Csa1G599470 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G599470
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPumilio-family RNA binding protein; contains IPR016024 (Armadillo-type fold)
LocationChr1 : 22954759 .. 22960280 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATGGAAAACGTAACACTCCAAATCCATGCAGGTTACTTGATTACTCTCTCCCTTTTGATATTTTTTTTGCCAATCTCTTTATTTTTCCTATAATTTCTCCTTCTTTAATCCCTTCTCTTCTCATTCTCTTCCTCTTCACGCCGCCTCTCTTCTTGTTCTTGTTCTTCTTCTTCTACACCTACACCCCTTTTTCCTATTCTATTCGATCATTCTTGGAAACCCCACATTTTCTTTGATCAAAAAACTCTTCCTTTTCCTCTACATTTTACCCCCTTTCCCCCCTTTTTCCTTCACTGATACGTGGGCCTTCCTTATTTTCTCTAATCGCCTATTGGGTTAGTTTTGATTCATCCCTTTTCGTTTTTTCTTCCCTTTGTGTTTTTGGAGCTTTTGCGATACTGATTTTTTTGATCAAGTTGTGTTTCTTTAGGACCCTTTTTCTGATTTTGATGATCGAAGGTTATTTCGGTGTGTTTTGCGATTTTTCTATGTCTATTTATTTACTGCATTGGTTGTTTTGATTGTTTCGGTACGGTGTTTTTGGTTGATTTTGTTTCTTTTTATTTTTTTGCTTCTTGTCCTTGTGTAGAAGTTTGACTGATATTCAGAAGGATTTTGTTCTTGTTTCTTTTAATCTCTATGAATGGTCTGTTTTCACTGTGATTGAAGGGCTCTATTAGTGAGATCGTCACAAATTTGTGGGTTAGGTGATTTGGATTGTGATTGTTGGCTTTTGTTCAATATTTTCATTGTTCTTTATCTGGGTTGTGGGATAGCAGTGATTGGTTGCTTTTGTACAATGTAGGTTGGAGATTTGTTCAAATTATGATCTGATCTTTGATGCTAAAAAGTGTGTGTGTTTTGCTGCTTGGCAGGCGAAGATAGAAACGTTTGTGTGTCACTGTATCATTTATTCTTTAAGTGAGGGGTTTGCTTTTGTTACCTTTTGGTACAGTGAGTTTTTTGTGAGTTAGTTACAACAATGGAAGAGATGCCTAATGAAAATGAATTCGAAGACATTGCGAAATATATTGGCAATCAGATTCCTAATGTTGCATCTGGTAATGCAGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGTATGCTCTTTTCTTTTCATTTCTGATACCCCTCATGGATTAAACACGAGCATTCGTCAAAGTCATTGTATTTCCTTTTATTGTTTATTAATTCTCTTCCAATATCTTCTATCTTAACGACAGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGGTGAGGATTCTATTTTCTAGATCTGTTATTTTGACTTTGTCTGTTTCAAGCGTGAAGGCACTCACCTAACCTGTTGTTTAGAGTTTAGGCAAAGAACACTATCGGTATCTGTTTAATCATAGGGAATTGTAAAATAAATTCCATGTGTGATGCAACAAAGTAATATTTTTATTTGAAATTTTCTTCCCTTTTAGTTCATCTTTCTGGGGATCTTTGCTATTCGCTTTCAGATTATTCCTTTGGTTATTTCCAATTCCAGAAAAAGAAAGTCTTCAAAAGTCTTTGGTAGGCCTTCTACTTAGTTGAGTATGAGGAGAGGAAGGAATGACAGCCTAGATAAGTCTACTGCGAGCAGCAGCAAAATTTTAAAGGAAATAGTTTGAAGGGTAGAATGACATGAAGCAAGGAAAGGAATTAATGGAAAATCTGAGAGCAGAGTCCAACTTGTTGGGAGTATCTGAGTAGGGGGAGGACACTCTTAATATTCTTTCCAGCTTTCTACTTCCTCTCAATCTTTAGATTTCTTCCAATGCTTTCTCAGTCTTTTCCATAGTAAACACTTGTATATCCATATCATTAAATTGGCAAAATAATAATGATGTGAATATGCTTTAGGGTCAGGTGAGCAGAGCGTTGTAGCCAGTTTGAGAGTTTATGATAAATTAAACACTTGTATATTCATCAATTGATATGCTTGAATGACTTTTAGACTTTTGGTTTTTCTACTTGCAAGATAGAAGATTCATATTAAAAGTTGGGGTTCATTAGAGTGCATTAGTTCATTCATTGTGCATCTATCACCCGTACTTGGATCTTTCCTAATACTTTCTTCCTGAGGTCTGAATATTCCAGGATTCAAACTTCTTCTCTTCATCATCATTTAGATATAAAAATTTATTGGTGGATTAAGAGTCATTGCATGTTTAACAGCTGAATTTCTCTTTTAATTTCTTTCTTTTTTTTATTGTTGATTTCATTGTTAATGGTGTTGTTTCTCATGTGTTCTTGCATCCTTTACCAAATTTACTGGAAATTTTCTGTTCTCTCAAATGCTTGTACTCCCTTTCTCCTTAAAACATAAAAGTGAAAACGTGGTATTCCGTTTCTCTCTCTGTAATCAATTATTTCCATAGATTCTTATATTGTTTTATTAGCAACTATGTGCAGTTGTGTTGTCACGGAATAGAATATCAATTTTAATAACCGTACTTGAACAAGATATGTTCGGTTGTACAACTATGTCCTTAAGTTTTAAGAATACACTTTTAGCTGTATAGATGGTCAAACTATTTTTTGGGCTCAAATTTGGTGAAATTAAAGTAGATATGATTTATTGTGGCAGGACTCATTGACCTTCTTAACCCCTAGCATGTGTAACCCCCTTCTGCTCTTTATCCAGTGGTTATTGATATGAAGAAGGGATCATTTTATAAAATGATTTCTGTGAAACAAAAAGTTAATTCCGGTTATGGCTTTCTCTGCAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGTAATTTTATGCTCTCCCTTTCTTTTCTTTGTTTTTTTTCCTCTAATCCTTTTTTAAGTTCTAAATCTACTTTGTTTCTTGTACCTTTGGTTTGTGTTCATTTTGGTCTTTTAAAATGTTTATTTTTTCATTTTGGTTCTTGTACTTTCAACTTTCTTTCATTCAGTCTTGTACTGTCAAGATGTTCGTCGTGGGCTTCATTCTTTTAAATTCGGACAATTTTGGTGTCTTTATTTCATTTGAAATTTTGACATGACAGTTCGTCACTATATTTTTAAAATTGAAGCCATAACTTATTGTGTATAAAACCCAAGTTAAATTTTGTGTAAATATAGGGATCAAGTACGATGAACTAGAACTGACAAATAAAATTTCTCTAAATTTAATTACATGCAGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGTTAGCAGGGCCAAGATTACCCTTTTCCTTTTGGTATCTATGTTCATGTATGAGAAATATGTTCATTTACCTTCTAGCAAACGTTTTCCAAAGAAGATTTATTGCCTTCTACAAGTGATTGTCAAACTGATTACTAATGTAGTTGTAACAATGCTTGCCTATTTGCCATGTCAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAACTGGTTACGAGAGTGAGAACTTCTAGTCATTATTTCATCTTGGTAAGAAAAACACAACTGATATTTGTTTTCCTTCAGTACTTTCTTTTGGTAAAAAGGGACCAGGTCTACCTGGGAAGAAAACTCATCAAAGGTGAAGACATCCACATCTCTTCACTTCTAATTGTTGTTTTGGATAAAAAGGTTTAGGATGCGTAAACATTGGTCGGTCGGTAAGTCAGTCGTTTGGCTCGTTGGCCATGTTATTTTTGTTGTTTTTTGTT

