Csa1G599570 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G599570
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Peptidyl-tRNA hydrolase, putative; contains IPR001328 (Peptidyl-tRNA hydrolase)
Location	Chr1 : 23075428 .. 23078382 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAATAAGTTAACCAAGCGTGGCTTTTGTACACCATTTTTCGGTGTTCATCTTGAATGCCATTTTGATTTTGTAATGAGAGGTATTCGTTCAGTCATTCTTATTTTGGTTCAGTGCAGGTGGGCTTTGAGATGATTGATGTGTTTGCTGAGTCTGTTGGAATTCCAATGAATAGGGTTCACTGTAAAGCTGTGTTTGGTGAAGGTATGTTCTCTTTTTATGTTATAATTTTTTTCGTTTCATCTGTTAAGTGTTTTCAGGTGTTATTGTTGTTTGATTCCATGAAGTTCAAAGATATTTTGGCTATTGATGTCAGGTTTTGTTGGGGACATCCCTGTTTTTCTGGCAAAGCCTCAAACTTACATGAACCTGAGTGGTGAATCTGTATGTGATTGAGAAACTTTTTTTGGCTTCTGTCTTCTTATAAGTTGGGTTCCTTGTAGTCTTAGACTCTTAGGTTTTTATTATTAGAGTTCATAGATTCATTTGAGTGAATTCATCTTGCAAAATTATGTCGACTTTGAAGGGGAAGAAGCTGGTAGTCGTTCTAAAATCCACTAGGAAGTTGGGAATACAGTTCCTGTGAAGGCTAATGTAGCTAGTTCAATACATGTCTATGATATCTTCTTTACCGAGATTGGTTTGATATTGTAAATCTTGTTTTTTTCATCATACTGCAGGCAGGACCACTTGCAGCTTATTACAAGCTACCTCTGAACCGTGTACTTGTGGTAAATCCTTATGTGCATTTCAGCATTTTTTTTTCTCATTAGAGTTCTTAAATGAACAGTGCCACAGTATTGTTTTGAGTATTTGACTGCTGCAGTTTCACGATGACATGAACTTACCTTGTGGGGTGCTTCGGCTTCAACACAATGGAGGACACGACTACCACAAAGGGTATCATTGAAACTATTTTATTATTTTTTTTGTTTTTTATATTTTAGTCGTCTTCTATTGTAGCCTATCTCCACTCTATAACCCCAATCTAATTGCCCTTTGTCTCTACACCTCTTACATTAACATACATTTGACTGGTTTTTTATAATAAGAAAATGAACTTTCACTGAGAAAGAAATGAAATCACAAGGGTGTCCAATAGAAAAATACCCCAGGAAAGGAGACTCAACTAAATAAAAGGGCTCCAACCAACATCAAGAAAATAAAACCAATAATCACAAAGAGGCATTACATCGGTGCCCAAAGAGAAATATTGAATCTGTCAAGGGACCAAGCATCAATAGGTGCTTCTCAAGGCTCTCTAAAAGTCCCGTTTCTCTTTCCCCTCAAACTCCACATCACAAAACAAATCCTTTCTTGCTTAAAAAACTTCATCTTCTGAACAAAAGCTGGATGAAGAAGGAACTCCTTGCTCATCTCCTCATAACCTCTGTGTCTTAAACATTGAAAGCCAAACACATCAAAAAAGGGATGCCACTCTTAACAAAGTCACAGCCTCCAAGGAATATGATTATGATCTTCCTCCACTCTCCGGCAAAGAATCCATTGAAAAAGCCCAATCAAAGTAGACATCTTTCTTGCAAGCTGATCTGAAGTGTTAACCCTTCCATGGATGACCTGCTTGCCACATGAACTGAATCTTTGGGATTTTTACCTTCCGTAGATGAAATCGATTAAGCTATTTTCATTTGAAAAGAAAAACGATCCAATAGGAGTTTGTAAGATTATTTATTATCTTGGAGTTAGCATCCAGCATGCAAGAGTGATGCTGATCAGATGCATCCTATTTGAATTTCTTAGTTATGTTCGATCATGTCAGTGAATTGCTCCATTAGAGGCTCTTAAAGAATCTAAGCATAGCATTTGGGGGATCAAGATGTTGTACATCACCTTCTAATACGACTATCGAATGCTATTGCCTCAAAATAAAATAAAAAAAACCTTGAATGCTATCTATGTCCACAAAGTTTTTTCAACACAATTCCTCTAAATATTACATTAATCCGGCATGCTACAACTTTAACTTTATATATTTTTTTGAGACATACATTTTATTGTCCATGCTTGTAAATTTCCTGGCAGTATTCTTTCTTTTAGTAAAACCTTCACGACTTCTATTCTATGTTGCCTTTCTGGTACATCTTGAAATTGATTTCTATTTTAGGCTGAAGAGTGTCATTTATCATTTTCGAGGGAACAGAGAGTTTGCTAGGTTAAGAATTGGTAAGTTTTGTTGCCTACGCTATTTTGTACTTTTTTTTATGTTCTCTACTCTTAGAACATTTTTCTTTCTAGGCATTGGAAGGCCACCTGGTCAAATGGATTCCAAAGCATTCTTGCTTCAAAAGTTCAACAACACTGCTCAAGAACGAGTGAGTCTTTTTGCTGATTATAATATACAAAACTTATGGTTGAAACCTTTCTATTTTTCTTTGTTTCATTGAGCCCCCACGTGTTTCATTCACACCACAACTTCCTTGTTTTGCTTATATGTCATCTCTCGCTACCATTTTTTTGCTAAATGTGCACACCTTTGAAAAATATAGTTTGGATCCTTTTCCTGAGATGTTTTCAAATATGAAAAATTAAGTCAAATTATTTACAAGTTAAAATCTATCACTATCTGTTGTTGTCCGTCAATGATATACAGTGACATTTTGATATATTTGTAAATATATTTTAATAGTTTTGTCATTTAAAGCAATTACCTCTCTTAGTCTTCTTTTTATTTTTTGGTAAGTAGGTTGTATCTTCACATCAGTTATTCCTTTTGCTAACTCATTGCGAATAATGCTTGATTACATTATGCTTAATTAGTATCATCCTAGTTTAACAATACTTTTATTTTTGTTTAAAAAGATTGATACTGCATTACAAGAAGGGGTTGGCGCATTGAAGCTCCTATTGTCTCACGGTTTGTCCGAGAGTGCAAGACACTTCAACCACAAACAAAAATACAAGCATATAAGGCTACAAACCATGCCAGTATGA

