CsGy2G013240 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G013240
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	auxin transporter-like protein 2
Location	Chr2 : 13010050 .. 13011327 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGGCGGAGGCAGCTGCCGAGACGACGACGACAATGACAACGACAACAGTGATAGTTGGGAAGAATAGTAATCATAACAATAATGAGCCAACCAACGCGAAAACGAAGCTCTCGAAGCTGTTTTGGCATGGGGTTCAGGTTATGATGCTTGGTTCAGTTGTGCTTCAAACCAGGTAAATTATTATAAGGACCCTAATCAATTGAATGCTGATTATAGTAATATGGGTTTTGAATTTGGGTTTTTAATGATGATGAACAGGTTGCTCAAGTTCTTCTTACATTGCCATATTCATTTTCTCAAATGGGAATGGTTTCTGGAATTGTTCTTCAGCTGTTGTATGGATTGATGGGAAGTTGGACAGCTTATCTTATTACTTCACTTTATCTTGAATATAAACTAAGGAAACAGACTCAAAAACCTCAATACTTTACAAATCATGTCATTCAGGTCTCAACACTCTTCTCTTTAGACAGATTCTCCAGAAGTCATTTTCCTTCCCAATTAATAATAATAATATTACAACTTAAGCTTTAGGTTAAACGTTAAACAATACAATTTTGTTGTTATGATGATAATACAGTGGTTTGAGGTTCTAGAGGGGCTACTAGGGAGGCGATGGAGGAACGTGGGACTAGTGTTCAATTGCACGTTTTTGTTATTCGGGTCAGTGATCCAACTAATAGCATGTGCAAGGTAAGATGATGAATAGTATGGAAATTAGTTAAATCTTAACATATTGATATCATTATCAATTAATATTGTGGAGTAAAACAATATTTATATATATTTTGGTGTGTAGCAACATATATTACATAAATGAGAAGATTGAGAAGAGGACATGGACATACATCTTTGGAGCATGCTGTGCAACAACTGTGTTTGTTCCTTCTTTTCATAATTACAGAATTTGGTCTTTTTTGGGTCTTGCAATGACCACTTACACTGCTTGGTATCTTGCCATTGCCTCCTTCCTTCATGGCCAGGTAAATGCTATCAATATACCAAAATATCATACAGTTTATAGACCACTTGCTATCATCTATCGATCTGTATGATAATAAACACAAAGATGGTCCTATATTTCATAGATAGATTGCAGTAGTTACTATGTCTGTAAATATTTTGAAAAAAAATGTGATTTAAAATAAGGTTTGGTGGAACACATTTAGGTTGAAGGAGTGAAACACTCGGGTCCGACCAAGATGGTCCTATACTTCACAGGGGCCACTAACATTCTGTACACATTTGGGGGACATGCCGTCACTGTGTAA

mRNA sequence

ATGGAGATGGCGGAGGCAGCTGCCGAGACGACGACGACAATGACAACGACAACAGTGATAGTTGGGAAGAATAGTAATCATAACAATAATGAGCCAACCAACGCGAAAACGAAGCTCTCGAAGCTGTTTTGGCATGGGGTTCAGGTTATGATGCTTGGTTCAGTTGTGCTTCAAACCAGGTTAAACGTTAAACAATACAATTTTGTTGTTATGATGATAATACAGTGGTTTGAGGTTCTAGAGGGGCTACTAGGGAGGCGATGGAGGAACGTGGGACTAGTGTTCAATTGCACGTTTTTGTTATTCGGGTCAGTGATCCAACTAATAGCATGTGCAAGCAACATATATTACATAAATGAGAAGATTGAGAAGAGGACATGGACATACATCTTTGGAGCATGCTGTGCAACAACTGTGTTTGTTCCTTCTTTTCATAATTACAGAATTTGGTCTTTTTTGGGTCTTGCAATGACCACTTACACTGCTTGGTATCTTGCCATTGCCTCCTTCCTTCATGGCCAGGTTGAAGGAGTGAAACACTCGGGTCCGACCAAGATGGTCCTATACTTCACAGGGGCCACTAACATTCTGTACACATTTGGGGGACATGCCGTCACTGTGTAA

Coding sequence (CDS)