mRNA sequence

ATGGAAAACGTAACACTCCAAATCCATGCAGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Coding sequence (CDS)

ATGGAAAACGTAACACTCCAAATCCATGCAGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Protein sequence

MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN*
Homology
[Close]
BLAST of Csa1G599470 vs. Swiss-Prot
Match: PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2)

HSP 1 Score: 417.2 bits (1071), Expect = 3.6e-115
Identity = 259/617 (41.98%), Postives = 359/617 (58.18%), Query Frame = 1 

Query: 72  FEKLNFGDESKVRA---WKSRAILLENHYSDNLSKQLQNI-DPSVFAAWSSSNHLTNGVH 131
           FEKL  G+  KV +   +    I L +  S ++ K  Q + D   F    S  +L  G+ 
Sbjct: 12  FEKL-LGEIPKVTSGNDYNHFPICLSSSRSQSIKKVDQYLPDDRAFTTSFSEANLHFGI- 71

Query: 132 DSHSTRLGHQN--SPSRYIPEQ----YKKWQTGQLQP--FESLSPNAHLTHEVANVSGPN 191
            +H+    H    +PS + P      Y K+ + +L P  F  L    +L +  + +S   
Sbjct: 72  PNHTPESPHPLFINPSYHSPSNSPCVYDKFDSRKLDPVMFRKLQQVGYLPNLSSGIS--- 131

Query: 192 SQFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEV-PIAHHL 251
                 +QRQ  L + +   H Q       I++ EN   R+  Q    QY  + P   HL
Sbjct: 132 -----PAQRQHYLPHSQPLSHYQSPMTWRDIEE-ENFQ-RLKLQEE--QYLSINPHFLHL 191

Query: 252 EQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-GMNTVDAMR 311
           +  +  P      + R      ++F  +  D  + + K+ +P KIL RS   +NT   ++
Sbjct: 192 QSMDTVPRQDHFDYRRAEQSNRNLF-WNGEDGNESVRKMCYPEKILMRSQMDLNTAKVIK 251

Query: 312 FMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFN 371
           + + D  ++       R    N       +S  N                 L L P+++N
Sbjct: 252 YGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------LSLQPQKYN 311

Query: 372 SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQK 431
           S+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD FGNYLVQK
Sbjct: 312 SIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQK 371

Query: 432 LLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSG 491
           LLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +I+SALK G
Sbjct: 372 LLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHG 431

Query: 492 IVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDST 551
           IV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQKCL  S+  
Sbjct: 432 IVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGE 491

Query: 552 DRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSN 611
            + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +LSMQK SSN
Sbjct: 492 QKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 551

Query: 612 VVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIR 671
           VVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H  LV+AI+
Sbjct: 552 VVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIK 590

Query: 672 PHVPVLRMSPYGKKVLA 674
            ++  LR +PYGKKVL+
Sbjct: 612 LNISSLRTNPYGKKVLS 590

[Close]
BLAST of Csa1G599470 vs. Swiss-Prot
Match: PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-88
Identity = 158/320 (49.38%), Postives = 223/320 (69.69%), Query Frame = 1 

Query: 354 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 413
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 414 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 473
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 474 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 533
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 534 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 593
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 594 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 653
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 654 AIRPHVPVLRMSPYGKKVLA 674
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

[Close]
BLAST of Csa1G599470 vs. Swiss-Prot
Match: PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2)

HSP 1 Score: 323.9 bits (829), Expect = 4.1e-87
Identity = 154/313 (49.20%), Postives = 221/313 (70.61%), Query Frame = 1 

Query: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 661 VLRMSPYGKKVLA 674
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

[Close]
BLAST of Csa1G599470 vs. Swiss-Prot
Match: PUM11_ARATH (Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-76
Identity = 141/310 (45.48%), Postives = 212/310 (68.39%), Query Frame = 1 

Query: 364 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 423
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 424 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 483
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 484 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 543
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 544 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 603
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 604 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 663
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 664 MSPYGKKVLA 674
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

