CsGy5G030020 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G030020
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	LOW QUALITY PROTEIN: TMV resistance protein N-like
Location	Chr5 : 33180607 .. 33182091 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGATATCAACTCCAATATTTCACAATCATTCTCATATCAATTGGAATTTGATGAGTATCCATTGGGGCGTCCATCAATTATTCGTCTGCATGATGGAGCCTTCAGTGATGACTCTCGTCAATTATGGGTTTCCTACGAGCCTCGTGAAGTTTACCCTTATAGGTTAAATAAATGGAGAAACCTTCGTGTTTCTTTTCTACCAAGTTGCTCACAAACAAAGGTAATGATGGAATTCCTTGAATTCGATATGTGACGCTCAAGTTATTTACGTATTTGTCATCTCTACGTCATTTACATTTATGATCTTTTATTTTTTGATCTTCTGTCGATTCTTAACAGGTAATATTATGTGGTGCACGTCTTCTTTACAAGGAAGATTTGGATGAGTTTGTAGACACTATTATTGACAGTGTATTGGGTTGCTCCATAAACCTTCATGAGTTTTATGATGGAGTGTTTTTAAACGGTATGTTGAGTTTGATAAGATCACAAAAGTATGATCCAAATATCGAGGAGGAAGAGGAGGAAGAGGAGGACGAGGACGAGGCTTTGATGGAAACTAAAGGAGGAAATTATGCTTCCACATCTAGCAGTTCTCTTGTATCAACAACAAAAGGCCGTCTTGATGATAGCAATGATTACTACTATAAACTCAAGCAATGCCTTCATGTTTTCTTCCAAAGGAGTTTACAGGTTCTCTCTCTTTTTATCTCTCTCATGCATTTTAATTTTCGAGCAAACTACAAAAATTACTCCTAAAATGTATGATAGCCGTAGTTGCAATAATTATAAAAACTCAACCTGAAATGTTTTATGGTATATGTGCATTAAAAGGATTTCTGATCATTTGTTTAATTAATTATCCCTTCATATAGAACCGTTACAACACCGCGTTCGATTTTATCGTACGGGGACATGGCGTTCCACAACTATTCTCCCACCAACCGGAGAGAAATAGAGCAAGTATTCAACTTCCCCCCACATTATAATTATATACAAACAATGTTTGGATTGGGTTTGTTGTTTGCACACTTCTATATGTCAACAAAAATCCAACTGCTATCTACAACAACCTTGGTTCAAGGATGCCTCATGACCTTATGTGCCAATTTGAAATTGAGCAAGGCCTTCTAAAACCACTTCATATTCACACCACAATGGAGAACAAATGGTTGTGGTTGGATGAAAGACAATTTGTTTGGTTGTACTATACGCCACGAAGAACATTTGGTAACATTTTGCGTCATTGCTCGTATATCCGTGCTATTATTGAAGCTGATAGTCCTGAACTGGCCGTTCGTCAATGTGGAATTTATCTTCTACATAATCAAGATAGGGAGAAGATTGATCAGATATTAATAGAATCGTTACCAACAAGAAGCATCTAAGTATATACTATAATTCTCAGTTATTATTGATGAAGAAAATTATTGATATTGCAATGATATAAGCTTTGGGTTGTGATTTACATGATATGCAAAAC

