Cp4.1LG20g07890 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG20g07890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ran-binding protein 1
Location	Cp4.1LG20 : 7878285 .. 7881926 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGATAAATCCAAAGAGGGCAGTGTGGGTTCTCTCTCATTCTCACTTATTTTATTTCTTACATATAAAAACCCTAATCTTTTCTTCTCTCACTTTCATTGCCTTCCCCCAAATTCCGATCCCTTTCTCTGCAACAACAAAGCTTCATCTATGGCCAGCGCCGATTCCGAACGTAGAGACACTGAGGAGGCTCCTGCCGGCGAGGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGAGGTCGTCGTTACCACCGGTGAAGAAAATGAGGACGCTGTTCTCGATCTGTACGCTTTTCTCTATCTAAATCTTGTTTTTATCAAATTTACGTTTTGGTTCGTTAGTGTGATTTGTTTCTTGCCGGTTATTCACTGTTTTAGGAAGGCAAAACTGTACCGATTCGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGGTTCGTTCTCGATTCATGTGCATCCAATTTAGTTCCTTTGAGTTCTATAGTTAATTGTTTGGTTGTTGTGCTTTTGTAGTGCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAGTCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAATTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAGTGAGTACAATTTTGCAACTTTTTTCCCTGAAATTATGCTGCAGGTTAGACTGGCTGATGGATTCTTTGAGGCTTTTTTTGTTTTTGGTTTTATTTTGAATCCATGATAGCAGGGCATTATCAATAAGATGATAGATGTTCTATCGTATGGCATGTTGTTGTGGTCTTTTCCTTCTCCTTATAGAACTGCTAAAATCTCTAGTTATCTAATTCACTATTCATTTTAAATAATAAAAAAAAAACATTATTCATAAGGAGAAGGAAAAGATAGGGATTGTCTTATTTTGATAATATAGGGTTTGTCTTGGGCCTCTTCAACACTTTTTTTCCTCGACTTGACCATTGATAATAATCCTTTGGTTTTTGACTGACATTTTTTCTTTTAATAAGATAGGGATTGTTTGGTTTCATTAGTTATCTAATTCTGAACATTCTTTTATCCTGATTCGTGTGTGACACTGTGACAGTAGCAGAGTCGGAGTTTGGCTGCACCAAAAGAAAAAAGTGTTGAGTTTTATTTTATTTAATGAGATTTTTCTAAGAGGATTTGATTAGGAAAAGAGGGCGAAGAGGAGAGTGGTTTTAATGGTGCCTAGAGAAAATTTTTGTGGTGTCAACTTAGGAGATAGGCGGGTAAAGTGGAAGATGAACTGACATTTTATTTTATGGCATGCAAAGAATTAAATTTAGTTGTTAAAGTGGGTAATTGGAGTACTTATTGTGATTAGAGGATTGCGACAGTGGCAGAGTAGGAGGATTGGAAGGTGAAATGAAAGAAGCAATTTGGATTTTCTTCGTTCCCTGGGATAGATCACTTTGCATAAGTTATATCTAGATCCCGGTTTGATTTGGATGGTCATAATTCCGTTGTTTTAAATTGTTTATCTAGACCAATTTAAGAAGCATATTTCACGATAAATCAAGTTCCCTGACATCCAATTAATTCCCTTGATTTATTAGTTTAAATCATTTATCTCCTGTCGTAGGAGATTGTCCATGTTCACTCATCACAATCTTTTATTGTTGTGTCTTCAATGAATATCTGTCAGTCAAATTTACATGGGAATTAAATTAGGTTACTTATCGTTGCAACTCTTGATGAGATAGGAGCATTAGATAAATGATAAATCAAGGAGTATTCTTTTTCCTTCTGTGGGGGCGGTGTGGTAGTACTTACTTCTAAACTAACAAAAGTTAAAAGGTTTTGTAGGTAACCTTTCATTCATTTGTATTAGTTGTGCTCATAAAAATCTTGGAAGTCATTTTACTACTTTTCCTTTTTTAATTTTAATGTTATTTTAAACCAAATCTTACCTCTTTTTTTTATCATTTCTAGAATTTTGTGATTTCCTTTAATTGTCCTGGAACTGATCATTGGATATATGGAGCATATCTAGGTTTTAAAAATCTAAAAATTCTACCTACACCCAGGTGTCGTTAAGACATAAATCTTTGACCAAGAGGTCAGAGGTTTGAATCTCCCACTCACACATGTGGTTGCACTCCAAAAAATAATAATTCTAGCACTTGTAAAGATTTGTAGAGCATTGCTGATTGAATGTTCATGTAATCATTTTTATTCTATATTAAGAAATATAGTTGGTTTACATTCCCTTGGTAACAAATACTCTATTTGTCTCAGACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCTGCTGGATTACTCGAGAAATTGAGTGTCGAAGAAAAGAAAGGTGAAGATAAAGCTGGGGAGACACCTTCGAAAACTAAGGAGGAGGATGAGCCCAAGGGGGGTGAGGCAGAAAAATCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGCTGAGGAGGAGGATATATCAGAGATTTTGATGAAGAAGTTGACCTCTCTTCCATCCATGTCTGTCTTGGTACATTTAAACATAATAGTCAGTCAGTTCTTGGTTGGATTTCTTTCTGGGGTGGGGGAGAGAGTGGGAGTCGTCGTCGTCTGTCTAAATTGTACTTTGGTTGGTTGGAGTCCCTTTCCATTTCTTTTTTCCTTTTAAAAAAATGAGATTTCGAGTCACTGTCGATGTCGAATGGAGTGGGTAGTGTGGTGAAAGAAAGAGTTCCAGAATTCATATTCATTCAGGGATAGTATGGAGTTTGTGTGCAGGAGGACCTGAGCTGAAGATGCTGCAAAAGAGGTTAGAAGTCAAACAAGAGTGAGTAATTTGCAGAAGACATATATATTATATATATACACACACTTATTTTTGCTTGGTTTGTTCAGTGCCGGAGATTTTTGCCTTCCGGATGATGAAAAAATATGATTGTCTTGTGGTATTTTATTTGAAGTTTTAGCTCTTTTGTTGTGCGGTGCGTTGCTTTGCTTTGCTTTGCTTAAGTTAGTGTGTCAATGTTTCAATGCAATGAAATTAAAAGGGGGAGAATGTAACCGCATAAGTCACCGCCCTGTTTGTAACAGCTCAAGCTCAAGCCCACCGTTAGTAGATTTTGTGGCTAGGGTTTCTCTTCTCTGCTATAGAATAATGCTCTATGGTTTTACCGCTTAACACGATCTAAACTCAAAATCACAGGCTTCCTCAGAGGCATCTTGAAGAGGAGAGTCAAAATCAGAACCATGTCGATTAAGGTGAATAGAAGCTAAATCATCTTGATGCTAGTCAGTCTGCAGGTGGGCGTTGTAGCTTCAGGAACCTTTATGGTGGTTTTGGGTGAAACCTTTCCAAGGAGGAAGTGGGAGAAAAATACCCTAAATTCACTATAGTCAAACGGAGACAGAAAATTCTTCTTTTTGTTTTTTTTTTTTTTTTTGTTAAATTAATAAAAATACCATAAAATTCGCACTTTGTCTA

