CsGy3G025220 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGGCATGCTTCTCCTAAAGCAAGCAAGTATGAGTCTTTTAAAACAATGTTGTGCGTTGAGTTTAAAATGATATTTTGTGAATTGTAAAGAACATATAGGCTCTATTATACAGTTGTTATAATCCTCAATTCTTAGTATTGAGAAGTTCTTCGTATCTTATATTTCATGGGGAAGGCTTCTGACAATTATAATTTCTGAGAGAAGCGCAAAATAAAATGACCGAATGTACATATACTGTAATCATCTCAAAATTTATTGACTGGCAAAGTTCTTTAGGCACACTCGTACATGCATCCACACCCCAGGATCTCCTCCCATGGTGCCAGATGACCTTTCGCGATCAAGCTTGTTGTCTGCTTTAGATGGGGCTAAAATTGTATATTCTGACATAAGATTGCACGAAACTGCTTTGCTTGTTGCACAAGAGGTAAAGATATCATTAATTTCTTTGATGCTTCAAGTTTTCACTCCTTGTGTTGTGCTTACTCCTTTAAGTAGATTTTTTAGGAAACAGAGTTCTCTGTTCACCTTCCAGGTTGAAAGTTTGAAAGAAAATCAATATTTTTCTTCTTTCAGCTTTTGGGTTGTTATTTCTTTGTCACTTTTCAAACATCAATGAACTGGTTGTTGATCCATGTTGTAAGGGACATTGATATTACCTTTTCTGTACAGGCAGCTCGGCAGAATATACCTATGTTGATTGATGCAGAAAGGAAAAGGGAAGGTCTGGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGTTCAACAAGTTTTCCACAGGCAAGTGCACTTTCTTCGTGCTCTTAA ATGTTAGGCATGCTTCTCCTAAAGCAAGCAAGATCTCCTCCCATGGTGCCAGATGACCTTTCGCGATCAAGCTTGTTGTCTGCTTTAGATGGGGCTAAAATTGTATATTCTGACATAAGATTGCACGAAACTGCTTTGCTTGTTGCACAAGAGGTAAAGATATCATTAATTTCTTTGATGCTTCAAGTTTTCACTCCTTGTGTTGTGCTTACTCCTTTAAGTAGATTTTTTAGGAAACAGAGTTCTCTGTTCACCTTCCAGGTTGAAACTCGGCAGAATATACCTATGTTGATTGATGCAGAAAGGAAAAGGGAAGGTCTGGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGTTCAACAAGTTTTCCACAGGCAAGTGCACTTTCTTCGTGCTCTTAA ATGTTAGGCATGCTTCTCCTAAAGCAAGCAAGATCTCCTCCCATGGTGCCAGATGACCTTTCGCGATCAAGCTTGTTGTCTGCTTTAGATGGGGCTAAAATTGTATATTCTGACATAAGATTGCACGAAACTGCTTTGCTTGTTGCACAAGAGGTAAAGATATCATTAATTTCTTTGATGCTTCAAGTTTTCACTCCTTGTGTTGTGCTTACTCCTTTAAGTAGATTTTTTAGGAAACAGAGTTCTCTGTTCACCTTCCAGGTTGAAACTCGGCAGAATATACCTATGTTGATTGATGCAGAAAGGAAAAGGGAAGGTCTGGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGTTCAACAAGTTTTCCACAGGCAAGTGCACTTTCTTCGTGCTCTTAA MLGMLLLKQARSPPMVPDDLSRSSLLSALDGAKIVYSDIRLHETALLVAQEVKISLISLMLQVFTPCVVLTPLSRFFRKQSSLFTFQVETRQNIPMLIDAERKREGLDDLLAFASYVVCSTSFPQASALSSCS
BLAST of CsGy3G025220 vs. NCBI nr
Match: XP_004152009.1 (PREDICTED: ribokinase [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 2.0e-26 Identity = 75/114 (65.79%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of CsGy3G025220 vs. NCBI nr
Match: XP_008447353.1 (PREDICTED: ribokinase isoform X1 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 6.4e-25 Identity = 71/114 (62.28%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of CsGy3G025220 vs. NCBI nr
Match: XP_008447354.1 (PREDICTED: ribokinase isoform X2 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 6.4e-25 Identity = 71/114 (62.28%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of CsGy3G025220 vs. NCBI nr
Match: XP_022967275.1 (ribokinase-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 119.8 bits (299), Expect = 7.1e-24 Identity = 69/114 (60.53%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of CsGy3G025220 vs. NCBI nr
Match: XP_022967276.1 (ribokinase-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 119.8 bits (299), Expect = 7.1e-24 Identity = 69/114 (60.53%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of CsGy3G025220 vs. TAIR10
Match: AT4G28706.4 (pfkB-like carbohydrate kinase family protein) HSP 1 Score: 91.7 bits (226), Expect = 3.8e-19 Identity = 51/113 (45.13%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of CsGy3G025220 vs. TAIR10
Match: AT5G43910.2 (pfkB-like carbohydrate kinase family protein) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12 Identity = 40/113 (35.40%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of CsGy3G025220 vs. TrEMBL
Match: tr|A0A1S3BH87|A0A1S3BH87_CUCME (ribokinase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489824 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25 Identity = 71/114 (62.28%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of CsGy3G025220 vs. TrEMBL
Match: tr|A0A1S3BH76|A0A1S3BH76_CUCME (ribokinase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489824 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25 Identity = 71/114 (62.28%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of CsGy3G025220 vs. TrEMBL
Match: tr|B9T5V5|B9T5V5_RICCO (Kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_0995940 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.5e-19 Identity = 62/114 (54.39%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of CsGy3G025220 vs. TrEMBL
Match: tr|A0A2R6P7F4|A0A2R6P7F4_ACTCH (Ribokinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc32018 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18 Identity = 59/115 (51.30%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of CsGy3G025220 vs. TrEMBL
Match: tr|A0A067JRD0|A0A067JRD0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17600 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18 Identity = 58/114 (50.88%), Postives = 67/114 (58.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |