Csa6G519490 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G519490
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionWGS project CAID00000000 data, contig chromosome 06; contains IPR011719 (Conserved hypothetical protein CHP02058), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain)
LocationChr6 : 27569254 .. 27573890 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAAAGCTTCGTAATTCCCTTCCAACTACGGACATGGATACGTAGCTCTTTTTTACGCATCTAGCAGCTCAGATGACAAGCTCCATACTTCTAAATCTGCAATTTCTTTCGATAACTGATTCTAGGTTTCGTTCTTACTCTCTTTCCAATCATCTTTCTTCATCTCCGCATTTGATCTGCTCTCTTACACGCCCTCGAATTTCTCGCCTTATCAAAGTTACTGCTGTATCCTCCATGGAGGTCGAGCAAGGTGGAGAATCTGCACCTGTTGACAGCACAGTTCCGCCCATGAAGCTCTTGTTCGTTGAAATGGGTGTTGGCTACGATCAACACGGGTGAATTCTCAGCTCTTTCTCTTGTTTTAAGTGTTCATTTCAGTAATAGAACTGCAAACAATGAGATTAACGAGTGGATTTCTATTTTGCCACAGCCAAGACGTCACGGCTGCTGCAATGCGAGCCTGCAGGGATGCAATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTATATGTATCCCAGTGGGTTTTATATTCTCGCGGTATTTGTTATTTGCTTAGTTAATCACGTTTGACAGAAGATAAGAGTTTCTGAAATCAGCTACTTCTTCTGGCACCGCCCTGGATTTATTTTCAAGTTTAGAATCTCAATTTTATGGTTACTTCTGGCTTCTACATATTGCGTGTATATTGAAAGACGTTTCTGCTTTTATTATGTTAATATTATAATTAGGACTAATAACAAAGTGTTATGTAGGTTCCATTCCTGGAGTCTCATTTGGAGAGATGAAACTACAGATCAAACTTGGGGTTCCACATTCTCTTCAACAATCTTTGGATCTTGAAAAAGTCAAGTCCGTCTTCCCATAGTGAGTGATGAAGTATTTTAAGTTTTACTATTTTCTTTTTGGGAAAAACGCAGAGCTCTCTGTCTTGTTAGCACCTAACATTGGGTATGCAGTTAGACTTGTTAGATGATATATAATTAGATTTACCTACACCCACTAGCTTAAACTTTTGGATCAATTGGCTGCAGTGTTCTTGATACAAAAGCACAAATGAGCCTTTATAAACCTAACGACTGGAGGGATAAGTTAAACTACTAACTCAACCATCTTAACAAAATAACCGAGCAGAGGGAGAGGGGAGGAAAAGTAACTTAGGTACAAAAGCAAGTGATGCAAGTCAAACCCAATGGATGCTGTACAAAGATTTCTCGAGGCTGCTGAGCTGTAGAAGGCTAATGAGATTAAGATGCAGCCTTGTTTAGTGGCTTGGTTTCACATCCCCCCAAACTCGTGGGTGTTTCAATCACTCCAAGCTTCTTGCTTCAAGGTGAAGATTGCTTAAAACGTTTGTCCTTTTATGGCAAATAAGGTTTGCAGCTGCAGTATTGACACTATTGCTAATCACATCAGCTAAAGTTTACACGCTGATTCTGCACTTGATTTGAATACAAAATTCTGTTTCTTGGGCTCCCATGAAATTAGATTTTCACTTAGAAAGACTTACTATGAATATTACAAGGCTTTGTATAGAGACCGATTTTCTATACCTCTTTCAAGTATTCAAGGATTTTTCTTGCCCTTTGCCAAGGACGAGTGACCAGGCTTTGCAAGTATTGGCTGGGTTTCCTGCATGATAAGTTGTGCAGAGTCCCCCTATCGCACTGAAAATTATTAGATAACTTTTCAATCGATTTCTGTAAATTTTGATTCCTTGCGTATTGACAAGCTTCCACCTCATTATAGGTTAATTGAGATGTTTCTTTTCTTTCTTCCACCACAAATATGCATTTTAATTCATGAGGATCAAGGGAGAAAGTCAGAACAAAATCTGTAAGGAATGCTTTTATCCTCACTTTTGCTGTAAAACTTTCTACACTTAGACCTAACTGACTTGATCACTTGAATCTTGGAGGAGTTTGACAGCAAAGGGATTGAGGCTGTGACTATTCTCTGATAGTGGGGTTGGATGATATAATGGAGAGCTTACTAGGGTTTTCTTTTTATTAATAATTTTTTTATAATTTTTTAAATCTAGGGCCATAGGCACTCATACGACATTTCTCAGTTTTAAAAGACTAGATGGATGCTAGATATTTAGGTCATTTATTTATTTTAAAATTTAGGCTCTGGCGTAAAAGCTGTCTCTGGCATTGATCTGTGGTAGGCGTGTGCTTAGCCTCTAATCCAGCTGTAGATTGTAATGGAGACGATTCAGTCTGCGATTGAGATCCTTTTACAATTATGGCATGATTTTCGAATTATGTTAATCTATTTGCTTAATGCTTCTTTCTTTTTCACGTAGATTTCATGTCTCAAGTTACTTACCTTGACTTTACTTTAACCACCACAAGATCCTTCAATTGTTTTCAATGTTCTGGGCTACTTATACTGCAACCTCCAGAGTGATTGGACTAAACGACCAAGGAGAAGTTGAGCATTAGTTTAGTAACTCACTTCGTCAATTTGGCTCCAAAGTTTGTTTTTCTGTGTGGATGTTCCTATTTGAGTATCAATTCATAATTAACTAGCCTATTGCTCGCTTGACTGTTGGTCTTCCATTTCGATTTAGTATTGACTGGCAGTACCTTTCAATGATGATAGTAAACTCCTCCAAACTATCCTCTTCAAAGTTTATTGAATCTTTCCATAATTTGATCGACTGCAGTGGAAAAATTTTGAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGTGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGACGACTGTTACATAGTAAATGCTGCTGTATATGTTGGCTACTAATTTTCGTTGCAACATTCCCCTTCGAGGATCTTGGGGTTACGCGTTGTAGACTGCTAATCAATGTAAAACCATGCATGCTCCAGGTACTTAGTCATCTATGATTGTAATTATACAGTTAGCTAAGCTTGCCGTATACATTGACATTTCAGTTTCCTTGAGAATATCGTGACAACCACATGGTTCTTTCCTATCTGGATTAAGCGCTTGATTTTAATTTTTTATGTGATTCAACATTCTGTAATTTTCTGTTAGAACTCATATTTTAGTTATCAGCATCTATGATCATGAAATGAACTCTCCATATCCAGTTCGTGGAATGATCTTTGAGAACGTGAAGGAGTTATATCAGGTCGATCATGTGTGTTTATTTTTCTGGTTTCATGTAGTTCCATATGTGTGAGGATTGGTGGCCTATAAGATCTGCACTTAGCTCAATAATATGATTCTTGGAAAATATTGAATTTTTCTGAAAGCCAAACTCAAATTCAATTGGACCCATCTAATATAGCATGTTATCCAATTTAATTTCAAACAGCTATCTTCATTCCATGTCTCACCAGTCACCAGTATTCTTTCTTTCCTTGTCGATTTGAAACTATTTTCAGAAAATCCAACAACTAAAATACTTTATACAATTGCTTTGTTGCCATTACATTAATTTTAGTACAATTGCTTTGTTGCATTACATTTCTTGCTTCCAATTACCGTTAAGGTGGTTAATCAAATGAATGAAGTTCTATCATCTAACACGCCCTTTGAGGAATCGCAGAGACGAAAAGAGCTTCAAGTGTTTCGCGGTTGGCCTTCACATGGTGAAAGCTGCGTAGAGAAGCTCATTCCAAGTGTCGGGCAAACCGGGAAGGCACCAATGGCTGCAATCTCTCCCATGCTCGCCACTGTAAGTAGAGGGATGAGCATCTTTCCGCAGTTGTGACAACGTTGTAATGTCCAGCAAGAAAACTGGCTTCCTCATTCTACTCAGCACTCTCTTCACAATTTCTGCAGCGGGGGGTGTCCCTGCTGGATACAGTGACCCCGAGAGTGGTACACTTTCTCCGTTGCAACTCCTCTTTGGTTGGTTCCAATCCTTTCCCCTGATAAGGTAGAAACTTAAGATTTTAGAGTTAAGAAGAAAATGCAAAGTCTTATTCCTATATTATGCAGATAATTAGTTTTCTGGTCTGAGAATTACTCCTCAACGAGAAAATAGGTACAAGAAAAATAAGAATAGTAATGCATTAAATTGAGCTGGACAAAATTTGGACAACTTATTTTCGTCGGCAGACCAGTTAAAATAATTTTTTGTCCTCGAACTGCACGTCAATTTCCACTTTCGTATGTATAGTTTGACCAATTTTATCGCTACCAACTACCTATGATAAAATTACAAAAGAAAATATAAAATTTACTGTGAATTTTATGATGAGGGTATCGATTATTAAAGGAATTAATGTCACAGCATCCGACATGGATACGTGACAATGCTGCCTTCTCCGTGGACAGAAGTGTTTATAAATGTTCTGAGCTTGCCAAAATGCTGGAGAAGTATTAAAATGGATACATAGCCAAATGACGAAAATTTTACTTTAACCTCTCGTGGTGTGGGGATATATATATATATATATATATATCACAACTTGGAAGGGTGGGGTCGGGATTCACACCTCGTCCTTAACCCAGTAGAGGAAAAAACTTGTTTTCTTGTCTTTATAGAAATGAAGATTTATCAAATATATATTTTGAAAGTTTTAAAGTTTAGAAAAAATTACTTTGATAGAAGAAGGAATGGCAGCCATTGATCTGTACTTACTCATAATGAGTGGGGGAGATTCC