[Close]
BLAST of Csa1G599470 vs. Swiss-Prot
Match: PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 146/327 (44.65%), Postives = 212/327 (64.83%), Query Frame = 1 

Query: 350 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 409
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 410 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 469
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 470 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 529
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 530 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 589
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 590 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 649
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 650 LHTKLVEAIRPHVPVLRMSPYGKKVLA 674
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]
BLAST of Csa1G599470 vs. TrEMBL
Match: A0A0A0LX44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1)

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 1 

Query: 1   MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN 60
           MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN
Sbjct: 1   MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN 60

Query: 61  FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN 120
           FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN
Sbjct: 61  FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN 120

Query: 121 HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS 180
           HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS
Sbjct: 121 HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS 180

Query: 181 QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ 240
           QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ
Sbjct: 181 QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ 240

Query: 241 SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS 300
           SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS
Sbjct: 241 SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS 300

Query: 301 MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD 360
           MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD
Sbjct: 301 MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD 360

Query: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420
           EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE
Sbjct: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420

Query: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480
           VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT
Sbjct: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480

Query: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540
           LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD
Sbjct: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540

Query: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600
           NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE
Sbjct: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600

Query: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660
           KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP
Sbjct: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660

Query: 661 VLRMSPYGKKVLAIVGKSN 680
           VLRMSPYGKKVLAIVGKSN
Sbjct: 661 VLRMSPYGKKVLAIVGKSN 679

[Close]
BLAST of Csa1G599470 vs. TrEMBL
Match: U5GNJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.3e-156
Identity = 333/713 (46.70%), Postives = 434/713 (60.87%), Query Frame = 1 

Query: 18  ISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF 77
           +SV+S++G  +    SNG+L D  I  +  QQS   +  + +  +P DQSLT AF +L+F
Sbjct: 47  VSVNSFKGPFIEKLESNGSLDDRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSF 106

Query: 78  GDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLG 137
              S +  +KS  +   + Y++ ++  L N D S  AA  + S N+L +G    ++ ++ 
Sbjct: 107 NSGSPLANYKS--LPNPSVYTNTMNSSLSNTDSSTMAAPPYQSPNNLPSGFDKFNAVKVC 166

Query: 138 HQNSP-SRYIPEQYKKWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPIAS 197
           H+ S   ++   + KK  T   QP     F +  P  H       ++N++ P   FP+ S
Sbjct: 167 HEQSNFIKFDAREQKKVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNMAVPGMDFPLMS 226

Query: 198 QRQQVLHNGRRC---IHPQQLER-------------------LLPIQQHENIAGRISSQN 257
             QQ   + +     +H QQL R                    L +QQ  N   R+ +QN
Sbjct: 227 DHQQYFTDVQPSLPYVHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRN--QRLEAQN 286

Query: 258 RKPQYYE----------------VPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYM 317
                                  VP +H L+QSN E  W   A  RG NQ     S + +
Sbjct: 287 PTSANGNVETKLMSRNVRQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGI 346

Query: 318 DTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLS 377
             +  + K SFP KIL RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +
Sbjct: 347 RVLDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLST 406

Query: 378 TANECMCRDHSSA-------MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQR 437
               C   D  S+          +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQR
Sbjct: 407 PTAGCFQLDPLSSWNLSPDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQR 466

Query: 438 KFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGEL 497
            F EGT +D+EKIF EIID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GEL
Sbjct: 467 TFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGEL 526

Query: 498 VMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPS 557
           V ISCDMHGTRA+QKVIETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL YLMP 
Sbjct: 527 VRISCDMHGTRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPE 586

Query: 558 CRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNY 617
             E LF+A   +CV+LA DRHGCCVLQKCLS S    R  L++EIT NALI+SQD +GNY
Sbjct: 587 YSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGNY 646

Query: 618 VVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELIND 674
           VVQF+ +L L WA   IL QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ ELIN+
Sbjct: 647 VVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTRIIRELINN 706

[Close]
BLAST of Csa1G599470 vs. TrEMBL
Match: M5W697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 2.9e-148
Identity = 283/497 (56.94%), Postives = 352/497 (70.82%), Query Frame = 1 

Query: 199 IHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQ 258
           +H Q+LE    +Q   NIA R++  N +  ++EVPI+H LEQSN E         RG +Q
Sbjct: 282 LHDQRLEAQHLVQGSGNIASRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQ 341

Query: 259 LNSVFSTHYMDTVQGMEKV---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRF 318
            N   S   ++ +Q  +KV   SFP KIL RS GMNT+ A++F ++ AD+S  HV+    
Sbjct: 342 SNPALSYTDLNGIQVFDKVGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGK 401

Query: 319 LRPNSFFRPNNLSTANECMCRDHSSAMYSESPSL------------------KLVPERFN 378
           +  N  FR +  ST N    +  S + +   PSL                  K +P+++N
Sbjct: 402 VLSNGHFR-HTFSTQNTGCFQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYN 461

Query: 379 SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQK 438
           S+DE+ GRI+LMAKDQHGCRFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QK
Sbjct: 462 SMDEITGRIYLMAKDQHGCRFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQK 521

Query: 439 LLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSG 498
           LLEVC + Q+MQIL  IT+  GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK G
Sbjct: 522 LLEVCGEVQKMQILHSITKKPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPG 581

Query: 499 IVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDST 558
           IVTL+KN NGNHVAQ CL YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+ 
Sbjct: 582 IVTLIKNTNGNHVAQRCLQYLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAE 641

Query: 559 DRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSN 618
            R+ LI EIT NALI+SQD +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSN
Sbjct: 642 QRNRLICEITSNALILSQDPFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSN 701

Query: 619 VVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIR 674
           VVEK L++AG +   +IV ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+
Sbjct: 702 VVEKSLKYAGEERRVRIVQELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIK 761

