Cp4.1LG16g01680 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g01680
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGrowth-regulating factor
LocationCp4.1LG16 : 3771041 .. 3775523 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGATGGGCGTGGGTATGCACTCTATAAACATGGATGGATGACATGATAGATGAAATATGTTTATAGGATAGAAAATAATGAAAAAGAAAAAGGAAGGAGGAGGAGGAGGCAGCATTGGAGTCCAATGAATGGTGAAAAGAAACAGTGTGGGGCTGAAATAGAGGCATGAAAAACACAGCGAAGGCATGATTGGGAGCTCTTTCCTTACCCCTAAACAGCCCATATCCCAACAAAAACAAAACAATGAAATGGGTGTGTTTTAAGGGAAAAGGCCTTTGATTAATTAACCAAACACACATCAGAATCAAGATCAGCCAAAAGCAAAAAGAGGTAATCTTTTGAAGCCGAATCCCCCAATACCCAATACCCAAATTCCCAAATTCCCAAATCCCAAACACACAAAAATAAAAATGAGACCAAACTTGGCCTCCTTCGGTTCCTCCACACATACAGATACTGCCCCCCCTTTACCCACACAAACCTTCGGACACTAAAAACAAACACTACAGAGAGTGACAGAGAGAGCAATCCAGATGGTGGACACACAGGCTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGACTATGTTTGAGGTTTTCTGGGTGTTTTAGCAAAAGGGGTTTTGGTGGGTTTTGTGGATTAGTCGCTACACAACTGGTGGTCGGCGGCGGAGGTGGAGGCAGAGGCGGAGGAGGAACTCTCGTGTTATTATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCAGTAATCTTACCTCAACCCTCTCCTTTTTTTTTTATTTTTTATCTCATTTTCTCTCTCTCTTTCTGGGCTCTGTCAGTTTGATTGGTTTCTGTTTGTGTTTGATTTGATTTTGGTGATCTTGTTCATTTCTTGTTTCCCCCTTTCTTTTTCTTCATCTCATTTTTTATGTACAGTTCTTTTCCTCTAATGGGTTCATTTTGATTCATGAATGGTGCTTTTTTTTTAAGTTCCCTTGCTTCAAACACTTAACAATCTTGTATTTCCACTCCCCTTATGTCTATAAGTTCTGAATCTGCAAGTTATATAAGAAATAATGGTGTTTTTCAGCTGAATGAATGAGGGGTTTGGTGTCTAATAACCCTTCATTAGTTTCAATCTTTGTACTGTAATAAATCCCCCAATCTAAAGCCTTAGCTTCATCATTTTGGGTATGTAAAGCCAAGAATATGTTTGAGCTATCTTCGTGTTAGTTCATGTTTTGATATGTGCGAGATTTGTGCAGTGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCGTATAAATCCTCCCTGCAACTTCGTTTTGTCGAATCATATCGCAACGCAAGAACTTATGAACATTCATATCCAATTGCCATGATGTTTGATATCAAATGGGAGGAGTTTCCATGCATTTATTTGCAAGAAAGGAAAAGTTTGCACTCTTGGGGACCATATTCAAGCTATGTGGTGGGAGCCCAAACTGTTCTCTTCTCTGCCATATGTTTTATTGAATGTTTTAAACACACCTTTTTGAATTCTTTTGGATCCAACTCTTTGGGCCCTATTCATTTCTTTTGTTCATAATTTTTTTTGTGTTATCCTAAGTATACATGCTTCACTGATCCTATGATGTCTTGCTTTTATGTTCTTTCCAATTGATGCCGGCCTGACATAGCCATAAAAAATTGTCTTGCTGTTAAAACAATTGTACTAACCCTATTGGTTATATACCTTAGCTCAATATCAAAAGATATCAAGACAGAGAAAGAAATGTCAGTTCTGCTCCAATTCTAGTGGTCTGTAAAGTTGAATTGTCTCTCTTTTTCTCTCTCTCTCTCTCTCTCTCTTTGGCTTTTCTTAGCTCATCTTTTTTACCCTTCAAATTGTCTGTGTCTATGGTAATGTTCCATATTTCGCTGACATTCTGCGATCGATGTTTGCTGAAGAGTAACCGTTCTGATGGTCGTTGGCGTTCACTTTTGTTAACTTTAACTGATAAACTTTTGCGTGATCTGGTTTGTTCTAGGTCGATTCTTGTGAATTTAGGTACGAGTTAGAAAATTCTCGTCGTTATTTGTTTTTTTTTTTCATGGTCCAACATATCGGGTCCTAATGTCGGCGGATGGCTGCCGAGTTCAGTTTTGTTGTTCATAGGGAACAACTCTGACAATCATTATGTTCTTTTGAACTCTTGCTATTTAGCTTTAATTGTTCCTAGCTGCCTCAGTTATTGTGTGAGCTGACTGAACTTATGGAGCTTAATGGGTAAACCATGCTTAAGCTTTCAATCTGTCATCGGTTTGTACCTCGGGGTTTGTACCGGTATTAGGTGGTTTGCTCTCTTCTTTTTCGCATCATAGCGAACATTTTAACTTGCTTATTGTCCTTCACCAAAGCGGCTTAAGCGTCTAGCTTTTGGCTCGACTTTGTGATCGATCTCTTCACGTCTTGAAAGAAGGCCTTTGGACATGTTTTATTTTTCGCTCTTGTCGCACGTTGCTTTACTGGAGCTATGTGAGGAAAAAGTGCCATGTTTTTTTAACTATTTTGATTGTTCTTTCATATACTTATGGACTCCTTAGTTCTGCTATAGATTTGAATCTATCTATTCCATAATTGATATTCTTTGTACTTGCAATATCCTTGATCATAGTCACAAGAAACCTGAATTTTAATAGCTTTGATCCTCCTTTGATGTCTCATCTGTCTGCTAATTTTATTTCTGCTGCTAACACGGTCTCCTTTCGAGCTACTTTCCTTCGACCTTTTCTTTTTCTGGGTCAAGTTCTGATAATCTTGGTCACGCATTGTGATATCCCACATCGGTTAAGGGTGTGGAAACCTTTCCCTAGCAAACGTGTCTTAAAAACTTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGNGGGGGGGGGGGGGGGGGGGGGGACCTTGTTGGACCTTTCTGGTTAAAGAATCTATGGAACGTGACAGAAGCGCACAGGCTTACAGCCTAAAATATCTCATACTGTCATGGTTCATAGACGGAAATCGAGTAACAGAGAGCCACTTTGATGTCTGGTCGTGTCCGAACCATTGTAGTATACGATTCTCATTTTGTTACTAGTGACAATGGTTGAATTAACATTGAAGCATGTGCATTGGAGGTTAAATTTGCAGTGAAGTTGAGCATATAGATGCAAATTCTCTTCCCTTATTTATGTATTAATTGGATTACAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAGTACCTGCTTCTACCACGCCTGTTCGGTTTCTTCATGCATATTCTTAGTTCATCCTCAATATCATTCTCCATATATGATTGAAAGCAGCATGATGCTTTGAGAAAATTTTCAAGTTTTATCTCTCAACTTCAATGCCTGAATTTTGAATGCTAGTCGTTTACGTTCGGTATATGTGAGCGAACGTGTCGTTGGAGAATTCTGTTGTATTCTTGTCTTGTTTTCCCTTTGCAGCTCTGTTTTTCGGGGTATCGAAAACTTGGTTATGTGTAAACAATTTGGAAGCTGAATGTTGTTATTAGGCTTGGAATAATACAAAACTATGGCTTGAA

