Cp4.1LG16g03900 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG16g03900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG16 : 5445775 .. 5449659 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTGTGTTTTTTTATTTATTAAAATCGATGTATAATTGGAATAATAATCATAATCATACCAGGCTAAAGCTATTCTTAATCCTTCTGACAAAAGATCACCGGAGCCAGCTTGGTTTCTTATATGGATTGGTCTACCGTTCTGACGCCGGCGAAAGTGTCGGAAAAAGTCATTGAAATCAATCAGACGTTGACGGTGTTGCAGAGGAACATGAGTGACAATGCGGACGCATCGCCGCCGCCGCCGCCGCCGAGTCTTCCATTTCCGGTGAGCCGCTCGTAGTAATCCACGCAGAACAGAGACAGTGAAAGTTGAACTTCGTTCTGAGTCCAAACTCGCCTCATTAGGTCTGAGTAGCCGAGTCGACTCAGCACCGGCCGTATGCTCACCATGTACAGCCGCTTGTACCCTCCCAAGGCGACCACCACCGATTTCACAGACGCCGGAAGCGGCGATGTTACGTGCCGGAAGCAGACCTGTTCCCACACCGATTCACTTCGAGCGATGGTGCACCAGAGCCGACAGACGCAGGTCGCGACGCCGAGCGATGGTCCGTCCAGCCGCTTGAGGATTTCGATAAGAATGTCGAGATTGTCGTTGATCAAGAACTTCCGCCTCTTCTCGTTCGGCTCTGGTATGTGATTCTTCTGCATTGTTACGTTTTAGCCCTAGAATAATCAGGAATTTGGTAGGTGAAACTTGAAACCCTCTGCCTGTTTGATATATATGGAATTGACCCTAGATTGAGAGATAGAAAGAGGGAGAGAGAGAACTCCATCTGGTGGAAATTCATTAACAAGGAGAAAAAGTCTAAGATAGGATTTGTCTTGCTGTGCGTCTCGAACTCCGCGTGTTTGTGAAAATGTCTGTGAGAAGGATTGAGAGAGGGGGTATCGAGGAGGGAGGAGATGGGGCCAAGGAANCGACATCTGCAAGACAAGAACCAAACGGCAGATCAAAATCAAAACCAATGCAAATGAATGCAATGCTGTTCAACTTTCTCTTTCATTGGTTTCATTTTTCAAAAAAAAATTAAAGAAAGAACTGTCTTGTTGCTTAGCTTAGCAGAAGCTCAAGCTGCAGTTGAATTTAGTGTGTGCATATTCCAAGACTTTGGGCATGTGTCCGTTGTGATTTGGGTACCAGTCTTCAAAGGAGGAGTAGCCCTTGAAATTGGAATCACCTGTGCATGGATATGTTACTGTCTCAAAGTCTGTTCTTATGCCTATCTTTTCTTAACTTCAGTGTGTGGAGTGTGGATCATGTCTATACATTGTTCATTGGATCTGTTCCTGAACCACCAATTTCTATATGGTGCCATATCAAATTATGGATTTTTATATCTTAATGATGTCATGACAGATAATATGTGCAATGCATCTTGATTATGATTGTAATTAGTCTTGCAATTATAATAAATTAAAAGATGTCTGAAAAGGTGTTCTTGAAAATAATTGCAAATGAAACAGGAAATATTTGTTGAAATTTTTTATCATGTCACCAAGTTGTAGTTAAAGAGTGCATTTCTCTTAACAATTTGAGAGCTAATTTTCCATTTTAGTTTTCATGTATTAAGTCACTTCAATTTTTTCAATCCTATGTAGTTTGAGAAAAAGTCTTATCATTAAGTAATATATTTGTGTGTTAAATTTAAATTTGTGACATGTTATTAACTATATGATCCTTAATTGTCACATAATTCTCTCTAAATCACTTCAATTAGTTTAATCATCCATTTTTCTTCCCCATGATTTAGGGAAGGCTTATCCATCGTAATCCATAATCTCACATCCCTCTAGAAGAGAGTCACTGTTTTATTGATGCAGATTTTAAGTAGATGGCATGTTAGACTTAAGGCTGTGCTCACTTTCGTTCCTTAGTCATATCACTCTCTGTTCCTCTCTAGAACAGAGAGATTTAATGATTTTCAACTTTTCACACACAGGGATAGGCAGGCCAGAGACACACACCCGGGGGGCAGGGGTGGAACTTTTAGACTATGAAAAACGTGTTGACAATGATCATAGAGGTATGTTATGCATTGTTTTCGCTTGTGAGATATCTATAGGTTAGCACTAAACTTGTGAATCCTGTTAGATGGGTCATTTCTATTACAAAGCGTACAGTATTTTCAAATGGGTATCATTTTAAACAGTGATATATACTCATCATACTCGGGAAATGGATGCTGGAAAACTAAAAACAAAATAGACAGAACTTTATGCATTTAGGGGGAAAAGGTGAAGCAGAAGACGATAAATGCATTAAAAAATATTTGAAAATTAGAAGGATGTTTGTGAGCAGGAAGAAAAGTCAGAGGGAAACAAGCATCATAGGTTTCCTCAGAAAAATAATAAAGAAATAACATGAACAGGGCAGTGTCCATTTGATTGTCTGATGGGGGGTTGGCACAAAAAGGTAACCCTAAGTCCTTTTGAGACAGAAAGCATAGAATAAAACATCATTATATAAGGGAGCTGTATTTGACATTTAGATTTATAAAAACACCCTTTANCCCCCCCCCTCTCCATATTATATTCTTTTAGGGTTTCTGAAGGCCTTGTTTTGTTTCATGTTGGACTTGTCTATTGGACACATCTGAGAAGGCACTGTTCCCAAGTCTTGCTGTGAAGAACTTAATAATTACAACAATACAACAAGAAACCCCTAAAGGCCAATAACCAACACAAATTCATACGTTTTCCCTATTCTCGCTTGCTTATCCTTCTTCCCTGTGTAAAAAAGACTGCTCTTTGTTGTTGTAGAGTTCTTGTCATCATCATCTTGTAATTTTTCCTCTCTTGCAGCTCAATATTTCAACCCCATTTTGCTGTAAATCTTCTCTCTTTTTTGGGGTTTCATAGATTCAGAACTACAACTTCTTTAATGGAATTTGTACTGCCTCTTGCTGCTCTGCACAGGATTTTGTTAACTCTGGGTCTGATTACATTTACATTCGTTTCATATCTTTGTTTTACACTCCATGGTCCCAGAAATGCTTTGAAATGAGTTTTCATGTCAAATATTATGTGCACGTGATTTAGTTTTGTATGTTGATATTTGTTTTTATACGCTTTTCATTTTGAATATATTTATGACTATAAGTACTGTAGATTCTGGATCCTTTTGCTCATAAGTTTCAAAACCCTACTAGATTTTAACCACAAAATTCTGCTGTTTTACTAGGTCAATACAAACAAGGTTAACGGTGAACTATACTGAGATTCTACATCGGTTGAAGAGGTGAACGACATTCTTTATAAGGGTATGTAAATCTCTCTCACGACCAAAGTGTTACTCTATGATAGGTACTTGTTTTTATCTTTAAAAATTAACTAAATCATTCCTAGTCGGGTGATGATTACAGAATTGAACTAGGATTCAACACAATTTGTGTCTAATAGATTATAAAATTATAAAAATTTTATTTCAGGGGTTTCAAATACTTGGGCCATCCATGGGCTCTACAAAGTAAACATAAATTTGGGCTGGATCCTATGCTAATGGGCCTCCAATCAAGGCCCAAACTCCAAGGTACGGATGTTTTATTTTATCTTGCCGTAAGAGAATCGCATCTTAATCATTAAAAAATTAAAAAATTAAAAAATTAAAAGGCAAGACATAATGATATTTTTTATCAAACATTTTTTTTAATTAAAAAGTATTTAAATCCGTCGAAAGTAATTAATATTATGACTACTTCAAATTAATTACTGAATTTAACAAGAGAAAACAACAACAAATTCCTACTCGAAATCAAATCAAACAATAAAAGAAATATTTAGAATTCTTTTTTTAAATTAAATTAAGATAAAAATAAAAAATTAGAACAAATATACATAATTTATAAAAAGAATATTAATTGGGTTTATAGAGGAAAAT

mRNA sequence