ATGGAGATGGCGGAGGCAGCTGCCGAGACGACGACGACAATGACAACGACAACAGTGATAGTTGGGAAGAATAGTAATCATAACAATAATGAGCCAACCAACGCGAAAACGAAGCTCTCGAAGCTGTTTTGGCATGGGGTTCAGGTTATGATGCTTGGTTCAGTTGTGCTTCAAACCAGGTTAAACGTTAAACAATACAATTTTGTTGTTATGATGATAATACAGTGGTTTGAGGTTCTAGAGGGGCTACTAGGGAGGCGATGGAGGAACGTGGGACTAGTGTTCAATTGCACGTTTTTGTTATTCGGGTCAGTGATCCAACTAATAGCATGTGCAAGCAACATATATTACATAAATGAGAAGATTGAGAAGAGGACATGGACATACATCTTTGGAGCATGCTGTGCAACAACTGTGTTTGTTCCTTCTTTTCATAATTACAGAATTTGGTCTTTTTTGGGTCTTGCAATGACCACTTACACTGCTTGGTATCTTGCCATTGCCTCCTTCCTTCATGGCCAGGTTGAAGGAGTGAAACACTCGGGTCCGACCAAGATGGTCCTATACTTCACAGGGGCCACTAACATTCTGTACACATTTGGGGGACATGCCGTCACTGTGTAA

Protein sequence

MEMAEAAAETTTTMTTTTVIVGKNSNHNNNEPTNAKTKLSKLFWHGVQVMMLGSVVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV

Homology

[Close]

BLAST of CsGy2G013240 vs. NCBI nr
Match: XP_004147069.2 (PREDICTED: auxin transporter-like protein 2 [Cucumis sativus] >KGN61915.1 hypothetical protein Csa_2G264590 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 154/223 (69.06%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           TNAKTKLSKLFWHG                           Q+ M+  +VLQ        
Sbjct: 33  TNAKTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQMGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++  +    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYKLRKQTQKPQYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. NCBI nr
Match: AVN97812.1 (auxin transporter protein, partial [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 154/223 (69.06%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           TNAKTKLSKLFWHG                           Q+ M+  +VLQ        
Sbjct: 33  TNAKTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQMGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++  +    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYKLRKQTQKPQYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. NCBI nr
Match: XP_008457668.1 (PREDICTED: auxin transporter-like protein 2 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 153/223 (68.61%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           T+A TKLSKLFWHG                           QV M+  +VLQ        
Sbjct: 33  TDAMTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQVGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++ ++    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYRLRKQTQKPHYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. NCBI nr
Match: XP_023534043.1 (auxin transporter-like protein 5 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 143/207 (69.08%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 34  NAKTKLSKLFWHG------------VQVMMLGSVVLQ--------------TRLNV---- 93
           + KTKLSKLFWHG             Q+ M+  ++LQ              T L +    
Sbjct: 10  DVKTKLSKLFWHGGSAYDAWFSCASNQLGMVSGILLQLFYGLMGSWTAYLITSLYLEYRL 69

Query: 94  ---KQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINE 153
              +Q       +IQWFEVL+GLLG+RWRNVGL FNCTFLLFGSVIQLIACASNIYYINE
Sbjct: 70  RKERQKAEFRNHVIQWFEVLDGLLGKRWRNVGLAFNCTFLLFGSVIQLIACASNIYYINE 129

Query: 154 KIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKH 208
           K++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGLAMTTYTAWYL +ASFLHGQVEGVKH
Sbjct: 130 KLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTAWYLTMASFLHGQVEGVKH 189

[Close]

BLAST of CsGy2G013240 vs. NCBI nr
Match: XP_022146211.1 (auxin transporter-like protein 5 [Momordica charantia])

HSP 1 Score: 278.1 bits (710), Expect = 2.4e-71
Identity = 144/223 (64.57%), Postives = 159/223 (71.30%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           T+ KTKLSKLFWHG                           Q+ M+  ++LQ        
Sbjct: 27  TDVKTKLSKLFWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMVSGILLQLFYGLMGS 86

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                         TR    + +F    +IQWFEVL+GLLG+RWRNVGL FNCTFLLFGS
Sbjct: 87  WTAYLITSLYLEYRTRKERHKTDF-RNHVIQWFEVLDGLLGKRWRNVGLAFNCTFLLFGS 146

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYIN+K++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 147 VIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTAWY 206

[Close]

BLAST of CsGy2G013240 vs. TAIR10
Match: AT2G21050.1 (like AUXIN RESISTANT 2)

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-71
Identity = 125/153 (81.70%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 55  VVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASN 114
           V  +TR   ++ NF    +IQWFEVL+GLLG+ WRNVGL FNCTFLLFGSVIQLIACASN
Sbjct: 96  VEYRTRKEREKVNF-RNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASN 155

