Csa5G647540 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G647540
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Nematode resistance-like protein
Location	Chr5 : 27427655 .. 27429635 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTAGAGTTTTGTGGAGCTCGTTTAGTTTACCAGCAAAATGTTGAGGGACTTATTCACACAATTATGAATTGCATAGAGGAGAGTGGTGATGAGCTTTATGAATATTATAACCAACAAATTGTGGAATCTCATTTAAACTTGATAAATGCACATTGGTATACTATCTCATTCCGTCGAAATAACTCTGTGAAGAATCAACCATCAACTGCTGCTTCAACTTGTACTGCTTCAAGCCTTTCAGTTGAGCACCTTTTATATGGAAGTTTCCCACACCCATTCTTCCATAAGTCCTTACAGGTATATCTTTCTCTCTATAGCTTTGTCTTTTATATCTGTTGAGTAATGGACTTTAGTATATTTATCATGTTTTGTTCTCTAGACTTTCAAAAGAATTTACTGGTTCATCCCAAACTCGGAACTACATCTAGTATTTTGCAACTGCAGGCTCTACTAAGATGGAGATTGAAAAGAAACCCTCGAACACGCTTACAAATCTCTCTCTCCAAATACTCCAACCAAAGCTATTTGGATCCAGTTCTACCATTCGACATCTTGGAATAAAATAAGAGAAACCCTTTCCAAAACAGAAAAATACATGACTGTATTTTGCTTAGTATCATTCTAAAATACCGAAGAATAAAAACATCAATGTTCTTAGTTTTAATTCTTCTTCAGCAACAAAATCGATCACGGCCCACTTATATTTTTCCTTAAGAAACCTCCTATAGAATAAAATGTCGCCAGATGGACGTTGAGAAAGAAAAATTTTTCTCCACATAAAATTTATTAAATCTTAAATCTTAACTTGTTATAGAATATTATAATACATACAAGGAAAAGATTCAAGACTAGGATCTTCTAGGGGAAGTAGAGATACCTTGTAAAGTTTGTAACTTCGTATCACCAACATTTAGGTCCATTCTTGTGCGTAAGGTGAACTTCCACGATAAGTTTGTATCACCAAAATTTTCTACTTGAATGGCAAGTTTATTCATCCATTGCACCTTTTCATTTTCTGTTTTTCTCTCTTTGTCAATCAAACGTTGAGATTTTGATTATTGCTTAACAACATTTATTTTTTCTATTGAATTCATTCTCTTCGGCATCTGTCTTTTTTCTTCCATAAAACATAGATATTATTTATTTATCGTTAGAATGCCTTGAGTTTTTCGGAGTGTATTCTTCTTACACTCCGAATGACCAAGCATGAGTTATCCTATATAAAATCTTCTAAACTTATTGGCACCTTTGTAATATGTATTATCTGATATCTCTCTAACAATAAATTGCTTTCTTGCTAATAGACGTAGCTAACACACTAGTATTGAATCACGTAAATCTCTATATAGATTTCTTCTTGTTCTTATGCCTGTTATTTTATTTCTATTGTAACATTTACATTATTGATTTCATATTATTACAGGAACGATTTAGAAGTAAGTTTGATCTGCTTCTACATGGAGATAAGATCCCAAAATTTTTCAGCAATCAAAGCAAAGGAAACATGACAGAAATAAAGTTACCACAATATTTGGAAAAATTTCGAGAGAGTATAGGTGTTGCTGTGTGTGCTCTTGTGGTTGTGGACAAGAAAAGAAGAAAACTAAATGAGATTATTCCAGAACGAGAGAGGTATACAAAAGTTGTGGATCTTATATGTAAATTCAAAGTTGACTCGTATCAAATTATGCCAGAGCACTGTCACTTCACATCCCAACAAAAACTGTTGAGTGAATATGCTTCACAATTCCTTTGGCTCTCTTACATTCCCCTTCATGGATTTAATATCAATTGGCATTATTGCACCCAGTTTGAAATTGCACTTGAAACTAGCTGTGATGAGCTATTTGGAGTGAAGAATTGTGGTCTTCATCTCATACATAAGCATGAAAGGATGATGATTGATAAGATGGTAATGGAGTCAACTGTTCCATCATCCACTAGCCACAAAGGAAAGGAACCTCAAATTCATTGA