mRNA sequence

ATGTTCAATAAGTTAACCAAGCGTGGCTTTTGTACACCATTTTTCGGTGTTCATCTTGAATGCCATTTTGATTTTGTAATGAGAGTGCAGGTGGGCTTTGAGATGATTGATGTGTTTGCTGAGTCTGTTGGAATTCCAATGAATAGGGTTCACTGTAAAGCTGTGTTTGGTGAAGGTTTTGTTGGGGACATCCCTGTTTTTCTGGCAAAGCCTCAAACTTACATGAACCTGAGTGGTGAATCTGCAGGACCACTTGCAGCTTATTACAAGCTACCTCTGAACCGTGTACTTGTGTTTCACGATGACATGAACTTACCTTGTGGGGTGCTTCGGCTTCAACACAATGGAGGACACGACTACCACAAAGGGCTGAAGAGTGTCATTTATCATTTTCGAGGGAACAGAGAGTTTGCTAGGTTAAGAATTGGCATTGGAAGGCCACCTGGTCAAATGGATTCCAAAGCATTCTTGCTTCAAAAGTTCAACAACACTGCTCAAGAACGAATTGATACTGCATTACAAGAAGGGGTTGGCGCATTGAAGCTCCTATTGTCTCACGGTTTGTCCGAGAGTGCAAGACACTTCAACCACAAACAAAAATACAAGCATATAAGGCTACAAACCATGCCAGTATGA

Coding sequence (CDS)

