Csa4G011090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G011090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCcr4-associated factor, putative; contains IPR006941 (Ribonuclease CAF1), IPR012337 (Ribonuclease H-like domain)
LocationChr4 : 1647657 .. 1648445 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTATTCGTTCGACAAGTTTGGTATCATAATCTCGCCCAAGAATTGGCCATTCTCAATGACCACCTTTTCAAGTTTCCAGTGATCGTCATGGACACTGAGTTCCCTGGCTTTCTCCGTTCCACTCCCAGAGGTGCTCCCCAGGAACATCTCTACCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATGAGAATGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACCTCTCTAGTCCTACGTCAATGCAATATTTGAAGAACAACAAAGGGTTTGAATTCAAGAAACAAAGGAAAGACGGAATTCCATCGGCTGAATTCCGACGTGCATTTCTGCCAATCTTCTCTAGCAATCGAATAACCAAATGGATCACATTTCATGGTATTTACGATGTTGCTTACTTATTGAAGTTAATGATAATCAAAGCCATGCCCGAGTCCATGGTGGAATTTGCTATTATAGCTCAACGTTTCCTTGGTACAGTCAATGACCTCAAGTACATGATTGGCCATTGTGAACGTTTAATGAAGGGTGAACTCGGACTTAAGAGACTTGCCGAGTTACTTGATGTGAACGACACTGTTTTCAGTGGTGGCTCTGATAGTTTGTTGATAGCTTTGGCATATGTGAAGATGAAGAAGCTAAAACTTTCGTCGGAGAATACTGGTGGATTTTTGTATGGTTTTCAATACAGAATTAGAGGATATAAAACCTTTTGTTATCGTTATTAA

mRNA sequence

ATGAGTTTATTCGTTCGACAAGTTTGGTATCATAATCTCGCCCAAGAATTGGCCATTCTCAATGACCACCTTTTCAAGTTTCCAGTGATCGTCATGGACACTGAGTTCCCTGGCTTTCTCCGTTCCACTCCCAGAGGTGCTCCCCAGGAACATCTCTACCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATGAGAATGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACCTCTCTAGTCCTACGTCAATGCAATATTTGAAGAACAACAAAGGGTTTGAATTCAAGAAACAAAGGAAAGACGGAATTCCATCGGCTGAATTCCGACGTGCATTTCTGCCAATCTTCTCTAGCAATCGAATAACCAAATGGATCACATTTCATGGTATTTACGATGTTGCTTACTTATTGAAGTTAATGATAATCAAAGCCATGCCCGAGTCCATGGTGGAATTTGCTATTATAGCTCAACGTTTCCTTGGTACAGTCAATGACCTCAAGTACATGATTGGCCATTGTGAACGTTTAATGAAGGGTGAACTCGGACTTAAGAGACTTGCCGAGTTACTTGATGTGAACGACACTGTTTTCAGTGGTGGCTCTGATAGTTTGTTGATAGCTTTGGCATATGTGAAGATGAAGAAGCTAAAACTTTCGTCGGAGAATACTGGTGGATTTTTGTATGGTTTTCAATACAGAATTAGAGGATATAAAACCTTTTGTTATCGTTATTAA

Coding sequence (CDS)

ATGAGTTTATTCGTTCGACAAGTTTGGTATCATAATCTCGCCCAAGAATTGGCCATTCTCAATGACCACCTTTTCAAGTTTCCAGTGATCGTCATGGACACTGAGTTCCCTGGCTTTCTCCGTTCCACTCCCAGAGGTGCTCCCCAGGAACATCTCTACCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATGAGAATGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACCTCTCTAGTCCTACGTCAATGCAATATTTGAAGAACAACAAAGGGTTTGAATTCAAGAAACAAAGGAAAGACGGAATTCCATCGGCTGAATTCCGACGTGCATTTCTGCCAATCTTCTCTAGCAATCGAATAACCAAATGGATCACATTTCATGGTATTTACGATGTTGCTTACTTATTGAAGTTAATGATAATCAAAGCCATGCCCGAGTCCATGGTGGAATTTGCTATTATAGCTCAACGTTTCCTTGGTACAGTCAATGACCTCAAGTACATGATTGGCCATTGTGAACGTTTAATGAAGGGTGAACTCGGACTTAAGAGACTTGCCGAGTTACTTGATGTGAACGACACTGTTTTCAGTGGTGGCTCTGATAGTTTGTTGATAGCTTTGGCATATGTGAAGATGAAGAAGCTAAAACTTTCGTCGGAGAATACTGGTGGATTTTTGTATGGTTTTCAATACAGAATTAGAGGATATAAAACCTTTTGTTATCGTTATTAA