mRNA sequence

TTGATGGGCGTGGGTATGCACTCTATAAACATGGATGGATGACATGATAGATGAAATATGTTTATAGGATAGAAAATAATGAAAAAGAAAAAGGAAGGAGGAGGAGGAGGCAGCATTGGAGTCCAATGAATGGTGAAAAGAAACAGTGTGGGGCTGAAATAGAGGCATGAAAAACACAGCGAAGGCATGATTGGGAGCTCTTTCCTTACCCCTAAACAGCCCATATCCCAACAAAAACAAAACAATGAAATGGGTGTGTTTTAAGGGAAAAGGCCTTTGATTAATTAACCAAACACACATCAGAATCAAGATCAGCCAAAAGCAAAAAGAGGTAATCTTTTGAAGCCGAATCCCCCAATACCCAATACCCAAATTCCCAAATTCCCAAATCCCAAACACACAAAAATAAAAATGAGACCAAACTTGGCCTCCTTCGGTTCCTCCACACATACAGATACTGCCCCCCCTTTACCCACACAAACCTTCGGACACTAAAAACAAACACTACAGAGAGTGACAGAGAGAGCAATCCAGATGGTGGACACACAGGCTGATCTATGTCCCATGATTTTCTTCTCTGTCTCAGACTATGTTTGAGGTTTTCTGGGTGTTTTAGCAAAAGGGGTTTTGGTGGGTTTTGTGGATTAGTCGCTACACAACTGGTGGTCGGCGGCGGAGGTGGAGGCAGAGGCGGAGGAGGAACTCTCGTGTTATTATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAGTACCTGCTTCTACCACGCCTGTTCGGTTTCTTCATGCATATTCTTAGTTCATCCTCAATATCATTCTCCATATATGATTGAAAGCAGCATGATGCTTTGAGAAAATTTTCAAGTTTTATCTCTCAACTTCAATGCCTGAATTTTGAATGCTAGTCGTTTACGTTCGGTATATGTGAGCGAACGTGTCGTTGGAGAATTCTGTTGTATTCTTGTCTTGTTTTCCCTTTGCAGCTCTGTTTTTCGGGGTATCGAAAACTTGGTTATGTGTAAACAATTTGGAAGCTGAATGTTGTTATTAGGCTTGGAATAATACAAAACTATGGCTTGAA

Coding sequence (CDS)