mRNA sequence

AAAAGATAAATCCAAAGAGGGCAGTGTGGGTTCTCTCTCATTCTCACTTATTTTATTTCTTACATATAAAAACCCTAATCTTTTCTTCTCTCACTTTCATTGCCTTCCCCCAAATTCCGATCCCTTTCTCTGCAACAACAAAGCTTCATCTATGGCCAGCGCCGATTCCGAACGTAGAGACACTGAGGAGGCTCCTGCCGGCGAGGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGAGGTCGTCGTTACCACCGGTGAAGAAAATGAGGACGCTGTTCTCGATCTGAAGGCAAAACTGTACCGATTCGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAGTCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAATTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCTGCTGGATTACTCGAGAAATTGAGTGTCGAAGAAAAGAAAGGTGAAGATAAAGCTGGGGAGACACCTTCGAAAACTAAGGAGGAGGATGAGCCCAAGGGGGGTGAGGCAGAAAAATCAGATGCAGAGAAGAAGAATGATGAGTAGCCTGCTGAGGAGGAGGATATATCAGAGATTTTGATGAAGAAGTTGACCTCTCTTCCATCCATGTCTGTCTTGGTACATTTAAACATAATAGTCAGTCAGTTCTTGGTTGGATTTCTTTCTGGGGTGGGGGAGAGAGTGGGAGTCGTCGTCGTCTGTCTAAATTGTACTTTGGTTGGTTGGAGTCCCTTTCCATTTCTTTTTTCCTTTTAAAAAAATGAGATTTCGAGTCACTGTCGATGTCGAATGGAGTGGGTAGTGTGGTGAAAGAAAGAGTTCCAGAATTCATATTCATTCAGGGATAGTATGGAGTTTGTGTGCAGGAGGACCTGAGCTGAAGATGCTGCAAAAGAGGTTAGAAGTCAAACAAGAGCTTCCTCAGAGGCATCTTGAAGAGGAGAGTCAAAATCAGAACCATGTCGATTAAGGTGAATAGAAGCTAAATCATCTTGATGCTAGTCAGTCTGCAGGTGGGCGTTGTAGCTTCAGGAACCTTTATGGTGGTTTTGGGTGAAACCTTTCCAAGGAGGAAGTGGGAGAAAAATACCCTAAATTCACTATAGTCAAACGGAGACAGAAAATTCTTCTTTTTGTTTTTTTTTTTTTTTTTGTTAAATTAATAAAAATACCATAAAATTCGCACTTTGTCTA

Coding sequence (CDS)

ATGGCCAGCGCCGATTCCGAACGTAGAGACACTGAGGAGGCTCCTGCCGGCGAGGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGAGGTCGTCGTTACCACCGGTGAAGAAAATGAGGACGCTGTTCTCGATCTGAAGGCAAAACTGTACCGATTCGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGCTTCCATCAATGACGGTTCAAGAACACGCTGGAAATGATAAGTCGTGCGTGTGGCATGCGACTGACTTCGCTGATGGAGAATTGAAAGATGAGCTTTTCTGTATCAGATTCCCATCTATTGAGAACTGCAAATCTTTCATGGAAACGTTCCAAGAAATTGCCGAGTCCCAACAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCTGCTGGATTACTCGAGAAATTGAGTGTCGAAGAAAAGAAAGGTGAAGATAAAGCTGGGGAGACACCTTCGAAAACTAAGGAGGAGGATGAGCCCAAGGGGGGTGAGGCAGAAAAATCAGATGCAGAGAAGAAGAATGATGAGTAG

Protein sequence

MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE

Homology

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BLAST of Cp4.1LG20g07890 vs. Swiss-Prot
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77
Identity = 158/217 (72.81%), Postives = 179/217 (82.49%), Query Frame = 1


Query: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64
           + E RD EEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDAVLDLK+KLYRFDKD NQW
Sbjct: 7   EHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQW 66

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124
           KERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEH GN+KSCVWHA DF
Sbjct: 67  KERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDF 126

Query: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKG 184
           ADGELKDELFCIRF SIENCK+FM+ F+E+AES+++KEE+KDA+  AGLLEKL+VEE K 
Sbjct: 127 ADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKT 186

Query: 185 ED----KAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           E+    KA ET     + +E K  EAEKS   KK +E
Sbjct: 187 EEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Cp4.1LG20g07890 vs. Swiss-Prot
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 2.0e-75
Identity = 146/205 (71.22%), Postives = 174/205 (84.88%), Query Frame = 1


Query: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64
           + E RD EE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED +LDLK+KLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEHAGNDKSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKG 184
           +DGELKDELFCIRF S+ENCK+FM+ F+E+AES+++KEE+KDAS  AGLLEKL+VEEK+ 
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKES 188

Query: 185 EDKAGETPSKTKEEDEPKGGEAEKS 210
           E K  E   + K+ +  +  + E+S
Sbjct: 189 EKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of Cp4.1LG20g07890 vs. Swiss-Prot
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.8e-73
Identity = 154/219 (70.32%), Postives = 175/219 (79.91%), Query Frame = 1


