CsGy4G019670 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G019670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 26353335 .. 26354187 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATGTTGTCCAAAAAGAAAAGTGTCTCTCAAGATGCTACTTTCTCTATTCCATCCAAAGATAAAGACTATGAAGAGATAACTTATTACGATTTTGATGATTCAACTACTGGTACTTTCAAGGATGATTCTGAAAATATTAACAAAGAAAATGTGAATGACCAAGATGAGAATGTCTACAGTGAGTTAGAAAAATATTGGGGCTTTGTTGAAGAACCTAATGAGGAAGGTCACGTGTCCAAGGTTCTGCCACTCGAGCCTCTGCTAAAAATTCCAAGAATAAGCCTTCCACTGTGTCGGTTCCATCCATTCCATTGGATGAAGTTTCCTTCCATTATGAAAAAGTACAATAACCCTTTGGAAGTATGTTTAGTGAAAAATCTTTCCAGAAAAGGAGTTGTCTGAGAAACCTCATGTCTGCTTGGAGGTCATGGAGCTGCATGTGAAAAATCGATATGATGAGGTCTGTGACTAACTTTGGTTCCTGTTGCCCTAAATTTGTAAGGGAGTTTGTTGTTTAATTTATCTCCATTTTTTTATGATGCCAACTCTTCTAATTATCGAAAAGTCCATGTTCGTGGTCACAATAGCTTTGTTTTCACAATGTCATCATCAACAAGTTTCTGGATATAAATGTGCCTCAGGGAATGCATAGACTAATAACCTCTTGAAGGACCTTGTGTCTGAATTGGCAGATGGTCTGCGAGAAAATTTGCTTAAATCTGGGTTACTTGCAACCATTGATCTAAGTGCCAAATATGATATCTTGTTTCACATTAGTTGTGGCAAACTGATGCCCTTCATCTCACCATACAAGGGTGTCACTTTATATGGCTACTTTGATTCTTAA

mRNA sequence

ATGGACATGTTGTCCAAAAAGAAAAGTGTCTCTCAAGATGCTACTTTCTCTATTCCATCCAAAGATAAAGACTATGAAGAGATAACTTATTACGATTTTGATGATTCAACTACTGGTACTTTCAAGGATGATTCTGAAAATATTAACAAAGAAAATGTGAATGACCAAGATGAGAATGTCTACAGTGAGTTAGAAAAATATTGGGGCTTTGTTGAAGAACCTAATGAGGAAGGTCACGTGTCCAAGGTTCTGCCACTCGAGCCTCTGCTAAAAATTCCAAGAATAAGCCTTCCACTGTGTCGGTTCCATCCATTCCATTGGATGAAGTTTCCTTCCATTATGAAAAAGTACAATAACCCTTTGGAAGAGTTGTCTGAGAAACCTCATGTCTGCTTGGAGGTCATGGAGCTGCATGTGAAAAATCGATATGATGAGGACCTTGTGTCTGAATTGGCAGATGGTCTGCGAGAAAATTTGCTTAAATCTGGGTTACTTGCAACCATTGATCTAAGTGCCAAATATGATATCTTGTTTCACATTAGTTGTGGCAAACTGATGCCCTTCATCTCACCATACAAGGGTGTCACTTTATATGGCTACTTTGATTCTTAA

Coding sequence (CDS)

ATGGACATGTTGTCCAAAAAGAAAAGTGTCTCTCAAGATGCTACTTTCTCTATTCCATCCAAAGATAAAGACTATGAAGAGATAACTTATTACGATTTTGATGATTCAACTACTGGTACTTTCAAGGATGATTCTGAAAATATTAACAAAGAAAATGTGAATGACCAAGATGAGAATGTCTACAGTGAGTTAGAAAAATATTGGGGCTTTGTTGAAGAACCTAATGAGGAAGGTCACGTGTCCAAGGTTCTGCCACTCGAGCCTCTGCTAAAAATTCCAAGAATAAGCCTTCCACTGTGTCGGTTCCATCCATTCCATTGGATGAAGTTTCCTTCCATTATGAAAAAGTACAATAACCCTTTGGAAGAGTTGTCTGAGAAACCTCATGTCTGCTTGGAGGTCATGGAGCTGCATGTGAAAAATCGATATGATGAGGACCTTGTGTCTGAATTGGCAGATGGTCTGCGAGAAAATTTGCTTAAATCTGGGTTACTTGCAACCATTGATCTAAGTGCCAAATATGATATCTTGTTTCACATTAGTTGTGGCAAACTGATGCCCTTCATCTCACCATACAAGGGTGTCACTTTATATGGCTACTTTGATTCTTAA

Protein sequence

MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENVYSELEKYWGFVEEPNEEGHVSKVLPLEPLLKIPRISLPLCRFHPFHWMKFPSIMKKYNNPLEELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHISCGKLMPFISPYKGVTLYGYFDS
Homology
[Close]
BLAST of CsGy4G019670 vs. NCBI nr
Match: KGN54877.1 (hypothetical protein Csa_4G571730 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 2.7e-75
Identity = 157/203 (77.34%), Postives = 158/203 (77.83%), Query Frame = 0 

Query: 1   MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV 60
           MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV
Sbjct: 1   MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV 60

Query: 61  YSELEKYWGFVEEPNEEGHVSKVLPLEPLLKIPRISLPLCRFHPFHWMKFPSIMKKYNNP 120
           YSELEKYWGFVEEPNEE                                           
Sbjct: 61  YSELEKYWGFVEEPNEEE------------------------------------------ 120

Query: 121 LEELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI 180
            +ELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI
Sbjct: 121 -KELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI 160

Query: 181 SCGKLMPFISPYKGVTLYGYFDS 204
           SCGKLM FISPYKGVTLYGYFDS
Sbjct: 181 SCGKLMAFISPYKGVTLYGYFDS 160

[Close]
BLAST of CsGy4G019670 vs. TrEMBL
Match: tr|A0A0A0L2P5|A0A0A0L2P5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G571730 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.8e-75
Identity = 157/203 (77.34%), Postives = 158/203 (77.83%), Query Frame = 0 

Query: 1   MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV 60
           MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV
Sbjct: 1   MDMLSKKKSVSQDATFSIPSKDKDYEEITYYDFDDSTTGTFKDDSENINKENVNDQDENV 60

Query: 61  YSELEKYWGFVEEPNEEGHVSKVLPLEPLLKIPRISLPLCRFHPFHWMKFPSIMKKYNNP 120
           YSELEKYWGFVEEPNEE                                           
Sbjct: 61  YSELEKYWGFVEEPNEEE------------------------------------------ 120

Query: 121 LEELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI 180
            +ELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI
Sbjct: 121 -KELSEKPHVCLEVMELHVKNRYDEDLVSELADGLRENLLKSGLLATIDLSAKYDILFHI 160

Query: 181 SCGKLMPFISPYKGVTLYGYFDS 204
           SCGKLM FISPYKGVTLYGYFDS
Sbjct: 181 SCGKLMAFISPYKGVTLYGYFDS 160

The following BLAST results are available for this feature:
BLAST of CsGy4G019670 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54877.12.7e-7577.34hypothetical protein Csa_4G571730 [Cucumis sativus][more]
BLAST of CsGy4G019670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G019670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G019670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L2P5|A0A0A0L2P5_CUCSA1.8e-7577.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G571730 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G019670.1CsGy4G019670.1mRNA