ATGAACAACAGTGGCGGTGGCGGTGAGGATGGGAGTAGGACAGTAGCAGCAACAGCAAGTGGAATGATGGGGATGAATAGGTCACCTTTCACAGTGTTACAGTGGCAGGAGCTGGAGCATCAGGCTCTGATCTTCAAGTATATGATGGCAGGTCTGCCTGTTCCACCGGATCTTGTACTCCCTATTCAGAGGAGTTTCGAGTCCATTTCTCATAGGTTCTTCCATCATCCCACCATGGCTTATTGTTCATTCTATGGGAAGAAGGTGGACCCAGAGCCTGGAAGATGCAGGAGAACTGATGGAAAGAAATGGAGATGCTCCAAAGATGCATATCCAAACTCCAAATACTGTGAGCGCCATATGCACCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAATCTCAAACAATGACACAATCGTCGTCCACTGCGACATCTCTTACCGCTACTGGAAGCAGTAGCACCGGAGCTGGAAGCTTCCATGGTCTTCCATTGAATGCCTTAAGCAACTCCGAGGCGACTACAACTAGAACCAGCCAGCCTGATTATCCTTTGGACTCCATTCCATATGGAATACCAAGCAAAGATTATAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGTTCAAATGGATGCACCAATGGACAACACATGGCCAATAATGCCATCTCGATCACCGTCTTTCCCGGCATCAAAATCGACTGAAAACTCCATCTTCCAAAGTGGATATCTGCAGCATTCGTTCTTCGGTGGCGAATATCCATCTGGGGAAACTCTGAAACAAGAAGCTCAATCGCTTCAACCGCTCTTCGACGAATGGCCGAGAACTAGGGAGTCATGGACTGGACTCGACGAAAGATCCAATCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGTCTTCATCCGACTTGTCGACCACAAGCTCGAAATCTCCTCATGGTTAG

Protein sequence

MNNSGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGLDERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPHG
Homology
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BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF3_ORYSJ (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica GN=GRF3 PE=3 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 6.7e-67
Identity = 153/358 (42.74%), Postives = 212/358 (59.22%), Query Frame = 1 

Query: 11  GSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESIS 70
           G+R  AA A         PFT  Q++ELE QALI+KY++AG+PVP DL+LPI+R  +S++
Sbjct: 41  GARWAAAVA------RPPPFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRRGLDSLA 100

Query: 71  HRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRK 130
            RF+HHP + Y S++GKK+DPEPGRCRRTDGKKWRCSK+A P+SKYCERHMHRGRNRSRK
Sbjct: 101 SRFYHHPVLGYGSYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRK 160

Query: 131 PVESQTMTQSSSTATSLTATGSSST----------------------GAGSFHGLPLNAL 190
           PVE+Q +   S    +  A   +ST                      G G     P +  
Sbjct: 161 PVEAQLVAPHSQPPATAPAAAVTSTAFQNHSLYPAIANGGGANGGGGGGGGGGSAPGSFA 220

Query: 191 SNSEATTTRTSQPDYPLDSIPYGIPSKDYRY-LQGLRPEAGVHSFFSEASGSSRAVQMDA 250
             S       +   Y   ++  G  +KD+RY   G+RP A  HS     +       MD 
Sbjct: 221 LGSNTQLHMDNAASY--STVAAGAGNKDFRYSAYGVRPLADEHSPLITGA-------MDT 280

Query: 251 PMDNTWPIMPSRSPSFPA---------SKSTENSIFQSGYLQH---SFFGGEYPSGETLK 310
            +DN+W ++PS++ +F           S+  +N+I     ++    SFFG +Y + ++ K
Sbjct: 281 SIDNSWCLLPSQTSTFSVSSYPMLGNLSELDQNTICSLPKVEREPLSFFGSDYVTVDSGK 340

Query: 311 QEAQSLQPLFDEWPRTRESWTGLDERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPHG 334
           QE Q+L+P FDEWP+ R+SW  L + ++  +FS TQLSISIPM++SD STTSS+S +G
Sbjct: 341 QENQTLRPFFDEWPKARDSWPDLADDNSLATFSATQLSISIPMATSDFSTTSSRSHNG 383

[Close]
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF4_ORYSJ (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica GN=GRF4 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-65
Identity = 162/368 (44.02%), Postives = 224/368 (60.87%), Query Frame = 1 

Query: 3   NSGGGG----EDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDL 62
           ++GGGG    ED   T     +    +   PFT  Q++ELE QALI+KY++AG+PVPPDL
Sbjct: 36  SAGGGGVAMGEDAPMTARWPPAAAARL--PPFTAAQYEELEQQALIYKYLVAGVPVPPDL 95

Query: 63  VLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCE 122
           VLPI+R  +S++ RF++HP + Y  ++GKK+DPEPGRCRRTDGKKWRCSK+A P+SKYCE
Sbjct: 96  VLPIRRGLDSLAARFYNHPALGYGPYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCE 155

Query: 123 RHMHRGRNRSRKPVESQTMTQS---SSTATSLTATGSSSTGAGSFHGLPL-NALSNSEAT 182
           RHMHRGRNRSRKPVE+Q + QS   SS   S  A  ++++   SF    L  A++ S   
Sbjct: 156 RHMHRGRNRSRKPVETQLVAQSQPPSSVVGSAAAPLAAASNGSSFQNHSLYPAIAGSNGG 215