Query: 1   MASADSERRDTE-EAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDK 60
           MAS + ER + E E    EDEDTGAQVAPIV+LEEV VTTGEE+EDAVLDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH+GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCK+FME F EIAESQQ  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKGEDKAGETPSK--TKEEDEPKGGEAEKSDAEKKND 217
           EE   E+KA E   K   KE+ E K    EK + EKK +
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETK---KEKVEEEKKTE 216

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BLAST of Cp4.1LG20g07890 vs. Swiss-Prot
Match: RANG_SCHPO (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sbp1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 2   ASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDG 61
           AS + E++  E     E         PIVKL  V   T EE E     ++AKL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH- 121
           ++WKERG G  + LKHKETGK RLVMR+ KTLK+CANHL++P M +  + G+D+S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQK 161
           A D ++GE   E F IRF + EN   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]

BLAST of Cp4.1LG20g07890 vs. Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.6e-30
Identity = 65/138 (47.10%), Postives = 91/138 (65.94%), Query Frame = 1


Query: 17   GEDEDTGAQVAPIVKL-EEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 76
            G+D+D G    P+V L +++ V TGEE+E+     +AKL+RFD +  +WKERG G VK L
Sbjct: 1163 GDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKIL 1222

Query: 77   KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 136
            +HK +GK+RL+MR+ + LKICANH + P M +  +AG+D+S VWHA D+AD   K E   
Sbjct: 1223 RHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLA 1282

Query: 137  IRFPSIENCKSFMETFQE 154
            IRF + E    F   F+E
Sbjct: 1283 IRFKTPEEAALFKCKFEE 1300

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BLAST of Cp4.1LG20g07890 vs. TrEMBL
Match: A0A0A0LV78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532330 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.0e-99
Identity = 199/217 (91.71%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS DSERRD EEAPAGEDEDTGAQVAPIVKLE V VTTGEE+ED VLDLKAKLYRFDKD
Sbjct: 1   MASTDSERRDDEEAPAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHK+TGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKK ENKDASAAAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVE 180

Query: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EKK EDKA E P+K K+EDEPK GE EKS+AEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKVKKEDEPK-GEPEKSEAEKKNDE 216

[Close]

BLAST of Cp4.1LG20g07890 vs. TrEMBL
Match: A0A0A0LXN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.6e-92
Identity = 186/220 (84.55%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS+D+ERR+ EEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCK+FMETFQE+AESQ+KK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 -----EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKN 216
                E K EDKA +TP K+KEED+P+ GEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPE-GEAGKSDAEKKD 219

[Close]

BLAST of Cp4.1LG20g07890 vs. TrEMBL
Match: W9RUR3_9ROSA (Ran-binding protein 1-b-like protein OS=Morus notabilis GN=L484_007590 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.5e-87
Identity = 173/217 (79.72%), Postives = 190/217 (87.56%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           M+S D E R+ E+APA +DEDTGAQVAPIVKLEEV V+TGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MSSNDPEHREEEDAPAADDEDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           A DFADGELKDELFCIRFPS+ENCK FME FQE+AESQQKKEENKDASAAAGLLEKLSVE
Sbjct: 121 AADFADGELKDELFCIRFPSVENCKQFMEKFQEVAESQQKKEENKDASAAAGLLEKLSVE 180

Query: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EKK E+K  E      +ED+    +  K D EKK++E
Sbjct: 181 EKKTEEKTSEEAPAVAKEDKDVKSDTVKEDIEKKDEE 217

[Close]

BLAST of Cp4.1LG20g07890 vs. TrEMBL
Match: B5AJV3_CUCMN (Ran-binding protein 1 OS=Cucumis melo var. cantalupensis PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.5e-87
Identity = 168/189 (88.89%), Postives = 181/189 (95.77%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS+D+ERR+ EEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCK+FMETFQE+AESQ+KK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 -EKKGEDKA 189
            EKK EDK+
Sbjct: 181 DEKKAEDKS 189

[Close]

BLAST of Cp4.1LG20g07890 vs. TrEMBL
Match: A0A061GXD7_THECC (Ran-binding protein 1 b OS=Theobroma cacao GN=TCM_042170 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.0e-86
Identity = 175/214 (81.78%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64
           D E R+ E+APA EDEDTGAQV PIVKLEEV V+TGEENED +LDLK+KLYRFDKDG+QW
Sbjct: 7   DHEHREDEDAPAAEDEDTGAQVVPIVKLEEVAVSTGEENEDPILDLKSKLYRFDKDGSQW 66