mRNA sequence

ATGCGAGTAGAGTTTTGTGGAGCTCGTTTAGTTTACCAGCAAAATGTTGAGGGACTTATTCACACAATTATGAATTGCATAGAGGAGAGTGGTGATGAGCTTTATGAATATTATAACCAACAAATTGTGGAATCTCATTTAAACTTGATAAATGCACATTGGTATACTATCTCATTCCGTCGAAATAACTCTGTGAAGAATCAACCATCAACTGCTGCTTCAACTTGTACTGCTTCAAGCCTTTCAGTTGAGCACCTTTTATATGGAAGTTTCCCACACCCATTCTTCCATAAGTCCTTACAGGAACGATTTAGAAGTAAGTTTGATCTGCTTCTACATGGAGATAAGATCCCAAAATTTTTCAGCAATCAAAGCAAAGGAAACATGACAGAAATAAAGTTACCACAATATTTGGAAAAATTTCGAGAGAGTATAGGTGTTGCTGTGTGTGCTCTTGTGGTTGTGGACAAGAAAAGAAGAAAACTAAATGAGATTATTCCAGAACGAGAGAGGTATACAAAAGTTGTGGATCTTATATGTAAATTCAAAGTTGACTCGTATCAAATTATGCCAGAGCACTGTCACTTCACATCCCAACAAAAACTGTTGAGTGAATATGCTTCACAATTCCTTTGGCTCTCTTACATTCCCCTTCATGGATTTAATATCAATTGGCATTATTGCACCCAGTTTGAAATTGCACTTGAAACTAGCTGTGATGAGCTATTTGGAGTGAAGAATTGTGGTCTTCATCTCATACATAAGCATGAAAGGATGATGATTGATAAGATGGTAATGGAGTCAACTGTTCCATCATCCACTAGCCACAAAGGAAAGGAACCTCAAATTCATTGA

Coding sequence (CDS)

ATGCGAGTAGAGTTTTGTGGAGCTCGTTTAGTTTACCAGCAAAATGTTGAGGGACTTATTCACACAATTATGAATTGCATAGAGGAGAGTGGTGATGAGCTTTATGAATATTATAACCAACAAATTGTGGAATCTCATTTAAACTTGATAAATGCACATTGGTATACTATCTCATTCCGTCGAAATAACTCTGTGAAGAATCAACCATCAACTGCTGCTTCAACTTGTACTGCTTCAAGCCTTTCAGTTGAGCACCTTTTATATGGAAGTTTCCCACACCCATTCTTCCATAAGTCCTTACAGGAACGATTTAGAAGTAAGTTTGATCTGCTTCTACATGGAGATAAGATCCCAAAATTTTTCAGCAATCAAAGCAAAGGAAACATGACAGAAATAAAGTTACCACAATATTTGGAAAAATTTCGAGAGAGTATAGGTGTTGCTGTGTGTGCTCTTGTGGTTGTGGACAAGAAAAGAAGAAAACTAAATGAGATTATTCCAGAACGAGAGAGGTATACAAAAGTTGTGGATCTTATATGTAAATTCAAAGTTGACTCGTATCAAATTATGCCAGAGCACTGTCACTTCACATCCCAACAAAAACTGTTGAGTGAATATGCTTCACAATTCCTTTGGCTCTCTTACATTCCCCTTCATGGATTTAATATCAATTGGCATTATTGCACCCAGTTTGAAATTGCACTTGAAACTAGCTGTGATGAGCTATTTGGAGTGAAGAATTGTGGTCTTCATCTCATACATAAGCATGAAAGGATGATGATTGATAAGATGGTAATGGAGTCAACTGTTCCATCATCCACTAGCCACAAAGGAAAGGAACCTCAAATTCATTGA

Protein sequence

MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCDELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH*

Homology

[Close]

BLAST of Csa5G647540 vs. TrEMBL
Match: A0A0A0KW19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647540 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 1.9e-165
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR 60
           MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR
Sbjct: 1   MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR 60

Query: 61  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 120
           RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF
Sbjct: 61  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 120

Query: 121 FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC 180
           FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC
Sbjct: 121 FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC 180

Query: 181 KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 240
           KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD
Sbjct: 181 KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 240