ATGTTCAATAAGTTAACCAAGCGTGGCTTTTGTACACCATTTTTCGGTGTTCATCTTGAATGCCATTTTGATTTTGTAATGAGAGTGCAGGTGGGCTTTGAGATGATTGATGTGTTTGCTGAGTCTGTTGGAATTCCAATGAATAGGGTTCACTGTAAAGCTGTGTTTGGTGAAGGTTTTGTTGGGGACATCCCTGTTTTTCTGGCAAAGCCTCAAACTTACATGAACCTGAGTGGTGAATCTGCAGGACCACTTGCAGCTTATTACAAGCTACCTCTGAACCGTGTACTTGTGTTTCACGATGACATGAACTTACCTTGTGGGGTGCTTCGGCTTCAACACAATGGAGGACACGACTACCACAAAGGGCTGAAGAGTGTCATTTATCATTTTCGAGGGAACAGAGAGTTTGCTAGGTTAAGAATTGGCATTGGAAGGCCACCTGGTCAAATGGATTCCAAAGCATTCTTGCTTCAAAAGTTCAACAACACTGCTCAAGAACGAATTGATACTGCATTACAAGAAGGGGTTGGCGCATTGAAGCTCCTATTGTCTCACGGTTTGTCCGAGAGTGCAAGACACTTCAACCACAAACAAAAATACAAGCATATAAGGCTACAAACCATGCCAGTATGA

Protein sequence

MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV*

Homology

[Close]

BLAST of Csa1G599570 vs. Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.4e-72
Identity = 141/216 (65.28%), Postives = 162/216 (75.00%), Query Frame = 1


Query: 1   MFNKLTKRGFCTP-------FFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCK 60
           M ++L++R +CT        F G+          R  +GFEMIDVFAESVGI MN V+ K
Sbjct: 1   MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFK 60

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           A+ G+GFV D+PV LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRLQ
Sbjct: 61  AIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQ 120

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
             GGH  H GLKSV+ HFRGNREFARLRIGIG+PPGQMD KAFLLQKF+  A+ER+D AL
Sbjct: 121 EKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKAL 180

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTM 210
            EGV ALKL+L+    ES R FN +QKYKH++  T+
Sbjct: 181 AEGVDALKLVLAKDFGESWRLFNVEQKYKHLKQHTI 216

[Close]

BLAST of Csa1G599570 vs. Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-50
Identity = 97/179 (54.19%), Postives = 125/179 (69.83%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  VGFEM+D  A   GI MN +  K++ G G +G++PV + KPQ+YMN SGE+ GPLAA
Sbjct: 78  RHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAA 137

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           YY++PL  +L+ +DD +LP GVLRLQ  GGH  H GL++VI H  G REF RL IGIG P
Sbjct: 138 YYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSP 197

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRL 207
           PG+MD +AFLLQKF++  + +IDTAL++GV A++ L+  G S S   FN  QKYK  R+
Sbjct: 198 PGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256

[Close]

BLAST of Csa1G599570 vs. Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.8e-49
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  VGFEMIDV A   G+ MN +  KA+ G G + D+P+ LAKPQTYMN SGES G LA+
Sbjct: 62  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 121

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           +Y++PL  +L+ +D+M LP GVLRLQ  GG  YH G+KSV+ H  G R F RL IGIG+P
Sbjct: 122 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 181

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYK 203
           PG MD KAFLLQKF+   Q++I+ AL++G  A+K L+ +G ++    FN  QKYK
Sbjct: 182 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236

[Close]

BLAST of Csa1G599570 vs. Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-48
Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  +GFEMID  A +  I MN +  KA+ G G VG++P+ L KPQ YMN SGES GPLAA
Sbjct: 68  RHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAA 127

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           YY++PL  +L+ +DDM L  GVLRLQ  GGH  H GLK+V  H  G R + RL IGIG P
Sbjct: 128 YYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNP 187

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYK 203
           PG MD KAFLLQKF+   ++++D  L++GV  +K L+  G S+S   FN  QKYK
Sbjct: 188 PGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 242

[Close]

BLAST of Csa1G599570 vs. Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-48
Identity = 89/177 (50.28%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  VGFEM+D  A++ GI MN V+ KA+FG+G +G+IP+ LAKPQT+MNLSGES G + +
Sbjct: 111 RHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVS 170

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           +YK+PL +VLV +DD++LP G LRL   GGH  H G++S+I   +G+R+F RLRIGIGRP
Sbjct: 171 FYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRP 230