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124
           KERGAGTVK LKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSC+WHA+DF
Sbjct: 67  KERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCLWHASDF 126

Query: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKG 184
           ADGELKDELFCIRF S+E+CK+FME FQE+AESQ+ KEENKDASAAAGLLEKLSVEEKK 
Sbjct: 127 ADGELKDELFCIRFASVEHCKTFMEMFQEVAESQKPKEENKDASAAAGLLEKLSVEEKKT 186

Query: 185 EDKAG-ETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EDKAG E P+  KEE+E K  E EK+D EKK+ E
Sbjct: 187 EDKAGEEKPAAAKEENETKKDE-EKADTEKKDGE 219

[Close]

BLAST of Cp4.1LG20g07890 vs. TAIR10
Match: AT1G07140.1 (AT1G07140.1 Pleckstrin homology (PH) domain superfamily protein)

HSP 1 Score: 290.8 bits (743), Expect = 6.9e-79
Identity = 158/217 (72.81%), Postives = 179/217 (82.49%), Query Frame = 1


Query: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64
           + E RD EEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDAVLDLK+KLYRFDKD NQW
Sbjct: 7   EHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQW 66

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124
           KERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEH GN+KSCVWHA DF
Sbjct: 67  KERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDF 126

Query: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKG 184
           ADGELKDELFCIRF SIENCK+FM+ F+E+AES+++KEE+KDA+  AGLLEKL+VEE K 
Sbjct: 127 ADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKT 186

Query: 185 ED----KAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           E+    KA ET     + +E K  EAEKS   KK +E
Sbjct: 187 EEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Cp4.1LG20g07890 vs. TAIR10
Match: AT2G30060.1 (AT2G30060.1 Pleckstrin homology (PH) domain superfamily protein)

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-76
Identity = 146/205 (71.22%), Postives = 174/205 (84.88%), Query Frame = 1


Query: 5   DSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQW 64
           + E RD EE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED +LDLK+KLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDF 124
           KERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEHAGNDKSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVEEKKG 184
           +DGELKDELFCIRF S+ENCK+FM+ F+E+AES+++KEE+KDAS  AGLLEKL+VEEK+ 
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKES 188

Query: 185 EDKAGETPSKTKEEDEPKGGEAEKS 210
           E K  E   + K+ +  +  + E+S
Sbjct: 189 EKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of Cp4.1LG20g07890 vs. TAIR10
Match: AT5G58590.1 (AT5G58590.1 RAN binding protein 1)

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-74
Identity = 154/219 (70.32%), Postives = 175/219 (79.91%), Query Frame = 1


Query: 1   MASADSERRDTE-EAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDK 60
           MAS + ER + E E    EDEDTGAQVAPIV+LEEV VTTGEE+EDAVLDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH+GN+KSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SIENCK+FME F EIAESQQ  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKGEDKAGETPSK--TKEEDEPKGGEAEKSDAEKKND 217
           EE   E+KA E   K   KE+ E K    EK + EKK +
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETK---KEKVEEEKKTE 216

[Close]

BLAST of Cp4.1LG20g07890 vs. NCBI nr
Match: gi|659115038|ref|XP_008457356.1| (PREDICTED: ran-binding protein 1 homolog a-like [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 1.9e-99
Identity = 200/217 (92.17%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MA++DSERRD EEA AGEDEDTGAQVAPIVKLE V VTTGEE+EDAVLDLKAKLYRFDKD
Sbjct: 1   MATSDSERRDDEEAHAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHK+TGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLEKLSVE 180

Query: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EKK EDKA E P+K K+EDEPK GE EKSDAEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKAKKEDEPK-GEPEKSDAEKKNDE 216

[Close]

BLAST of Cp4.1LG20g07890 vs. NCBI nr
Match: gi|449455021|ref|XP_004145252.1| (PREDICTED: ran-binding protein 1 homolog a-like [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99
Identity = 199/217 (91.71%), Postives = 204/217 (94.01%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS DSERRD EEAPAGEDEDTGAQVAPIVKLE V VTTGEE+ED VLDLKAKLYRFDKD
Sbjct: 1   MASTDSERRDDEEAPAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHK+TGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKK ENKDASAAAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVE 180