mRNA sequence

ATGACAAGCTCCATACTTCTAAATCTGCAATTTCTTTCGATAACTGATTCTAGGTTTCGTTCTTACTCTCTTTCCAATCATCTTTCTTCATCTCCGCATTTGATCTGCTCTCTTACACGCCCTCGAATTTCTCGCCTTATCAAAGTTACTGCTGTATCCTCCATGGAGGTCGAGCAAGGTGGAGAATCTGCACCTGTTGACAGCACAGTTCCGCCCATGAAGCTCTTGTTCGTTGAAATGGGTGTTGGCTACGATCAACACGGCCAAGACGTCACGGCTGCTGCAATGCGAGCCTGCAGGGATGCAATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCTCATTTGGAGAGATGAAACTACAGATCAAACTTGGGGTTCCACATTCTCTTCAACAATCTTTGGATCTTGAAAAAGTCAAGTCCGTCTTCCCATATGGAAAAATTTTGAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGTGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGACGACTGTTACATAGTAAATGCTGCTGTATATGTTGGCTACTAA

Coding sequence (CDS)

ATGACAAGCTCCATACTTCTAAATCTGCAATTTCTTTCGATAACTGATTCTAGGTTTCGTTCTTACTCTCTTTCCAATCATCTTTCTTCATCTCCGCATTTGATCTGCTCTCTTACACGCCCTCGAATTTCTCGCCTTATCAAAGTTACTGCTGTATCCTCCATGGAGGTCGAGCAAGGTGGAGAATCTGCACCTGTTGACAGCACAGTTCCGCCCATGAAGCTCTTGTTCGTTGAAATGGGTGTTGGCTACGATCAACACGGCCAAGACGTCACGGCTGCTGCAATGCGAGCCTGCAGGGATGCAATCTCTTCCAATTCGATTCCAGCATTCCGTAGAGGTTCCATTCCTGGAGTCTCATTTGGAGAGATGAAACTACAGATCAAACTTGGGGTTCCACATTCTCTTCAACAATCTTTGGATCTTGAAAAAGTCAAGTCCGTCTTCCCATATGGAAAAATTTTGAATGTTGAGGTCGTCGATGGTGGCTTAATATGCTCCAGTGGTGTGCATGTGGAAGAAATGGGAGACAAAAATGACGACTGTTACATAGTAAATGCTGCTGTATATGTTGGCTACTAA

Protein sequence

MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY*
Homology
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BLAST of Csa6G519490 vs. TrEMBL
Match: A0A0A0KNJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519490 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 9.0e-103
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60
           MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG
Sbjct: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60

Query: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120
           GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS
Sbjct: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120

Query: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180
           FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND
Sbjct: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180