Protein sequence

MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY*
Homology
[Close]
BLAST of Csa4G011090 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-34
Identity = 92/264 (34.85%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDL 64
           +R+VW HNL QE+A++   +  FP + MDTEFPG +  T    P         E+ Y  L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 65  KFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQTDLSSPTSMQYLKNNK 124
           K NVN LK++QLGLTL DE  ++          W F F +F+  +D+ +  S++ L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKS- 135

Query: 125 GFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESM 184
             + +K  + G+ +  F    +   +  +++I  W+TFH  YD  YLLKL+  K +PE +
Sbjct: 136 AIDLEKNNECGVDAKRFAELLMGSGVVLNDKI-HWVTFHCGYDFGYLLKLLSGKELPEEI 195

Query: 185 VEFAIIAQRFLGTVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIA 244
            +F    ++F   V D+KY++G C  L     GL+++AELL V     S   GSDSLL  
Sbjct: 196 SDFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTL 255

Query: 245 LAYVKMKKLKLSSE--NTGGFLYG 248
             ++KMK+   +       GFL+G
Sbjct: 256 RTFIKMKEFFFTGSLLKYSGFLFG 274

[Close]
BLAST of Csa4G011090 vs. Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.9e-34
Identity = 93/267 (34.83%), Postives = 139/267 (52.06%), Query Frame = 1 

Query: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFN 60
           +++  R+VW  NL  E  ++++ +  +P I MDTEFPG + +S  R    + LY  LK N
Sbjct: 15  VTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKAN 74

Query: 61  VNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKG 120
           V+ L ++Q+GLTL D N          H G  W F F DFD   D  +P S++ L+  +G
Sbjct: 75  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR-RQG 134

Query: 121 FEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVE 180
            +F++  +DG+ S  F    +      N    W+TFH  YD  YL+K++  + +P ++ E
Sbjct: 135 IDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGE 194

Query: 181 FAIIAQRFLG-TVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIA 240
           F  + +   G  V D+K+M+  CER + G  GL R+A  L+VN  V      GSDSLL  
Sbjct: 195 FKRVMRVLFGERVYDVKHMMKFCERRLFG--GLDRVARTLEVNRAVGKCHQAGSDSLLTW 254

Query: 241 LAYVKMKKLKL---SSENTGGFLYGFQ 250
            A+ +M+ L       E   G LYG +
Sbjct: 255 HAFQRMRDLYFVQDGPEKHAGVLYGLE 278

[Close]
BLAST of Csa4G011090 vs. Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-33
Identity = 84/248 (33.87%), Postives = 134/248 (54.03%), Query Frame = 1 

Query: 6   RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKI 65
           R+VW  N+ +E+A + + L +FP+I  DTE+PG +  T   +  +  Y+ +K NV + K+
Sbjct: 10  RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKL 69

Query: 66  LQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAE 125
           +Q G TL +    +G  W   FS+F + +D  +  S+++L+ + G + +K R +G+    
Sbjct: 70  IQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRH-GLDLQKIRDEGVDM-- 129

Query: 126 FRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTV 185
           F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFA    +  G V
Sbjct: 130 FGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQV 189

Query: 186 NDLKYMIGHCERLMKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSE 245
            D K M G CE L +  LGL +LA+LL +         GSDSL+ AL ++K+K +   S 
Sbjct: 190 YDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYEDSR 249

Query: 246 NTGGFLYG 248
              G +YG
Sbjct: 250 FARGLIYG 253

[Close]
BLAST of Csa4G011090 vs. Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-32
Identity = 83/218 (38.07%), Postives = 120/218 (55.05%), Query Frame = 1 