Query: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EKK EDKA E P+K K+EDEPK GE EKS+AEKKNDE
Sbjct: 181 EKKTEDKAEEEPAKVKKEDEPK-GEPEKSEAEKKNDE 216

[Close]

BLAST of Cp4.1LG20g07890 vs. NCBI nr
Match: gi|659115040|ref|XP_008457357.1| (PREDICTED: ran-binding protein 1 homolog a-like [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 186/220 (84.55%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS+D+ERR+ EEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCK+FMETFQE+AESQ+KK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 -----EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKN 216
                E K EDKA +TP K+KEED+P+ GEA KSDAEKK+
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPE-GEAGKSDAEKKD 219

[Close]

BLAST of Cp4.1LG20g07890 vs. NCBI nr
Match: gi|703123279|ref|XP_010102783.1| (Ran-binding protein 1-b-like protein [Morus notabilis])

HSP 1 Score: 329.3 bits (843), Expect = 5.0e-87
Identity = 173/217 (79.72%), Postives = 190/217 (87.56%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           M+S D E R+ E+APA +DEDTGAQVAPIVKLEEV V+TGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MSSNDPEHREEEDAPAADDEDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHAGNDKSCVWH
Sbjct: 61  GNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHAGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           A DFADGELKDELFCIRFPS+ENCK FME FQE+AESQQKKEENKDASAAAGLLEKLSVE
Sbjct: 121 AADFADGELKDELFCIRFPSVENCKQFMEKFQEVAESQQKKEENKDASAAAGLLEKLSVE 180

Query: 181 EKKGEDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 218
           EKK E+K  E      +ED+    +  K D EKK++E
Sbjct: 181 EKKTEEKTSEEAPAVAKEDKDVKSDTVKEDIEKKDEE 217

[Close]

BLAST of Cp4.1LG20g07890 vs. NCBI nr
Match: gi|778661748|ref|XP_011658664.1| (PREDICTED: LOW QUALITY PROTEIN: ran-binding protein 1 homolog a-like [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 6.5e-87
Identity = 168/189 (88.89%), Postives = 181/189 (95.77%), Query Frame = 1


Query: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60
           MAS+D+ERR+ EEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDA+LDLK+KLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCK+FMETFQE+AESQ+KK ENKDASAAAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 -EKKGEDKA 189
            EKK EDK+
Sbjct: 181 DEKKAEDKS 189

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBP1A_ARATH	1.2e-77	72.81	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1	[more]
RBP1B_ARATH	2.0e-75	71.22	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2	[more]
RBP1C_ARATH	1.8e-73	70.32	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1	[more]
RANG_SCHPO	1.7e-31	45.63	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
RBP2_HUMAN	5.6e-30	47.10	E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2	[more]

BLAST of Cp4.1LG20g07890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV78_CUCSA	3.0e-99	91.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532330 PE=4 SV=1	[more]
A0A0A0LXN6_CUCSA	1.6e-92	84.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G532320 PE=4 SV=1	[more]
W9RUR3_9ROSA	3.5e-87	79.72	Ran-binding protein 1-b-like protein OS=Morus notabilis GN=L484_007590 PE=4 SV=1	[more]
B5AJV3_CUCMN	4.5e-87	88.89	Ran-binding protein 1 OS=Cucumis melo var. cantalupensis PE=2 SV=1	[more]
A0A061GXD7_THECC	5.0e-86	81.78	Ran-binding protein 1 b OS=Theobroma cacao GN=TCM_042170 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g07890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07140.1	6.9e-79	72.81	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	1.1e-76	71.22	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	1.0e-74	70.32	RAN binding protein 1	[more]