Query: 183 TTRTSQPD----------YPLDSIPY----GIPSKDYRY-LQGLRPEAGVHS-FFSEASG 242
               + P           +  ++ PY    G   KD RY   G R  A   S   +EA  
Sbjct: 216 GGGRNMPSSFGSALGSQLHMDNAAPYAAVGGGTGKDLRYTAYGTRSLADEQSQLITEAIN 275

Query: 243 SSRAVQMDAPMDNTWPIMPSRSPSFPAS------------KSTENSIFQSGYLQHSFFGG 302
           +S        ++N W ++PS++  FP S            ++T +S+ +      SFFG 
Sbjct: 276 TS--------IENPWRLLPSQNSPFPLSSYSQLGALSDLGQNTPSSLSKVQRQPLSFFGN 335

Query: 303 EYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DERSNQTSFSTTQLSISIPMSSSDLST 334
           +Y + +++KQE Q+L+P FDEWP+ R+SW+ L DE +N +SFS TQLSISIPM+SSD S 
Sbjct: 336 DYAAVDSVKQENQTLRPFFDEWPKGRDSWSDLADENANLSSFSGTQLSISIPMASSDFSA 393

[Close]
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF5_ORYSJ (Growth-regulating factor 5 OS=Oryza sativa subsp. japonica GN=GRF5 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.5e-63
Identity = 154/361 (42.66%), Postives = 204/361 (56.51%), Query Frame = 1 

Query: 12  SRTVAATASGMMGMN----RSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQ-RSF 71
           S + +A A G+ G       + FT  QW ELE QALI+KY++AG+PVP DL+LPI+  S 
Sbjct: 3   SSSPSAAAPGIGGYQPQRGAAVFTAAQWAELEQQALIYKYLVAGVPVPGDLLLPIRPHSS 62

Query: 72  ESISHRF-----------FHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSK 131
            + ++ F            HHP+++Y ++YGKK+DPEP RCRRTDGKKWRCSK+A+P+SK
Sbjct: 63  AAATYSFANPAAAPFYHHHHHPSLSYYAYYGKKLDPEPWRCRRTDGKKWRCSKEAHPDSK 122

Query: 132 YCERHMHRGRNRSRKPVESQTMTQSSSTATSL----TATGS------SSTGAGSFHGLPL 191
           YCERHMHRGRNRSRKPVES+T   +  +   L    TAT        S T     HGL L
Sbjct: 123 YCERHMHRGRNRSRKPVESKTAAPAPQSQPQLSNVTTATHDTDAPLPSLTVGAKTHGLSL 182

Query: 192 NALSNSEATTTRTSQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQM 251
               +S+          + +D+  YG      +Y  G + + G  SFFS ASG++R   +
Sbjct: 183 GGAGSSQ----------FHVDAPSYGS-----KYSLGAKADVGELSFFSGASGNTRGFTI 242

Query: 252 DAPMDNTWPIMPSRSPSFPASKSTENSIFQSGYL-----------------------QHS 311
           D+P D++W  +PS  P +P SK  ++ +    Y                        + S
Sbjct: 243 DSPTDSSWHSLPSSVPPYPMSKPRDSGLLPGAYSYSHLEPSQELGQVTIASLSQEQERRS 302

Query: 312 FFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGLD-ERSNQTSFSTTQLSISIPMSSS 323
           F GG       +K E Q L+P FDEWP  R+SW+ +D ERSNQTSFSTTQLSISIPM   
Sbjct: 303 FGGGAGGMLGNVKHENQPLRPFFDEWPGRRDSWSEMDEERSNQTSFSTTQLSISIPMPRC 348

[Close]
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF1_ORYSI (Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.0e-43
Identity = 145/393 (36.90%), Postives = 188/393 (47.84%), Query Frame = 1 

Query: 20  SGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSF-------ESISHR 79
           SG  G  R PFT  QWQELEHQALI+KYM +G P+P DL+LP++RSF        S S  
Sbjct: 9   SGGAGGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLA 68

Query: 80  FFHHPTMAYCSF---YGKKV-DPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRS 139
           F   P++ +  F   +G+K  DPEPGRCRRTDGKKWRCSK+AYP+SKYCE+HMHRG+NRS
Sbjct: 69  FPPQPSLGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRS 128

Query: 140 RKPVE-----------SQTMTQSSSTATSLTATGSSSTGAGSFH------GLPLNALSNS 199
           RKPVE           S T   S+S+A     T ++S+ A S+         P  AL   
Sbjct: 129 RKPVEMSLATPPPPSSSATSAASNSSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGG 188

Query: 200 E--ATTTRT-SQPDYPLDSIP----------------YGIPSKDYRYLQGLRPEAGVHSF 259
              A T RT +   Y     P                Y +  K+Y Y    +   G H+F
Sbjct: 189 PYAAATARTPAAAAYHAQVSPFHLHIDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAF 248

