 671

BLAST of CsaV3_1G038900 vs. TAIR10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 456.1 bits (1172), Expect = 3.5e-128
Identity = 292/727 (40.17%), Postives = 408/727 (56.12%), Query Frame = 0

Query: 5   LPLHPIPSLPNSTKFNPSPIFH--SLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKF 64
           LP HP  S PN    N     H   +  C S+ +LKQ H  +IR G  +D  +  +L   
Sbjct: 12  LPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAM 71

Query: 65  CAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNS-VFPNK 124
            A+S +  L YA  +F+ IP P++F +NTLIRAY     P  S+  +L M+  S  +PNK
Sbjct: 72  AALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNK 131

Query: 125 FTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIH----------------- 184
           +TFP +I+A    +S+  G+ +H   VK     D F  N+LIH                 
Sbjct: 132 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 191

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 192 IKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMVGVLSACAKIRNLEFG 251

Query: 245 ------------------------MYANFQSLEDARRVFDCIELPDVVAWTTXXXXXXXX 304
                                   MY    S+EDA+R+FD +E  D V WT XXXXXXXX
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTXXXXXXXXX 311

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEK-VVLEKYVAASM 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             ++++K + L +    S 
Sbjct: 312 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKPNEALIVFHELQLQKNMKLNQITLVST 371

Query: 365 LSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLPEKGI 424
           LSAC  +GALE G+WIH YI+++GI  +  + + LI MY KCG L+ + EVF  + ++ +
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431

Query: 425 SSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQHYFYR 484
             W+ MIGG+AMHG G  A+++F  M+   VKP+ +TF NV  AC+H+GLV++ +  F++
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491

Query: 485 FTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIHGNIE 544
               YGI P  +HY C+VD+ GR+G LE+A+K I+ MP+ P   V GA +GACKIH N+ 
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 551

Query: 545 LGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSMIELE 604
           L E    R++ELEP N G +VLL N+YA+ G+WE V+E+RK M    +KK  G S IE++
Sbjct: 552 LAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611

Query: 605 GVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAE-------NEIEEEKDNPVYYHS 620
           G+++EF++G   HP ++++Y KL+E++E ++S GY  E        E EE K+  +  HS
Sbjct: 612 GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHS 671

BLAST of CsaV3_1G038900 vs. TAIR10
Match: AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 426.0 bits (1094), Expect = 3.9e-119
Identity = 269/611 (44.03%), Postives = 381/611 (62.36%), Query Frame = 0

Query: 17  TKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVSKYGDLHYALL 76
           ++    P    L S  +  E++Q H+++   G   D++ +G  +K  A+S +  L YA  
Sbjct: 2   SRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQ 61

Query: 77  LFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLH--NSVFPNKFTFPSVIRACCID 136
           + +    P  F  N++IRA+     P+ S   Y ++L   N + P+ +T   +++AC   
Sbjct: 62  ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121

Query: 137 NSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFDCIELPDVVAWTTXX 196
              E G Q+H   ++ GF  D   Q  LI +YA    L+   +VF+ I  PD V    XX
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRXXXX 181

Query: 197 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVLEKY 256
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      M++E V +   
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVFHLMQLEGVKVNGV 241

Query: 257 VAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHL 316
              S+LSACT LGAL+QG+W H YIERN I+   +LATTL+D+Y KCG ++ A EVF  +
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301

Query: 317 PEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQ 376
            EK + +W+  + G+AM+G GE  +ELF  M+   V P+ +TF++VL  C+  G V++GQ
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361

Query: 377 HYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKI 436
            +F      +GIEP+ EHYGC+VDLY RAG LE+A+ +I +MPM P   V  + + A ++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421

Query: 437 HGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVS 496
           + N+ELG    K+++ELE  N G YVLL N+YA++  W+ V+ VR+ M  + V+K  G S
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481

Query: 497 MIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE------IEEEKDNPV 556
           ++E+ G V+EF  G ++HP+  +I     ++   +R  GY A+         EEEK++ +
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 541

Query: 557 YYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHF 616
             HSEK AIAFG++  K    +RI KNLRVC DCHQ   ++SK+F R+IIVRDRNRFHHF
Sbjct: 542 CLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 601