Query: 241 ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH 285
           ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH
Sbjct: 241 ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH 284

[Close]

BLAST of Csa5G647540 vs. TrEMBL
Match: A0A0A0KSR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648120 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 78/269 (29.00%), Postives = 131/269 (48.70%), Query Frame = 1


Query: 6   CGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR----- 65
           CGARLVY+Q+VEG ++TI++ +     EL E+Y+Q  VE  L  I  H Y    +     
Sbjct: 432 CGARLVYKQDVEGFVNTIVSNVLSLPVELLEFYDQMYVEGMLRNILYHKYDPKHKQWVEE 491

Query: 66  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 125
           +N++  N    ++S  +    S+   L  S P  F  K  ++RF + FD ++     P  
Sbjct: 492 QNSNPHNSQEDSSSCSSNMERSLILQLKESIP-SFLQKDSKDRFGNTFDFVIPKRNFPPA 551

Query: 126 FSNQ-SKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLI 185
             NQ S  N T ++LP  L    + +G  VC L  ++K    +   +    R+    +LI
Sbjct: 552 LLNQLSPENPTGVQLPPSLYTNNDWLGFVVCTLFQINKHPTAILNNVCSISRH----ELI 611

Query: 186 CKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSC 245
           C+F ++   I P H H  ++ + +     QF+WL Y P H +   +   +     +E   
Sbjct: 612 CQFAIEIGLIEPLHTHGITEDRSIWLQERQFVWLYYTPRHTYGEIFRQWSSVWAVIEADT 671

Query: 246 DELFGVKNCGLHLIHKHERMMIDKMVMES 269
            +L  V  CG+ L++K +  +IDK++M +
Sbjct: 672 PDLM-VSCCGMSLVYKKDAAVIDKILMRA 694

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BLAST of Csa5G647540 vs. TrEMBL
Match: A0A0A0KXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648130 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21
Identity = 78/281 (27.76%), Postives = 136/281 (48.40%), Query Frame = 1


Query: 6    CGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRN--- 65
            CGARLVY+Q+VEGLI+TI++ +  S  E  E+ +Q  V+  L ++++  Y    + N   
Sbjct: 1369 CGARLVYKQDVEGLINTIVSNVLSSPAEFQEFCDQIYVKGMLRIVHSRKYDPEKKENGRR 1428

Query: 66   ------------NSVKNQPSTAASTCTASSLSVEHL--LYGSFPHPFFHKSLQERFRSKF 125
                        NS  + P    S+C+++   + H+  L  S P  F  K L++RF + F
Sbjct: 1429 QEFGIEERVDEQNSNAHDPQDEDSSCSSNMERISHIMQLKESIP-SFIQKDLKDRFATSF 1488

Query: 126  DLLLHGDKI-PKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIP 185
            D  +    I  + F   S  +   I+LP  L K    +G AV  +  ++K    + + + 
Sbjct: 1489 DFCIPRTNIWAELFDQLSPNSYAHIQLPPNLYKNSNWMGFAVWTVFQINKHPTAILDNVG 1548

Query: 186  ERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHY 245
               R+    +L C+  V++  I P H H   +  +   +  QF+WL Y P   +   + +
Sbjct: 1549 SVSRH----ELFCQLAVENGIIKPLHIHSIIEDTVFWLHERQFVWLYYSPRKKYGEIFRH 1608

Query: 246  CTQFEIALETSCDELFGVKNCGLHLIHKHERMMIDKMVMES 269
             +     +E    +L  VK CG+ L++K +  +IDK++ME+
Sbjct: 1609 RSDVSAIIEADTPDLM-VKGCGVQLVYKKDVELIDKILMEA 1643

[Close]

BLAST of Csa5G647540 vs. TrEMBL
Match: E6YCZ2_9ROSA (Nematode resistance-like protein OS=Prunus cerasifera GN=Ma PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-11
Identity = 75/289 (25.95%), Postives = 121/289 (41.87%), Query Frame = 1


Query: 3    VEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRN 62
            V  CG RL+Y ++ EGL  TIM+C+           NQ   E + N              
Sbjct: 1590 VHRCGLRLIYLEDEEGLKETIMHCMTS-----LSDINQGKDEQYQN-------------- 1649