Query: 17  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDEN 76
           ++++ D L  +  I +DTEFP  LR T + A  E  Y D+ F+V+  K++QLGLTL D N
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 77  EHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIP-SAEFRRAFLPIFS 136
             +G +W   FSDF    D  +  S+++L+ N G + +K R++GI     F   F  +  
Sbjct: 61  GRIGGTWEINFSDFGVD-DARNEKSIEFLRRN-GLDLRKIREEGIRIEGFFSEMFWMLKK 120

Query: 137 SNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCERLM 196
           + R   W+TFHG YD+AYLLK    +A+P +   F+    R LG+V DLK M G CE L 
Sbjct: 121 TRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL- 180

Query: 197 KGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKM 232
              LGL+ LA    +N   T    GS++ L A+ + K+
Sbjct: 181 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]
BLAST of Csa4G011090 vs. Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-32
Identity = 90/269 (33.46%), Postives = 140/269 (52.04%), Query Frame = 1 

Query: 3   LFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTP-----RGAPQEHLYQDLK 62
           + +R VW +NL  E  ++   +  +P I MDTEFPG +         RG P  +LY  LK
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNP-NYLYNLLK 71

Query: 63  FNVNHLKILQLGLTLMDENEHV---------GLSWVFTFSDFDEQTDLSSPTSMQYLKNN 122
            NV+ L ++Q+GLTL D + ++            W F F DFD + D  +P S++ L+ +
Sbjct: 72  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 131

Query: 123 KGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMIIKAMPESM 182
            G +F++ R++G+ S  F    +      N    W+TFH  YD  YL+K++  + +P ++
Sbjct: 132 -GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVAL 191

Query: 183 VEFAIIAQRFLG-TVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTV---FSGGSDSLL 242
            EF  + + F G  V D+K+++  CE+ + G  GL R+A  L+VN  V      GSDSLL
Sbjct: 192 REFLGLLRAFFGDRVYDVKHIMRFCEQRLYG--GLDRVARSLEVNRAVGKCHQAGSDSLL 251

Query: 243 IALAYVKMKKLKL---SSENTGGFLYGFQ 250
              A+ +M+ L      +E   G LYG +
Sbjct: 252 TWQAFQRMRDLYFVEDGAEKHAGVLYGLE 276

[Close]
BLAST of Csa4G011090 vs. TrEMBL
Match: A0A0A0KTU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011090 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 4.3e-148
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1 

Query: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV 60
           MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV
Sbjct: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV 60

Query: 61  NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG 120
           NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG
Sbjct: 61  NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG 120

Query: 121 IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT 180
           IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT
Sbjct: 121 IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT 180

Query: 181 VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN 240
           VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN
Sbjct: 181 VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN 240

Query: 241 TGGFLYGFQYRIRGYKTFCYRY 263
           TGGFLYGFQYRIRGYKTFCYRY
Sbjct: 241 TGGFLYGFQYRIRGYKTFCYRY 262

[Close]
BLAST of Csa4G011090 vs. TrEMBL
Match: A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.7e-52
Identity = 112/257 (43.58%), Postives = 163/257 (63.42%), Query Frame = 1 

Query: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLK 64
           +RQVW  N   E+A  ++ L    ++ +DTEFPGF+  +PRG+  + LY+D  FNVN  K
Sbjct: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75

Query: 65  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSA 124
           ++QLG+T  D+   +G SW F FSDFD + D  SP ++ +L++N G + KK +KDGIP A
Sbjct: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHN-GLDLKKMKKDGIPIA 135

Query: 125 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-IIKAMPESMVEFAIIAQRFLGTVND 184
            F + FLPI     I +W+TFHG+YD+ YL+K M +I  +P+SM EFA +    +G V D
Sbjct: 136 SFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195

Query: 185 LKYMIGHCERL-MKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKM-KKLKLSSE 244
           LK+M   CE L   G LGL+RL +LL++       + GSDSLL A A+++M ++  ++S+
Sbjct: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255

Query: 245 NTGGFLYGFQYRIRGYK 257
              GFLYGF   +   K
Sbjct: 256 VCNGFLYGFSETLESMK 271

[Close]
BLAST of Csa4G011090 vs. TrEMBL
Match: V4S8J5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013857mg PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.5e-48
Identity = 105/248 (42.34%), Postives = 152/248 (61.29%), Query Frame = 1 

Query: 8   VWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQ 67
           VW  N  QE    +  L +F ++ +DTEFPGF+ STPR AP   +Y +LKFNV++ KI+Q
Sbjct: 6   VWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTKIIQ 65