Query: 115 IYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQ 174
           IYYIN+ ++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGL MTTYTAWYL IAS LHGQ
Sbjct: 156 IYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASILHGQ 215

Query: 175 VEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV 208
           VEGVKHSGP+K+VLYFTGATNILYTFGGHAVTV
Sbjct: 216 VEGVKHSGPSKLVLYFTGATNILYTFGGHAVTV 247

[Close]

BLAST of CsGy2G013240 vs. TAIR10
Match: AT1G77690.1 (like AUX1 3)

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-70
Identity = 134/223 (60.09%), Postives = 154/223 (69.06%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           ++ KTKLS  FWHG                           Q+ M+  ++ Q        
Sbjct: 30  SSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGS 89

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                         TR   ++++F    +IQWFEVL+GLLG+ WRN+GL+FNCTFLLFGS
Sbjct: 90  WTAYLISVLYVEYRTRKEREKFDF-RNHVIQWFEVLDGLLGKHWRNLGLIFNCTFLLFGS 149

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYIN+K++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGLAMTTYT+WY
Sbjct: 150 VIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTSWY 209

[Close]

BLAST of CsGy2G013240 vs. TAIR10
Match: AT2G38120.1 (Transmembrane amino acid transporter family protein)

HSP 1 Score: 258.5 bits (659), Expect = 3.6e-69
Identity = 117/135 (86.67%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 73  IIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFG 132
           +IQWFEVL+GLLG  W+ +GL FNCTFLLFGSVIQLIACASNIYYIN+ ++KRTWTYIFG
Sbjct: 119 VIQWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFG 178

Query: 133 ACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTG 192
           ACCATTVF+PSFHNYRIWSFLGL MTTYTAWYLAIAS +HGQ EGVKHSGPTK+VLYFTG
Sbjct: 179 ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASIIHGQAEGVKHSGPTKLVLYFTG 238

Query: 193 ATNILYTFGGHAVTV 208
           ATNILYTFGGHAVTV
Sbjct: 239 ATNILYTFGGHAVTV 253

[Close]

BLAST of CsGy2G013240 vs. TAIR10
Match: AT5G01240.1 (like AUXIN RESISTANT 1)

HSP 1 Score: 258.1 bits (658), Expect = 4.7e-69
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 73  IIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFG 132
           +IQWFEVL+GLLG  W+  GL FNCTFLLFGSVIQLIACASNIYYIN++++KRTWTYIFG
Sbjct: 125 VIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFG 184

Query: 133 ACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTG 192
           ACCATTVF+PSFHNYRIWSFLGL MTTYTAWYL IASFLHGQ EGV HSGPTK+VLYFTG
Sbjct: 185 ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASFLHGQAEGVTHSGPTKLVLYFTG 244

Query: 193 ATNILYTFGGHAVTV 208
           ATNILYTFGGHAVTV
Sbjct: 245 ATNILYTFGGHAVTV 259

[Close]

BLAST of CsGy2G013240 vs. Swiss-Prot
Match: sp|Q9S836|LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LAX2 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 125/153 (81.70%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 55  VVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASN 114
           V  +TR   ++ NF    +IQWFEVL+GLLG+ WRNVGL FNCTFLLFGSVIQLIACASN
Sbjct: 96  VEYRTRKEREKVNF-RNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASN 155

Query: 115 IYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQ 174
           IYYIN+ ++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGL MTTYTAWYL IAS LHGQ
Sbjct: 156 IYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIASILHGQ 215

Query: 175 VEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV 208
           VEGVKHSGP+K+VLYFTGATNILYTFGGHAVTV
Sbjct: 216 VEGVKHSGPSKLVLYFTGATNILYTFGGHAVTV 247

[Close]

BLAST of CsGy2G013240 vs. Swiss-Prot
Match: sp|Q9CA25|LAX3_ARATH (Auxin transporter-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LAX3 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-69
Identity = 134/223 (60.09%), Postives = 154/223 (69.06%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           ++ KTKLS  FWHG                           Q+ M+  ++ Q        
Sbjct: 30  SSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGS 89

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                         TR   ++++F    +IQWFEVL+GLLG+ WRN+GL+FNCTFLLFGS
Sbjct: 90  WTAYLISVLYVEYRTRKEREKFDF-RNHVIQWFEVLDGLLGKHWRNLGLIFNCTFLLFGS 149

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYIN+K++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGLAMTTYT+WY
Sbjct: 150 VIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLAMTTYTSWY 209

[Close]

BLAST of CsGy2G013240 vs. Swiss-Prot
Match: sp|Q8L883|LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula OX=3880 GN=LAX5 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-68
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 55  VVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASN 114
           V  +TR   ++ NF    +IQWFEVL+GLLG+ WRNVGL FNCTFLLFGSVIQLIACASN
Sbjct: 98  VEYRTRKEREKVNF-RSHVIQWFEVLDGLLGKHWRNVGLGFNCTFLLFGSVIQLIACASN 157

Query: 115 IYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQ 174
           IYYIN+ ++KRTWTYIFGACCATTVF+PSFHNYRIWSFLGL MTTYTAWYL IA+ LHGQ
Sbjct: 158 IYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLTIAAVLHGQ 217

Query: 175 VEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV 208
           VEGVKHSGP K++LYFTGATNILYTFGGHAVTV
Sbjct: 218 VEGVKHSGPNKIILYFTGATNILYTFGGHAVTV 249

[Close]

BLAST of CsGy2G013240 vs. Swiss-Prot
Match: sp|Q7XGU4|LAX13_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0147400 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68
Identity = 117/135 (86.67%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 73  IIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFG 132
           +IQWFEVL+GLLGR WRNVGL FNCTFLLFGSVIQLI CASNIYYIN+ ++KRTWTYIFG
Sbjct: 134 VIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIGCASNIYYINDHLDKRTWTYIFG 193

Query: 133 ACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTG 192
           ACCATTVF+PSFHNYRIWSFLGL MTTYTAWY+A+AS +HGQVEGV HSGPT +VLYFTG
Sbjct: 194 ACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYIAVASLIHGQVEGVAHSGPTSIVLYFTG 253

Query: 193 ATNILYTFGGHAVTV 208
           ATNILYTFGGHAVTV
Sbjct: 254 ATNILYTFGGHAVTV 268

[Close]

BLAST of CsGy2G013240 vs. Swiss-Prot
Match: sp|Q9FEL6|LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula OX=3880 GN=LAX3 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-68
Identity = 117/135 (86.67%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 73  IIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFG 132
           +IQWFEVL+GLLG+ WRN+GL FNCTFLLFGSVIQLIACASNIYYIN+ ++KRTWTYIFG
Sbjct: 112 VIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFG 171

Query: 133 ACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTG 192
           ACCATTVF+PSFHNYRIWSFLGL MTTYTAWY+ IAS LHGQ E VKHSGPTK+VLYFTG
Sbjct: 172 ACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASILHGQAEDVKHSGPTKLVLYFTG 231

Query: 193 ATNILYTFGGHAVTV 208
           ATNILYTFGGHAVTV
Sbjct: 232 ATNILYTFGGHAVTV 246

[Close]

BLAST of CsGy2G013240 vs. TrEMBL
Match: tr|A0A2P1JH91|A0A2P1JH91_CUCSA (Auxin transporter protein (Fragment) OS=Cucumis sativus OX=3659 GN=ns PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.3e-76
Identity = 154/223 (69.06%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           TNAKTKLSKLFWHG                           Q+ M+  +VLQ        
Sbjct: 33  TNAKTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQMGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++  +    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYKLRKQTQKPQYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. TrEMBL
Match: tr|A0A0A0LJ42|A0A0A0LJ42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264590 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.3e-76
Identity = 154/223 (69.06%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           TNAKTKLSKLFWHG                           Q+ M+  +VLQ        
Sbjct: 33  TNAKTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQMGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++  +    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYKLRKQTQKPQYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. TrEMBL
Match: tr|A0A1S3C601|A0A1S3C601_CUCME (auxin transporter-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497313 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.3e-76
Identity = 153/223 (68.61%), Postives = 161/223 (72.20%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHG--------------------------VQVMMLGSVVLQ-------- 92
           T+A TKLSKLFWHG                           QV M+  +VLQ        
Sbjct: 33  TDAMTKLSKLFWHGGSGYDAWFSCASNQVAQVLLTLPYSFSQVGMVSGIVLQLLYGLMGS 92

Query: 93  --------------TRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152
                          R   ++ ++    +IQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS
Sbjct: 93  WTAYLITSLYLEYRLRKQTQKPHYFTNHVIQWFEVLEGLLGRRWRNVGLVFNCTFLLFGS 152