Query: 63   NSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLH---GDKIP- 122
                         C A S S+      +  +P   +S +E    K++   H       P 
Sbjct: 1650 -------------CEAGSSSITGSNIVNPVNPHLERS-EEPNDKKWNFGCHTMYNSCFPS 1709

Query: 123  ----KFFSNQSKGNMTEIKLPQYLEKFRESIGVAVC-ALVVVDKKRRKLNEIIPERERYT 182
                ++F +QS G+   + LP +L +    IG+A+C +  +VD     L+ + PE   + 
Sbjct: 1710 SITLEWFGDQSSGSSIRVPLPPHLYRATNWIGLALCTSFSIVDNPTADLDNLNPEISHH- 1769

Query: 183  KVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEI 242
                LIC  + D   I P H + T+ ++        F+W+SYIP   F+   + C   E 
Sbjct: 1770 ----LICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFIWVSYIPRAWFSDQLNECDVLEA 1829

Query: 243  ALETSCDELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQ 283
            +   S  E F V  CGL L+++H+   I + ++   + S +  KGK  Q
Sbjct: 1830 SF-ASDHEAFTVHECGLRLVYQHDEEEIKQTILH-YMTSLSDKKGKNKQ 1838

[Close]

BLAST of Csa5G647540 vs. TrEMBL
Match: E6YCZ2_9ROSA (Nematode resistance-like protein OS=Prunus cerasifera GN=Ma PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-07
Identity = 69/279 (24.73%), Postives = 115/279 (41.22%), Query Frame = 1


Query: 3    VEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRN 62
            V  CG RLVYQ + E +  TI++ +    D+                          +  
Sbjct: 1802 VHECGLRLVYQHDEEEIKQTILHYMTSLSDK--------------------------KGK 1861

Query: 63   NSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKFFS 122
            N       T +S+  +S +   HL       P   K   +R  S ++         ++F 
Sbjct: 1862 NKQCPMGDTGSSSRPSSYIVKPHL--ERLGRPSDEKWDFDR-HSMYNSCFPSSITLEWFG 1921

Query: 123  NQSKGNMTEIKLPQYLEKFRESIGVAVCALV-VVDKKRRKLNEI-IPERERYTKVVDLIC 182
            +QS  +   I LP  L      IG+AVCA   V++     ++ + IP    +     LIC
Sbjct: 1922 HQSNDSSATISLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAISHH-----LIC 1981

Query: 183  KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 242
              + D   +   H + T++++ L  +   F+W+SYIP   F+   + C   E ++  S  
Sbjct: 1982 NLESDRDSLESLHDYCTTKEEFLWLHLGGFVWVSYIPRAWFSDQLNECGVLEASI-ASDH 2040

Query: 243  ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGK 280
            E F V+ CGL L+++H     D+   + T+  S   KGK
Sbjct: 2042 EAFSVQKCGLRLVYQH-----DEEEFKQTISRSQIRKGK 2040

HSP 2 Score: 59.7 bits (143), Expect = 6.7e-06
Identity = 49/178 (27.53%), Postives = 81/178 (45.51%), Query Frame = 1


Query: 107  KFDLLLHGDKIPKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCA-LVVVDKKRRKLNEI 166
            K++     ++I ++F +QS G   +I LP  L +    IG+A+CA   V+D     L  +
Sbjct: 1456 KYNSCFPPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVLDHSTIDLENL 1515

Query: 167  IPERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEY-ASQFLWLSYIPLHGFNIN 226
             PE        +L C  + D   +   H + T+ Q+    Y    F+WLSYIP   F+  
Sbjct: 1516 NPEISH-----NLTCLLETDESCLESLHGYSTNSQEFKWLYRMGGFIWLSYIPRCWFSDQ 1575

Query: 227  WHYCTQFEIALETSCDELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQ 283
                   E ++ +    L GV  CGL LI+  +   + + +M      S  ++GK+ Q
Sbjct: 1576 LKERGHLEASIGSDHGSL-GVHRCGLRLIYLEDEEGLKETIMHCMTSLSDINQGKDEQ 1627

HSP 3 Score: 35.8 bits (81), Expect = 1.0e+02
Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 1


Query: 1    MRVEFCGARLVYQQNVEGLIHTIMNCIEE 30
            + V+ CG RLVY Q+++GLI TI +C  +
Sbjct: 1324 VEVKMCGMRLVYNQDLKGLIQTISHCTND 1352

