CsGy4G016700 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGGTTGGCATGACCATCTTTTCCTGTCTTTCAATGGGGTATGCATAATTATAACTTGTTTTCAATCTGAAAAACTTCGGTATCCTATCGCCTGAGCGCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCAGCTGAATATGTCAAGAAACTTGAAGTAATGATAAATTAGTCACATGAGTGTGCTTGTTGAAAAGGAAGTTGGGAGGTGCGGCTTATCTCAAAAGATGACGTATTTCCATAAAATCTCACAAACAGGCAATGCAACGGGATGGACCGAGATTCAAGACACGTCTCTCCCGCTTCACTTTCAGAGAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCGTACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGGTTGGCATGACCATCTTTTCCTGTCTTTCAATGGGGCAATGCAACGGGATGGACCGAGATTCAAGACACGTCTCTCCCGCTTCACTTTCAGAGAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCGTACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGGTTGGCATGACCATCTTTTCCTGTCTTTCAATGGGGCAATGCAACGGGATGGACCGAGATTCAAGACACGTCTCTCCCGCTTCACTTTCAGAGAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCGTACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQVGMTIFSCLSMGQCNGMDRDSRHVSPASLSESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVARSLSEAYKLIYDTIMDPNNRYPDPTACKASSKPDKNDFGNITIEI
BLAST of CsGy4G016700 vs. NCBI nr
Match: KGN54536.1 (hypothetical protein Csa_4G358740 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 2.6e-44 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of CsGy4G016700 vs. NCBI nr
Match: XP_022941125.1 (conserved oligomeric Golgi complex subunit 6 [Cucurbita moschata]) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 103/208 (49.52%), Postives = 122/208 (58.65%), Query Frame = 0
BLAST of CsGy4G016700 vs. NCBI nr
Match: XP_023525183.1 (conserved oligomeric Golgi complex subunit 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 103/208 (49.52%), Postives = 122/208 (58.65%), Query Frame = 0
BLAST of CsGy4G016700 vs. NCBI nr
Match: XP_022980951.1 (conserved oligomeric Golgi complex subunit 6 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35 Identity = 104/208 (50.00%), Postives = 121/208 (58.17%), Query Frame = 0
BLAST of CsGy4G016700 vs. NCBI nr
Match: XP_004142643.1 (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis sativus] >KGN54532.1 hypothetical protein Csa_4G358700 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 3.7e-35 Identity = 106/203 (52.22%), Postives = 118/203 (58.13%), Query Frame = 0
BLAST of CsGy4G016700 vs. TAIR10
Match: AT1G31780.1 (Conserved oligomeric complex COG6 (InterPro:IPR010490)) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24 Identity = 82/206 (39.81%), Postives = 105/206 (50.97%), Query Frame = 0
BLAST of CsGy4G016700 vs. TrEMBL
Match: tr|A0A0A0L353|A0A0A0L353_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358740 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.7e-44 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of CsGy4G016700 vs. TrEMBL
Match: tr|A0A0A0L1U3|A0A0A0L1U3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358700 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.5e-35 Identity = 106/203 (52.22%), Postives = 118/203 (58.13%), Query Frame = 0
BLAST of CsGy4G016700 vs. TrEMBL
Match: tr|A0A1S3BAN8|A0A1S3BAN8_CUCME (conserved oligomeric Golgi complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103487619 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35 Identity = 106/203 (52.22%), Postives = 117/203 (57.64%), Query Frame = 0
BLAST of CsGy4G016700 vs. TrEMBL
Match: tr|A0A2I4E5B9|A0A2I4E5B9_9ROSI (conserved oligomeric Golgi complex subunit 6 OS=Juglans regia OX=51240 GN=LOC108986428 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29 Identity = 94/214 (43.93%), Postives = 115/214 (53.74%), Query Frame = 0
BLAST of CsGy4G016700 vs. TrEMBL
Match: tr|A0A2N9HPK3|A0A2N9HPK3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41787 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.0e-28 Identity = 93/216 (43.06%), Postives = 114/216 (52.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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