Query: 68  LGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFR 127
           LG+TL D+  ++G +W F FSDFD Q D     SM+ +++N G +F K R+DGIP   F 
Sbjct: 66  LGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMRSN-GLDFAKIRRDGIPQCVFV 125

Query: 128 RAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVNDLKYM 187
              L I S ++  KW+TFHG+YD+A++ KL I   +P+S   FA+ A ++  +V D+K +
Sbjct: 126 PRLLEILSKHKNLKWVTFHGLYDLAHITKLFINHPLPQSARAFAVGATKYFESVLDVKVV 185

Query: 188 IGHCERLMKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKMK-KLKLSSENTGGF 247
             +C+ LM G LGL +LA++L V       + GSDS + A  + KMK K +   +   G 
Sbjct: 186 AKYCDGLMGGNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKVFDGI 245

Query: 248 LYGFQYRI 253
           LYG   RI
Sbjct: 246 LYGMDERI 252

[Close]
BLAST of Csa4G011090 vs. TrEMBL
Match: M5XIY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023187mg PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45
Identity = 111/257 (43.19%), Postives = 152/257 (59.14%), Query Frame = 1 

Query: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLK 64
           +R VW HN  QEL+  +  L +FPVI  DTEFPGFLR TPR A ++  Y+D+KFNV  LK
Sbjct: 3   IRGVWAHNFHQELSQFDHCLHRFPVISFDTEFPGFLRDTPRDALEDQRYEDVKFNVESLK 62

Query: 65  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSA 124
           +LQLG TL D + ++G +W F  S F+E++D     S+  LK N G +F +  + GI  A
Sbjct: 63  LLQLGFTLSDAHGNIGGTWEFHLSGFNEKSDPHVVASISLLKRN-GLDFARLGQFGISVA 122

Query: 125 EFRRAFLPIFSSNR---ITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTV 184
           EF   FL +   +R      W+ FHG+YD+AYLLKL+  K +P+S+V FA       GT+
Sbjct: 123 EFVFGFLRVLRIHRGLHDLTWVCFHGLYDLAYLLKLLTQKPLPDSVVMFAKALGVVFGTI 182

Query: 185 NDLKYMIGHCERLMKGELGLKRLAELLDV--NDTVFSGGSDSLLIALAYVKMK-KLKLSS 244
            D+K+M  +C     GE+GL R+A+LLDV  +      GSDSLL A  + KM    +  +
Sbjct: 183 YDVKFMARYCRGFFGGEIGLARVAKLLDVERSGEAHQAGSDSLLTAAVFSKMNATFRSVA 242

Query: 245 ENTGGFLYGFQYRIRGY 256
             + G LYG    I  Y
Sbjct: 243 GMSQGCLYGISPTIVRY 258

[Close]
BLAST of Csa4G011090 vs. TrEMBL
Match: M5Y7U4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017181mg PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45
Identity = 111/257 (43.19%), Postives = 152/257 (59.14%), Query Frame = 1 

Query: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLK 64
           +R VW HN  QEL+  +  L +FPVI  DTEFPGFLR TPR A ++  Y+D+KFNV  LK
Sbjct: 3   IRGVWAHNFHQELSQFDHCLHRFPVISFDTEFPGFLRDTPRDALEDQRYEDVKFNVESLK 62

Query: 65  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSA 124
           +LQLG TL D + ++G +W F  S F+E++D     S+  LK N G +F +  + GI  A
Sbjct: 63  LLQLGFTLSDAHGNIGGTWEFHLSGFNEKSDPHVVASISLLKRN-GLDFARLGQFGISVA 122

Query: 125 EFRRAFLPIFSSNR---ITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTV 184
           EF   FL +   +R      W+ FHG+YD+AYLLKL+  K +P+S+V FA       GT+
Sbjct: 123 EFVFGFLRVLRIHRGLHDLTWVCFHGLYDLAYLLKLLTQKPLPDSVVMFAKALGVVFGTI 182

Query: 185 NDLKYMIGHCERLMKGELGLKRLAELLDV--NDTVFSGGSDSLLIALAYVKMK-KLKLSS 244
            D+K+M  +C     GE+GL R+A+LLDV  +      GSDSLL A  + KM    +  +
Sbjct: 183 YDVKFMARYCRGFFGGEIGLARVAKLLDVERSGEAHQAGSDSLLTAAVFSKMNATFRSVA 242