Query: 181 DCYIVNAAVYVGY 194
           DCYIVNAAVYVGY
Sbjct: 181 DCYIVNAAVYVGY 193

[Close]
BLAST of Csa6G519490 vs. TrEMBL
Match: M5WHV9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011813mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-64
Identity = 136/200 (68.00%), Postives = 158/200 (79.00%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLT-------RPRISRLIKVTAVS 60
           MT+ + LNL  LS + + F S++  N+ S + HL+ +LT        PR SR IK ++ +
Sbjct: 1   MTACLFLNLP-LSSSSAAFTSHTNKNYPSLASHLLLTLTPNQSFLRAPRFSRQIKASS-A 60

Query: 61  SMEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRR 120
           SME +Q         + PPMKLLFVEMGVGYDQHGQDVTAA+MRACRDAISSNSIPAFRR
Sbjct: 61  SMEAQQSETGV----STPPMKLLFVEMGVGYDQHGQDVTAASMRACRDAISSNSIPAFRR 120

Query: 121 GSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVE 180
           GSIPGV+F EMKL+IKLGVPH LQ SLD+E+VKSVFPYGKI+ VEVVDGGLICSSGV VE
Sbjct: 121 GSIPGVTFEEMKLEIKLGVPHLLQPSLDVERVKSVFPYGKIVKVEVVDGGLICSSGVCVE 180

Query: 181 EMGDKNDDCYIVNAAVYVGY 194
           EMGDKNDDCYIVNAAVY+GY
Sbjct: 181 EMGDKNDDCYIVNAAVYIGY 194

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BLAST of Csa6G519490 vs. TrEMBL
Match: A0A0B0N650_GOSAR (Tig OS=Gossypium arboreum GN=F383_33357 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-63
Identity = 126/155 (81.29%), Postives = 139/155 (89.68%), Query Frame = 1 

Query: 40  RPRISRLIKVTAVSSMEVEQGGESAPVD-STVPPMKLLFVEMGVGYDQHGQDVTAAAMRA 99
           RPR   LI+ TA  +ME +Q   ++  D S+ PPMKLLFVEMGVGYDQHGQD+T+AAMRA
Sbjct: 44  RPRFQLLIRATA--AMETDQSAVTSTTDNSSNPPMKLLFVEMGVGYDQHGQDITSAAMRA 103

Query: 100 CRDAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVE 159
           CRDAISSNSIPAFRRGSIPGVSF +MKLQIKLGVPHSLQ SLD+E+VKSVFPYGKILNVE
Sbjct: 104 CRDAISSNSIPAFRRGSIPGVSFEQMKLQIKLGVPHSLQHSLDIERVKSVFPYGKILNVE 163

Query: 160 VVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY 194
           VVDGGL+CSSGV+VEEMGDKNDDCYIVNAAVYVGY
Sbjct: 164 VVDGGLVCSSGVYVEEMGDKNDDCYIVNAAVYVGY 196

[Close]
BLAST of Csa6G519490 vs. TrEMBL
Match: A0A0D2UFI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G158600 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-62
Identity = 125/155 (80.65%), Postives = 137/155 (88.39%), Query Frame = 1 

Query: 40  RPRISRLIKVTAVSSMEVEQGG-ESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRA 99
           RPR   LI+ TA  +ME +Q    S   +ST PPM+LLFVEMGVGYDQHGQD+T+AAMRA
Sbjct: 44  RPRFQLLIRATA--AMETDQSAVTSTTANSTNPPMELLFVEMGVGYDQHGQDITSAAMRA 103

Query: 100 CRDAISSNSIPAFRRGSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVE 159
           CRDAISSNSIPAFRRGSIPGVSF +MKL IKLGVPHSLQ SLD+E+VKSVFPYGKILNVE
Sbjct: 104 CRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQHSLDIERVKSVFPYGKILNVE 163

Query: 160 VVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYVGY 194
           VVDGGL+CSSGV+VEEMGDKNDDCYIVNAAVYVGY
Sbjct: 164 VVDGGLVCSSGVYVEEMGDKNDDCYIVNAAVYVGY 196

[Close]
BLAST of Csa6G519490 vs. TrEMBL
Match: V4UEY5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016472mg PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 135/195 (69.23%), Postives = 150/195 (76.92%), Query Frame = 1 

Query: 4   SILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLT----RPRISRLIKVTAVSS-MEVE 63
           S LLNL   ++  +      L ++   SP  + S +     PR    IK  A ++ ME E
Sbjct: 46  SWLLNLPSTALKSNHPSVNILKSNTLYSPDRLVSGSYLRPSPRFCGQIKAPATAAAMEAE 105