Query: 260 FSEAS-----------GSSRAVQMDA-PMDNTWPIMPSRSPSFPASK------------S 319
           FS+ +           G  +  Q+   P  +T P+ P       A+              
Sbjct: 249 FSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDE 308

Query: 320 TENSIFQSGYLQHSFFGG-----EYPSGETLKQEAQS-LQPLFDEWPRTRES---WTGLD 333
            E    Q    QH F  G     E P+G      AQ  L+  FDEWP  + S   W GL+
Sbjct: 309 KERRQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLE 368

[Close]
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match: GRF1_ORYSJ (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.0e-42
Identity = 144/394 (36.55%), Postives = 190/394 (48.22%), Query Frame = 1 

Query: 20  SGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSF-------ESISHR 79
           SG  G  R PFT  QWQELEHQALI+KYM +G P+P DL+LP++RSF        S S  
Sbjct: 9   SGGAGGGRYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLA 68

Query: 80  FFHHPTMAYCSF---YGKKV-DPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRS 139
           F   P++ +  F   +G+K  DPEPGRCRRTDGKKWRCSK+AYP+SKYCE+HMHRG+NRS
Sbjct: 69  FPPQPSLGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRS 128

Query: 140 RKPVESQTMT-----QSSSTATSLTATG------SSSTGAGSFH------GLPLNALSNS 199
           RKPVE    T      S+++A S T+ G      ++S+ A S+         P  AL   
Sbjct: 129 RKPVEMSLATPPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGG 188

Query: 200 E--ATTTRT-SQPDYPLDSIP----------------YGIPSKDYRYLQGLRPEAGVHSF 259
              A T RT +   Y     P                Y +  K+Y Y    +   G H+F
Sbjct: 189 PYAAATARTPAAAAYHAQVSPFHLQLDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAF 248

Query: 260 FSEAS-----------GSSRAVQMDA-PMDNTWPIMPSRSPSFPAS-------------K 319
           FS+ +           G  +  Q+   P  +T P+ P       A+             +
Sbjct: 249 FSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDE 308

Query: 320 STENSIFQSGYLQHSFFGG-----EYPSGETLKQEAQS-LQPLFDEWPRTRES---WTGL 333
                  Q    QH F  G     E P+G      AQ  L+  FDEWP  + S   W GL
Sbjct: 309 KERRQQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGL 368

[Close]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A0A0LN73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432230 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 8.6e-170
Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1 

Query: 1   MNNSGGGGEDGSRTVA--ATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDL 60
           MNNSGGGGEDGSRTV    TASGMMGMNRSPFTVLQWQELE QALIFK+MMAG PVPP+L
Sbjct: 1   MNNSGGGGEDGSRTVVLGGTASGMMGMNRSPFTVLQWQELELQALIFKFMMAGQPVPPEL 60

Query: 61  VLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCE 120
           VL IQ+SFESISHRFFH PTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCE
Sbjct: 61  VLLIQKSFESISHRFFHQPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCE 120

Query: 121 RHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRT 180
           RHMHRGRNRSRKPVESQTMTQSSST TSLTATGSSSTG GSFHGLPLNALSNS+ TTT T
Sbjct: 121 RHMHRGRNRSRKPVESQTMTQSSSTVTSLTATGSSSTGTGSFHGLPLNALSNSQTTTTGT 180

Query: 181 SQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPS 240
           SQP YPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWP+M S
Sbjct: 181 SQPHYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPIDNTWPMMSS 240

Query: 241 RSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL 300
           RSPSFPASKSTENSIFQSGY QHSFFGGEY SGETLKQE QSLQPLFDEWPRTRESWTGL
Sbjct: 241 RSPSFPASKSTENSIFQSGYAQHSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGL 300

Query: 301 -DERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
            DERSNQTSFSTTQLSISIPM+SSDLSTTSSKSPH
Sbjct: 301 DDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH 335

[Close]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: M5XGT1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022199mg PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.4e-134
Identity = 249/331 (75.23%), Postives = 281/331 (84.89%), Query Frame = 1 

Query: 4   SGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQ 63
           +GGGG  G       A+GM GM RSPFTV QWQELEHQALIFKYMMAG+PVPPDLVLPIQ
Sbjct: 6   TGGGGGGGG---GGGAAGMTGM-RSPFTVSQWQELEHQALIFKYMMAGMPVPPDLVLPIQ 65

Query: 64  RSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHR 123
           +SFESIS RFFHHPTM YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERHMHR
Sbjct: 66  KSFESISQRFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHR 125

Query: 124 GRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQPDY 183
           GRNRSRKPVESQTMTQSSST TSLT T SSS G GSF  LPLNA  N++ T++ T+Q  Y
Sbjct: 126 GRNRSRKPVESQTMTQSSSTVTSLTVTASSS-GTGSFQNLPLNAFGNTQGTSSGTNQSHY 185

Query: 184 PLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSF 243
            +DSIP+GIP+KDYRYLQGL+PE G HSF S+ASGS+R +QMD+P+D+TWP+MPSR  SF
Sbjct: 186 QIDSIPFGIPNKDYRYLQGLKPEIGEHSFLSDASGSNRGLQMDSPLDSTWPLMPSRVGSF 245