Query: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 208
           VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY
Sbjct: 153 VIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWY 212

[Close]

BLAST of CsGy2G013240 vs. TrEMBL
Match: tr|B9RJ49|B9RJ49_RICCO (Amino acid transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_1031400 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.0e-71
Identity = 130/175 (74.29%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 33  TNAKTKLSKLFWHGVQVMMLGSVVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVG 92
           ++ K KLS  FWHG  V    +   + +++ + +      +IQWFEVL+GLLG+ WRN G
Sbjct: 25  SSTKGKLSNFFWHGGSVYDAWTRKEREKVDFRNH------VIQWFEVLDGLLGKHWRNAG 84

Query: 93  LVFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSF 152
           L FNCTFLLFGSVIQLIACASNIYYIN+ ++KRTWTYIFGACCATTVF+PSFHNYRIWSF
Sbjct: 85  LFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSF 144

Query: 153 LGLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV 208
           LGL MTTYTAWYL IASFLHGQVEGVKHSGP KMVLYFTGATNILYTFGGHAVTV
Sbjct: 145 LGLMMTTYTAWYLTIASFLHGQVEGVKHSGPAKMVLYFTGATNILYTFGGHAVTV 193

[Close]

BLAST of CsGy2G013240 vs. TrEMBL
Match: tr|A0A2I0I3N8|A0A2I0I3N8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041152 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 8.8e-70
Identity = 131/174 (75.29%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 36  KTKLSKLFWHGVQV--MMLGSVVLQTRLNVKQYNFVVMMIIQWFEVLEGLLGRRWRNVGL 95
           K +LS+LFWHG  V    +  V  +TR   ++ +F    +IQWFEVL+GLLG+ WRN+GL
Sbjct: 28  KGRLSRLFWHGGSVYDACVLYVEYRTRKERQKVDF-RNHVIQWFEVLDGLLGKHWRNIGL 87

Query: 96  VFNCTFLLFGSVIQLIACASNIYYINEKIEKRTWTYIFGACCATTVFVPSFHNYRIWSFL 155
            FNCTFLLFGSVIQLIACASNIYYIN+ ++KRTWTYIFGACCATTVF+PSFHNYRIWSFL
Sbjct: 88  FFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFL 147

Query: 156 GLAMTTYTAWYLAIASFLHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTV 208
           GL MTTYTAWYL IAS LHGQ+EGVKHSGP+ MVLYFTGATNILYTFGGHAVTV
Sbjct: 148 GLLMTTYTAWYLTIASLLHGQIEGVKHSGPSSMVLYFTGATNILYTFGGHAVTV 200

The following BLAST results are available for this feature:

BLAST of CsGy2G013240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147069.2	1.9e-76	69.06	PREDICTED: auxin transporter-like protein 2 [Cucumis sativus] >KGN61915.1 hypoth...	[more]
AVN97812.1	1.9e-76	69.06	auxin transporter protein, partial [Cucumis sativus]	[more]
XP_008457668.1	1.2e-75	68.61	PREDICTED: auxin transporter-like protein 2 [Cucumis melo]	[more]
XP_023534043.1	8.4e-72	69.08	auxin transporter-like protein 5 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022146211.1	2.4e-71	64.57	auxin transporter-like protein 5 [Momordica charantia]	[more]

BLAST of CsGy2G013240 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21050.1	6.6e-71	81.70	like AUXIN RESISTANT 2	[more]
AT1G77690.1	1.1e-70	60.09	like AUX1 3	[more]
AT2G38120.1	3.6e-69	86.67	Transmembrane amino acid transporter family protein	[more]
AT5G01240.1	4.7e-69	86.67	like AUXIN RESISTANT 1	[more]

BLAST of CsGy2G013240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S836\|LAX2_ARATH	1.2e-69	81.70	Auxin transporter-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LAX2 PE=2 SV...	[more]
sp\|Q9CA25\|LAX3_ARATH	2.0e-69	60.09	Auxin transporter-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LAX3 PE=2 SV...	[more]
sp\|Q8L883\|LAX5_MEDTR	1.0e-68	80.39	Auxin transporter-like protein 5 OS=Medicago truncatula OX=3880 GN=LAX5 PE=2 SV=...	[more]
sp\|Q7XGU4\|LAX13_ORYSJ	1.3e-68	86.67	Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os1...	[more]
sp\|Q9FEL6\|LAX3_MEDTR	2.2e-68	86.67	Auxin transporter-like protein 3 OS=Medicago truncatula OX=3880 GN=LAX3 PE=2 SV=...	[more]

