Csa5G527910 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G527910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 18774098 .. 18774322 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATCATACAGTGTCCAAAACCACCAAGCATGGTCAGCCAATGCCGTATTGAGCAGCCACAAGTAGCACAAGGCATAGCTAAGTGCGCAGACATGCACATGACCATCAACAAGCGCACAACACAGCCATGCACACATGTGAATCTAGCAATGCTAACGGTCGTTACCAAATGGTGTGCACCCTTGTCAGATATGCTAGAAAATGTTGATGGTTCTAGATAA

mRNA sequence

ATGAACATCATACAGTGTCCAAAACCACCAAGCATGGTCAGCCAATGCCGTATTGAGCAGCCACAAGTAGCACAAGGCATAGCTAAGTGCGCAGACATGCACATGACCATCAACAAGCGCACAACACAGCCATGCACACATGTGAATCTAGCAATGCTAACGGTCGTTACCAAATGGTGTGCACCCTTGTCAGATATGCTAGAAAATGTTGATGGTTCTAGATAA

Coding sequence (CDS)

ATGAACATCATACAGTGTCCAAAACCACCAAGCATGGTCAGCCAATGCCGTATTGAGCAGCCACAAGTAGCACAAGGCATAGCTAAGTGCGCAGACATGCACATGACCATCAACAAGCGCACAACACAGCCATGCACACATGTGAATCTAGCAATGCTAACGGTCGTTACCAAATGGTGTGCACCCTTGTCAGATATGCTAGAAAATGTTGATGGTTCTAGATAA

Protein sequence

MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWCAPLSDMLENVDGSR*
Homology
[Close]
BLAST of Csa5G527910 vs. TrEMBL
Match: A0A0A0KP66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527910 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.7e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC 60
          MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC
Sbjct: 1  MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC 60

Query: 61 APLSDMLENVDGSR 75
          APLSDMLENVDGSR
Sbjct: 61 APLSDMLENVDGSR 74

[Close]
BLAST of Csa5G527910 vs. NCBI nr
Match: gi|700196226|gb|KGN51403.1| (hypothetical protein Csa_5G527910 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 5.2e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC 60
          MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC
Sbjct: 1  MNIIQCPKPPSMVSQCRIEQPQVAQGIAKCADMHMTINKRTTQPCTHVNLAMLTVVTKWC 60

Query: 61 APLSDMLENVDGSR 75
          APLSDMLENVDGSR
Sbjct: 61 APLSDMLENVDGSR 74

The following BLAST results are available for this feature:
BLAST of Csa5G527910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP66_CUCSA3.7e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527910 PE=4 SV=1[more]
BLAST of Csa5G527910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196226|gb|KGN51403.1|5.2e-36100.00hypothetical protein Csa_5G527910 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G527910.1Csa5G527910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G527910Watermelon (97103) v2cuwmbB364
Csa5G527910Cucumber (Gy14) v1cgycuB286
Csa5G527910Cucurbita maxima (Rimu)cmacuB759
Csa5G527910Cucurbita moschata (Rifu)cmocuB752
Csa5G527910Melon (DHL92) v3.5.1cumeB380
Csa5G527910Watermelon (Charleston Gray)cuwcgB360
Csa5G527910Watermelon (97103) v1cuwmB435
Csa5G527910Cucurbita pepo (Zucchini)cpecuB453
Csa5G527910Bottle gourd (USVL1VR-Ls)culsiB337
Csa5G527910Cucumber (Gy14) v2cgybcuB223
Csa5G527910Melon (DHL92) v3.6.1cumedB363