CsGy2G015880 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G015880
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	60S ribosomal protein L10
Location	Chr2 : 15830619 .. 15832215 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTTCGTTTTCCCAAAAATAAACCCTAATCTAGCACTCGAAGTTCTCCAGCAAAACACAGCCATGGGGAGAAGTATTGCTCTCTATTCTGTCTACAAATTGCAATTGAAATGTAGCATTTTTTTTTCTTTCTTTTATCTTTTCTCATTGTTTTTGCATTTGGTTTTGCAGGACCTGCTAGATGTTACCGCCAAATCAAGAACAAGCCTTATCCCAAATCGCGATTTTGTCGCGGTGTTCCTGATCCCAAGATTAGGATTTATGATGTTGGAATGAAGAAGAAGGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAGAATGTTTCAAGTGAAGCTTTGGAAGCAGCTCGTATTGCCTGTAACAAGTACATGGCAAAATTTGCTGGGAAAGATGCGTTTCATTTGAGGGTTAGAGTTCATCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCCGGAGCTGATAGGCTCCAAACTGGGATGAGAGGTGCTTTTGGTAAGCCACAAGGAACTTGTGCAAGAGTCGCCATTGGTCAGGTTCTTCTTTCCGTTCGATGCAAGGACAGCAACAGCCAGCATGCTCAGGAGGCTCTCCGTCGTGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGTATGCCTCTTCATTCTCATTTCATCTGATTTATATTTAGTTTCAATTCATCTCCTTGGAGTGTATATTTGATTGAATCATAAATGTTCAAACTTTTCTCTTCAGGGGATTCACTAAATTTAGCCGAGCTGATTACCTCAAGTTCAAGTCAGAGAACAAGATTATGCCAGATGGTGTTAATGCTAAGGTATTTGATGCCTGATAATTGCAATTGCATTCCTGTTCTATTCTATTATAGGAGAATTACTTCTTTCATCAATTTGTTGCATTTAGCTGAAGATTGATTTACAAACTAAAGAAACGTGGAGGGGTTACTCCCTGAAAATGTTTTGAATGGGGCTTCCTTGTTAGACCTTAGGGCCATATTTTTAATTGTGATCTCTTGTTTTTCTGGGTTGTCCGTCACTTTTAAGGCACAATCACTGCTGCTATCAATATGTTTATATATTTTCTATAGTTTGTTGTGAGTTGCATTCTTGTTAATTTATTTTGAGTTAAACTCATGGTTTGAAAATTTCGACTGTGCAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGTCTAAGCTAAGCTAGTTAATTTTTGGATTTTGAAACTATGTGAGAATTAATGTCGACATCATCATCATTTTCTCTGTTTGGACATTGTGAAATGAGCTAGTCTCTTTTTTGTTTTGATTTACTACATTTTGATATTGGAACGAAAGCTTTGTTTCTTTCTTTTGAGTTCTATTTAATACTTAGTCGCTGTAGAGTTTGATTTTTTTCAAAACCTTGAATAATGATATGAATGTGAGAATCCCCCAACTTCTACAATGGCATCTTCAAGCAAATCTCCATAGTTTAAAGGATAGGTTTCTCTTTTTCTAAAAATTAGCAAATGGTTTTTAAAA

mRNA sequence

ACCTTCGTTTTCCCAAAAATAAACCCTAATCTAGCACTCGAAGTTCTCCAGCAAAACACAGCCATGGGGAGAAGACCTGCTAGATGTTACCGCCAAATCAAGAACAAGCCTTATCCCAAATCGCGATTTTGTCGCGGTGTTCCTGATCCCAAGATTAGGATTTATGATGTTGGAATGAAGAAGAAGGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAGAATGTTTCAAGTGAAGCTTTGGAAGCAGCTCGTATTGCCTGTAACAAGTACATGGCAAAATTTGCTGGGAAAGATGCGTTTCATTTGAGGGTTAGAGTTCATCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCCGGAGCTGATAGGCTCCAAACTGGGATGAGAGGTGCTTTTGGTAAGCCACAAGGAACTTGTGCAAGAGTCGCCATTGGTCAGGTTCTTCTTTCCGTTCGATGCAAGGACAGCAACAGCCAGCATGCTCAGGAGGCTCTCCGTCGTGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTTAGCCGAGCTGATTACCTCAAGTTCAAGTCAGAGAACAAGATTATGCCAGATGGTGTTAATGCTAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGTCTAAGCTAAGCTAGTTAATTTTTGGATTTTGAAACTATGTGAGAATTAATGTCGACATCATCATCATTTTCTCTGTTTGGACATTGTGAAATGAGCTAGTCTCTTTTTTGTTTTGATTTACTACATTTTGATATTGGAACGAAAGCTTTGTTTCTTTCTTTTGAGTTCTATTTAATACTTAGTCGCTGTAGAGTTTGATTTTTTTCAAAACCTTGAATAATGATATGAATGTGAGAATCCCCCAACTTCTACAATGGCATCTTCAAGCAAATCTCCATAGTTTAAAGGATAGGTTTCTCTTTTTCTAAAAATTAGCAAATGGTTTTTAAAA