Query: 245 ENTGGFLYGFQYRIRGY 256
             + G LYG    I  Y
Sbjct: 243 GMSQGCLYGISPTIVRY 258

[Close]
BLAST of Csa4G011090 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 92/264 (34.85%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDL 64
           +R+VW HNL QE+A++   +  FP + MDTEFPG +  T    P         E+ Y  L
Sbjct: 16  IREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTL 75

Query: 65  KFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQTDLSSPTSMQYLKNNK 124
           K NVN LK++QLGLTL DE  ++          W F F +F+  +D+ +  S++ L+ + 
Sbjct: 76  KANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKS- 135

Query: 125 GFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESM 184
             + +K  + G+ +  F    +   +  +++I  W+TFH  YD  YLLKL+  K +PE +
Sbjct: 136 AIDLEKNNECGVDAKRFAELLMGSGVVLNDKI-HWVTFHCGYDFGYLLKLLSGKELPEEI 195

Query: 185 VEFAIIAQRFLGTVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIA 244
            +F    ++F   V D+KY++G C  L     GL+++AELL V     S   GSDSLL  
Sbjct: 196 SDFFDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTL 255

Query: 245 LAYVKMKKLKLSSE--NTGGFLYG 248
             ++KMK+   +       GFL+G
Sbjct: 256 RTFIKMKEFFFTGSLLKYSGFLFG 274

[Close]
BLAST of Csa4G011090 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.3e-35
Identity = 93/267 (34.83%), Postives = 139/267 (52.06%), Query Frame = 1 

Query: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFN 60
           +++  R+VW  NL  E  ++++ +  +P I MDTEFPG + +S  R    + LY  LK N
Sbjct: 15  VTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKAN 74

Query: 61  VNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKG 120
           V+ L ++Q+GLTL D N          H G  W F F DFD   D  +P S++ L+  +G
Sbjct: 75  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR-RQG 134

Query: 121 FEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVE 180
            +F++  +DG+ S  F    +      N    W+TFH  YD  YL+K++  + +P ++ E
Sbjct: 135 IDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGE 194

Query: 181 FAIIAQRFLG-TVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIA 240
           F  + +   G  V D+K+M+  CER + G  GL R+A  L+VN  V      GSDSLL  
Sbjct: 195 FKRVMRVLFGERVYDVKHMMKFCERRLFG--GLDRVARTLEVNRAVGKCHQAGSDSLLTW 254

Query: 241 LAYVKMKKLKL---SSENTGGFLYGFQ 250
            A+ +M+ L       E   G LYG +
Sbjct: 255 HAFQRMRDLYFVQDGPEKHAGVLYGLE 278

[Close]
BLAST of Csa4G011090 vs. TAIR10
Match: AT1G06450.1 (AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 7.4e-35
Identity = 84/248 (33.87%), Postives = 134/248 (54.03%), Query Frame = 1 

Query: 6   RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKI 65
           R+VW  N+ +E+A + + L +FP+I  DTE+PG +  T   +  +  Y+ +K NV + K+
Sbjct: 10  RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKL 69

Query: 66  LQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAE 125
           +Q G TL +    +G  W   FS+F + +D  +  S+++L+ + G + +K R +G+    
Sbjct: 70  IQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRH-GLDLQKIRDEGVDM-- 129

Query: 126 FRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTV 185
           F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFA    +  G V
Sbjct: 130 FGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQV 189

Query: 186 NDLKYMIGHCERLMKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSE 245
            D K M G CE L +  LGL +LA+LL +         GSDSL+ AL ++K+K +   S 
Sbjct: 190 YDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYEDSR 249

Query: 246 NTGGFLYG 248
              G +YG
Sbjct: 250 FARGLIYG 253

[Close]
BLAST of Csa4G011090 vs. TAIR10
Match: AT3G44240.1 (AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 83/218 (38.07%), Postives = 120/218 (55.05%), Query Frame = 1 

