Cp4.1LG16g01720 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG16g01720
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG16 : 3724420 .. 3730256 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGAAGCAACTTTAAGCAGTGTTTAGATTATGTAGACTGCTTGTACTATAGGAGAAACTATAAGGTTAGTATGGCTTCAATCTCTCAGTCATTGCTGGGCAAGTCTTTTTCACCATTAGATATGATCTGAAAATTCTTTTTTCATCAATATGTACTGAATTTTGTCTTTTTTATGTGAATTACTATCTTATCATGAATTAATCTCAATCTCTAGCTTTGCTGGTAAAATTCTATGATGTCTTCTTCTATCACCATCTGCGTTTTTAATAGGTACAGATAAATTACTGAAAGGTGATTCATGATGAAGATCTTTATTCTAAATTTATTGATTCCTTATTAGTTTTTGGTTCATGTCTCAATAACAATACTTGATAATTATATGGTTAAATATGGAATTGGATCTGACATGTGAATAGTGAACATGTTTTAAATAGAAACATAGGTTATTAGATTAGAGGCTAAAGATGGAGTTCAATAGGCGGTCATAAAGTGAATTTAATTAGAGTTGAGATTAAAAGTAGCTTTTCCTGATTCAAGAAGCACTATAGATGCTGATATCCAAAACGAGCACTATGTTCTTCCTAAAAACTTATGAACCTAATGCTTTGTTCTTTGCTGGAGAGGTATAGGAATGCAAGAGGTTACTTTCTGGAACTGGCTAGGAATAGCAACAATTGTTATAAGGTGTATGCAACTGGGGTGATTGCAGGGGGGTGCAAGCTCTGGTTTCATGAAGAACAGTAGAATGATTGAATACAGTTTTGAATTTGTCTTCTGTCCCTTATATGGTGTTCTGATGCAGGAGAAAAGACATCTCAAAATTAGAGACAGAAGTAGGGAATGTTTTTTTTTTGGGGGGGGAGTGTGCACTTCCACTTTAGAATTCCCAGAGAAGTTGTCAATATACTGATAGATGCATGAGAAAAATTATCTGGGAATGAGCCGATGGAAGGGATGATAACCATATCAAATAGATTGGTGTGTCAAATCGTGAGACTTTTTTTGTTTTAGATGCTTGCTATTTATTTTGTTTAACATTTAACTTTATTTTGTTGTCTGAACTGGAGAATGTTGTACTAAAAATTATAATTCTGAACTTTGTTTAAAATGAGTCTTGCAATTGGCATCAAGCTTTGTTTAGCATTGACATGTGTATTATGTTAACATGTTTCTTAGCCATCCCTGTCTTAACGTCTTTTTGCGTTCCTTCTTTCTTTCTTCTGAGATATATTGTTCTGAATCTTTGCTTCTTAGTGTGCGCAATTGTTGCAAAAATTCAAATAATATCAGACATAAAAGAAAAATGTAATGGAAATTGAAGTTTCCTAGCATTATATACATTTTATTTGTGTAGATGCTTCAATTAATAACTTGATTAGATGCTTTCTGAACTCAAATCTCTGGCTTCTTGTCATCTTGTGCCTTTATTTACAGAAAATCTATTTTGATTTATATTGGTTCATTATCCTTGTATCCTTCCTATTGAATACTTCTTCTCTGGATGATCATGGTTACAAACTTGATATATTATATATAGAAACCGCATTGAGTTTGAGAAAGTTACAGGTACTGTGTTATATAGGCTGATTAACTGGAGGTCACTTTTAACTACTGGGTGGATGGCAAATAATATTAAGTTTGTTAGTTAGCACTTCGTCAGCAACGTCGGTAGGAAATTTTGGGAAATCCCGATATTTGGGTAGATATCGAGTATTGTAGGGTTAATGAGTAGTAAGCTACCTACCTTTGTTCTTAGAAAATGGTAGCAAGGTAGTAAGATATTGAGTATTGTAACATTACTTCTGTAATGTTGGGAAACTGGTAGCAAAGTATTCCCTTGTGGATTCATTGTGTGCTGCTCAGAAAATTTGATGATCGAAGTTTTTCTAGTAGTGTTTGGAGGATACTTTTACAATAGATTGTGCAGGATGATGACACCACTAAGACAACATGGCTCAAAATCAAATTTCGCAAAAAAATTATTCACATTTAGTAGATGGCAACATCAATCAAGAGCAAAATCTCTTTCTGTATATATACACAATAGACAATGGATGGTCTCTATTGTAATTATATGTTCTTAACAAATTAATGTTTAAGCAACATGGCTTCCATCTTCCTTGTCTTGGCTGCCTTCTTTAGTTTCTCCAACGCCACTAGTCCAATTTGTCTTACTCTTTCTCTGGACAACCCTATGCTGAAAAACTCAGACCACAAAGTGCATTTTCTCAGCTAACTTAGAACATCATCGACATTTTGCTCGATTAAGTTTCTTTGGCTTACCGTTTGCTTATTTCCTCCCATGTCAGACACTCGTTATCCAGACCGTGGTAAAGGCGTATGATCTCTCTTTCTCGGTCCCCAAGTGTCGTAGTTATGAGTTTGTTAACCTCAGCCTGCCAATATTTTTCAGTGTATAAGCAAACAACTCATCATTCTTCACCTTATATTGCTGAAAATAGTATAGTTTTTCACTCTTTTAAGTCTATTTTCTTGGTTTTGTGGTCGATTATTTTACCTTCAGAATCCATATGTCTGTTCCATGCCATGGGTTGTTCTCGAGGCAGTTATCTGCAATATACTGCAAAAACAAAGGAATTCAAGCAATGCCAAACATTTAGACCAAAATTCTGAAAAACATGTTATGTTTGAAGAAACAGAGTTTCTATTCAAGTCTTACACTATGATGAGTTTCGCCTGGAAGACCATTTAATGAAGGAAATGCCTCTCGGTCTAGCGAGAACACCTTGCTTATTGCCTAAAAGAGATGATTGGTTGGCTTAATAAGGAAAATGAAAACAGAGATTCATTAGGATAAAGCACAGTGAATGGGTTATTAGAAATTTGTAGTACCTCTGTGGCGTTCTTGACTTTCTTTTTGGACATGTTTAGGGATTCTGCAATCCTCTGAGACAAATAGACAAGTGTTAAGGAAATCCCAAACTTCACAAAGTTCATGTAGGTTAGTATAGGTATCTCTGTTTTATTTTTACTCGGGTCTATTTTCATTTTTCCCTTTTGTTTCAAAGACTTTATTAAACATGCAAGTCCAATGTTCTATAAATACGTTTCAAATGATTATTTCCGCACTAACGGTGACATTATGTATATGGTAGCGACTTTAGGTTAGTAAAAAAACCTAGGGTCGTTACAGTTGGTATCAGAGTTAGTCACTAGATGGTGTACTAACGAGGATGCTGAGCCCCGAAGGGGGGTGGACACCGAGCGGTGTGCCAGTGAGGGCGCTGGGCACCAAAGGGGGTTGTGAGATCCCTTGAAGTGGGGAAAGAGCACCAGTGAGGACGCTGGGTCCTAAAGGGGGGGCGGATTGTGAGATCCCACATCGGTTGGGGAGGAGTGAAACATTATTTATAAGGGTGTGGAAATTTCTCCCTAGTAGACGCATTTTAAAAACTTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATCGGTTAGCGGTGAGCTTGAGCTGTTACCGTTCATCTTAGTCTAAGTTTGCAGTCTTTAATGTCAGTAAGCAGTGTTTTGCAATATTTTGCTGCAGTGTTATAACAGTTATCCACTTACATCAATTGATGGAGTGATTCCTTTCTCTTGCAGTCTAACTTTAGCGTTGCGAATCAATCCTAATCTTTCATGCATATGAGTCGGCAATCTTAGCATTCTTGAATTCTCAACTAATGCTCTTGAAACACCCTGCACATGGATGTAGACATTCAACTGCTGTCAGTGCGTGCTATAACATGGTATGCATTCTCCAAGTTAAGATGCTTACATTAACTGATTTAATATCTCTCCTTTTATTCTTGGCAAATCAACATGTTTGATCTCCAAGTGTTCATGATACAGAAGTGTAATTGTTTTCTCACCTGGCGTATCCACCAATAAACATAGGTTGAGATTTTAAACCCCTTTGAAGAATCAAACTTCTCTATCCCACGGAGAAGTCCAATTAAGCCACCCTACATTAGACATGAACAAACTCTTCAATTACAGGGAAGCTAATAGGTTTAGAGTTAGCTGTAGGGGGCTGTCATAAGCTCTTCACCTGAACTAAGTCATCCATTTCAGCCCCCATTTTGTCGTATCTTTGCGCAATAGACATAACCAAACGAACATTGCTCATTGCTAGCTTCTCTCTTGCTAATGAACATTCCATTACACTTGACCGTAATTTGGCACGAGAAATCTTGAGTGATATTGCTAGTTGGTCTTCGGAGGGCTCACATCCTAATCTTTCCTTTAGTCTGAGTTTCATTACAGAGGTTAGGGAGAACAAAATGTGAAGTTCATGATATCATTATTAGAGCAATCAGTTTTGACAATGGAGTAACAGAAGCATATAAACATATGATGGGTTTCTTTTTCACAGTTCAGTTCGGATAAGACTAATCATGGGAAGAAAACGGCCGGAAAAGAGTCAGTGTTGAATGATTTTATCCACACTGAGGCCCATCCAAGTAGGAATAATACTATCTACTACTATTACTCAATTGTATACGTAAAGATTGTGAGATCCCACATTGGTTGGAGCGGGGAACAAAGTATTCCTTACAAGGGTGTGGAAACTTCTCCTTAGTAGACACGTTTGAAAACGGTGAGGATGACGGGGATGTGTAATGGGCCAAAATGGACTATCTACTAGCGGTGAGCTTTGGTTGTTACCAATGATATCAGAGCTAGACACCGGGCGGTGTGCCAGTGAGGACATTAGGCTCCGAAGGAGGGTGGATTTGTGAGATCTCACATCGATTGGAGAGAGGAACGAGTGCTGGCAAGAACGTTGGGCCTTGAAGGGGGTGGATTGTGAAATCCCACATCGATTGGAGAGGGGAACGAGAGCCAGCGAGGACGCTGGGCCCCAAAGGGGGTTGGATTGTGAGATTTCACCTCGGTTGGAGAGGGGAACGAAGCACTCTTTACAAGGTGTGAAAACTTCTCTCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAAAGGAAAGGCCAAAGAGGACAATATTTGCTAGCCGTGGCTTGGGCAGTTATAAAGCTTGAAGTAATCTATAAAAATCTGAATAAGAAGAATGTGCTGACCTGGTTTTACGCTCCTCCAATGCAAGACCGACTTTGATTTTCTTCGAAAGGCGTACAACTTCAGCATGAGAAAGTAACTCTTCACTTAATAAACCTCTCACATACCCCTTTAATCGATTTTGTAATAGCTCAGAATTGATTGTAGGCCTTAACTGTTTGCTGATTCTTGGCTGAGCCATAAGAACATGTTTGCTCTGTATTTTCCTCCTAGAACTCATTCTCCTTTGTCGTGCAGACACACCAGAACAAGTGACAGGTACTTTCTTCTGTGTTTTTCCTCTCGGCGCATCGGCCAACACGGTTTGATCGAAAGATAGATTCCATTGCTTCTCCAGCATAGACTTTTGCAGCAAAAGAAGAGCCTCCACAGTACATTTCAGATCAGTTTCTTCATCTTCCCAGATCGTGCTATTATGAAGCCTTGGTTCAGCAGTTGGAGAAGAGGGTGTATCTACATGTTCCTTCACAGCTTTGATGCAATGCCCGTGCCGTTTCGACGACGACTGATTTCTCGGAGAAAAGTTAGGCGAACTTCTTGCTGTTATTACCACACTCTTTGTAGGGGAAACCTGGGTTTGTCCAATCCTGTGGTCATTGACATACAAAAGCTTTTCTGTGAAATCAGAATAATAGGACGAAGAATTGAACAGCCTCTTGGCTGCACCAAGCCCAGTTATTGCAGTTGTTGTTGCCATCATAATATCATATGGCTTCTCTTCTTCTTGTGCACAAAACTCTTAA