[Close]
BLAST of Csa1G599470 vs. TrEMBL
Match: M5W697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-10
Identity = 66/266 (24.81%), Postives = 117/266 (43.98%), Query Frame = 1 

Query: 15  LSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEK 74
           LS I V+SY+       H+NG   +G  S+  +Q+S +         +P D+SLT AF  
Sbjct: 44  LSPICVNSYKRPLSDKLHTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAG 103

Query: 75  LNF---------GDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLT 134
           L+F           E   ++ ++ +  L     ++L   + + D  V    ++ + N+  
Sbjct: 104 LSFDGGVTVEAGSHEETCKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTP 163

Query: 135 NGVHDSHSTRLGHQNS-PSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVS 194
            G ++   T +G ++S  S++  E+ KK Q    QP E+LS    L H V      +NV 
Sbjct: 164 CGFYEFDVTNIGQESSNMSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVP 223

Query: 195 GPNSQFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQN-RKPQYYEVPIA 254
           GP  QFP+ S  QQ   + +         R+  ++  +    ++S +N  + QYY +   
Sbjct: 224 GPGLQFPLTSDPQQFFLDAQ--------SRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQR 283

Query: 255 HHLEQSNHEPTWKPSAFCRGSNQLNS 262
           +   Q  H+   +     +GS  + S
Sbjct: 284 YVYMQQLHDQRLEAQHLVQGSGNIAS 301


HSP 2 Score: 532.3 bits (1370), Expect = 8.4e-148
Identity = 273/483 (56.52%), Postives = 350/483 (72.46%), Query Frame = 1 

Query: 199 IHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQ 258
           +H Q+LE   P+Q + N+A ++ +++ +  Y+EVP++H L+Q N E  W   A  RG NQ
Sbjct: 258 LHNQRLEAQHPMQANGNVATKLMNRHVRQPYFEVPVSHQLQQPNQEQVWNDYAVTRGLNQ 317

Query: 259 LNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRP 318
                S + M+ +  + K SFP KIL RS G++T+ A+++ S   ++S  +++Q   +  
Sbjct: 318 -----SQNGMNILDEVGKQSFPEKILTRSQGLSTLKAVKYSSAGGNESLANLSQNGKVLL 377

Query: 319 NSFFRPNNLSTANECMCRDHSSA-------MYSESPSLKLVPERFNSVDEVRGRIFLMAK 378
           N   R      + EC   DH S+       +  +S +L+  P+++NSVDEV GR++LMAK
Sbjct: 378 NGHLRHTLTPPSAECFQLDHLSSWDLSPDIIDLKSTNLRPQPQKYNSVDEVTGRVYLMAK 437

Query: 379 DQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQIL 438
           DQHGCRFLQRKF EGT +DIEKIF E+ID + ELM D FGNYLVQKLLEVCN++QRMQIL
Sbjct: 438 DQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNEDQRMQIL 497

Query: 439 RRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVA 498
             IT+  GELV ISCDMHGTRA+QKVIETLKT +Q  M+VS+LK GIVTL+KN+NGNHVA
Sbjct: 498 CAITRKAGELVRISCDMHGTRAVQKVIETLKTPQQFSMVVSSLKPGIVTLIKNMNGNHVA 557

Query: 499 QHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNAL 558
           Q CL YL P   E LF+AA  +CV+LA DRHGCCVLQKCLS S+   R  LI+EIT NAL
Sbjct: 558 QRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLISEITSNAL 617

Query: 559 IISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-I 618
           I+SQD +GNYVVQF+ +L L WAT  IL QLEGNYGDLSMQKYSSNV+EKCL++A  +  
Sbjct: 618 ILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKCLKYASEEHR 677

Query: 619 TKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKK 674
             I+ +LI++   D++MQDPYGNY IQ AL+ ++G LH  LVEAIRPHVPVLR SPYGKK
Sbjct: 678 AHIIRQLISNTHLDQVMQDPYGNYVIQAALHQSKGALHAALVEAIRPHVPVLRTSPYGKK 735

[Close]
BLAST of Csa1G599470 vs. TrEMBL
Match: B9SBN7_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.5e-07
Identity = 59/207 (28.50%), Postives = 97/207 (46.86%), Query Frame = 1 

Query: 14  GLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFE 73
           GLS I ++S+EG       SNG+  +  + +S  Q+S +    + +  +P DQSLT AF 
Sbjct: 39  GLSPICMNSFEGRLTEKLQSNGSPNERKLLISKNQESPIKRVQSEEANLPDDQSLTSAFT 98

Query: 74  KLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLT--NGVHDSHS 133
            L+F   S    +KS             S +  +I  S+  A S    +    G  + ++
Sbjct: 99  DLSFNTGSGSTNFKS-------------SPKAPSISLSMTGAPSFRLPIAVPCGFDEFNA 158

Query: 134 TRLGHQNSP-SRYIPEQYKKWQTG--QLQPFESLSPNAHLTHEV------ANVSGPNSQF 193
           T++GH++S   ++   + K+   G  Q QP E+LS    L H V      +NV+ P   F
Sbjct: 159 TKVGHESSNLLKFNAHELKQIPAGYRQPQPIENLSSALPLAHGVQGFQFLSNVAVPGIDF 218

Query: 194 PIASQRQQV---LHNGRRCIHPQQLER 207
           P+ S ++Q    + +   CIH QQ  +
Sbjct: 219 PLMSDQRQYFADMQSVLPCIHAQQFNQ 232


HSP 2 Score: 529.6 bits (1363), Expect = 5.5e-147
Identity = 274/481 (56.96%), Postives = 350/481 (72.77%), Query Frame = 1 

Query: 202 QQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNS 261
           Q+LE   PIQ + N+  ++ ++N +  Y+E+PI+  L+QSN EP W   A  RG NQ   
Sbjct: 282 QRLEAQHPIQTNGNVVPKLMNRNVRQPYFEMPISRQLQQSNQEPFWNNYAATRGLNQ--- 341