Query: 244 PASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DERS 303
           PASKS + SI    Y QHSFF   +PS E++KQE QSL+P FDEWP+ R+SW+GL DERS
Sbjct: 246 PASKSGDGSILHHDYPQHSFFNNAFPS-ESVKQEGQSLRPFFDEWPKGRDSWSGLEDERS 305

Query: 304 NQTSFSTTQLSISIPMSSSDLSTTSSKSPHG 334
           NQTSFSTTQLSISIPM+SSD+S TSS+SPHG
Sbjct: 306 NQTSFSTTQLSISIPMTSSDISATSSRSPHG 330

[Close]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: F6HEC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01450 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.4e-132
Identity = 239/316 (75.63%), Postives = 272/316 (86.08%), Query Frame = 1 

Query: 19  ASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESISHRFFHHPT 78
           A+GMM +  SPFTV QWQELEHQALIFKY+MAGLPVPPDLVLPIQ+SFES+S RFFHHPT
Sbjct: 2   ATGMM-VRSSPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSSRFFHHPT 61

Query: 79  MAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVESQTMT 138
           M YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERHMHRGRNRSRKPVESQT T
Sbjct: 62  MGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTTT 121

Query: 139 QSSSTATSLTATGSSSTGAGSFHGLPLNALSNSE-ATTTRTSQPDYPLDSIPYGIPSKDY 198
           QSSST TSLT TG S +GAG+F  LPL   +N +    + T+Q  + ++ IPYGIP+KDY
Sbjct: 122 QSSSTVTSLTVTGGSGSGAGTFQNLPLQNFNNPQGGPGSGTNQSQFHMEPIPYGIPNKDY 181

Query: 199 RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSFPASKSTENSIFQSG 258
           RYL GL+PE G HSFFSEASGS+R +QMD+P+D+TWP+MPSR  SFP SKS+ENSI QS 
Sbjct: 182 RYLHGLKPEVGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKSSENSILQSD 241

Query: 259 YLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DERSNQTSFSTTQLSISI 318
           Y QHSFF  E+ SGE +KQE QSL+P FDEWP+TR+SW+GL +ERSNQTSFSTTQLSISI
Sbjct: 242 YPQHSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFSTTQLSISI 301

Query: 319 PMSSSDLSTTSSKSPH 333
           PM+SSD STTSS+SPH
Sbjct: 302 PMASSDFSTTSSRSPH 316

[Close]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A067EAQ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020051mg PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 7.1e-132
Identity = 246/335 (73.43%), Postives = 278/335 (82.99%), Query Frame = 1 

Query: 1   MNNSGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVL 60
           MN+  GGG  G     A   GMMGM  SPFTV QWQELEHQALIFKYM+AGLPVPPDLVL
Sbjct: 1   MNSGNGGGGAGG----AGGLGMMGMRASPFTVSQWQELEHQALIFKYMVAGLPVPPDLVL 60

Query: 61  PIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERH 120
           PIQ+SFESISHRFFHHPTM YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERH
Sbjct: 61  PIQKSFESISHRFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERH 120

Query: 121 MHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQ 180
           MHRGRNRSRKPVESQT+TQSSST TSLTATGSS  G GS+  LPL+A  N + TT+ T+Q
Sbjct: 121 MHRGRNRSRKPVESQTITQSSSTVTSLTATGSSG-GTGSYQNLPLHAFGNPQGTTSGTNQ 180

Query: 181 PDYPLDSIPYGIPSKDYRYL--QGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPS 240
             Y +DSI  GIP+KDYRYL  QGL+PE G HSFF+EASGS+R +QMD+P+D+ WP+M S
Sbjct: 181 SHYHVDSISCGIPNKDYRYLQVQGLKPEVGEHSFFTEASGSNRGLQMDSPIDSAWPLMQS 240

Query: 241 RSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL 300
           R  S P SKS+  SI Q+ Y QHSFF  E+ SGE +KQE QSL+P FDEWP+TR+SW+GL
Sbjct: 241 RVSSHPQSKSSNTSILQNDYPQHSFFNSEFTSGEPVKQEGQSLRPFFDEWPKTRDSWSGL 300

Query: 301 -DERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
            DERS+QTSFSTT+LSISIPM+SSD S TSS+SPH
Sbjct: 301 EDERSHQTSFSTTKLSISIPMASSDFSATSSRSPH 330

[Close]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match: A0A061EZZ6_THECC (Growth-regulating factor 5 OS=Theobroma cacao GN=TCM_025561 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 7.8e-131
Identity = 247/347 (71.18%), Postives = 277/347 (79.83%), Query Frame = 1 

Query: 1   MNNSGGGGEDGSRTVAA--------TASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGL 60
           MNN GGGG  G    A         T  GMM M  SPFTV QWQELEHQALIFKYMMAGL
Sbjct: 1   MNNGGGGGGGGGGGGAGSGGGGGMGTGGGMMAMRSSPFTVSQWQELEHQALIFKYMMAGL 60