mRNA sequence

AGTGATATCAACTCCAATATTTCACAATCATTCTCATATCAATTGGAATTTGATGAGTATCCATTGGGGCGTCCATCAATTATTCGTCTGCATGATGGAGCCTTCAGTGATGACTCTCGTCAATTATGGGTTTCCTACGAGCCTCGTGAAGTTTACCCTTATAGGTTAAATAAATGGAGAAACCTTCGTGTTTCTTTTCTACCAAGTTGCTCACAAACAAAGGTAATATTATGTGGTGCACGTCTTCTTTACAAGGAAGATTTGGATGAGTTTGTAGACACTATTATTGACAGTGTATTGGGTTGCTCCATAAACCTTCATGAGTTTTATGATGGAGTGTTTTTAAACGGTATGTTGAGTTTGATAAGATCACAAAAGTATGATCCAAATATCGAGGAGGAAGAGGAGGAAGAGGAGGACGAGGACGAGGCTTTGATGGAAACTAAAGGAGGAAATTATGCTTCCACATCTAGCAGTTCTCTTGTATCAACAACAAAAGGCCGTCTTGATGATAGCAATGATTACTACTATAAACTCAAGCAATGCCTTCATGTTTTCTTCCAAAGGAGTTTACAGAACCGTTACAACACCGCGTTCGATTTTATCGTACGGGGACATGGCGTTCCACAACTATTCTCCCACCAACCGGAGAGAAATAGAGCAAGTATTCAACTTCCCCCCACATTATAATTATATACAAACAATGTTTGGATTGGGTTTGTTGTTTGCACACTTCTATATGTCAACAAAAATCCAACTGCTATCTACAACAACCTTGGTTCAAGGATGCCTCATGACCTTATGTGCCAATTTGAAATTGAGCAAGGCCTTCTAAAACCACTTCATATTCACACCACAATGGAGAACAAATGGTTGTGGTTGGATGAAAGACAATTTGTTTGGTTGTACTATACGCCACGAAGAACATTTGGTAACATTTTGCGTCATTGCTCGTATATCCGTGCTATTATTGAAGCTGATAGTCCTGAACTGGCCGTTCGTCAATGTGGAATTTATCTTCTACATAATCAAGATAGGGAGAAGATTGATCAGATATTAATAGAATCGTTACCAACAAGAAGCATCTAAGTATATACTATAATTCTCAGTTATTATTGATGAAGAAAATTATTGATATTGCAATGATATAAGCTTTGGGTTGTGATTTACATGATATGCAAAAC

Coding sequence (CDS)

AGTGATATCAACTCCAATATTTCACAATCATTCTCATATCAATTGGAATTTGATGAGTATCCATTGGGGCGTCCATCAATTATTCGTCTGCATGATGGAGCCTTCAGTGATGACTCTCGTCAATTATGGGTTTCCTACGAGCCTCGTGAAGTTTACCCTTATAGGTTAAATAAATGGAGAAACCTTCGTGTTTCTTTTCTACCAAGTTGCTCACAAACAAAGGTAATATTATGTGGTGCACGTCTTCTTTACAAGGAAGATTTGGATGAGTTTGTAGACACTATTATTGACAGTGTATTGGGTTGCTCCATAAACCTTCATGAGTTTTATGATGGAGTGTTTTTAAACGGTATGTTGAGTTTGATAAGATCACAAAAGTATGATCCAAATATCGAGGAGGAAGAGGAGGAAGAGGAGGACGAGGACGAGGCTTTGATGGAAACTAAAGGAGGAAATTATGCTTCCACATCTAGCAGTTCTCTTGTATCAACAACAAAAGGCCGTCTTGATGATAGCAATGATTACTACTATAAACTCAAGCAATGCCTTCATGTTTTCTTCCAAAGGAGTTTACAGAACCGTTACAACACCGCGTTCGATTTTATCGTACGGGGACATGGCGTTCCACAACTATTCTCCCACCAACCGGAGAGAAATAGAGCAAGTATTCAACTTCCCCCCACATTATAA

Protein sequence

SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRNLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLSLIRSQKYDPNIEEEEEEEEDEDEALMETKGGNYASTSSSSLVSTTKGRLDDSNDYYYKLKQCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL

Homology

[Close]

BLAST of CsGy5G030020 vs. NCBI nr
Match: KGN52638.1 (hypothetical protein Csa_5G647610 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 60
           SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR
Sbjct: 70  SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 129

Query: 61  NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 120
           NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS
Sbjct: 130 NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 189

Query: 121 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 180
           LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK
Sbjct: 190 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 249

Query: 181 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
           QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL
Sbjct: 250 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 298

[Close]

BLAST of CsGy5G030020 vs. NCBI nr
Match: XP_011656066.1 (PREDICTED: uncharacterized protein LOC105435622 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 60
           SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR
Sbjct: 11  SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 70

Query: 61  NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 120
           NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS
Sbjct: 71  NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 130

Query: 121 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 180
           LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK
Sbjct: 131 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 190

Query: 181 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
           QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL
Sbjct: 191 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 239

[Close]

BLAST of CsGy5G030020 vs. NCBI nr
Match: XP_008459548.2 (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91
Identity = 174/229 (75.98%), Postives = 180/229 (78.60%), Query Frame = 0


Query: 1    SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 60
            SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFS+DSRQLWVS+EPREVYPYRLNKWR
Sbjct: 1151 SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSNDSRQLWVSFEPREVYPYRLNKWR 1210

Query: 61   NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 120
            NLRVSFLPSCSQTKVILCGARLLY+EDLDEFVDTIIDSVLGCSINLHEFYDGVFLN MLS
Sbjct: 1211 NLRVSFLPSCSQTKVILCGARLLYQEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNSMLS 1270