Query: 617 GNGECSCNDYW 620
            +G CSCN +W
Sbjct: 602 KDGHCSCNGFW 612

BLAST of CsaV3_1G038900 vs. Swiss-Prot
Match: sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-134
Identity = 297/600 (49.50%), Postives = 399/600 (66.50%), Query Frame = 0

Query: 28  LSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVSKYGD-LHYALLLFNSIPYPDA 87
           L  CS   ELKQ H+++++ GL  D+ AI + + FC  S   D L YA ++F+    PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 88  FIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPNKFTFPSVIRACCIDNSVEEGKQIHTH 147
           F++N +IR +   + P+ SLLLY +ML +S   N +TFPS+++AC   ++ EE  QIH  
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 148 VVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFDCIELPDVVAWTTXXXXXXXXXXXXXX 207
           + K G+  D +  N+LI+ YA   + + A  +FD I  P       XXXXXXXXXXXXXX
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXXXXXXXX 200

Query: 208 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVLEKYVAASMLSACTGL 267
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      V  +    A+ LSAC  L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANALSACAQL 260

Query: 268 GALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLPEKGISSWNCMI 327
           GALEQGKWIH Y+ +  I  DS L   LIDMY KCG ++ A EVF ++ +K + +W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 328 GGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQHYFYRFTQVYGI 387
            G A HG G  AI  F +M+   +KP+ ITF  VL+AC+++GLVE+G+  FY   + Y +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 388 EPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIHGNIELGEEVGK 447
           +P  EHYGC+VDL GRAGLL+EA + I EMP+ P+  + GA + AC+IH NIELGEE+G+
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440

Query: 448 RVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSMIELEGVVYEFI 507
            +I ++P + GRYV   N++A   +W+  AE R+LM ++ V K  G S I LEG  +EF+
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500

Query: 508 AGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE-------IEEEKDNPVYYHSEKLAIAF 567
           AG R+HPE ++I  K   M   +   GYV E E        ++E++  V+ HSEKLAI +
Sbjct: 501 AGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITY 560

Query: 568 GLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHFGNGECSCNDYW 620
           GL+KTK G I+RI KNLRVCKDCH+  KL+SK+++R I++RDR RFHHF +G+CSC DYW
Sbjct: 561 GLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of CsaV3_1G038900 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.7e-132
Identity = 272/630 (43.17%), Postives = 392/630 (62.22%), Query Frame = 0

Query: 15  NSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVS--KYGDLH 74
           +S   +PS +F  +++C ++ +L Q H+  I+ G   D  A   +++FCA S   + DL 
Sbjct: 17  SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76

Query: 75  YALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSL---LLYLQMLHNSVFPNKFTFPSVIR 134
           YA  +FN +P  + F +NT+IR +   +  K+ +   L Y  M    V PN+FTFPSV++
Sbjct: 77  YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136

Query: 135 ACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVF-------DCI 194
           AC     ++EGKQIH   +K+GF  D F  +NL+ MY     ++DAR +F       D +
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196

Query: 195 ELPD-------VVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
            + D       +V W                     XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXX 256

Query: 255 XXXXXXXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLI 314
           XXXXXXX      +        S+L A + LG+LE G+W+H Y E +GI  D  L + LI
Sbjct: 257 XXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316

Query: 315 DMYCKCGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNI 374
           DMY KCG ++ A  VF  LP + + +W+ MI G A+HG+   AI+ F  M    V+P ++
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376

Query: 375 TFLNVLSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDE 434
            ++N+L+AC+H GLVE+G+ YF +   V G+EPR EHYGCMVDL GR+GLL+EA + I  
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436

Query: 435 MPMSPDVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGV 494
           MP+ PD  +  A +GAC++ GN+E+G+ V   ++++ P +SG YV L N+YA  G W  V
Sbjct: 437 MPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 496

Query: 495 AEVRKLMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGY- 554
           +E+R  M +++++K  G S+I+++GV++EF+    +HP+AKEI   L E+ + +R  GY 
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556

Query: 555 -----VAENEIEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLV 614
                V  N  EE+K+N ++YHSEK+A AFGL+ T  G+ +RI KNLR+C+DCH ++KL+
Sbjct: 557 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 616

Query: 615 SKVFQRKIIVRDRNRFHHFGNGECSCNDYW 620
           SKV++RKI VRDR RFHHF +G CSC DYW
Sbjct: 617 SKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of CsaV3_1G038900 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.8e-128
Identity = 262/730 (35.89%), Postives = 374/730 (51.23%), Query Frame = 0