Query: 61  PVPPDLVLPIQRSFESISHRFFHHPTM------AYCSFYGKKVDPEPGRCRRTDGKKWRC 120
           PVP DLVLPIQ+SFESISHRFFHHPT+       YCSFYGKKVDPEPGRCRRTDGKKWRC
Sbjct: 61  PVPHDLVLPIQKSFESISHRFFHHPTIECDFAVGYCSFYGKKVDPEPGRCRRTDGKKWRC 120

Query: 121 SKDAYPNSKYCERHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLN 180
           SKDAYP+SKYCERHMHRGRNRSRKPVESQTMTQSSST TSLT +GSS  G GSF  LPL+
Sbjct: 121 SKDAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTVSGSSG-GTGSFQNLPLH 180

Query: 181 ALSNSEATTTRTSQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMD 240
           A  +++ T + TSQ  Y ++SIPYGIPSKDYRYLQGL+PE G HSFFSEASGS+R++Q++
Sbjct: 181 AFGSTQGTASGTSQSHYHMESIPYGIPSKDYRYLQGLKPEVGEHSFFSEASGSNRSLQIE 240

Query: 241 APMDNTWPIMPSRSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFD 300
             +DNTWP+M SR  S+P SKS+ N I Q+   QHSFF  E+ SGE +K E QSL+P FD
Sbjct: 241 TQLDNTWPLMQSRVSSYPQSKSSGNPILQNDCPQHSFFSNEFNSGEPVKHEGQSLRPFFD 300

Query: 301 EWPRTRESWTGL-DERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
           EWP+ R+SW+ L DERSNQTSFSTTQLSISIPM+SSD STTSS+SPH
Sbjct: 301 EWPKPRDSWSALEDERSNQTSFSTTQLSISIPMASSDFSTTSSRSPH 346

[Close]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT3G13960.1 (AT3G13960.1 growth-regulating factor 5)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 82/166 (49.40%), Postives = 115/166 (69.28%), Query Frame = 1 

Query: 20  SGMMG--MNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFE-SISHRFFHH 79
           SG  G  + R PFT  QW+ELEHQALI+KYM++G+PVPP+L+  I+RS + S+  R   H
Sbjct: 5   SGSSGRTIGRPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRSLDTSLVSRLLPH 64

Query: 80  PTMAYCSF---YGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVE 139
            ++ +  +   +G+K DPEPGRCRRTDGKKWRCS++AYP+SKYCE+HMHRGRNR+RK ++
Sbjct: 65  QSLGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD 124

Query: 140 SQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTS 180
               T +  T+ SL+ T +++        L  ++ SNS +TT   S
Sbjct: 125 QNQTTTTPLTSPSLSFTNNNNPSP----TLSSSSSSNSSSTTYSAS 166

[Close]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT2G06200.1 (AT2G06200.1 growth-regulating factor 6)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 71/124 (57.26%), Postives = 86/124 (69.35%), Query Frame = 1 

Query: 27  RSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSF------ESISHRFFHHPTMA 86
           R PFT  QW+ELE+QAL+FKY+ A +PVPP L+  I+R F       S S   F  PT++
Sbjct: 4   RIPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLS 63

Query: 87  -------YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNR--SRKP 136
                  Y    G+K+D EPGRCRRTDGKKWRCSK+AYP+SKYCERHMHRG+NR  SRKP
Sbjct: 64  PHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123

[Close]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT2G36400.1 (AT2G36400.1 growth-regulating factor 3)

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-32
Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 30  FTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESISHRFFHHPTMAYCSFYGKK- 89
           F+  QWQELE QALI++YM+AG  VP +L+LPI++S   +S  +F H  + +   Y    
Sbjct: 77  FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLHLSPSYFLHHPLQHLPHYQPAW 136

Query: 90  ------VDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVESQT------ 149
                 +DPEPGRCRRTDGKKWRCS+D +   KYCERHMHRGRNRSRKPVE+ T      
Sbjct: 137 YLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNATA 196

Query: 150 MTQSSSTATSLTATGSSSTGAGSFHG 163
            + +SS A + T T +++T   +F G
Sbjct: 197 TSMASSVAAAATTTTATTTSTFAFGG 222

[Close]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT4G37740.1 (AT4G37740.1 growth-regulating factor 2)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-30
Identity = 79/172 (45.93%), Postives = 106/172 (61.63%), Query Frame = 1 

Query: 3   NSGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPI 62
           +SGG G  G     +      G+ + PFT+ QW ELE QALI+KY+ A +PVP  L++ I
Sbjct: 139 SSGGYGSGGMMMNMSMQGNFTGV-KGPFTLTQWAELEQQALIYKYITANVPVPSSLLISI 198

Query: 63  QRSFE---SISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCER 122
           ++SF    S+    F   T  +  F G  +DPEPGRCRRTDGKKWRCS+DA P+ KYCER
Sbjct: 199 KKSFYPYGSLPPSSFGWGTF-HLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCER 258