BLAST of Cp4.1LG20g07890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115038\|ref\|XP_008457356.1\|	1.9e-99	92.17	PREDICTED: ran-binding protein 1 homolog a-like [Cucumis melo]	[more]
gi\|449455021\|ref\|XP_004145252.1\|	4.3e-99	91.71	PREDICTED: ran-binding protein 1 homolog a-like [Cucumis sativus]	[more]
gi\|659115040\|ref\|XP_008457357.1\|	2.3e-92	84.55	PREDICTED: ran-binding protein 1 homolog a-like [Cucumis melo]	[more]
gi\|703123279\|ref\|XP_010102783.1\|	5.0e-87	79.72	Ran-binding protein 1-b-like protein [Morus notabilis]	[more]
gi\|778661748\|ref\|XP_011658664.1\|	6.5e-87	88.89	PREDICTED: LOW QUALITY PROTEIN: ran-binding protein 1 homolog a-like [Cucumis sa...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0046907	intracellular transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf
IPR000156	Ran_bind_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g07890.1	Cp4.1LG20g07890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 score: 4.2
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 score: 3.3
IPR000156	Ran binding domain	PROFILE	PS50196	RANBD1	coord: 25..160 score: 34
IPR011993	PH domain-like	GENE3D	G3DSA:2.30.29.30		coord: 33..160 score: 1.4
IPR011993	PH domain-like	unknown	SSF50729	PH domain-like	coord: 24..161 score: 8.82
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..214 score: 2.2E
None	No IPR available	PANTHER	PTHR23138:SF93	RAN-BINDING PROTEIN 1 HOMOLOG A-RELATED	coord: 1..214 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG20g07890	Watermelon (97103) v1	cpewmB526
Cp4.1LG20g07890	Melon (DHL92) v3.5.1	cpemeB479
Cp4.1LG20g07890	Silver-seed gourd	carcpeB0877
Cp4.1LG20g07890	Cucumber (Gy14) v2	cgybcpeB071
Cp4.1LG20g07890	Cucumber (Gy14) v2	cgybcpeB818
Cp4.1LG20g07890	Melon (DHL92) v3.6.1	cpemedB561
Cp4.1LG20g07890	Silver-seed gourd	carcpeB0737
Cp4.1LG20g07890	Silver-seed gourd	carcpeB0942
Cp4.1LG20g07890	Cucumber (Chinese Long) v3	cpecucB0625
Cp4.1LG20g07890	Wax gourd	cpewgoB0628
Cp4.1LG20g07890	Wax gourd	cpewgoB0650
Cp4.1LG20g07890	Cucurbita pepo (Zucchini)	cpecpeB387
Cp4.1LG20g07890	Cucurbita pepo (Zucchini)	cpecpeB430
Cp4.1LG20g07890	Cucurbita pepo (Zucchini)	cpecpeB444
Cp4.1LG20g07890	Cucumber (Gy14) v1	cgycpeB0376
Cp4.1LG20g07890	Cucumber (Gy14) v1	cgycpeB0405
Cp4.1LG20g07890	Cucurbita maxima (Rimu)	cmacpeB235
Cp4.1LG20g07890	Cucurbita maxima (Rimu)	cmacpeB483
Cp4.1LG20g07890	Cucurbita maxima (Rimu)	cmacpeB636
Cp4.1LG20g07890	Cucurbita maxima (Rimu)	cmacpeB742
Cp4.1LG20g07890	Cucurbita moschata (Rifu)	cmocpeB202
Cp4.1LG20g07890	Cucurbita moschata (Rifu)	cmocpeB441
Cp4.1LG20g07890	Cucurbita moschata (Rifu)	cmocpeB586
Cp4.1LG20g07890	Cucurbita moschata (Rifu)	cmocpeB694
Cp4.1LG20g07890	Cucurbita moschata (Rifu)	cmocpeB695
Cp4.1LG20g07890	Wild cucumber (PI 183967)	cpecpiB507
Cp4.1LG20g07890	Cucumber (Chinese Long) v2	cpecuB507
Cp4.1LG20g07890	Bottle gourd (USVL1VR-Ls)	cpelsiB412
Cp4.1LG20g07890	Bottle gourd (USVL1VR-Ls)	cpelsiB422
Cp4.1LG20g07890	Watermelon (Charleston Gray)	cpewcgB462
Cp4.1LG20g07890	Watermelon (Charleston Gray)	cpewcgB467
Cp4.1LG20g07890	Watermelon (97103) v1	cpewmB507