BLAST of CsGy2G013240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P1JH91\|A0A2P1JH91_CUCSA	1.3e-76	69.06	Auxin transporter protein (Fragment) OS=Cucumis sativus OX=3659 GN=ns PE=4 SV=1	[more]
tr\|A0A0A0LJ42\|A0A0A0LJ42_CUCSA	1.3e-76	69.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G264590 PE=4 SV=1	[more]
tr\|A0A1S3C601\|A0A1S3C601_CUCME	8.3e-76	68.61	auxin transporter-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497313 PE=4 SV...	[more]
tr\|B9RJ49\|B9RJ49_RICCO	8.0e-71	74.29	Amino acid transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_1031400 PE=...	[more]
tr\|A0A2I0I3N8\|A0A2I0I3N8_PUNGR	8.8e-70	75.29	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041152 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G013240.1	CsGy2G013240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 73..206 e-value: 1.2E-18 score: 67.0
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 69..207
None	No IPR available	PANTHER	PTHR22950:SF317	SUBFAMILY NOT NAMED	coord: 69..207

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy2G013240	CsGy7G000710	Cucumber (Gy14) v2	cgybcgybB071

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G013240	Cucurbita moschata (Rifu)	cgybcmoB150
CsGy2G013240	Cucumber (Gy14) v2	cgybcgybB061
CsGy2G013240	Cucurbita maxima (Rimu)	cgybcmaB165
CsGy2G013240	Cucurbita maxima (Rimu)	cgybcmaB200
CsGy2G013240	Cucurbita maxima (Rimu)	cgybcmaB208
CsGy2G013240	Cucurbita maxima (Rimu)	cgybcmaB218
CsGy2G013240	Cucurbita maxima (Rimu)	cgybcmaB256
CsGy2G013240	Cucurbita moschata (Rifu)	cgybcmoB194
CsGy2G013240	Cucurbita moschata (Rifu)	cgybcmoB202
CsGy2G013240	Cucurbita moschata (Rifu)	cgybcmoB209
CsGy2G013240	Cucurbita pepo (Zucchini)	cgybcpeB185
CsGy2G013240	Cucurbita pepo (Zucchini)	cgybcpeB193
CsGy2G013240	Cucurbita pepo (Zucchini)	cgybcpeB226
CsGy2G013240	Cucurbita pepo (Zucchini)	cgybcpeB234
CsGy2G013240	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G013240	Cucumber (Chinese Long) v2	cgybcuB080
CsGy2G013240	Cucumber (Chinese Long) v2	cgybcuB086
CsGy2G013240	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G013240	Bottle gourd (USVL1VR-Ls)	cgyblsiB090
CsGy2G013240	Bottle gourd (USVL1VR-Ls)	cgyblsiB100
CsGy2G013240	Melon (DHL92) v3.5.1	cgybmeB084
CsGy2G013240	Melon (DHL92) v3.5.1	cgybmeB088
CsGy2G013240	Melon (DHL92) v3.5.1	cgybmeB133
CsGy2G013240	Melon (DHL92) v3.6.1	cgybmedB079
CsGy2G013240	Melon (DHL92) v3.6.1	cgybmedB084
CsGy2G013240	Watermelon (Charleston Gray)	cgybwcgB115
CsGy2G013240	Watermelon (Charleston Gray)	cgybwcgB122
CsGy2G013240	Watermelon (97103) v1	cgybwmB129
CsGy2G013240	Watermelon (97103) v1	cgybwmB133
CsGy2G013240	Watermelon (97103) v1	cgybwmB141
CsGy2G013240	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G013240	Wild cucumber (PI 183967)	cgybcpiB081
CsGy2G013240	Wild cucumber (PI 183967)	cgybcpiB086
CsGy2G013240	Silver-seed gourd	carcgybB0325
CsGy2G013240	Silver-seed gourd	carcgybB0356
CsGy2G013240	Silver-seed gourd	carcgybB0999
CsGy2G013240	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G013240	Cucumber (Chinese Long) v3	cgybcucB093
CsGy2G013240	Watermelon (97103) v2	cgybwmbB110
CsGy2G013240	Watermelon (97103) v2	cgybwmbB117
CsGy2G013240	Wax gourd	cgybwgoB146
CsGy2G013240	Wax gourd	cgybwgoB175