Query: 64  QGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPG 123
             G +A    + PPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPG
Sbjct: 106 PSGGTATNSISNPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPG 165

Query: 124 VSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDK 183
           VSF +MKL IKLGVPHSLQQ LD+E+VKSVFPYGKIL+VEVVDGGLICSSGVHVEEMGDK
Sbjct: 166 VSFEQMKLLIKLGVPHSLQQLLDIERVKSVFPYGKILDVEVVDGGLICSSGVHVEEMGDK 225

Query: 184 NDDCYIVNAAVYVGY 194
           NDDCYIVNAAVYVGY
Sbjct: 226 NDDCYIVNAAVYVGY 240

[Close]
BLAST of Csa6G519490 vs. TAIR10
Match: AT1G29040.1 (AT1G29040.1 unknown protein)

HSP 1 Score: 235.3 bits (599), Expect = 3.1e-62
Identity = 127/182 (69.78%), Postives = 141/182 (77.47%), Query Frame = 1 

Query: 12  LSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQGGESAPVDSTVP 71
           L+I+ SR +  S  +   S  H       P+ISR IKV A S+ME      +  V +   
Sbjct: 25  LTISSSRPKFLSSRSKQFSLDHF------PQISRPIKVIARSAMETTAETITGGVPNNT- 84

Query: 72  PMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFGEMKLQIKLG 131
            MKLLFVEMGVGYDQHGQDVT+AAM+AC++AISSNSIPAFRRGSIPGVSFGEMKLQIKLG
Sbjct: 85  -MKLLFVEMGVGYDQHGQDVTSAAMKACKNAISSNSIPAFRRGSIPGVSFGEMKLQIKLG 144

Query: 132 VPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKNDDCYIVNAAVYV 191
           VPHSL Q LDL+KVKS+FPYGKI+NVEVVDGGLICSSGV VEEMGD N+DCYIVN AVYV
Sbjct: 145 VPHSLHQQLDLDKVKSIFPYGKIVNVEVVDGGLICSSGVLVEEMGDTNEDCYIVNVAVYV 198

Query: 192 GY 194
           GY
Sbjct: 205 GY 198

[Close]
BLAST of Csa6G519490 vs. NCBI nr
Match: gi|449433764|ref|XP_004134667.1| (PREDICTED: uncharacterized protein LOC101216458 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60
           MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG
Sbjct: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60

Query: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120
           GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS
Sbjct: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120

Query: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180
           FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND
Sbjct: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180

Query: 181 DCYIVNAAVYVGY 194
           DCYIVNAAVYVGY
Sbjct: 181 DCYIVNAAVYVGY 193

[Close]
BLAST of Csa6G519490 vs. NCBI nr
Match: gi|659078490|ref|XP_008439752.1| (PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 7.8e-100
Identity = 186/193 (96.37%), Postives = 189/193 (97.93%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60
           MT SILLNLQFLS+TDSRFRSY  SNHLSS PHLICSLTRPRISRLIKVTAVSSMEVEQG
Sbjct: 1   MTGSILLNLQFLSLTDSRFRSYPFSNHLSSFPHLICSLTRPRISRLIKVTAVSSMEVEQG 60

Query: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120
           GESAPVDSTVPPMKLLFVEMGVGYDQHGQD+TAAAMRACRDAISSNSIPAFRRGSIPGVS
Sbjct: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVS 120

Query: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180
           FGEMKLQIKLGVPHSLQQSLD+EKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND
Sbjct: 121 FGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEEMGDKND 180

Query: 181 DCYIVNAAVYVGY 194
           DCYIVNAAVYVGY
Sbjct: 181 DCYIVNAAVYVGY 193

[Close]
BLAST of Csa6G519490 vs. NCBI nr
Match: gi|659078500|ref|XP_008439754.1| (PREDICTED: uncharacterized protein LOC103484457 isoform X2 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 3.6e-73
Identity = 143/150 (95.33%), Postives = 146/150 (97.33%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLTRPRISRLIKVTAVSSMEVEQG 60
           MT SILLNLQFLS+TDSRFRSY  SNHLSS PHLICSLTRPRISRLIKVTAVSSMEVEQG
Sbjct: 1   MTGSILLNLQFLSLTDSRFRSYPFSNHLSSFPHLICSLTRPRISRLIKVTAVSSMEVEQG 60