HSP 4 Score: 65.1 bits (157), Expect = 1.6e-07
Identity = 71/281 (25.27%), Postives = 112/281 (39.86%), Query Frame = 1


Query: 3    VEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRRN 62
            V  CG RLVYQ + E +  TI++ +    D+                          +  
Sbjct: 1798 VHECGLRLVYQHDEEEIKQTILHYMTSLSDK--------------------------KVK 1857

Query: 63   NSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFF--HKSLQERFRSKFDLLLHGDKIPKF 122
            N       T +S+  +S +   HL     P   F  H      F S   L        ++
Sbjct: 1858 NKQCPMGDTVSSSRPSSYIVKPHLKRLGRPSWDFDLHSIYNSCFPSSITL--------EW 1917

Query: 123  FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALV-VVDKKRRKLNEI-IPERERYTKVVDL 182
            F  QS  +   I LP  L      IG+AVCA   V++     ++ + IP    +     L
Sbjct: 1918 FGRQSNDSSATILLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAISHH-----L 1977

Query: 183  ICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETS 242
            IC  + D   +   H + T+ ++ L  +   F+W+SYIP   F+   + C   E ++  S
Sbjct: 1978 ICNLESDRDSLESLHDYCTTNEEFLWLHFGGFVWVSYIPRAWFSDQLNECGVLEASI-AS 2033

Query: 243  CDELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGK 280
              E F V+ CGL L+++H     D+   + T+  S   KGK
Sbjct: 2038 DHEAFSVQKCGLRLVYQH-----DEEEFKQTISRSQIRKGK 2033

[Close]

BLAST of Csa5G647540 vs. NCBI nr
Match: gi|700197455|gb|KGN52632.1| (hypothetical protein Csa_5G647540 [Cucumis sativus])

HSP 1 Score: 589.7 bits (1519), Expect = 2.7e-165
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR 60
           MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR
Sbjct: 1   MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR 60

Query: 61  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 120
           RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF
Sbjct: 61  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 120

Query: 121 FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC 180
           FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC
Sbjct: 121 FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC 180

Query: 181 KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 240
           KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD
Sbjct: 181 KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 240

Query: 241 ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH 285
           ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH
Sbjct: 241 ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQIH 284

[Close]

BLAST of Csa5G647540 vs. NCBI nr
Match: gi|659119228|ref|XP_008459543.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 561.2 bits (1445), Expect = 1.0e-156
Identity = 265/283 (93.64%), Postives = 276/283 (97.53%), Query Frame = 1


Query: 1    MRVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR 60
            MRVEFCGARLVYQQNVEGL+HTI+NCI ESGDELYE+YNQ IVESHL  IN HWYT+SFR
Sbjct: 1350 MRVEFCGARLVYQQNVEGLVHTILNCIAESGDELYEHYNQYIVESHLTFINTHWYTLSFR 1409

Query: 61   RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 120
            RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF
Sbjct: 1410 RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 1469

Query: 121  FSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLIC 180
            FSNQS GNMTEIKLPQYLE+FRES+G+AVCALVVVDKKRRKLNEI+PERERYTKVVDLIC
Sbjct: 1470 FSNQSGGNMTEIKLPQYLEEFRESVGLAVCALVVVDKKRRKLNEIMPERERYTKVVDLIC 1529

Query: 181  KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSCD 240
            KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFE+ALETSCD
Sbjct: 1530 KFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEVALETSCD 1589

Query: 241  ELFGVKNCGLHLIHKHERMMIDKMVMESTVPSSTSHKGKEPQI 284
            ELFGVKNCGLHLIHKHER MID+M+MESTVPSSTSHKGKEPQI
Sbjct: 1590 ELFGVKNCGLHLIHKHERTMIDRMIMESTVPSSTSHKGKEPQI 1632

[Close]

BLAST of Csa5G647540 vs. NCBI nr
Match: gi|659119238|ref|XP_008459548.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 9.0e-28
Identity = 83/288 (28.82%), Postives = 138/288 (47.92%), Query Frame = 1


Query: 2    RVEFCGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFRR 61
            +V  CGARL+YQ++++  + TI++ +      L+E+Y+   + S L+LI +  Y      
Sbjct: 1245 KVILCGARLLYQEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNSMLSLIRSQKYDPDIEE 1304