mRNA sequence

ATGTTAAACCGCATTGAGTTTGAGAAAGTTACAGACACACCAGAACAAGTGACAGGTACTTTCTTCTGTGTTTTTCCTCTCGGCGCATCGGCCAACACGACTTTTGCAGCAAAAGAAGAGCCTCCACAGTACATTTCAGATCAGTTTCTTCATCTTCCCAGATCGTGCTATTATGAAGCCTTGGTTCAGCAGTTGGAGAAGAGGGACGAAGAATTGAACAGCCTCTTGGCTGCACCAAGCCCAGTTATTGCAGTTGTTGTTGCCATCATAATATCATATGGCTTCTCTTCTTCTTGTGCACAAAACTCTTAA

Coding sequence (CDS)

ATGTTAAACCGCATTGAGTTTGAGAAAGTTACAGACACACCAGAACAAGTGACAGGTACTTTCTTCTGTGTTTTTCCTCTCGGCGCATCGGCCAACACGACTTTTGCAGCAAAAGAAGAGCCTCCACAGTACATTTCAGATCAGTTTCTTCATCTTCCCAGATCGTGCTATTATGAAGCCTTGGTTCAGCAGTTGGAGAAGAGGGACGAAGAATTGAACAGCCTCTTGGCTGCACCAAGCCCAGTTATTGCAGTTGTTGTTGCCATCATAATATCATATGGCTTCTCTTCTTCTTGTGCACAAAACTCTTAA

Protein sequence

MLNRIEFEKVTDTPEQVTGTFFCVFPLGASANTTFAAKEEPPQYISDQFLHLPRSCYYEALVQQLEKRDEELNSLLAAPSPVIAVVVAIIISYGFSSSCAQNS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g01720.1Cp4.1LG16g01720.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 58..78
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None