Query: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVS 120
           GESAPVDSTVPPMKLLFVEMGVGYDQHGQD+TAAAMRACRDAISSNSIPAFRRGSIPGVS
Sbjct: 61  GESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRGSIPGVS 120

Query: 121 FGEMKLQIKLGVPHSLQQSLDLEKVKSVFP 151
           FGEMKLQIKLGVPHSLQQSLD+EKVKSVFP
Sbjct: 121 FGEMKLQIKLGVPHSLQQSLDIEKVKSVFP 150

[Close]
BLAST of Csa6G519490 vs. NCBI nr
Match: gi|659078502|ref|XP_008439755.1| (PREDICTED: uncharacterized protein LOC103484457 isoform X3 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 4.0e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1 

Query: 55  MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRG 114
           MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQD+TAAAMRACRDAISSNSIPAFRRG
Sbjct: 1   MEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDITAAAMRACRDAISSNSIPAFRRG 60

Query: 115 SIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 174
           SIPGVSFGEMKLQIKLGVPHSLQQSLD+EKVKSVFPYGKILNVEVVDGGLICSSGVHVEE
Sbjct: 61  SIPGVSFGEMKLQIKLGVPHSLQQSLDIEKVKSVFPYGKILNVEVVDGGLICSSGVHVEE 120

Query: 175 MGDKNDDCYIVNAAVYVGY 194
           MGDKNDDCYIVNAAVYVGY
Sbjct: 121 MGDKNDDCYIVNAAVYVGY 139

[Close]
BLAST of Csa6G519490 vs. NCBI nr
Match: gi|595874392|ref|XP_007212105.1| (hypothetical protein PRUPE_ppa011813mg [Prunus persica])

HSP 1 Score: 253.1 bits (645), Expect = 4.0e-64
Identity = 136/200 (68.00%), Postives = 158/200 (79.00%), Query Frame = 1 

Query: 1   MTSSILLNLQFLSITDSRFRSYSLSNHLSSSPHLICSLT-------RPRISRLIKVTAVS 60
           MT+ + LNL  LS + + F S++  N+ S + HL+ +LT        PR SR IK ++ +
Sbjct: 1   MTACLFLNLP-LSSSSAAFTSHTNKNYPSLASHLLLTLTPNQSFLRAPRFSRQIKASS-A 60

Query: 61  SMEVEQGGESAPVDSTVPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRR 120
           SME +Q         + PPMKLLFVEMGVGYDQHGQDVTAA+MRACRDAISSNSIPAFRR
Sbjct: 61  SMEAQQSETGV----STPPMKLLFVEMGVGYDQHGQDVTAASMRACRDAISSNSIPAFRR 120

Query: 121 GSIPGVSFGEMKLQIKLGVPHSLQQSLDLEKVKSVFPYGKILNVEVVDGGLICSSGVHVE 180
           GSIPGV+F EMKL+IKLGVPH LQ SLD+E+VKSVFPYGKI+ VEVVDGGLICSSGV VE
Sbjct: 121 GSIPGVTFEEMKLEIKLGVPHLLQPSLDVERVKSVFPYGKIVKVEVVDGGLICSSGVCVE 180