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHI 205
           PG+MD+  F+L++FN   QE +D   Q G+ A+++LL  G ++SA   N ++  + +
Sbjct: 231 PGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of Csa1G599570 vs. TrEMBL
Match: A0A0A0M2E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599570 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.0e-120
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1


Query: 1   MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF 60
           MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF
Sbjct: 1   MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF 60

Query: 61  VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY 120
           VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY
Sbjct: 61  VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY 120

Query: 121 HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL 180
           HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL
Sbjct: 121 HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL 180

Query: 181 KLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           KLLLSHGLSESARHFNHKQKYKHIRLQTMPV
Sbjct: 181 KLLLSHGLSESARHFNHKQKYKHIRLQTMPV 211

[Close]

BLAST of Csa1G599570 vs. TrEMBL
Match: A0A0A0LWX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600200 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.6e-99
Identity = 187/218 (85.78%), Postives = 190/218 (87.16%), Query Frame = 1


Query: 1   MFNKLTKRGFCTP-------FFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCK 60
           MF+KLTKRGFCT        F G+          R  VGFEMIDVFAESVGIPMNRVHCK
Sbjct: 1   MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHNVGFEMIDVFAESVGIPMNRVHCK 60

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDM LPCGVLRLQ
Sbjct: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMTLPCGVLRLQ 120

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
           HNGGH YH GLKSVI HFRGNREFARLRIGIGRPPGQMD KAFLLQKFNNTAQERIDTAL
Sbjct: 121 HNGGHGYHNGLKSVISHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTAL 180

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           QEGVGALKLLLSH L ESARHFNH+QKYKHIRLQTMPV
Sbjct: 181 QEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218

[Close]

BLAST of Csa1G599570 vs. TrEMBL
Match: A0A059CQE8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01519 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-83
Identity = 163/216 (75.46%), Postives = 177/216 (81.94%), Query Frame = 1


Query: 1   MFNKLTKRGFCT----PFFGVHLECHFDFVM--RVQVGFEMIDVFAESVGIPMNRVHCKA 60
           M + + +R FCT    P+  V L    D     R  VGFEMID FAES GIPM+ VHCKA
Sbjct: 1   MHSVIARRCFCTGAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIPMSTVHCKA 60

Query: 61  VFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQH 120
           +FG+GFVGD+PVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDM+LPCGVLRLQ 
Sbjct: 61  MFGQGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMDLPCGVLRLQP 120

Query: 121 NGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQ 180
            GGH  H GLKSVIYHFRGNREFARLRIGIGRPPGQMD KAFLLQKFN TA+ERID ALQ
Sbjct: 121 KGGHGSHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNQTARERIDVALQ 180

Query: 181 EGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMP 211
           EG  ALKL+LS GL+ES R FN +QKYKHIRLQT+P
Sbjct: 181 EGADALKLVLSKGLTESTRCFNMEQKYKHIRLQTLP 216

[Close]

BLAST of Csa1G599570 vs. TrEMBL
Match: A0A067EU22_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027742mg PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-82
Identity = 163/217 (75.12%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 1   MFNKLTKRGFCT----PFFGVHLECHFDFVMRV---QVGFEMIDVFAESVGIPMNRVHCK 60
           + N+  +RGFCT    P+  V L    D        QVGFEMID FAES GI MN VHCK
Sbjct: 2   LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 62  ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
           HNGGH  H GLKSV+ +FRGNREFARLRIGIGRPPGQMD KAFLLQKFN  A+ERIDTAL
Sbjct: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMP 211
           QEGV  LKLLLS GL+ESARHFN  QKYKHIRLQ MP
Sbjct: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMP 218

[Close]

BLAST of Csa1G599570 vs. TrEMBL
Match: V4TZ00_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016635mg PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-82
Identity = 163/217 (75.12%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 1   MFNKLTKRGFCT----PFFGVHLECHFDFVMRV---QVGFEMIDVFAESVGIPMNRVHCK 60
           + N+  +RGFCT    P+  V L    D        QVGFEMID FAES GI MN VHCK
Sbjct: 2   LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 62  ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
           HNGGH  H GLKSV+ +FRGNREFARLRIGIGRPPGQMD KAFLLQKFN  A+ERIDTAL
Sbjct: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMP 211
           QEGV  LKLLLS GL+ESARHFN  QKYKHIRLQ MP
Sbjct: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMP 218