ATGGCCAGCTTGGTTTCTTATATGGATTGGTCTACCGTTCTGACGCCGGCGAAAGTGTCGGAAAAAGTCATTGAAATCAATCAGACGTTGACGGTGTTGCAGAGGAACATGAGTGACAATGCGGACGCATCGCCGCCGCCGCCGCCGCCGAGTCTTCCATTTCCGCCGAGTCGACTCAGCACCGGCCGTATGCTCACCATGTACAGCCGCTTGTACCCTCCCAAGGCGACCACCACCGATTTCACAGACGCCGGAAGCGGCGATGTTACGTGCCGGAAGCAGACCTGTTCCCACACCGATTCACTTCGAGCGATGGTGCACCAGAGCCGACAGACGCAGGTCGCGACGCCGAGCGATGGTCCGTCCAGCCGCTTGAGGATTTCGATAAGAATGTCGAGATTGTCGTTGATCAAGAACTTCCGCCTCTTCTCGTTCGGCTCTGGGATAGGCAGGCCAGAGACACACACCCGGGGGGCAGGGGTGGAACTTTTAGACTATGAAAAACGTGTTGACAATGATCATAGAGGGGTTTCAAATACTTGGGCCATCCATGGGCTCTACAAAGTAAACATAAATTTGGGCTGGATCCTATGCTAATGGGCCTCCAATCAAGGCCCAAACTCCAAGGTACGGATGTTTTATTTTATCTTGCCGTAAGAGAATCGCATCTTAATCATTAAAAAATTAAAAAATTAAAAAATTAAAAGGCAAGACATAATGATATTTTTTATCAAACATTTTTTTTAATTAAAAAGTATTTAAATCCGTCGAAAGTAATTAATATTATGACTACTTCAAATTAATTACTGAATTTAACAAGAGAAAACAACAACAAATTCCTACTCGAAATCAAATCAAACAATAAAAGAAATATTTAGAATTCTTTTTTTAAATTAAATTAAGATAAAAATAAAAAATTAGAACAAATATACATAATTTATAAAAAGAATATTAATTGGGTTTATAGAGGAAAAT

Coding sequence (CDS)

ATGGCCAGCTTGGTTTCTTATATGGATTGGTCTACCGTTCTGACGCCGGCGAAAGTGTCGGAAAAAGTCATTGAAATCAATCAGACGTTGACGGTGTTGCAGAGGAACATGAGTGACAATGCGGACGCATCGCCGCCGCCGCCGCCGCCGAGTCTTCCATTTCCGCCGAGTCGACTCAGCACCGGCCGTATGCTCACCATGTACAGCCGCTTGTACCCTCCCAAGGCGACCACCACCGATTTCACAGACGCCGGAAGCGGCGATGTTACGTGCCGGAAGCAGACCTGTTCCCACACCGATTCACTTCGAGCGATGGTGCACCAGAGCCGACAGACGCAGGTCGCGACGCCGAGCGATGGTCCGTCCAGCCGCTTGAGGATTTCGATAAGAATGTCGAGATTGTCGTTGATCAAGAACTTCCGCCTCTTCTCGTTCGGCTCTGGGATAGGCAGGCCAGAGACACACACCCGGGGGGCAGGGGTGGAACTTTTAGACTATGAAAAACGTGTTGACAATGATCATAGAGGGGTTTCAAATACTTGGGCCATCCATGGGCTCTACAAAGTAAACATAAATTTGGGCTGGATCCTATGCTAA

Protein sequence

MASLVSYMDWSTVLTPAKVSEKVIEINQTLTVLQRNMSDNADASPPPPPPSLPFPPSRLSTGRMLTMYSRLYPPKATTTDFTDAGSGDVTCRKQTCSHTDSLRAMVHQSRQTQVATPSDGPSSRLRISIRMSRLSLIKNFRLFSFGSGIGRPETHTRGAGVELLDYEKRVDNDHRGVSNTWAIHGLYKVNINLGWILC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g03900.1Cp4.1LG16g03900.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g03900CmaCh02G002280Cucurbita maxima (Rimu)cmacpeB628
Cp4.1LG16g03900ClCG02G009310Watermelon (Charleston Gray)cpewcgB258
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g03900Cucumber (Gy14) v1cgycpeB0289