Query: 121  LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 180
            LIRSQKYDP+IE                                              LK
Sbjct: 1271 LIRSQKYDPDIE----EDEDKDEALMETRGGNYASTSSSSLESTTKGRLDDSNDYYYDLK 1330

Query: 181  QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
            QCLHVFFQRSLQNRY+TAFDFIVRGH VPQLFS QPERNRASI+LPPTL
Sbjct: 1331 QCLHVFFQRSLQNRYDTAFDFIVRGHDVPQLFSRQPERNRASIELPPTL 1375

[Close]

BLAST of CsGy5G030020 vs. NCBI nr
Match: XP_022925371.1 (TMV resistance protein N-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 168.7 bits (426), Expect = 2.3e-38
Identity = 89/229 (38.86%), Postives = 129/229 (56.33%), Query Frame = 0


Query: 2    DINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRN 61
            D NS  + SFSYQ+E DEY + R SI+ L  G F DDS QLWV +EPR VYPYRLN+WR+
Sbjct: 1323 DENSPNAHSFSYQVENDEYTMQRESILYLTKGLF-DDSHQLWVFFEPRAVYPYRLNQWRH 1382

Query: 62   LRVSFL-PSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 121
            L VSF+  + S  K ++CGARL YK D++  ++T+I++V+G   +LHEFYD V++  M+ 
Sbjct: 1383 LCVSFVCNNNSSLKAVVCGARLAYKHDVEGLINTMINNVMGSPADLHEFYDQVYVESMIR 1442

Query: 122  LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 181
            +I   KYDP                                                +LK
Sbjct: 1443 MIHFHKYDPK------QKEAEGEDDLCLEELIEEHNSNGYPQDSTLTSNAMERNHLLELK 1502

Query: 182  QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
            + +  F Q+ L++R+ T FDF++    +P+ F+ Q E+N+ +IQLPP+L
Sbjct: 1503 ETIPSFLQKDLKDRFGTTFDFVIPRRNIPEWFNQQSEKNQTAIQLPPSL 1544

[Close]

BLAST of CsGy5G030020 vs. NCBI nr
Match: XP_023535306.1 (TMV resistance protein N-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 8.7e-38
Identity = 89/229 (38.86%), Postives = 128/229 (55.90%), Query Frame = 0


Query: 2    DINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRN 61
            D NS  + SFSYQ+E DEY + R SI+ L  G F DDS QLWV +EPR VYPYRLN+WR+
Sbjct: 1276 DKNSPNAHSFSYQVENDEYTMQRESILYLTKGLF-DDSHQLWVFFEPRAVYPYRLNQWRH 1335

Query: 62   LRVSFL-PSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 121
            L VSF+  + S  K ++CGARL YK D++  ++T+I++V+G   +LHEFYD V +  M+ 
Sbjct: 1336 LCVSFVCNNNSSLKAVVCGARLAYKHDVEGLINTMINNVMGSPADLHEFYDQVSVESMIR 1395

Query: 122  LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 181
            +I   KYDP                                                +LK
Sbjct: 1396 MIHFHKYDPK------QKEAEGEDDLCLEELIEEHNSNGYPQDSTLTSNAMERNHLLELK 1455

Query: 182  QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
            + +  F Q+ L++R+ T FDF++    +P+ F+ Q E+N+ +IQLPP+L
Sbjct: 1456 ETIPSFLQKDLKDRFGTTFDFVIPRRNIPEWFNQQSEKNQTAIQLPPSL 1497

[Close]

BLAST of CsGy5G030020 vs. TrEMBL
Match: tr|A0A0A0KST6|A0A0A0KST6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647610 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.3e-98
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 60
           SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR
Sbjct: 70  SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 129

Query: 61  NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 120
           NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS
Sbjct: 130 NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 189

Query: 121 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 180
           LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK
Sbjct: 190 LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 249

Query: 181 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
           QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL
Sbjct: 250 QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 298

[Close]

BLAST of CsGy5G030020 vs. TrEMBL
Match: tr|A0A1S3CAF1|A0A1S3CAF1_CUCME (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103498652 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 3.5e-91
Identity = 174/229 (75.98%), Postives = 180/229 (78.60%), Query Frame = 0


Query: 1    SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWR 60
            SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFS+DSRQLWVS+EPREVYPYRLNKWR
Sbjct: 1151 SDINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSNDSRQLWVSFEPREVYPYRLNKWR 1210