Query: 2   ASLLPLHPIPSL--PNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRL 61
           +S  P H +PS   P        P    L +C ++  L+  H+Q+I++GL   N A+ +L
Sbjct: 12  SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71

Query: 62  IKFCAVSKYGD-LHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVF 121
           I+FC +S + + L YA+ +F +I  P+  I+NT+ R +   + P S+L LY+ M+   + 
Sbjct: 72  IEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL 131

Query: 122 PNKFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRV 181
           PN +TFP V+++C    + +EG+QIH HV+K G   D +   +LI MY     LEDA +V
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191

Query: 182 FD---------------------------------------------------------- 241
           FD                                                          
Sbjct: 192 FDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 242 -----------------------------CIEL-PDVVAWTTXXXXXXXXXXXXXXXXXX 301
                                         IEL   V  W                    
Sbjct: 252 XXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVL-------------EKYVAA 361
                                            M + K  L                   
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371

Query: 362 SMLSACTGLGALEQGKWIHRYIER--NGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLP 421
           S+L AC  LGA++ G+WIH YI++   G+   S L T+LIDMY KCG ++ A++VF  + 
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431

Query: 422 EKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQH 481
            K +SSWN MI G AMHG+ +A+ +LF  M    ++PD+ITF+ +LSAC+HSG+++ G+H
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491

Query: 482 YFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIH 541
            F   TQ Y + P+ EHYGCM+DL G +GL +EA ++I+ M M PD  +  + + ACK+H
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551

Query: 542 GNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSM 601
           GN+ELGE   + +I++EP N G YVLL N+YA AGRW  VA+ R L+ND+ +KK  G S 
Sbjct: 552 GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSS 611

Query: 602 IELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAE-----NEIEEE-KDNPVY 620
           IE++ VV+EFI G + HP  +EIY  L EM   +   G+V +      E+EEE K+  + 
Sbjct: 612 IEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALR 671

BLAST of CsaV3_1G038900 vs. Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 6.4e-127
Identity = 292/727 (40.17%), Postives = 408/727 (56.12%), Query Frame = 0

Query: 5   LPLHPIPSLPNSTKFNPSPIFH--SLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKF 64
           LP HP  S PN    N     H   +  C S+ +LKQ H  +IR G  +D  +  +L   
Sbjct: 12  LPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAM 71

Query: 65  CAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNS-VFPNK 124
            A+S +  L YA  +F+ IP P++F +NTLIRAY     P  S+  +L M+  S  +PNK
Sbjct: 72  AALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNK 131

Query: 125 FTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIH----------------- 184
           +TFP +I+A    +S+  G+ +H   VK     D F  N+LIH                 
Sbjct: 132 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 191

Query: 185 ------------------------------------------------------------ 244
                                                                       
Sbjct: 192 IKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMVGVLSACAKIRNLEFG 251

Query: 245 ------------------------MYANFQSLEDARRVFDCIELPDVVAWTTXXXXXXXX 304
                                   MY    S+EDA+R+FD +E  D V WT XXXXXXXX
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTXXXXXXXXX 311

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEK-VVLEKYVAASM 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             ++++K + L +    S 
Sbjct: 312 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKPNEALIVFHELQLQKNMKLNQITLVST 371

Query: 365 LSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHLPEKGI 424
           LSAC  +GALE G+WIH YI+++GI  +  + + LI MY KCG L+ + EVF  + ++ +
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431

Query: 425 SSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQHYFYR 484
             W+ MIGG+AMHG G  A+++F  M+   VKP+ +TF NV  AC+H+GLV++ +  F++
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491

Query: 485 FTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKIHGNIE 544
               YGI P  +HY C+VD+ GR+G LE+A+K I+ MP+ P   V GA +GACKIH N+ 
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 551

Query: 545 LGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVSMIELE 604
           L E    R++ELEP N G +VLL N+YA+ G+WE V+E+RK M    +KK  G S IE++
Sbjct: 552 LAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611

Query: 605 GVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAE-------NEIEEEKDNPVYYHS 620
           G+++EF++G   HP ++++Y KL+E++E ++S GY  E        E EE K+  +  HS
Sbjct: 612 GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHS 671