Query: 262 VFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSF 321
             S + ++ +  + K SFP KIL RS G+NT+ A++F S+  +++  +VNQ   +  N  
Sbjct: 342 --SRNGINVLDKLGKQSFPEKILTRSQGLNTLKAVKFGSVGGNEALANVNQNGKVITNGN 401

Query: 322 FRPNNLSTANECMCRDHSSAMYSESP--------SLKLVPERFNSVDEVRGRIFLMAKDQ 381
            R +  + +  C   D+ + +++ SP        +L+  P+++NSVDEV GR++LMAKDQ
Sbjct: 402 LRHSLSTPSAGCFQLDNLN-LWNMSPDITDLKSDNLRPQPQKYNSVDEVTGRVYLMAKDQ 461

Query: 382 HGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRR 441
           HGCRFLQRKF EGT +D+EKIF E+ID +VELM D FGNYLVQKLLEVCN++QRM+IL  
Sbjct: 462 HGCRFLQRKFSEGTPQDVEKIFLEVIDHIVELMTDPFGNYLVQKLLEVCNEDQRMKILCA 521

Query: 442 ITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQH 501
           IT+  GELV ISCDMHGTRA+QKVIETL   EQ  M+VS+LKSGIVTL+KN+NGNHVAQ 
Sbjct: 522 ITRKPGELVRISCDMHGTRAVQKVIETLTAPEQFSMVVSSLKSGIVTLIKNMNGNHVAQR 581

Query: 502 CLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALII 561
           CL YL P   E LF+AA  +CV+LA DRHGCCVLQKCLS S+   R  LI EIT NALI+
Sbjct: 582 CLQYLTPEYSEFLFEAATANCVELATDRHGCCVLQKCLSHSEGEQRRRLICEITSNALIL 641

Query: 562 SQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAG-GQITK 621
           SQD +GNYVVQF+ +L L WAT  IL QL+GNYGDLSMQKYSSNVVEKCL++A   +   
Sbjct: 642 SQDPFGNYVVQFVFELRLPWATADILDQLDGNYGDLSMQKYSSNVVEKCLKYASEDRRAH 701

Query: 622 IVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVL 674
           ++ ELIN+   D++MQDPYGNY IQ AL+ T+GTLH  LVEAIRPH+P LR SPYGKKVL
Sbjct: 702 VIRELINNAHLDQVMQDPYGNYVIQAALHQTKGTLHVALVEAIRPHIPALRTSPYGKKVL 756

[Close]
BLAST of Csa1G599470 vs. TAIR10
Match: AT5G56510.1 (AT5G56510.1 pumilio 12)

HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-116
Identity = 259/617 (41.98%), Postives = 359/617 (58.18%), Query Frame = 1 

Query: 72  FEKLNFGDESKVRA---WKSRAILLENHYSDNLSKQLQNI-DPSVFAAWSSSNHLTNGVH 131
           FEKL  G+  KV +   +    I L +  S ++ K  Q + D   F    S  +L  G+ 
Sbjct: 12  FEKL-LGEIPKVTSGNDYNHFPICLSSSRSQSIKKVDQYLPDDRAFTTSFSEANLHFGI- 71

Query: 132 DSHSTRLGHQN--SPSRYIPEQ----YKKWQTGQLQP--FESLSPNAHLTHEVANVSGPN 191
            +H+    H    +PS + P      Y K+ + +L P  F  L    +L +  + +S   
Sbjct: 72  PNHTPESPHPLFINPSYHSPSNSPCVYDKFDSRKLDPVMFRKLQQVGYLPNLSSGIS--- 131

Query: 192 SQFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEV-PIAHHL 251
                 +QRQ  L + +   H Q       I++ EN   R+  Q    QY  + P   HL
Sbjct: 132 -----PAQRQHYLPHSQPLSHYQSPMTWRDIEE-ENFQ-RLKLQEE--QYLSINPHFLHL 191

Query: 252 EQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-GMNTVDAMR 311
           +  +  P      + R      ++F  +  D  + + K+ +P KIL RS   +NT   ++
Sbjct: 192 QSMDTVPRQDHFDYRRAEQSNRNLF-WNGEDGNESVRKMCYPEKILMRSQMDLNTAKVIK 251

Query: 312 FMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFN 371
           + + D  ++       R    N       +S  N                 L L P+++N
Sbjct: 252 YGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------LSLQPQKYN 311

Query: 372 SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQK 431
           S+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD FGNYLVQK
Sbjct: 312 SIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQK 371

Query: 432 LLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSG 491
           LLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +I+SALK G
Sbjct: 372 LLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHG 431

Query: 492 IVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDST 551
           IV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQKCL  S+  
Sbjct: 432 IVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGE 491

Query: 552 DRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSN 611
            + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +LSMQK SSN
Sbjct: 492 QKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 551

Query: 612 VVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIR 671
           VVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H  LV+AI+
Sbjct: 552 VVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIK 590

Query: 672 PHVPVLRMSPYGKKVLA 674
            ++  LR +PYGKKVL+
Sbjct: 612 LNISSLRTNPYGKKVLS 590

[Close]
BLAST of Csa1G599470 vs. TAIR10
Match: AT1G22240.1 (AT1G22240.1 pumilio 8)

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-89
Identity = 158/320 (49.38%), Postives = 223/320 (69.69%), Query Frame = 1 

Query: 354 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 413
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 414 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 473
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 474 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 533
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 534 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 593
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 594 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 653
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 654 AIRPHVPVLRMSPYGKKVLA 674
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

[Close]
BLAST of Csa1G599470 vs. TAIR10
Match: AT1G78160.1 (AT1G78160.1 pumilio 7)

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-88
Identity = 154/313 (49.20%), Postives = 221/313 (70.61%), Query Frame = 1 

Query: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 661 VLRMSPYGKKVLA 674
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

[Close]
BLAST of Csa1G599470 vs. TAIR10
Match: AT4G08840.1 (AT4G08840.1 pumilio 11)