Query: 61   NLRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLS 120
            NLRVSFLPSCSQTKVILCGARLLY+EDLDEFVDTIIDSVLGCSINLHEFYDGVFLN MLS
Sbjct: 1211 NLRVSFLPSCSQTKVILCGARLLYQEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNSMLS 1270

Query: 121  LIRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLK 180
            LIRSQKYDP+IE                                              LK
Sbjct: 1271 LIRSQKYDPDIE----EDEDKDEALMETRGGNYASTSSSSLESTTKGRLDDSNDYYYDLK 1330

Query: 181  QCLHVFFQRSLQNRYNTAFDFIVRGHGVPQLFSHQPERNRASIQLPPTL 230
            QCLHVFFQRSLQNRY+TAFDFIVRGH VPQLFS QPERNRASI+LPPTL
Sbjct: 1331 QCLHVFFQRSLQNRYDTAFDFIVRGHDVPQLFSRQPERNRASIELPPTL 1375

[Close]

BLAST of CsGy5G030020 vs. TrEMBL
Match: tr|A0A1S3CAY0|A0A1S3CAY0_CUCME (uncharacterized protein LOC103498653 OS=Cucumis melo OX=3656 GN=LOC103498653 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.6e-33
Identity = 94/229 (41.05%), Postives = 131/229 (57.21%), Query Frame = 0


Query: 2   DINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRN 61
           D NS  S SFSYQ++ DEY + R  +IRL+   F DD  QLW+ +EPR VYPYRLN+WR+
Sbjct: 357 DENSPKSHSFSYQVDNDEYSMERERVIRLNAELF-DDFHQLWMFFEPRAVYPYRLNQWRH 416

Query: 62  LRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLSL 121
           LR +F+ + S  K +LCGARL+YK+D++ FV+TI+ +VL   + LHEF D +++ GML  
Sbjct: 417 LRFAFVCNDSDFKAVLCGARLVYKQDVEGFVNTIVSNVLSSPVELHEFCDQMYVEGMLRN 476

Query: 122 IRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLKQ 181
           I   KYDP                          XXXXXXXXXXX           +LK+
Sbjct: 477 IHFHKYDPK----HKEEERRQDLCIQQWAEEQNSXXXXXXXXXXXCSSNMEKSLILQLKE 536

Query: 182 CLHVFFQRSLQNRYNTAFDFIV-RGHGVPQLFSHQPERNRASIQLPPTL 230
            +  F Q+  ++R+ + FDF+  + +  P L +     N   +QLPP L
Sbjct: 537 SIPSFLQKDSKDRFGSTFDFVFPKRNFPPALLNQLSPENPTGVQLPPNL 580

[Close]

BLAST of CsGy5G030020 vs. TrEMBL
Match: tr|A0A0A0KSR4|A0A0A0KSR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648120 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32
Identity = 83/229 (36.24%), Postives = 121/229 (52.84%), Query Frame = 0


Query: 2   DINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRN 61
           D NS  S SFSYQ++ DEY + R S+IRL+   F DDS QLW+ +EPR VYPYRLN+WR+
Sbjct: 357 DENSPKSHSFSYQVDNDEYTMERESVIRLNTELF-DDSHQLWMFFEPRGVYPYRLNQWRH 416

Query: 62  LRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLSL 121
           L  +F+ +    K +LCGARL+YK+D++ FV+TI+ +VL   + L EFYD +++ GML  
Sbjct: 417 LCFTFVCNNPDFKAVLCGARLVYKQDVEGFVNTIVSNVLSLPVELLEFYDQMYVEGMLRN 476

Query: 122 IRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLKQ 181
           I   KYDP                                                +LK+
Sbjct: 477 ILYHKYDPK---------------HKQWVEEQNSNPHNSQEDSSSCSSNMERSLILQLKE 536

Query: 182 CLHVFFQRSLQNRYNTAFDFIV-RGHGVPQLFSHQPERNRASIQLPPTL 230
            +  F Q+  ++R+   FDF++ + +  P L +     N   +QLPP+L
Sbjct: 537 SIPSFLQKDSKDRFGNTFDFVIPKRNFPPALLNQLSPENPTGVQLPPSL 569

[Close]

BLAST of CsGy5G030020 vs. TrEMBL
Match: tr|A0A1S3CJJ5|A0A1S3CJJ5_CUCME (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103501686 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 91/227 (40.09%), Postives = 122/227 (53.74%), Query Frame = 0