BLAST of CsaV3_1G038900 vs. Swiss-Prot
Match: sp|Q9FND7|PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 7.1e-118
Identity = 269/611 (44.03%), Postives = 381/611 (62.36%), Query Frame = 0

Query: 17  TKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLIKFCAVSKYGDLHYALL 76
           ++    P    L S  +  E++Q H+++   G   D++ +G  +K  A+S +  L YA  
Sbjct: 2   SRIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQ 61

Query: 77  LFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLH--NSVFPNKFTFPSVIRACCID 136
           + +    P  F  N++IRA+     P+ S   Y ++L   N + P+ +T   +++AC   
Sbjct: 62  ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121

Query: 137 NSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFDCIELPDVVAWTTXX 196
              E G Q+H   ++ GF  D   Q  LI +YA    L+   +VF+ I  PD V    XX
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRXXXX 181

Query: 197 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRIEKVVLEKY 256
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      M++E V +   
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVFHLMQLEGVKVNGV 241

Query: 257 VAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCKCGCLDCAYEVFVHL 316
              S+LSACT LGAL+QG+W H YIERN I+   +LATTL+D+Y KCG ++ A EVF  +
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301

Query: 317 PEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNVLSACAHSGLVEKGQ 376
            EK + +W+  + G+AM+G GE  +ELF  M+   V P+ +TF++VL  C+  G V++GQ
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361

Query: 377 HYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSPDVGVLGAFVGACKI 436
            +F      +GIEP+ EHYGC+VDLY RAG LE+A+ +I +MPM P   V  + + A ++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421

Query: 437 HGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRKLMNDREVKKAAGVS 496
           + N+ELG    K+++ELE  N G YVLL N+YA++  W+ V+ VR+ M  + V+K  G S
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481

Query: 497 MIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE------IEEEKDNPV 556
           ++E+ G V+EF  G ++HP+  +I     ++   +R  GY A+         EEEK++ +
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 541

Query: 557 YYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVRDRNRFHHF 616
             HSEK AIAFG++  K    +RI KNLRVC DCHQ   ++SK+F R+IIVRDRNRFHHF
Sbjct: 542 CLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 601

Query: 617 GNGECSCNDYW 620
            +G CSCN +W
Sbjct: 602 KDGHCSCNGFW 612

BLAST of CsaV3_1G038900 vs. TrEMBL
Match: tr|A0A0A0LWF1|A0A0A0LWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 3.3e-306
Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI
Sbjct: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN
Sbjct: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD
Sbjct: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK
Sbjct: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV
Sbjct: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP
Sbjct: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK
Sbjct: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540
           LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI
Sbjct: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540

Query: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR 578
           EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR
Sbjct: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLR 577

BLAST of CsaV3_1G038900 vs. TrEMBL
Match: tr|A0A1S4DZ62|A0A1S4DZ62_CUCME (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492169 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 5.8e-234
Identity = 430/619 (69.47%), Postives = 439/619 (70.92%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M SLLPLHPIPSLPNS KFNPSPIF +L+SCSSMSELKQFHSQIIRLGLSTDNNAIGRLI
Sbjct: 1   MGSLLPLHPIPSLPNSPKFNPSPIFQALNSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCAVSK                                                     
Sbjct: 61  KFCAVSK----------------------------------------------------- 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
              MR+EKVVLEK+VAASMLSACTGLGAL+QGKWIHRYIE+NGIEFDSKLATTLIDMYCK
Sbjct: 241 ---MRLEKVVLEKFVAASMLSACTGLGALDQGKWIHRYIEKNGIEFDSKLATTLIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFK+METKMVKPDNITFLNV
Sbjct: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKEMETKMVKPDNITFLNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVEKGQHYF RFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP
Sbjct: 361 LSACAHSGLVEKGQHYFNRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK
Sbjct: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 443

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENEI 540
           LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIR+EGY+AENEI
Sbjct: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRNEGYIAENEI 443

Query: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR 600
           EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR
Sbjct: 541 EEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQRKIIVR 443