[Close]

BLAST of Csa1G599570 vs. TAIR10
Match: AT5G19830.1 (AT5G19830.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-73
Identity = 141/216 (65.28%), Postives = 162/216 (75.00%), Query Frame = 1


Query: 1   MFNKLTKRGFCTP-------FFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCK 60
           M ++L++R +CT        F G+          R  +GFEMIDVFAESVGI MN V+ K
Sbjct: 1   MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFK 60

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           A+ G+GFV D+PV LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRLQ
Sbjct: 61  AIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQ 120

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
             GGH  H GLKSV+ HFRGNREFARLRIGIG+PPGQMD KAFLLQKF+  A+ER+D AL
Sbjct: 121 EKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKAL 180

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTM 210
            EGV ALKL+L+    ES R FN +QKYKH++  T+
Sbjct: 181 AEGVDALKLVLAKDFGESWRLFNVEQKYKHLKQHTI 216

[Close]

BLAST of Csa1G599570 vs. TAIR10
Match: AT5G16140.1 (AT5G16140.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 195.3 bits (495), Expect = 3.9e-50
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  VGFEMIDV A   G+ MN +  KA+ G G + D+P+ LAKPQTYMN SGES G LA+
Sbjct: 62  RHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLAS 121

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           +Y++PL  +L+ +D+M LP GVLRLQ  GG  YH G+KSV+ H  G R F RL IGIG+P
Sbjct: 122 HYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKP 181

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYK 203
           PG MD KAFLLQKF+   Q++I+ AL++G  A+K L+ +G ++    FN  QKYK
Sbjct: 182 PGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYK 236

[Close]

BLAST of Csa1G599570 vs. TAIR10
Match: AT1G18440.1 (AT1G18440.1 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-49
Identity = 89/177 (50.28%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  VGFEM+D  A++ GI MN V+ KA+FG+G +G+IP+ LAKPQT+MNLSGES G + +
Sbjct: 111 RHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVS 170

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           +YK+PL +VLV +DD++LP G LRL   GGH  H G++S+I   +G+R+F RLRIGIGRP
Sbjct: 171 FYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRP 230

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHI 205
           PG+MD+  F+L++FN   QE +D   Q G+ A+++LL  G ++SA   N ++  + +
Sbjct: 231 PGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of Csa1G599570 vs. TAIR10
Match: AT5G38290.2 (AT5G38290.2 Peptidyl-tRNA hydrolase family protein)

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-49
Identity = 94/175 (53.71%), Postives = 116/175 (66.29%), Query Frame = 1


Query: 28  RVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA 87
           R  +GFEMID  A +  I MN +  KA+ G G VG++P+ L KPQ YMN SGES GPLAA
Sbjct: 72  RHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAA 131

Query: 88  YYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRP 147
           YY++PL  +L+ +DDM L  GVLRLQ  GGH  H GLK+V  H  G R + RL IGIG P
Sbjct: 132 YYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNP 191

Query: 148 PGQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYK 203
           PG MD KAFLLQKF+   ++++D  L++GV  +K L+  G S+S   FN  QKYK
Sbjct: 192 PGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYK 246

[Close]

BLAST of Csa1G599570 vs. NCBI nr
Match: gi|700211270|gb|KGN66366.1| (hypothetical protein Csa_1G599570 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 4.3e-120
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1


Query: 1   MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF 60
           MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF
Sbjct: 1   MFNKLTKRGFCTPFFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCKAVFGEGF 60

Query: 61  VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY 120
           VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY
Sbjct: 61  VGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDY 120

Query: 121 HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL 180
           HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL
Sbjct: 121 HKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTALQEGVGAL 180

Query: 181 KLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           KLLLSHGLSESARHFNHKQKYKHIRLQTMPV
Sbjct: 181 KLLLSHGLSESARHFNHKQKYKHIRLQTMPV 211

[Close]