Cp4.1LG16g03900Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG16g03900Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG16g03900Cucurbita pepo (Zucchini)cpecpeB311
Cp4.1LG16g03900Cucumber (Gy14) v1cgycpeB0027
Cp4.1LG16g03900Cucumber (Gy14) v1cgycpeB0207
Cp4.1LG16g03900Cucurbita maxima (Rimu)cmacpeB123
Cp4.1LG16g03900Cucurbita maxima (Rimu)cmacpeB525
Cp4.1LG16g03900Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g03900Cucurbita moschata (Rifu)cmocpeB483
Cp4.1LG16g03900Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g03900Cucurbita moschata (Rifu)cmocpeB577
Cp4.1LG16g03900Wild cucumber (PI 183967)cpecpiB277
Cp4.1LG16g03900Wild cucumber (PI 183967)cpecpiB294
Cp4.1LG16g03900Wild cucumber (PI 183967)cpecpiB301
Cp4.1LG16g03900Cucumber (Chinese Long) v2cpecuB274
Cp4.1LG16g03900Cucumber (Chinese Long) v2cpecuB292
Cp4.1LG16g03900Cucumber (Chinese Long) v2cpecuB298
Cp4.1LG16g03900Bottle gourd (USVL1VR-Ls)cpelsiB221
Cp4.1LG16g03900Bottle gourd (USVL1VR-Ls)cpelsiB232
Cp4.1LG16g03900Bottle gourd (USVL1VR-Ls)cpelsiB245
Cp4.1LG16g03900Watermelon (Charleston Gray)cpewcgB249
Cp4.1LG16g03900Watermelon (Charleston Gray)cpewcgB267
Cp4.1LG16g03900Watermelon (97103) v1cpewmB278
Cp4.1LG16g03900Watermelon (97103) v1cpewmB297
Cp4.1LG16g03900Watermelon (97103) v1cpewmB305
Cp4.1LG16g03900Melon (DHL92) v3.5.1cpemeB257
Cp4.1LG16g03900Melon (DHL92) v3.5.1cpemeB273
Cp4.1LG16g03900Melon (DHL92) v3.5.1cpemeB279
Cp4.1LG16g03900Cucumber (Gy14) v2cgybcpeB345
Cp4.1LG16g03900Cucumber (Gy14) v2cgybcpeB769
Cp4.1LG16g03900Cucumber (Gy14) v2cgybcpeB919
Cp4.1LG16g03900Melon (DHL92) v3.6.1cpemedB302
Cp4.1LG16g03900Melon (DHL92) v3.6.1cpemedB317
Cp4.1LG16g03900Silver-seed gourdcarcpeB0282
Cp4.1LG16g03900Silver-seed gourdcarcpeB0485
Cp4.1LG16g03900Silver-seed gourdcarcpeB1133
Cp4.1LG16g03900Silver-seed gourdcarcpeB1482
Cp4.1LG16g03900Cucumber (Chinese Long) v3cpecucB0361
Cp4.1LG16g03900Cucumber (Chinese Long) v3cpecucB0342
Cp4.1LG16g03900Cucumber (Chinese Long) v3cpecucB0367
Cp4.1LG16g03900Wax gourdcpewgoB0346
Cp4.1LG16g03900Wax gourdcpewgoB0349
Cp4.1LG16g03900Wax gourdcpewgoB0355