Query: 601 DRNRFHHFGNGECSCNDYW 620
           DRNRFHHFGNGECSCNDYW
Sbjct: 601 DRNRFHHFGNGECSCNDYW 443

BLAST of CsaV3_1G038900 vs. TrEMBL
Match: tr|A0A200R1T0|A0A200R1T0_9MAGN (Pentatricopeptide repeat OS=Macleaya cordata OX=56857 GN=BVC80_1543g89 PE=4 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 4.2e-232
Identity = 452/625 (72.32%), Postives = 520/625 (83.20%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           MAS + L   P  P+S K + S   H L SCS+M+ELKQFHS+IIRLGLS DN+A+GR+I
Sbjct: 1   MASPVLLPASPPSPSSPKTHLSS-SHGLESCSTMAELKQFHSKIIRLGLSKDNDAMGRVI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCA+SK GDL+YAL +F+ IP+PD FIYNT+IR Y      K+ +LLY QML  SVFPN
Sbjct: 61  KFCAISKSGDLNYALKVFDEIPHPDTFIYNTIIRGYCQAQLTKNCILLYSQMLQESVFPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFTFP V+RACCI N++EE KQIH H++KF F  D+FCQNNLIHMY NFQ L++ARRVFD
Sbjct: 121 KFTFPCVVRACCIGNAIEEAKQIHAHILKFAFEGDKFCQNNLIHMYVNFQYLDEARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            +   D V+WT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 KMPQRDFVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX    EKV L+K+VAASMLSACTGLGALEQG+WIH YI+++GIE DSKLATT+IDMYCK
Sbjct: 241 XXXXXXEKVELDKFVAASMLSACTGLGALEQGEWIHGYIKKSGIELDSKLATTIIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCLD A+EVF  L  KGISSWNCMIGG+AMHGKGEAAIELF++M+ +MV PD ITF+N+
Sbjct: 301 CGCLDKAFEVFNGLTHKGISSWNCMIGGIAMHGKGEAAIELFEEMQKEMVAPDGITFVNL 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAH+GL+E+G+ YF+   +VYGIEP+ EHYGCMVDL GRAG LE+A K+IDEM MSP
Sbjct: 361 LSACAHTGLIEEGRRYFHLMKEVYGIEPKMEHYGCMVDLLGRAGFLEDARKLIDEMHMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           D GVLGA +GACKIHG IELGE++GKRVIELEP NSGRYVLL NLYA  GRW+ VA++RK
Sbjct: 421 DAGVLGALLGACKIHGEIELGEQIGKRVIELEPHNSGRYVLLANLYANVGRWDDVAKMRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE- 540
           LMNDR VKK  G SMIELEGVV EFIAGGR HP+AKEIY K++EMLE IRS GYV E + 
Sbjct: 481 LMNDRGVKKLPGFSMIELEGVVSEFIAGGRTHPQAKEIYAKVDEMLERIRSIGYVPETDG 540

Query: 541 -----IEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQ 600
                 EEEK+NP+YYHSEKLAIAFGLLKTK G  +RI+KNLRVCKDCHQA K +SKVF 
Sbjct: 541 VLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGSTIRISKNLRVCKDCHQASKFISKVFD 600