Coding sequence (CDS)

ATGGGGAGAAGACCTGCTAGATGTTACCGCCAAATCAAGAACAAGCCTTATCCCAAATCGCGATTTTGTCGCGGTGTTCCTGATCCCAAGATTAGGATTTATGATGTTGGAATGAAGAAGAAGGGTGTTGATGAATTCCCCTTCTGTGTTCATCTTGTGAGTTGGGAGAAAGAGAATGTTTCAAGTGAAGCTTTGGAAGCAGCTCGTATTGCCTGTAACAAGTACATGGCAAAATTTGCTGGGAAAGATGCGTTTCATTTGAGGGTTAGAGTTCATCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCCGGAGCTGATAGGCTCCAAACTGGGATGAGAGGTGCTTTTGGTAAGCCACAAGGAACTTGTGCAAGAGTCGCCATTGGTCAGGTTCTTCTTTCCGTTCGATGCAAGGACAGCAACAGCCAGCATGCTCAGGAGGCTCTCCGTCGTGCTAAGTTTAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTTAGCCGAGCTGATTACCTCAAGTTCAAGTCAGAGAACAAGATTATGCCAGATGGTGTTAATGCTAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGTCTAA

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV

Homology

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BLAST of CsGy2G015880 vs. NCBI nr
Match: XP_004147346.1 (PREDICTED: 60S ribosomal protein L10 [Cucumis sativus] >KGN62212.1 hypothetical protein Csa_2G336100 [Cucumis sativus])

HSP 1 Score: 458.8 bits (1179), Expect = 1.1e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV 221
           YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV 220

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BLAST of CsGy2G015880 vs. NCBI nr
Match: XP_008460864.1 (PREDICTED: 60S ribosomal protein L10 [Cucumis melo])

HSP 1 Score: 454.9 bits (1169), Expect = 1.5e-124
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL QT
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT 219

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BLAST of CsGy2G015880 vs. NCBI nr
Match: XP_022148973.1 (60S ribosomal protein L10-like [Momordica charantia])

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YL +KSENKIMPDGVNAKLLGCHGPLANRQPGRAFL QT
Sbjct: 181 YLSYKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT 219

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BLAST of CsGy2G015880 vs. NCBI nr
Match: XP_022932025.1 (60S ribosomal protein L10 [Cucurbita moschata] >XP_022973818.1 60S ribosomal protein L10 [Cucurbita maxima] >XP_023512390.1 60S ribosomal protein L10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.7e-123
Identity = 215/218 (98.62%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQ 219
           YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLS+
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSE 218

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BLAST of CsGy2G015880 vs. NCBI nr
Match: XP_022142890.1 (60S ribosomal protein L10-like [Momordica charantia] >XP_022142891.1 60S ribosomal protein L10-like [Momordica charantia])

HSP 1 Score: 449.5 bits (1155), Expect = 6.5e-123
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFL QT
Sbjct: 181 YLNYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQT 219

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BLAST of CsGy2G015880 vs. TAIR10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein)

HSP 1 Score: 410.2 bits (1053), Expect = 7.9e-115
Identity = 193/217 (88.94%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLS 218
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLS 217

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BLAST of CsGy2G015880 vs. TAIR10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein)

HSP 1 Score: 407.9 bits (1047), Expect = 3.9e-114
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 217
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 216

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BLAST of CsGy2G015880 vs. TAIR10
Match: AT1G66580.1 (senescence associated gene 24)

HSP 1 Score: 403.3 bits (1035), Expect = 9.7e-113
Identity = 191/219 (87.21%), Postives = 203/219 (92.69%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           Y K ++  +I+PDGVNAK L  HGPLANRQPG AF+S T
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISAT 219

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BLAST of CsGy2G015880 vs. Swiss-Prot
Match: sp|Q9SPB3|RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.7e-119
Identity = 200/217 (92.17%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLS 218
           Y+K+KS+N+I+PDGVNAKLLGCHGPLANRQPG+AF++
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFIN 217

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BLAST of CsGy2G015880 vs. Swiss-Prot
Match: sp|P93847|RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.0e-119
Identity = 205/219 (93.61%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YLK+KSEN+I+PDGVNAKLLG HGPLA RQPGRAFLS +
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219

[Close]

BLAST of CsGy2G015880 vs. Swiss-Prot
Match: sp|Q9M5M7|RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 9.6e-118
Identity = 201/216 (93.06%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y + KSEN+I+PDGVNAKLLGCHG LANR+PGRAF+
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFI 216

[Close]

BLAST of CsGy2G015880 vs. Swiss-Prot
Match: sp|Q08770|RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-113
Identity = 193/217 (88.94%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLS 218
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLS 217

[Close]

BLAST of CsGy2G015880 vs. Swiss-Prot
Match: sp|Q93VT9|RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 7.1e-113
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 217
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of CsGy2G015880 vs. TrEMBL
Match: tr|A0A0A0LN38|A0A0A0LN38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336100 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 7.1e-126
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV 221
           YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV 220

[Close]

BLAST of CsGy2G015880 vs. TrEMBL
Match: tr|A0A1S3CDF3|A0A1S3CDF3_CUCME (60S ribosomal protein L10 OS=Cucumis melo OX=3656 GN=LOC103499612 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.0e-124
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL QT
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQT 219

[Close]

BLAST of CsGy2G015880 vs. TrEMBL
Match: tr|A0A1S3CAD5|A0A1S3CAD5_CUCME (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 5.6e-123
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 26  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 85

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 86  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 145

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 146 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 205

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQT 220
           YL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFL QT
Sbjct: 206 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQT 244

[Close]

BLAST of CsGy2G015880 vs. TrEMBL
Match: tr|A0A1S3VBK1|A0A1S3VBK1_VIGRR (60S ribosomal protein L10 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773549 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 2.8e-122
Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLS 218
           YLKFKSEN+IMPDGVNAKLLGCHGPLANRQPGRAFLS
Sbjct: 181 YLKFKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLS 217

[Close]

BLAST of CsGy2G015880 vs. TrEMBL
Match: tr|A0A1S2YZ76|A0A1S2YZ76_CICAR (60S ribosomal protein L10-like OS=Cicer arietinum OX=3827 GN=LOC101494971 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 8.1e-122
Identity = 211/220 (95.91%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKD FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDTFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQTV 221
           YLK+KSEN+IMPDGVNAKLLGCHGPLANRQPGRAFL+ +V
Sbjct: 181 YLKYKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLNASV 220

The following BLAST results are available for this feature:

BLAST of CsGy2G015880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147346.1	1.1e-125	100.00	PREDICTED: 60S ribosomal protein L10 [Cucumis sativus] >KGN62212.1 hypothetical ...	[more]
XP_008460864.1	1.5e-124	99.54	PREDICTED: 60S ribosomal protein L10 [Cucumis melo]	[more]
XP_022148973.1	1.3e-123	98.63	60S ribosomal protein L10-like [Momordica charantia]	[more]
XP_022932025.1	1.7e-123	98.62	60S ribosomal protein L10 [Cucurbita moschata] >XP_022973818.1 60S ribosomal pro...	[more]
XP_022142890.1	6.5e-123	97.72	60S ribosomal protein L10-like [Momordica charantia] >XP_022142891.1 60S ribosom...	[more]

BLAST of CsGy2G015880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26910.1	7.9e-115	88.94	Ribosomal protein L16p/L10e family protein	[more]
AT1G14320.1	3.9e-114	88.43	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	9.7e-113	87.21	senescence associated gene 24	[more]