Query: 17  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDEN 76
           ++++ D L  +  I +DTEFP  LR T + A  E  Y D+ F+V+  K++QLGLTL D N
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 77  EHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIP-SAEFRRAFLPIFS 136
             +G +W   FSDF    D  +  S+++L+ N G + +K R++GI     F   F  +  
Sbjct: 61  GRIGGTWEINFSDFGVD-DARNEKSIEFLRRN-GLDLRKIREEGIRIEGFFSEMFWMLKK 120

Query: 137 SNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCERLM 196
           + R   W+TFHG YD+AYLLK    +A+P +   F+    R LG+V DLK M G CE L 
Sbjct: 121 TRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL- 180

Query: 197 KGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKM 232
              LGL+ LA    +N   T    GS++ L A+ + K+
Sbjct: 181 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]
BLAST of Csa4G011090 vs. TAIR10
Match: AT5G22250.1 (AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 90/269 (33.46%), Postives = 140/269 (52.04%), Query Frame = 1 

Query: 3   LFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTP-----RGAPQEHLYQDLK 62
           + +R VW +NL  E  ++   +  +P I MDTEFPG +         RG P  +LY  LK
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNP-NYLYNLLK 71

Query: 63  FNVNHLKILQLGLTLMDENEHV---------GLSWVFTFSDFDEQTDLSSPTSMQYLKNN 122
            NV+ L ++Q+GLTL D + ++            W F F DFD + D  +P S++ L+ +
Sbjct: 72  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 131

Query: 123 KGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMIIKAMPESM 182
            G +F++ R++G+ S  F    +      N    W+TFH  YD  YL+K++  + +P ++
Sbjct: 132 -GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVAL 191

Query: 183 VEFAIIAQRFLG-TVNDLKYMIGHCERLMKGELGLKRLAELLDVNDTV---FSGGSDSLL 242
            EF  + + F G  V D+K+++  CE+ + G  GL R+A  L+VN  V      GSDSLL
Sbjct: 192 REFLGLLRAFFGDRVYDVKHIMRFCEQRLYG--GLDRVARSLEVNRAVGKCHQAGSDSLL 251

Query: 243 IALAYVKMKKLKL---SSENTGGFLYGFQ 250
              A+ +M+ L      +E   G LYG +
Sbjct: 252 TWQAFQRMRDLYFVEDGAEKHAGVLYGLE 276

[Close]
BLAST of Csa4G011090 vs. NCBI nr
Match: gi|449467363|ref|XP_004151393.1| (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 6.1e-148
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1 

Query: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV 60
           MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV
Sbjct: 1   MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNV 60

Query: 61  NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG 120
           NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG
Sbjct: 61  NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDG 120

Query: 121 IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT 180
           IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT
Sbjct: 121 IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGT 180

Query: 181 VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN 240
           VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN
Sbjct: 181 VNDLKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSEN 240

Query: 241 TGGFLYGFQYRIRGYKTFCYRY 263
           TGGFLYGFQYRIRGYKTFCYRY
Sbjct: 241 TGGFLYGFQYRIRGYKTFCYRY 262

[Close]
BLAST of Csa4G011090 vs. NCBI nr
Match: gi|659108981|ref|XP_008454486.1| (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-127
Identity = 228/258 (88.37%), Postives = 240/258 (93.02%), Query Frame = 1 

Query: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63
           FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHL
Sbjct: 3   FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHL 62

Query: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123
           KILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+QYLKN KGFEFKKQRKDGIPS
Sbjct: 63  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPS 122

Query: 124 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVND 183
           AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFAIIAQR LGTVND
Sbjct: 123 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVND 182

Query: 184 LKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTG 243
           LK+MI +CE LM GELGLKRLAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T 
Sbjct: 183 LKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITD 242

Query: 244 GFLYGFQYRIRGYKTFCY 261
           GFLYGF YRIRGY+TFCY
Sbjct: 243 GFLYGFYYRIRGYRTFCY 260

[Close]
BLAST of Csa4G011090 vs. NCBI nr
Match: gi|659133291|ref|XP_008466654.1| (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-111
Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 1 

Query: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63
           FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHL
Sbjct: 3   FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHL 62

Query: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123
           KILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+QYLKNNK FEFKK RK  IPS
Sbjct: 63  KILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPS 122

Query: 124 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVND 183
           AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFA IAQR LGTVND
Sbjct: 123 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVND 182