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-77
Identity = 141/310 (45.48%), Postives = 212/310 (68.39%), Query Frame = 1 

Query: 364 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 423
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 424 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 483
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 484 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 543
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 544 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 603
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 604 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 663
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 664 MSPYGKKVLA 674
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

[Close]
BLAST of Csa1G599470 vs. TAIR10
Match: AT1G35730.1 (AT1G35730.1 pumilio 9)

HSP 1 Score: 275.8 bits (704), Expect = 7.2e-74
Identity = 146/327 (44.65%), Postives = 212/327 (64.83%), Query Frame = 1 

Query: 350 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 409
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 410 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 469
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 470 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 529
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 530 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 589
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 590 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 649
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 650 LHTKLVEAIRPHVPVLRMSPYGKKVLA 674
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]
BLAST of Csa1G599470 vs. NCBI nr
Match: gi|778663304|ref|XP_004144136.2| (PREDICTED: pumilio homolog 12-like [Cucumis sativus])

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 1 

Query: 1   MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN 60
           MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN
Sbjct: 1   MENVTLQIHADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQN 60

Query: 61  FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN 120
           FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN
Sbjct: 61  FVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSN 120

Query: 121 HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS 180
           HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS
Sbjct: 121 HLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNS 180

Query: 181 QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ 240
           QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ
Sbjct: 181 QFPIASQRQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQ 240

Query: 241 SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS 300
           SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS
Sbjct: 241 SNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMS 300

Query: 301 MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD 360
           MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD
Sbjct: 301 MDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVD 360

Query: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420
           EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE
Sbjct: 361 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 420

Query: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480
           VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT
Sbjct: 421 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 480

Query: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540
           LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD
Sbjct: 481 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 540

Query: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600
           NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE
Sbjct: 541 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 600

Query: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660
           KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP
Sbjct: 601 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 660

Query: 661 VLRMSPYGKKVLAIVGKSN 680
           VLRMSPYGKKVLAIVGKSN
Sbjct: 661 VLRMSPYGKKVLAIVGKSN 679

[Close]
BLAST of Csa1G599470 vs. NCBI nr
Match: gi|659100267|ref|XP_008451010.1| (PREDICTED: pumilio homolog 12-like [Cucumis melo])

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 615/714 (86.13%), Postives = 638/714 (89.36%), Query Frame = 1 

Query: 1   MENVTLQIHADPEG-LSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQ 60
           MENVTLQIHADPEG L SISVSSYEGSSMRD+HSNG+LMDGNISMSTLQQSSMDHTSTRQ
Sbjct: 1   MENVTLQIHADPEGCLLSISVSSYEGSSMRDFHSNGHLMDGNISMSTLQQSSMDHTSTRQ 60

Query: 61  NFVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSS 120
           N V GDQSLTRAFEKLNFGDESK RAW+SRA L E+HYSDNLSKQLQNIDPSVFAAWS S
Sbjct: 61  NSVSGDQSLTRAFEKLNFGDESKGRAWRSRAFLFEDHYSDNLSKQLQNIDPSVFAAWSPS 120

Query: 121 NHLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPN 180
           +HLTNGVHD HSTRLGHQN PSRYIPEQYKKWQ GQLQPFESLSPNAHLT EV NVS PN
Sbjct: 121 SHLTNGVHDPHSTRLGHQNPPSRYIPEQYKKWQLGQLQPFESLSPNAHLTQEVVNVSAPN 180

Query: 181 SQFPIASQRQQVLHNGRRCIHPQQL------------ERLLPIQQHENIAGRISSQNRK- 240
           SQFPIASQRQQVLHNGRR IHPQQ+            ++L  + +       + +Q  + 
Sbjct: 181 SQFPIASQRQQVLHNGRR-IHPQQMNHRQAGWNYAEEDQLFRMHEQHPYLQHLHNQQLER 240

Query: 241 ----PQYYEVP----------------IAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTH 300
                Q+  +                 IAHHLEQSN+EP+WK SAF RGSNQLNSVFSTH
Sbjct: 241 LLPIQQHENIANRISSQNRKPQYFEVPIAHHLEQSNYEPSWKASAFRRGSNQLNSVFSTH 300

Query: 301 YMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNN 360
           YMDT+QGMEKVSFPRKILGRSPG+NTVDAMRFMS+D DKSSNHVNQ RFLRPNS FRPN+
Sbjct: 301 YMDTIQGMEKVSFPRKILGRSPGLNTVDAMRFMSIDGDKSSNHVNQSRFLRPNSCFRPNH 360

Query: 361 LSTANECMCRDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEG 420
           LSTANECMCRDHS AMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEG
Sbjct: 361 LSTANECMCRDHSPAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEG 420

Query: 421 TDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISC 480
           TDEDIEKIF EIID VV+LM+DAFGNYLVQKLLEVCNDNQRMQIL RITQNHGELVMISC
Sbjct: 421 TDEDIEKIFNEIIDHVVDLMVDAFGNYLVQKLLEVCNDNQRMQILCRITQNHGELVMISC 480

Query: 481 DMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELL 540
           DMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELL
Sbjct: 481 DMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELL 540

Query: 541 FDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFI 600
           FDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFI
Sbjct: 541 FDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFI 600

Query: 601 LKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELINDPRFDK 660
           LKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFA G QITKIVLELINDPRFDK
Sbjct: 601 LKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFADGVQITKIVLELINDPRFDK 660

Query: 661 IMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 680
           IMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 661 IMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 713

[Close]
BLAST of Csa1G599470 vs. NCBI nr
Match: gi|743909377|ref|XP_011048167.1| (PREDICTED: pumilio homolog 12-like isoform X2 [Populus euphratica])

HSP 1 Score: 572.8 bits (1475), Expect = 8.1e-160
Identity = 336/711 (47.26%), Postives = 437/711 (61.46%), Query Frame = 1 