Query: 601 RKIIVRDRNRFHHFGNGECSCNDYW 620
           R+I+VRDRNRFHHF  GECSC DYW
Sbjct: 601 REIVVRDRNRFHHFSKGECSCKDYW 624

BLAST of CsaV3_1G038900 vs. TrEMBL
Match: tr|M5Y189|M5Y189_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G105500 PE=4 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 9.3e-232
Identity = 452/625 (72.32%), Postives = 522/625 (83.52%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M SL  L   P   +S K   SP+   + SCS+M+EL+Q HS++IRLGL+ DN+A+GR+I
Sbjct: 1   MTSLQVLQATPPHLSSPKTQISPL-RGIESCSTMAELRQLHSKVIRLGLAADNDAMGRVI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCA+SK GDL YAL +F+++ +PDAFIYNT++R YL  + P++ ++LY QML +SV PN
Sbjct: 61  KFCALSKNGDLGYALQVFDTMLHPDAFIYNTVMRGYLQCHLPRNCIVLYSQMLQDSVTPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           K+TFPSVIRACC D+++ EGKQ+H HVVK G+  D FCQNNLIHMY  FQSLE+ARRVFD
Sbjct: 121 KYTFPSVIRACCNDDAIGEGKQVHAHVVKLGYGADGFCQNNLIHMYVKFQSLEEARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            +   D V+WT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 KMLRMDAVSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX   +EKV L+K++AASMLSACTGLGALEQGKWIH YIE++GIE DSKLATT+IDMYCK
Sbjct: 241 XXXXXVEKVELDKFMAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTIIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCL+ A+EVF  LP KGISSWNCMIGG+AMHGKGEAAIELF+ M+  MV PDNITF+NV
Sbjct: 301 CGCLEKAFEVFNGLPHKGISSWNCMIGGLAMHGKGEAAIELFEKMQRDMVAPDNITFVNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVE+GQ YF    +V+GIEPR EH+GCMVDL GRAG+LEEA K+I EMPMSP
Sbjct: 361 LSACAHSGLVEEGQRYFQSMVEVHGIEPRKEHFGCMVDLLGRAGMLEEARKLISEMPMSP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           DVGVLGA +GACKIHGN+ELGE +G+ VIELEP NSGRYVLL NLYA AGRWE VA VR+
Sbjct: 421 DVGVLGALLGACKIHGNVELGEHIGRIVIELEPENSGRYVLLANLYANAGRWEDVANVRR 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE- 540
           LMNDR VKK  G SMIELEGVV EFIAGG  HP+ KEIY K++EML+CIRS GYV + E 
Sbjct: 481 LMNDRGVKKVPGFSMIELEGVVNEFIAGGGAHPQTKEIYAKVDEMLKCIRSAGYVPDTEG 540

Query: 541 -----IEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQ 600
                 EEEK+NP+YYHSEKLAIAFGLLKTK GE LRI+KNLRVCKDCHQA KL+SKVF 
Sbjct: 541 VLHDLDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRVCKDCHQASKLISKVFD 600

Query: 601 RKIIVRDRNRFHHFGNGECSCNDYW 620
           R+IIVRDRNRFHHF  G+CSC DYW
Sbjct: 601 REIIVRDRNRFHHFKRGDCSCKDYW 624

BLAST of CsaV3_1G038900 vs. TrEMBL
Match: tr|F6H9I8|F6H9I8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0069g00930 PE=4 SV=1)

HSP 1 Score: 795.4 bits (2053), Expect = 9.0e-227
Identity = 447/625 (71.52%), Postives = 517/625 (82.72%), Query Frame = 0

Query: 1   MASLLPLHPIPSLPNSTKFNPSPIFHSLSSCSSMSELKQFHSQIIRLGLSTDNNAIGRLI 60
           M+SL  L   P   +S K +  P++  L SCS+M+ELKQ+HSQIIRLGLS DN+A+GR+I
Sbjct: 1   MSSLQLLQASPPSLSSAKAHKLPLY-GLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVI 60

Query: 61  KFCAVSKYGDLHYALLLFNSIPYPDAFIYNTLIRAYLHFNSPKSSLLLYLQMLHNSVFPN 120
           KFCA+SK GDL+YAL +F+ IP+PDA+IYNT+ R YL +   ++ + +Y +MLH SV PN
Sbjct: 61  KFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPN 120

Query: 121 KFTFPSVIRACCIDNSVEEGKQIHTHVVKFGFSKDRFCQNNLIHMYANFQSLEDARRVFD 180
           KFT+P +IRACCID ++EEGKQIH HV+KFGF  D F  NNLIHMY NFQSLE ARRVFD
Sbjct: 121 KFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFD 180

Query: 181 CIELPDVVAWTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            +   DVV    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NMPQRDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXRMRIEKVVLEKYVAASMLSACTGLGALEQGKWIHRYIERNGIEFDSKLATTLIDMYCK 300
           XX        L+K+VAASMLSACTGLGALEQGKWIH YIE++GIE DSKLATT+IDMYCK
Sbjct: 241 XXXXXXXXXXLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCK 300

Query: 301 CGCLDCAYEVFVHLPEKGISSWNCMIGGMAMHGKGEAAIELFKDMETKMVKPDNITFLNV 360
           CGCL+ A EVF  LP+KGISSWNCMIGG+AMHGKGEAAIELFK+ME +MV PD ITF+NV
Sbjct: 301 CGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV 360

Query: 361 LSACAHSGLVEKGQHYFYRFTQVYGIEPRTEHYGCMVDLYGRAGLLEEAMKVIDEMPMSP 420
           LSACAHSGLVE+G+HYF   T+V G++P  EH+GCMVDL GRAGLLEEA K+I+EMP++P
Sbjct: 361 LSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNP 420