Query: 184 LKYMIGHCERLMKGELGLKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKL 235
           LK+MI +CE LM GELGLKRLAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Sbjct: 183 LKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAYVKMKKM 233

[Close]
BLAST of Csa4G011090 vs. NCBI nr
Match: gi|659108983|ref|XP_008454487.1| (PREDICTED: probable CCR4-associated factor 1 homolog 6 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.6e-87
Identity = 163/192 (84.90%), Postives = 173/192 (90.10%), Query Frame = 1 

Query: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63
           FVRQVWYHNL QEL ILND LFKFPVI MDTEFPGFLRST RGAP+EHLYQDLKFN+NHL
Sbjct: 3   FVRQVWYHNLTQELTILNDRLFKFPVIAMDTEFPGFLRSTSRGAPEEHLYQDLKFNLNHL 62

Query: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123
           KILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+QYLKN      KKQRKDGIPS
Sbjct: 63  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN------KKQRKDGIPS 122

Query: 124 AEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMIIKAMPESMVEFAIIAQRFLGTVND 183
           AEFR AFLPI  SN+ITKWITFHGI+DVAYLLKLM+I+ MP+SMVEFAIIAQR LGTVND
Sbjct: 123 AEFRHAFLPILFSNQITKWITFHGIHDVAYLLKLMMIRTMPDSMVEFAIIAQRHLGTVND 182

Query: 184 LKYMIGHCERLM 196
           LK+MI +CE LM
Sbjct: 183 LKHMIRNCEHLM 188

[Close]
BLAST of Csa4G011090 vs. NCBI nr
Match: gi|659096588|ref|XP_008449176.1| (PREDICTED: probable CCR4-associated factor 1 homolog 9 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 4.5e-74
Identity = 134/146 (91.78%), Postives = 140/146 (95.89%), Query Frame = 1 

Query: 4   FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHL 63
           F+RQVWYHNL QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EHLYQDLKFN+NHL
Sbjct: 3   FIRQVWYHNLTQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHLYQDLKFNLNHL 62

Query: 64  KILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPS 123
           KILQ GLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q+LKNNKGFEFKKQ+KDGIPS
Sbjct: 63  KILQPGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQFLKNNKGFEFKKQKKDGIPS 122

Query: 124 AEFRRAFLPIFSSNRITKWITFHGIY 150
            EFRRAFLPIFSSNRITKWITFHGIY
Sbjct: 123 TEFRRAFLPIFSSNRITKWITFHGIY 148

The following BLAST results are available for this feature:
BLAST of Csa4G011090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1B_ARATH3.5e-3434.85Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CAF1I_ARATH5.9e-3434.83Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE... [more]
CAF1A_ARATH1.3e-3333.87Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE... [more]
CAF1H_ARATH4.2e-3238.07Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE... [more]
CAF1K_ARATH4.2e-3233.46Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 ... [more]
BLAST of Csa4G011090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTU4_CUCSA4.3e-148100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011090 PE=4 SV=1[more]
A0A0A0LPP0_CUCSA5.7e-5243.58Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270190 PE=4 SV=1[more]
V4S8J5_9ROSI8.5e-4842.34Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013857mg PE=4 SV=1[more]
M5XIY4_PRUPE1.0e-4543.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023187mg PE=4 SV=1[more]
M5Y7U4_PRUPE1.0e-4543.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017181mg PE=4 SV=1[more]
BLAST of Csa4G011090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15920.22.0e-3534.85 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.13.3e-3534.83 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G06450.17.4e-3533.87 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44240.12.4e-3338.07 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G22250.12.4e-3333.46 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Csa4G011090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467363|ref|XP_004151393.1|6.1e-148100.00PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus][more]
gi|659108981|ref|XP_008454486.1|2.0e-12788.37PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
gi|659133291|ref|XP_008466654.1|2.1e-11187.88PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
gi|659108983|ref|XP_008454487.1|1.6e-8784.90PREDICTED: probable CCR4-associated factor 1 homolog 6 [Cucumis melo][more]
gi|659096588|ref|XP_008449176.1|4.5e-7491.78PREDICTED: probable CCR4-associated factor 1 homolog 9 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G011090.1Csa4G011090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 10..122
score: 1.
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 3..241
score: 5.8
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 3..237
score: 1.73
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..234
score: 4.4