Query: 18  ISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF 77
           ISV+S++GS +    S G+L    I  +  QQS   +  + +  +P DQSLT AF +L+F
Sbjct: 47  ISVNSFKGSFIEKLESYGSLDCRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSF 106

Query: 78  GDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLG 137
              S +  +KS  +   + Y++ ++  L N D S  A   + S N+L +G    ++ ++ 
Sbjct: 107 NSGSPLANYKS--LPNPSVYTNTMNSSLSNTDSSTMAVPPYQSPNNLPSGFDKFNAVKVC 166

Query: 138 HQNSP-SRYIPEQYKKWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPIAS 197
           H+ S   ++   + KK  T   QP     F +  P  H       ++NV+ P   FP+ S
Sbjct: 167 HEQSNFVKFDAREQKKVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNVAVPGMDFPLMS 226

Query: 198 QRQQV---LHNGRRCIHPQQLER-------------------LLPIQQHEN--------- 257
             QQ    + +    IH QQL R                    L +QQ  N         
Sbjct: 227 DHQQYFTDVQSSLPYIHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRNQRLEAQNPT 286

Query: 258 -----IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDT 317
                +  ++ S+N +  Y EVP +H L+QSN E  W   A  RG NQ     S + +  
Sbjct: 287 PANGNVETKLMSRNVRQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGIRV 346

Query: 318 VQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTA 377
           +  + K SFP KIL RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +  
Sbjct: 347 LDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLSTPT 406

Query: 378 NECMCRDHSSA-------MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKF 437
             C   D  S+          +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQRKF
Sbjct: 407 AGCFQLDPLSSWNLSPDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRKF 466

Query: 438 MEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVM 497
            EGT +D+EKIF EIID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GELV 
Sbjct: 467 SEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVR 526

Query: 498 ISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCR 557
           ISCDMHGTRA+QKVIETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL YLMP   
Sbjct: 527 ISCDMHGTRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPEYS 586

Query: 558 ELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVV 617
           E LF+A   +CV+LA DRHGCCVLQKCLS S    R  L++EIT NALI+SQD +GNYVV
Sbjct: 587 EFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGNYVV 646

Query: 618 QFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELINDPR 674
           QF+ +L L WA   IL QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ ELIN+ R
Sbjct: 647 QFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRCTRIIQELINNSR 706

[Close]
BLAST of Csa1G599470 vs. NCBI nr
Match: gi|743909372|ref|XP_011048164.1| (PREDICTED: pumilio homolog 12-like isoform X1 [Populus euphratica])

HSP 1 Score: 565.8 bits (1457), Expect = 9.9e-158
Identity = 336/718 (46.80%), Postives = 437/718 (60.86%), Query Frame = 1 

Query: 18  ISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF 77
           ISV+S++GS +    S G+L    I  +  QQS   +  + +  +P DQSLT AF +L+F
Sbjct: 47  ISVNSFKGSFIEKLESYGSLDCRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSF 106

Query: 78  GDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLG 137
              S +  +KS  +   + Y++ ++  L N D S  A   + S N+L +G    ++ ++ 
Sbjct: 107 NSGSPLANYKS--LPNPSVYTNTMNSSLSNTDSSTMAVPPYQSPNNLPSGFDKFNAVKVC 166

Query: 138 HQNSP-SRYIPEQYKKWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPIAS 197
           H+ S   ++   + KK  T   QP     F +  P  H       ++NV+ P   FP+ S
Sbjct: 167 HEQSNFVKFDAREQKKVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNVAVPGMDFPLMS 226

Query: 198 QRQQV---LHNGRRCIHPQQLER-------------------LLPIQQHEN--------- 257
             QQ    + +    IH QQL R                    L +QQ  N         
Sbjct: 227 DHQQYFTDVQSSLPYIHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRNQRLEAQNPT 286

Query: 258 -----IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDT 317
                +  ++ S+N +  Y EVP +H L+QSN E  W   A  RG NQ     S + +  
Sbjct: 287 PANGNVETKLMSRNVRQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGIRV 346

Query: 318 VQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTA 377
           +  + K SFP KIL RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +  
Sbjct: 347 LDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLSTPT 406

Query: 378 NECMCRDHSSA-------MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKF 437
             C   D  S+          +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQRKF
Sbjct: 407 AGCFQLDPLSSWNLSPDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRKF 466

Query: 438 MEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVM 497
            EGT +D+EKIF EIID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GELV 
Sbjct: 467 SEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVR 526

Query: 498 ISCDMHG-------TRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 557
           ISCDMHG       TRA+QKVIETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL 
Sbjct: 527 ISCDMHGFALCLYMTRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQ 586

Query: 558 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 617
           YLMP   E LF+A   +CV+LA DRHGCCVLQKCLS S    R  L++EIT NALI+SQD
Sbjct: 587 YLMPEYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQD 646

Query: 618 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVL 674
            +GNYVVQF+ +L L WA   IL QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ 
Sbjct: 647 PFGNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRCTRIIQ 706

[Close]
BLAST of Csa1G599470 vs. NCBI nr
Match: gi|566147109|ref|XP_006368531.1| (hypothetical protein POPTR_0001s03990g [Populus trichocarpa])

HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156
Identity = 333/713 (46.70%), Postives = 434/713 (60.87%), Query Frame = 1 

Query: 18  ISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF 77
           +SV+S++G  +    SNG+L D  I  +  QQS   +  + +  +P DQSLT AF +L+F
Sbjct: 47  VSVNSFKGPFIEKLESNGSLDDRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSF 106

Query: 78  GDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLG 137
              S +  +KS  +   + Y++ ++  L N D S  AA  + S N+L +G    ++ ++ 
Sbjct: 107 NSGSPLANYKS--LPNPSVYTNTMNSSLSNTDSSTMAAPPYQSPNNLPSGFDKFNAVKVC 166