BLAST of Csa1G599570 vs. NCBI nr
Match: gi|778665345|ref|XP_011648541.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial, partial [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 2.6e-101
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1


Query: 29  VQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAY 88
           VQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAY
Sbjct: 15  VQVGFEMIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAY 74

Query: 89  YKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPP 148
           YKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPP
Sbjct: 75  YKLPLNRVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPP 134

Query: 149 GQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQT 208
           GQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQT
Sbjct: 135 GQMDSKAFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQT 194

Query: 209 MPV 212
           MPV
Sbjct: 195 MPV 197

[Close]

BLAST of Csa1G599570 vs. NCBI nr
Match: gi|659100293|ref|XP_008451022.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 3.5e-101
Identity = 189/218 (86.70%), Postives = 193/218 (88.53%), Query Frame = 1


Query: 1   MFNKLTKRGFCTP-------FFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCK 60
           MFNKLTKRGFCT        F G+          R  VGF+MIDVFAESVGIPMNRVHCK
Sbjct: 1   MFNKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHNVGFQMIDVFAESVGIPMNRVHCK 60

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA+YKLPLNRVLVFHDDMNLPCGVLRLQ
Sbjct: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAHYKLPLNRVLVFHDDMNLPCGVLRLQ 120

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
           HNGGHDYH GLKSVIYHFRGNREFARLRIGIGRPPGQMD KAFLLQKFNNTAQERIDTAL
Sbjct: 121 HNGGHDYHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTAL 180

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           QEGVGALK LLSHGLSES RHFNH+QKYKHIRLQTMPV
Sbjct: 181 QEGVGALKRLLSHGLSESVRHFNHEQKYKHIRLQTMPV 218

[Close]

BLAST of Csa1G599570 vs. NCBI nr
Match: gi|778663349|ref|XP_004144094.2| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 9.4e-99
Identity = 187/218 (85.78%), Postives = 190/218 (87.16%), Query Frame = 1


Query: 1   MFNKLTKRGFCTP-------FFGVHLECHFDFVMRVQVGFEMIDVFAESVGIPMNRVHCK 60
           MF+KLTKRGFCT        F G+          R  VGFEMIDVFAESVGIPMNRVHCK
Sbjct: 1   MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHNVGFEMIDVFAESVGIPMNRVHCK 60

Query: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
           AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDM LPCGVLRLQ
Sbjct: 61  AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMTLPCGVLRLQ 120

Query: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
           HNGGH YH GLKSVI HFRGNREFARLRIGIGRPPGQMD KAFLLQKFNNTAQERIDTAL
Sbjct: 121 HNGGHGYHNGLKSVISHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTAL 180

Query: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           QEGVGALKLLLSH L ESARHFNH+QKYKHIRLQTMPV
Sbjct: 181 QEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218

[Close]

BLAST of Csa1G599570 vs. NCBI nr
Match: gi|659100297|ref|XP_008451023.1| (PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 1.8e-94
Identity = 171/177 (96.61%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 35  MIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLN 94
           MIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAA+YKLPLN
Sbjct: 1   MIDVFAESVGIPMNRVHCKAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAHYKLPLN 60

Query: 95  RVLVFHDDMNLPCGVLRLQHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSK 154
           RVLVFHDDMNLPCGVLRLQHNGGHDYH GLKSVIYHFRGNREFARLRIGIGRPPGQMD K
Sbjct: 61  RVLVFHDDMNLPCGVLRLQHNGGHDYHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPK 120

Query: 155 AFLLQKFNNTAQERIDTALQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 212
           AFLLQKFNNTAQERIDTALQEGVGALK LLSHGLSES RHFNH+QKYKHIRLQTMPV
Sbjct: 121 AFLLQKFNNTAQERIDTALQEGVGALKRLLSHGLSESVRHFNHEQKYKHIRLQTMPV 177

The following BLAST results are available for this feature:

BLAST of Csa1G599570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTHM_ARATH	3.4e-72	65.28	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2...	[more]
CRS2_MAIZE	3.6e-50	54.19	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m...	[more]
CRS2B_ARATH	6.8e-49	54.29	Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara...	[more]
CRS2A_ARATH	4.4e-48	53.71	Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Ara...	[more]
PTHC_ARATH	4.4e-48	50.28	Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2...	[more]

