CsGy6G014190 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G014190
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionhypothetical protein
LocationChr6 : 12535532 .. 12535759 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGAAGAGGGATTTTTTTGGGAAGAGCTGCGGCGGAGATTATCTGACGGAGACTTTCCGGCGGAGGAGGAAGGGGTGTGTTGTTTTTGGGATAAGCTTCTTAGTAATGGTAATTTTGCGGAAGTGCTTCTTGTGGAACCGCTTCTTGAAAATATTGATTTGGAGGAGGAGGATGATGAAGATGATTCTTTTTTTGAAACTTTCCATTTTTCTTCCATGTAA

mRNA sequence

ATGGATGAAGAAGAGGGATTTTTTTGGGAAGAGCTGCGGCGGAGATTATCTGACGGAGACTTTCCGGCGGAGGAGGAAGGGGTGTGTTGTTTTTGGGATAAGCTTCTTAGTAATGGTAATTTTGCGGAAGTGCTTCTTGTGGAACCGCTTCTTGAAAATATTGATTTGGAGGAGGAGGATGATGAAGATGATTCTTTTTTTGAAACTTTCCATTTTTCTTCCATGTAA

Coding sequence (CDS)

ATGGATGAAGAAGAGGGATTTTTTTGGGAAGAGCTGCGGCGGAGATTATCTGACGGAGACTTTCCGGCGGAGGAGGAAGGGGTGTGTTGTTTTTGGGATAAGCTTCTTAGTAATGGTAATTTTGCGGAAGTGCTTCTTGTGGAACCGCTTCTTGAAAATATTGATTTGGAGGAGGAGGATGATGAAGATGATTCTTTTTTTGAAACTTTCCATTTTTCTTCCATGTAA

Protein sequence

MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEEDDEDDSFFETFHFSSM
Homology
[Close]
BLAST of CsGy6G014190 vs. NCBI nr
Match: KGN47135.1 (hypothetical protein Csa_6G190260 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60
          MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED
Sbjct: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60

Query: 61 DEDDSFFETFHFSSM 76
          DEDDSFFETFHFSS+
Sbjct: 61 DEDDSFFETFHFSSI 75

[Close]
BLAST of CsGy6G014190 vs. TAIR10
Match: AT1G07485.1 (unknown protein)

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-05
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 24 EEEGVCCFWDKLLSN-GNFAEVLLVEPLLENIDLEE-EDDEDD----SFFETFHFSSM 76
          E+EG     D+L +N G F E  LVE LLEN+DL+E E+DE D    SFF++ HFSS+
Sbjct: 30 EDEGTEHLVDELRTNAGAFEEEALVEKLLENLDLDEVEEDEHDAANASFFDSLHFSSI 87

[Close]
BLAST of CsGy6G014190 vs. TrEMBL
Match: tr|A0A0A0KBR3|A0A0A0KBR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190260 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60
          MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED
Sbjct: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60

Query: 61 DEDDSFFETFHFSSM 76
          DEDDSFFETFHFSS+
Sbjct: 61 DEDDSFFETFHFSSI 75

The following BLAST results are available for this feature:
BLAST of CsGy6G014190 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47135.11.7e-3598.67hypothetical protein Csa_6G190260 [Cucumis sativus][more]
BLAST of CsGy6G014190 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07485.11.7e-0551.72unknown protein[more]
BLAST of CsGy6G014190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G014190 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBR3|A0A0A0KBR3_CUCSA1.1e-3598.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190260 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G014190.1CsGy6G014190.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G014190Csa6G190260Cucumber (Chinese Long) v2cgybcuB282
CsGy6G014190ClCG02G019990Watermelon (Charleston Gray)cgybwcgB402
CsGy6G014190CsaV3_6G016690Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G014190Cucurbita maxima (Rimu)cgybcmaB789
CsGy6G014190Cucurbita maxima (Rimu)cgybcmaB808
CsGy6G014190Cucurbita maxima (Rimu)cgybcmaB834
CsGy6G014190Cucurbita maxima (Rimu)cgybcmaB855
CsGy6G014190Cucurbita moschata (Rifu)cgybcmoB716
CsGy6G014190Cucurbita moschata (Rifu)cgybcmoB768
CsGy6G014190Cucurbita moschata (Rifu)cgybcmoB788
CsGy6G014190Cucurbita moschata (Rifu)cgybcmoB814
CsGy6G014190Cucurbita moschata (Rifu)cgybcmoB838
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB767
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB795
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB796
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB818
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB830
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB855
CsGy6G014190Cucurbita pepo (Zucchini)cgybcpeB893
CsGy6G014190Cucumber (Chinese Long) v2cgybcuB262
CsGy6G014190Cucumber (Chinese Long) v2cgybcuB279
CsGy6G014190Bottle gourd (USVL1VR-Ls)cgyblsiB378
CsGy6G014190Bottle gourd (USVL1VR-Ls)cgyblsiB416
CsGy6G014190Bottle gourd (USVL1VR-Ls)cgyblsiB426
CsGy6G014190Melon (DHL92) v3.5.1cgybmeB364
CsGy6G014190Melon (DHL92) v3.5.1cgybmeB380
CsGy6G014190Melon (DHL92) v3.5.1cgybmeB429
CsGy6G014190Melon (DHL92) v3.6.1cgybmedB365
CsGy6G014190Melon (DHL92) v3.6.1cgybmedB382
CsGy6G014190Melon (DHL92) v3.6.1cgybmedB423
CsGy6G014190Watermelon (Charleston Gray)cgybwcgB396
CsGy6G014190Watermelon (Charleston Gray)cgybwcgB453
CsGy6G014190Watermelon (97103) v1cgybwmB426
CsGy6G014190Watermelon (97103) v1cgybwmB457
CsGy6G014190Watermelon (97103) v1cgybwmB479
CsGy6G014190Wild cucumber (PI 183967)cgybcpiB285
CsGy6G014190Wild cucumber (PI 183967)cgybcpiB288
CsGy6G014190Silver-seed gourdcarcgybB0099
CsGy6G014190Silver-seed gourdcarcgybB0176
CsGy6G014190Silver-seed gourdcarcgybB0391
CsGy6G014190Silver-seed gourdcarcgybB0350
CsGy6G014190Silver-seed gourdcarcgybB0987
CsGy6G014190Cucumber (Chinese Long) v3cgybcucB274
CsGy6G014190Cucumber (Chinese Long) v3cgybcucB296
CsGy6G014190Watermelon (97103) v2cgybwmbB401
CsGy6G014190Watermelon (97103) v2cgybwmbB407
CsGy6G014190Watermelon (97103) v2cgybwmbB462
CsGy6G014190Wax gourdcgybwgoB508
CsGy6G014190Wax gourdcgybwgoB578
CsGy6G014190Cucumber (Gy14) v2cgybcgybB149
CsGy6G014190Cucurbita maxima (Rimu)cgybcmaB735