Query: 421 DVGVLGAFVGACKIHGNIELGEEVGKRVIELEPTNSGRYVLLGNLYAEAGRWEGVAEVRK 480
           D GVLGA VGAC+IHGN ELGE++GK+VIELEP NSGRYVLL NLYA AGRWE VA+VRK
Sbjct: 421 DAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRK 480

Query: 481 LMNDREVKKAAGVSMIELEGVVYEFIAGGRNHPEAKEIYDKLNEMLECIRSEGYVAENE- 540
           LMNDR VKKA G SMIE E  V EFIAGGR HP+AKEIY KL+E+LE IRS GYV + + 
Sbjct: 481 LMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDG 540

Query: 541 -----IEEEKDNPVYYHSEKLAIAFGLLKTKAGEILRITKNLRVCKDCHQALKLVSKVFQ 600
                 EEEK+NP+YYHSEKLAIAFGLLKTK GE LRI+KNLR+C+DCHQA KL+SKV+ 
Sbjct: 541 VLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYD 600

Query: 601 RKIIVRDRNRFHHFGNGECSCNDYW 620
           R+II+RDRNRFHHF  G CSC DYW
Sbjct: 601 REIIIRDRNRFHHFRMGGCSCKDYW 624

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659892.10.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis s... [more]
KGN66073.15.0e-306100.00hypothetical protein Csa_1G569490 [Cucumis sativus][more]
XP_022960820.11.2e-26782.39pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata][more]
XP_023515687.15.6e-26581.96pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita pepo subsp... [more]
XP_022987211.13.9e-25880.35pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] >X... [more]
Match NameE-valueIdentityDescription
AT5G66520.17.9e-13649.50Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.19.6e-13443.17Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.13.2e-12935.89Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.13.5e-12840.17Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G40405.13.9e-11944.03Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9FJY7|PP449_ARATH1.4e-13449.50Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
sp|Q9FI80|PP425_ARATH1.7e-13243.17Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN01|PPR21_ARATH5.8e-12835.89Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|O82380|PP175_ARATH6.4e-12740.17Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
sp|Q9FND7|PP410_ARATH7.1e-11844.03Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LWF1|A0A0A0LWF1_CUCSA3.3e-306100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569490 PE=4 SV=1[more]
tr|A0A1S4DZ62|A0A1S4DZ62_CUCME5.8e-23469.47pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... [more]
tr|A0A200R1T0|A0A200R1T0_9MAGN4.2e-23272.32Pentatricopeptide repeat OS=Macleaya cordata OX=56857 GN=BVC80_1543g89 PE=4 SV=1[more]
tr|M5Y189|M5Y189_PRUPE9.3e-23272.32Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G105500 PE=4 SV=1[more]
tr|F6H9I8|F6H9I8_VITVI9.0e-22771.52Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0069g00930 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G038900.1CsaV3_1G038900.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 383..546
e-value: 2.2E-12
score: 49.1
coord: 265..382
e-value: 1.8E-26
score: 95.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 184..249
e-value: 7.8E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 24..183
e-value: 5.8E-23
score: 83.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 502..522
coord: 197..241
coord: 436..472
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 492..608
e-value: 3.4E-33
score: 114.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 84..132
e-value: 1.1E-8
score: 35.0
coord: 318..365
e-value: 1.7E-10
score: 40.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 220..245
e-value: 2.1E-7
score: 30.6
coord: 188..217
e-value: 3.6E-6
score: 26.7
coord: 392..417
e-value: 3.3E-5
score: 23.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 292..320
e-value: 0.0017
score: 16.4
coord: 188..217
e-value: 7.2E-5
score: 20.7
coord: 321..353
e-value: 1.1E-5
score: 23.3
coord: 220..250
e-value: 9.8E-8
score: 29.7
coord: 393..416
e-value: 2.6E-4
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 85..119
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..317
score: 7.881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..388
score: 7.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 389..419
score: 8.451
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..251
score: 7.574
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 6.511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 155..185
score: 5.59
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 318..352
score: 10.194
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..154
score: 8.057
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 6.577
NoneNo IPR availablePANTHERPTHR24015:SF615SUBFAMILY NOT NAMEDcoord: 34..542
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 34..542