Query: 62   NNSVKN--QPSTAASTCTASSLSVEHLLYGSFP-------------HPFFHKSLQERFRS 121
            +         +   +  + SS S+E    G                H FF +SLQ R+ +
Sbjct: 1305 DEDKDEALMETRGGNYASTSSSSLESTTKGRLDDSNDYYYDLKQCLHVFFQRSLQNRYDT 1364

Query: 122  KFDLLLHGDKIPKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEII 181
             FD ++ G  +P+ FS Q + N   I+LP  L      IG  VC L+ V+K    +   +
Sbjct: 1365 AFDFIVRGHDVPQLFSRQPERNRASIELPPTLYTSNVWIGFVVCTLLYVNKNPTAIYNNL 1424

Query: 182  PERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWH 241
              R  +    DL+C+F+++   + P H H T + K L     QF+WL Y P   F     
Sbjct: 1425 GSRMPH----DLMCQFEIEQGLLKPLHIHTTMENKWLWLDERQFVWLYYTPRRTFGHILR 1484

Query: 242  YCTQFEIALETSCDELFGVKNCGLHLIHKHERMMIDKMVMESTVPSST 275
            +C+     +E    EL  V+ CG++L+H  +R  ID++++ES    ST
Sbjct: 1485 HCSYIRAIVEADSPEL-TVRRCGIYLLHNQDREKIDQILIESLPTRST 1527

[Close]

BLAST of Csa5G647540 vs. NCBI nr
Match: gi|778707827|ref|XP_011656067.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21
Identity = 78/269 (29.00%), Postives = 131/269 (48.70%), Query Frame = 1


Query: 6    CGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR----- 65
            CGARLVY+Q+VEG ++TI++ +     EL E+Y+Q  VE  L  I  H Y    +     
Sbjct: 1389 CGARLVYKQDVEGFVNTIVSNVLSLPVELLEFYDQMYVEGMLRNILYHKYDPKHKQWVEE 1448

Query: 66   RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 125
            +N++  N    ++S  +    S+   L  S P  F  K  ++RF + FD ++     P  
Sbjct: 1449 QNSNPHNSQEDSSSCSSNMERSLILQLKESIP-SFLQKDSKDRFGNTFDFVIPKRNFPPA 1508

Query: 126  FSNQ-SKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLI 185
              NQ S  N T ++LP  L    + +G  VC L  ++K    +   +    R+    +LI
Sbjct: 1509 LLNQLSPENPTGVQLPPSLYTNNDWLGFVVCTLFQINKHPTAILNNVCSISRH----ELI 1568

Query: 186  CKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSC 245
            C+F ++   I P H H  ++ + +     QF+WL Y P H +   +   +     +E   
Sbjct: 1569 CQFAIEIGLIEPLHTHGITEDRSIWLQERQFVWLYYTPRHTYGEIFRQWSSVWAVIEADT 1628

Query: 246  DELFGVKNCGLHLIHKHERMMIDKMVMES 269
             +L  V  CG+ L++K +  +IDK++M +
Sbjct: 1629 PDLM-VSCCGMSLVYKKDAAVIDKILMRA 1651

[Close]

BLAST of Csa5G647540 vs. NCBI nr
Match: gi|700197463|gb|KGN52640.1| (hypothetical protein Csa_5G648120 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21
Identity = 78/269 (29.00%), Postives = 131/269 (48.70%), Query Frame = 1


Query: 6   CGARLVYQQNVEGLIHTIMNCIEESGDELYEYYNQQIVESHLNLINAHWYTISFR----- 65
           CGARLVY+Q+VEG ++TI++ +     EL E+Y+Q  VE  L  I  H Y    +     
Sbjct: 432 CGARLVYKQDVEGFVNTIVSNVLSLPVELLEFYDQMYVEGMLRNILYHKYDPKHKQWVEE 491

Query: 66  RNNSVKNQPSTAASTCTASSLSVEHLLYGSFPHPFFHKSLQERFRSKFDLLLHGDKIPKF 125
           +N++  N    ++S  +    S+   L  S P  F  K  ++RF + FD ++     P  
Sbjct: 492 QNSNPHNSQEDSSSCSSNMERSLILQLKESIP-SFLQKDSKDRFGNTFDFVIPKRNFPPA 551