Query: 2    DINSNISQSFSYQLEFDEYPLGRPSIIRLHDGAFSDDSRQLWVSYEPREVYPYRLNKWRN 61
            D NS  S SFSYQ++ DEY + R S++ L+       S QLWV +EPR VYPYRLN+WR+
Sbjct: 1323 DENSQKSHSFSYQVDNDEYRMERESMLYLNKDLLV-GSHQLWVFFEPRAVYPYRLNQWRH 1382

Query: 62   LRVSFLPSCSQTKVILCGARLLYKEDLDEFVDTIIDSVLGCSINLHEFYDGVFLNGMLSL 121
            LR S + + S  K +LCGA L+YK+DL+ FV+ I+ +VL     LHEFYD  ++  +L  
Sbjct: 1383 LRFSIVCNNSDFKAVLCGANLVYKQDLEGFVNIIVSNVLSSPAELHEFYDRSYVESILRN 1442

Query: 122  IRSQKYDPNIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLKQ 181
            +   KYDP  +                             XXXXXXXX         LKQ
Sbjct: 1443 VHCHKYDP--KKNENDQRRQDHLRIEKWVEEQDSNAHPQEXXXXXXXXNMERSHFSLLKQ 1502

Query: 182  CLHVFFQRSLQNRYNTAFDFIVRGHGV-PQLFSHQPERNRASIQLPP 228
             +  F Q+ L++RY   FDF++    + PQL +    RN   IQLPP
Sbjct: 1503 SIPSFLQKDLKDRYEMTFDFVIPRRNIRPQLINQLSPRNYTRIQLPP 1546

The following BLAST results are available for this feature:

BLAST of CsGy5G030020 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52638.1	2.0e-98	100.00	hypothetical protein Csa_5G647610 [Cucumis sativus]	[more]
XP_011656066.1	2.0e-98	100.00	PREDICTED: uncharacterized protein LOC105435622 [Cucumis sativus]	[more]
XP_008459548.2	5.2e-91	75.98	PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]	[more]
XP_022925371.1	2.3e-38	38.86	TMV resistance protein N-like isoform X1 [Cucurbita moschata]	[more]
XP_023535306.1	8.7e-38	38.86	TMV resistance protein N-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G030020 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy5G030020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G030020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KST6\|A0A0A0KST6_CUCSA	1.3e-98	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647610 PE=4 SV=1	[more]
tr\|A0A1S3CAF1\|A0A1S3CAF1_CUCME	3.5e-91	75.98	LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S3CAY0\|A0A1S3CAY0_CUCME	9.6e-33	41.05	uncharacterized protein LOC103498653 OS=Cucumis melo OX=3656 GN=LOC103498653 PE=...	[more]
tr\|A0A0A0KSR4\|A0A0A0KSR4_CUCSA	1.6e-32	36.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648120 PE=4 SV=1	[more]
tr\|A0A1S3CJJ5\|A0A1S3CJJ5_CUCME	1.4e-31	40.09	TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103501686 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043531	ADP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G030020.1	CsGy5G030020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G030020	Csa5G647610	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G030020	MELO3C022150	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G030020	ClCG08G001360	Watermelon (Charleston Gray)	cgybwcgB379
CsGy5G030020	CSPI05G30670	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G030020	MELO3C022152.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G030020	Bhi06G000161	Wax gourd	cgybwgoB439

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G030020	Watermelon (97103) v2	cgybwmbB385
CsGy5G030020	Cucurbita maxima (Rimu)	cgybcmaB578
CsGy5G030020	Cucurbita maxima (Rimu)	cgybcmaB633
CsGy5G030020	Cucurbita moschata (Rifu)	cgybcmoB551
CsGy5G030020	Cucurbita moschata (Rifu)	cgybcmoB611
CsGy5G030020	Cucurbita pepo (Zucchini)	cgybcpeB672
CsGy5G030020	Cucurbita pepo (Zucchini)	cgybcpeB696
CsGy5G030020	Bottle gourd (USVL1VR-Ls)	cgyblsiB357
CsGy5G030020	Bottle gourd (USVL1VR-Ls)	cgyblsiB358
CsGy5G030020	Watermelon (Charleston Gray)	cgybwcgB381
CsGy5G030020	Watermelon (97103) v1	cgybwmB351
CsGy5G030020	Silver-seed gourd	carcgybB0178
CsGy5G030020	Silver-seed gourd	carcgybB0674
CsGy5G030020	Cucumber (Chinese Long) v3	cgybcucB232