BLAST of Csa1G599570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M2E2_CUCSA	3.0e-120	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599570 PE=4 SV=1	[more]
A0A0A0LWX1_CUCSA	6.6e-99	85.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600200 PE=3 SV=1	[more]
A0A059CQE8_EUCGR	2.3e-83	75.46	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01519 PE=3 SV=1	[more]
A0A067EU22_CITSI	1.1e-82	75.12	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027742mg PE=3 SV=1	[more]
V4TZ00_9ROSI	1.1e-82	75.12	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016635mg PE=3 SV=1	[more]

BLAST of Csa1G599570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19830.1	1.9e-73	65.28	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.1	3.9e-50	54.29	Peptidyl-tRNA hydrolase family protein	[more]
AT1G18440.1	2.5e-49	50.28	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.2	2.5e-49	53.71	Peptidyl-tRNA hydrolase family protein	[more]

BLAST of Csa1G599570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700211270\|gb\|KGN66366.1\|	4.3e-120	100.00	hypothetical protein Csa_1G599570 [Cucumis sativus]	[more]
gi\|778665345\|ref\|XP_011648541.1\|	2.6e-101	100.00	PREDICTED: peptidyl-tRNA hydrolase, mitochondrial, partial [Cucumis sativus]	[more]
gi\|659100293\|ref\|XP_008451022.1\|	3.5e-101	86.70	PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucumis melo]	[more]
gi\|778663349\|ref\|XP_004144094.2\|	9.4e-99	85.78	PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Cucumis sativus]	[more]
gi\|659100297\|ref\|XP_008451023.1\|	1.8e-94	96.61	PREDICTED: peptidyl-tRNA hydrolase, mitochondrial isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001328	Pept_tRNA_hydro

Vocabulary: **Molecular Function**
Term	Definition
GO:0004045	aminoacyl-tRNA hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G599570.1	Csa1G599570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	GENE3D	G3DSA:3.40.50.1470		coord: 30..198 score: 5.9
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	PEPTIDYL-TRNA HYDROLASE	coord: 28..206 score: 7.8E
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 28..190 score: 3.4
IPR001328	Peptidyl-tRNA hydrolase	unknown	SSF53178	Peptidyl-tRNA hydrolase-like	coord: 30..196 score: 6.93
None	No IPR available	PANTHER	PTHR17224:SF4	PEPTIDYL-TRNA HYDROLASE, MITOCHONDRIAL	coord: 28..206 score: 7.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G599570	Cla011101	Watermelon (97103) v1	cuwmB020
Csa1G599570	MELO3C015585	Melon (DHL92) v3.5.1	cumeB041
Csa1G599570	ClCG03G014460	Watermelon (Charleston Gray)	cuwcgB046
Csa1G599570	Lsi06G004030	Bottle gourd (USVL1VR-Ls)	culsiB058
Csa1G599570	MELO3C015585.2	Melon (DHL92) v3.6.1	cumedB033
Csa1G599570	Cla97C03G064680	Watermelon (97103) v2	cuwmbB042
Csa1G599570	Bhi02G001444	Wax gourd	cuwgoB094
Csa1G599570	CSPI01G29310	Wild cucumber (PI 183967)	cpicuB001
Csa1G599570	Cucsa.142350	Cucumber (Gy14) v1	cgycuB205
Csa1G599570	CmaCh10G010040	Cucurbita maxima (Rimu)	cmacuB057
Csa1G599570	CmoCh10G010590	Cucurbita moschata (Rifu)	cmocuB047
Csa1G599570	CsGy1G028550	Cucumber (Gy14) v2	cgybcuB002
Csa1G599570	Carg06124	Silver-seed gourd	carcuB0015

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G599570	Cucurbita maxima (Rimu)	cmacuB085
Csa1G599570	Cucurbita moschata (Rifu)	cmocuB075
Csa1G599570	Cucurbita pepo (Zucchini)	cpecuB349
Csa1G599570	Cucurbita pepo (Zucchini)	cpecuB652
Csa1G599570	Silver-seed gourd	carcuB0192