BLAST of CsGy2G015880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SPB3\|RL10_VITRI	1.7e-119	92.17	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
sp\|P93847\|RL10_SOLME	3.0e-119	93.61	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
sp\|Q9M5M7\|RL10_EUPES	9.6e-118	93.06	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
sp\|Q08770\|RL102_ARATH	1.4e-113	88.94	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]
sp\|Q93VT9\|RL101_ARATH	7.1e-113	88.43	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]

BLAST of CsGy2G015880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LN38\|A0A0A0LN38_CUCSA	7.1e-126	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336100 PE=4 SV=1	[more]
tr\|A0A1S3CDF3\|A0A1S3CDF3_CUCME	1.0e-124	99.54	60S ribosomal protein L10 OS=Cucumis melo OX=3656 GN=LOC103499612 PE=4 SV=1	[more]
tr\|A0A1S3CAD5\|A0A1S3CAD5_CUCME	5.6e-123	97.72	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=4 SV=1	[more]
tr\|A0A1S3VBK1\|A0A1S3VBK1_VIGRR	2.8e-122	98.16	60S ribosomal protein L10 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773549 ...	[more]
tr\|A0A1S2YZ76\|A0A1S2YZ76_CICAR	8.1e-122	95.91	60S ribosomal protein L10-like OS=Cicer arietinum OX=3827 GN=LOC101494971 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR018255	Ribosomal_L10e_CS
IPR036920	Ribosomal_L10e/L16_sf
IPR016180	Ribosomal_L10e/L16
IPR001197	Ribosomal_L10e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G015880.1	CsGy2G015880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001197	Ribosomal protein L10e	PIRSF	PIRSF005590	RPL10a_RPL10e	coord: 1..182 e-value: 2.8E-95 score: 314.9
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 1..174 e-value: 3.4E-77 score: 255.9
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..217
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 12..166 e-value: 5.9E-42 score: 142.7
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 41..166 e-value: 2.92567E-43 score: 142.245
None	No IPR available	GENE3D	G3DSA:2.20.25.330		coord: 175..214 e-value: 3.4E-20 score: 73.2
None	No IPR available	PANTHER	PTHR11726:SF22	SUBFAMILY NOT NAMED	coord: 1..217
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	G3DSA:3.90.1170.10		coord: 1..174 e-value: 3.1E-96 score: 322.1
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	SSF54686	Ribosomal protein L16p/L10e	coord: 4..173
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 108..129

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G015880	Cla007827	Watermelon (97103) v1	cgybwmB134
CsGy2G015880	Csa2G336100	Cucumber (Chinese Long) v2	cgybcuB058
CsGy2G015880	MELO3C023223	Melon (DHL92) v3.5.1	cgybmeB086
CsGy2G015880	ClCG02G000330	Watermelon (Charleston Gray)	cgybwcgB121
CsGy2G015880	CSPI02G16180	Wild cucumber (PI 183967)	cgybcpiB058
CsGy2G015880	CmaCh20G010520	Cucurbita maxima (Rimu)	cgybcmaB219
CsGy2G015880	CmaCh02G006420	Cucurbita maxima (Rimu)	cgybcmaB223
CsGy2G015880	CmoCh02G006460	Cucurbita moschata (Rifu)	cgybcmoB215
CsGy2G015880	CmoCh20G010580	Cucurbita moschata (Rifu)	cgybcmoB210
CsGy2G015880	Lsi10G007540	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G015880	Cp4.1LG05g10410	Cucurbita pepo (Zucchini)	cgybcpeB247
CsGy2G015880	Cp4.1LG16g00910	Cucurbita pepo (Zucchini)	cgybcpeB199
CsGy2G015880	MELO3C023223.2	Melon (DHL92) v3.6.1	cgybmedB081
CsGy2G015880	CsaV3_2G019510	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G015880	Cla97C02G026600	Watermelon (97103) v2	cgybwmbB115
CsGy2G015880	Bhi10G001354	Wax gourd	cgybwgoB170
CsGy2G015880	Carg24306	Silver-seed gourd	carcgybB0715

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G015880	Cucurbita moschata (Rifu)	cgybcmoB214
CsGy2G015880	Cucurbita pepo (Zucchini)	cgybcpeB194
CsGy2G015880	Silver-seed gourd	carcgybB1038