Query: 126 FSNQ-SKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEIIPERERYTKVVDLI 185
             NQ S  N T ++LP  L    + +G  VC L  ++K    +   +    R+    +LI
Sbjct: 552 LLNQLSPENPTGVQLPPSLYTNNDWLGFVVCTLFQINKHPTAILNNVCSISRH----ELI 611

Query: 186 CKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWHYCTQFEIALETSC 245
           C+F ++   I P H H  ++ + +     QF+WL Y P H +   +   +     +E   
Sbjct: 612 CQFAIEIGLIEPLHTHGITEDRSIWLQERQFVWLYYTPRHTYGEIFRQWSSVWAVIEADT 671

Query: 246 DELFGVKNCGLHLIHKHERMMIDKMVMES 269
            +L  V  CG+ L++K +  +IDK++M +
Sbjct: 672 PDLM-VSCCGMSLVYKKDAAVIDKILMRA 694

The following BLAST results are available for this feature:

BLAST of Csa5G647540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW19_CUCSA	1.9e-165	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647540 PE=4 SV=1	[more]
A0A0A0KSR4_CUCSA	1.1e-21	29.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648120 PE=4 SV=1	[more]
A0A0A0KXU7_CUCSA	4.3e-21	27.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648130 PE=4 SV=1	[more]
E6YCZ2_9ROSA	5.3e-11	25.95	Nematode resistance-like protein OS=Prunus cerasifera GN=Ma PE=4 SV=1	[more]
E6YCZ2_9ROSA	1.6e-07	24.73	Nematode resistance-like protein OS=Prunus cerasifera GN=Ma PE=4 SV=1	[more]

BLAST of Csa5G647540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700197455\|gb\|KGN52632.1\|	2.7e-165	100.00	hypothetical protein Csa_5G647540 [Cucumis sativus]	[more]
gi\|659119228\|ref\|XP_008459543.1\|	1.0e-156	93.64	PREDICTED: TMV resistance protein N-like [Cucumis melo]	[more]
gi\|659119238\|ref\|XP_008459548.1\|	9.0e-28	28.82	PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]	[more]
gi\|778707827\|ref\|XP_011656067.1\|	1.6e-21	29.00	PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus]	[more]
gi\|700197463\|gb\|KGN52640.1\|	1.6e-21	29.00	hypothetical protein Csa_5G648120 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU092028	cucumber EST collection version 3.0	transcribed_cluster
CU116012	cucumber EST collection version 3.0	transcribed_cluster
CU117605	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G647540.1	Csa5G647540.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU117605	CU117605	transcribed_cluster
CU116012	CU116012	transcribed_cluster
CU092028	CU092028	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G647540	MELO3C022151	Melon (DHL92) v3.5.1	cumeB368
Csa5G647540	ClCG08G001330	Watermelon (Charleston Gray)	cuwcgB413
Csa5G647540	MELO3C022152.2	Melon (DHL92) v3.6.1	cumedB346

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G647540	Cucurbita pepo (Zucchini)	cpecuB579
Csa5G647540	Cucurbita pepo (Zucchini)	cpecuB792
Csa5G647540	Bottle gourd (USVL1VR-Ls)	culsiB391
Csa5G647540	Bottle gourd (USVL1VR-Ls)	culsiB392
Csa5G647540	Cucumber (Gy14) v2	cgybcuB223
Csa5G647540	Melon (DHL92) v3.6.1	cumedB337
Csa5G647540	Silver-seed gourd	carcuB0183
Csa5G647540	Silver-seed gourd	carcuB0698
Csa5G647540	Watermelon (97103) v2	cuwmbB403
Csa5G647540	Wax gourd	cuwgoB461
Csa5G647540	Cucumber (Gy14) v1	cgycuB337
Csa5G647540	Cucurbita maxima (Rimu)	cmacuB029
Csa5G647540	Cucurbita maxima (Rimu)	cmacuB483
Csa5G647540	Cucurbita moschata (Rifu)	cmocuB020
Csa5G647540	Cucurbita moschata (Rifu)	cmocuB472
Csa5G647540	Melon (DHL92) v3.5.1	cumeB358
Csa5G647540	Watermelon (97103) v1	cuwmB379