Query: 181 EMGDKNDDCYIVNAAVYVGY 194
           EMGDKNDDCYIVNAAVY+GY
Sbjct: 181 EMGDKNDDCYIVNAAVYIGY 194

The following BLAST results are available for this feature:
BLAST of Csa6G519490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNJ4_CUCSA9.0e-103100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519490 PE=4 SV=1[more]
M5WHV9_PRUPE2.8e-6468.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011813mg PE=4 SV=1[more]
A0A0B0N650_GOSAR1.1e-6381.29Tig OS=Gossypium arboreum GN=F383_33357 PE=4 SV=1[more]
A0A0D2UFI9_GOSRA1.2e-6280.65Uncharacterized protein OS=Gossypium raimondii GN=B456_010G158600 PE=4 SV=1[more]
V4UEY5_9ROSI1.5e-6269.23Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016472mg PE=4 SV=1[more]
BLAST of Csa6G519490 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G29040.13.1e-6269.78 unknown protein[more]
BLAST of Csa6G519490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433764|ref|XP_004134667.1|1.3e-102100.00PREDICTED: uncharacterized protein LOC101216458 [Cucumis sativus][more]
gi|659078490|ref|XP_008439752.1|7.8e-10096.37PREDICTED: uncharacterized protein LOC103484457 isoform X1 [Cucumis melo][more]
gi|659078500|ref|XP_008439754.1|3.6e-7395.33PREDICTED: uncharacterized protein LOC103484457 isoform X2 [Cucumis melo][more]
gi|659078502|ref|XP_008439755.1|4.0e-7298.56PREDICTED: uncharacterized protein LOC103484457 isoform X3 [Cucumis melo][more]
gi|595874392|ref|XP_007212105.1|4.0e-6468.00hypothetical protein PRUPE_ppa011813mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011719CHP02058
IPR018316Tubulin/FtsZ_2-layer-sand-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
cellular_component GO:0005773 vacuole
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU097903cucumber EST collection version 3.0transcribed_cluster
CU127233cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G519490.1Csa6G519490.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU097903CU097903transcribed_cluster
CU127233CU127233transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011719Conserved hypothetical protein CHP02058PFAMPF09585Lin0512_famcoord: 76..191
score: 8.1
IPR011719Conserved hypothetical protein CHP02058TIGRFAMsTIGR02058TIGR02058coord: 74..193
score: 1.9
IPR018316Tubulin/FtsZ, 2-layer sandwich domainGENE3DG3DSA:3.30.1330.20coord: 73..193
score: 1.4
NoneNo IPR availablePANTHERPTHR34784FAMILY NOT NAMEDcoord: 1..193
score: 4.6
NoneNo IPR availablePANTHERPTHR34784:SF1SUBFAMILY NOT NAMEDcoord: 1..193
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G519490Cla009684Watermelon (97103) v1cuwmB500
Csa6G519490MELO3C007220Melon (DHL92) v3.5.1cumeB507
Csa6G519490ClCG01G023650Watermelon (Charleston Gray)cuwcgB432
Csa6G519490MELO3C007220.2Melon (DHL92) v3.6.1cumedB486
Csa6G519490Cla97C01G023590Watermelon (97103) v2cuwmbB412
Csa6G519490Bhi03G000236Wax gourdcuwgoB628
Csa6G519490CSPI06G35300Wild cucumber (PI 183967)cpicuB313
Csa6G519490Cucsa.046880Cucumber (Gy14) v1cgycuB027
Csa6G519490Cp4.1LG10g05310Cucurbita pepo (Zucchini)cpecuB087
Csa6G519490Carg15337Silver-seed gourdcarcuB0578
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G519490Cucumber (Gy14) v2cgybcuB043
Csa6G519490Cucumber (Gy14) v2cgybcuB281
Csa6G519490Melon (DHL92) v3.6.1cumedB438
Csa6G519490Silver-seed gourdcarcuB0558
Csa6G519490Silver-seed gourdcarcuB0816
Csa6G519490Watermelon (97103) v2cuwmbB453
Csa6G519490Wax gourdcuwgoB637
Csa6G519490Cucumber (Chinese Long) v2cucuB038
Csa6G519490Cucumber (Gy14) v1cgycuB316
Csa6G519490Cucurbita maxima (Rimu)cmacuB229
Csa6G519490Cucurbita maxima (Rimu)cmacuB422
Csa6G519490Cucurbita maxima (Rimu)cmacuB526
Csa6G519490Cucurbita maxima (Rimu)cmacuB678
Csa6G519490Cucurbita maxima (Rimu)cmacuB877
Csa6G519490Cucurbita moschata (Rifu)cmocuB215
Csa6G519490Cucurbita moschata (Rifu)cmocuB412
Csa6G519490Cucurbita moschata (Rifu)cmocuB667
Csa6G519490Cucurbita moschata (Rifu)cmocuB865
Csa6G519490Melon (DHL92) v3.5.1cumeB458
Csa6G519490Watermelon (Charleston Gray)cuwcgB462
Csa6G519490Watermelon (97103) v1cuwmB480
Csa6G519490Cucurbita pepo (Zucchini)cpecuB051
Csa6G519490Cucurbita pepo (Zucchini)cpecuB254
Csa6G519490Cucurbita pepo (Zucchini)cpecuB503
Csa6G519490Cucurbita pepo (Zucchini)cpecuB525
Csa6G519490Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G519490Bottle gourd (USVL1VR-Ls)culsiB438