Query: 138 HQNSP-SRYIPEQYKKWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPIAS 197
           H+ S   ++   + KK  T   QP     F +  P  H       ++N++ P   FP+ S
Sbjct: 167 HEQSNFIKFDAREQKKVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNMAVPGMDFPLMS 226

Query: 198 QRQQVLHNGRRC---IHPQQLER-------------------LLPIQQHENIAGRISSQN 257
             QQ   + +     +H QQL R                    L +QQ  N   R+ +QN
Sbjct: 227 DHQQYFTDVQPSLPYVHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRN--QRLEAQN 286

Query: 258 RKPQYYE----------------VPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYM 317
                                  VP +H L+QSN E  W   A  RG NQ     S + +
Sbjct: 287 PTSANGNVETKLMSRNVRQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGI 346

Query: 318 DTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLS 377
             +  + K SFP KIL RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +
Sbjct: 347 RVLDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLST 406

Query: 378 TANECMCRDHSSA-------MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQR 437
               C   D  S+          +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQR
Sbjct: 407 PTAGCFQLDPLSSWNLSPDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQR 466

Query: 438 KFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGEL 497
            F EGT +D+EKIF EIID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GEL
Sbjct: 467 TFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGEL 526

Query: 498 VMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPS 557
           V ISCDMHGTRA+QKVIETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL YLMP 
Sbjct: 527 VRISCDMHGTRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPE 586

Query: 558 CRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNY 617
             E LF+A   +CV+LA DRHGCCVLQKCLS S    R  L++EIT NALI+SQD +GNY
Sbjct: 587 YSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGNY 646

Query: 618 VVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELIND 674
           VVQF+ +L L WA   IL QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ ELIN+
Sbjct: 647 VVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTRIIRELINN 706

The following BLAST results are available for this feature:
BLAST of Csa1G599470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUM12_ARATH3.6e-11541.98Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2[more]
PUM8_ARATH2.8e-8849.38Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 ... [more]
PUM7_ARATH4.1e-8749.20Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 ... [more]
PUM11_ARATH2.5e-7645.48Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2[more]
PUM9_ARATH1.3e-7244.65Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1[more]
BLAST of Csa1G599470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX44_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1[more]
U5GNJ8_POPTR1.3e-15646.70Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1[more]
M5W697_PRUPE2.9e-14856.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1[more]
M5W697_PRUPE3.7e-1024.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1[more]
B9SBN7_RICCO6.5e-0728.50RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1[more]
BLAST of Csa1G599470 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G56510.12.0e-11641.98 pumilio 12[more]
AT1G22240.11.6e-8949.38 pumilio 8[more]
AT1G78160.12.3e-8849.20 pumilio 7[more]
AT4G08840.11.4e-7745.48 pumilio 11[more]
AT1G35730.17.2e-7444.65 pumilio 9[more]
BLAST of Csa1G599470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663304|ref|XP_004144136.2|0.0e+00100.00PREDICTED: pumilio homolog 12-like [Cucumis sativus][more]
gi|659100267|ref|XP_008451010.1|0.0e+0086.13PREDICTED: pumilio homolog 12-like [Cucumis melo][more]
gi|743909377|ref|XP_011048167.1|8.1e-16047.26PREDICTED: pumilio homolog 12-like isoform X2 [Populus euphratica][more]
gi|743909372|ref|XP_011048164.1|9.9e-15846.80PREDICTED: pumilio homolog 12-like isoform X1 [Populus euphratica][more]
gi|566147109|ref|XP_006368531.1|1.9e-15646.70hypothetical protein POPTR_0001s03990g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR016024ARM-type_fold
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005488binding
GO:0003723RNA binding
GO:0005488binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0005488 binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU135856cucumber EST collection version 3.0transcribed_cluster
CU151906cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G599470.1Csa1G599470.1mRNA
Csa1G599470.2Csa1G599470.2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU151906CU151906transcribed_cluster
CU135856CU135856transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 370..404
score: 2.4E-8coord: 521..541
score: 6.3E-4coord: 485..516
score: 3.2E-7coord: 593..614
score: 4.0E-4coord: 412..443
score: 2.
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 446..481
score: 0.0025coord: 334..369
score: 1.0E-4coord: 518..553
score: 0.42coord: 482..517
score: 5.8E-6coord: 409..445
score: 0.0066coord: 370..405
score: 9.7E-9coord: 554..588
score: 1.4coord: 591..626
score:
IPR001313Pumilio RNA-binding repeatPROFILEPS50302PUMcoord: 589..626
score: 8.594coord: 477..517
score: 9.83coord: 446..469
score: 5.421coord: 334..369
score: 8.711coord: 518..553
score: 9.061coord: 370..405
score: 12.49coord: 554..577
score: 5.934coord: 406..445
score: 9
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 332..650
score: 1.3E
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 331..649
score: 5.08E
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 301..648
score: 1.4E-177coord: 1..21
score: 1.4E
NoneNo IPR availablePANTHERPTHR12537:SF13SUPPRESSOR PROTEIN MPT5coord: 1..21
score: 1.4E-177coord: 301..648
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G599470Cp4.1LG18g02710Cucurbita pepo (Zucchini)cpecuB362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G599470Cucurbita maxima (Rimu)cmacuB085
Csa1G599470Cucurbita moschata (Rifu)cmocuB075
Csa1G599470Melon (DHL92) v3.5.1cumeB041
Csa1G599470Watermelon (Charleston Gray)cuwcgB046
Csa1G599470Watermelon (97103) v1cuwmB020
Csa1G599470Cucurbita pepo (Zucchini)cpecuB652
Csa1G599470Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G599470Cucumber (Gy14) v2cgybcuB002
Csa1G599470Melon (DHL92) v3.6.1cumedB033
Csa1G599470Silver-seed gourdcarcuB0528
Csa1G599470Watermelon (97103) v2cuwmbB042
Csa1G599470Wax gourdcuwgoB094
Csa1G599470Cucumber (Gy14) v1cgycuB205