Query: 123 HMHRGRNRSRKPVESQT-MTQSSSTATSLTATGSSSTGAGSFHGLPLNALSN 171
           H++RGR+RSRKPVE Q+   Q+++ A+    T      AG+ +     A SN
Sbjct: 259 HINRGRHRSRKPVEVQSGQNQTAAAASKAVTTPQQPVVAGNTNRSNARASSN 308

[Close]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match: AT3G52910.1 (AT3G52910.1 growth-regulating factor 4)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1 

Query: 30  FTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSF--ESISHRFFHHPTMAYCS---- 89
           F+  QWQELE QALI++YM+AG  VP +L+LPI++S   +S  H F HHP          
Sbjct: 83  FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSLLHQSPMH-FLHHPLQHSFPHHQP 142

Query: 90  --FYGK-KVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRKPVESQTMTQS 149
             ++G+  +DPEPGRC+RTDGKKWRCS+D     KYC+RH+HRGRNRSRKPVE+ T T  
Sbjct: 143 SWYWGRGAMDPEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRSRKPVETATTT-- 202

Query: 150 SSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQP 182
             T T+ T   S   G    HG      +N+   ++ +SQP
Sbjct: 203 -ITTTATTTASSFVLGEELGHG-----PNNNHFFSSGSSQP 234

[Close]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|659125640|ref|XP_008462790.1| (PREDICTED: growth-regulating factor 4-like [Cucumis melo])

HSP 1 Score: 605.9 bits (1561), Expect = 4.2e-170
Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1 

Query: 1   MNNSGGGGEDGSRTVA--ATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDL 60
           MNNSGGGGEDGSRTV    TASGMMGMNRSPFTVLQWQELE QALIFK+MMAG PVPP+L
Sbjct: 1   MNNSGGGGEDGSRTVVLGGTASGMMGMNRSPFTVLQWQELELQALIFKFMMAGQPVPPEL 60

Query: 61  VLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCE 120
           VL IQ+SFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCE
Sbjct: 61  VLLIQKSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCE 120

Query: 121 RHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRT 180
           RHMHRGRNRSRKPVESQTMTQSSST TSLTATGSSSTG GSFHGLPLNALSNS+ TTT T
Sbjct: 121 RHMHRGRNRSRKPVESQTMTQSSSTVTSLTATGSSSTGTGSFHGLPLNALSNSQTTTTGT 180

Query: 181 SQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPS 240
           SQP YPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWP+M S
Sbjct: 181 SQPHYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPIDNTWPMMSS 240

Query: 241 RSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL 300
           RSPSFP SKSTENSIFQSGY QHSFFGGEY SGETLKQE QSLQPLFDEWPRTRESWTGL
Sbjct: 241 RSPSFPTSKSTENSIFQSGYAQHSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGL 300

Query: 301 -DERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
            DERSNQTSFSTTQLSISIPM+SSDLSTTSSKSPH
Sbjct: 301 DDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH 335

[Close]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|778673778|ref|XP_011650059.1| (PREDICTED: growth-regulating factor 4-like [Cucumis sativus])

HSP 1 Score: 604.4 bits (1557), Expect = 1.2e-169
Identity = 309/335 (92.24%), Postives = 317/335 (94.63%), Query Frame = 1 

Query: 1   MNNSGGGGEDGSRTVA--ATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDL 60
           MNNSGGGGEDGSRTV    TASGMMGMNRSPFTVLQWQELE QALIFK+MMAG PVPP+L
Sbjct: 1   MNNSGGGGEDGSRTVVLGGTASGMMGMNRSPFTVLQWQELELQALIFKFMMAGQPVPPEL 60

Query: 61  VLPIQRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCE 120
           VL IQ+SFESISHRFFH PTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCE
Sbjct: 61  VLLIQKSFESISHRFFHQPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCE 120

Query: 121 RHMHRGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRT 180
           RHMHRGRNRSRKPVESQTMTQSSST TSLTATGSSSTG GSFHGLPLNALSNS+ TTT T
Sbjct: 121 RHMHRGRNRSRKPVESQTMTQSSSTVTSLTATGSSSTGTGSFHGLPLNALSNSQTTTTGT 180

Query: 181 SQPDYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPS 240
           SQP YPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWP+M S
Sbjct: 181 SQPHYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPIDNTWPMMSS 240

Query: 241 RSPSFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL 300
           RSPSFPASKSTENSIFQSGY QHSFFGGEY SGETLKQE QSLQPLFDEWPRTRESWTGL
Sbjct: 241 RSPSFPASKSTENSIFQSGYAQHSFFGGEYASGETLKQEGQSLQPLFDEWPRTRESWTGL 300

Query: 301 -DERSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
            DERSNQTSFSTTQLSISIPM+SSDLSTTSSKSPH
Sbjct: 301 DDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH 335

[Close]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|596032228|ref|XP_007219489.1| (hypothetical protein PRUPE_ppa022199mg [Prunus persica])

HSP 1 Score: 486.1 bits (1250), Expect = 4.9e-134
Identity = 249/331 (75.23%), Postives = 281/331 (84.89%), Query Frame = 1 

Query: 4   SGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQ 63
           +GGGG  G       A+GM GM RSPFTV QWQELEHQALIFKYMMAG+PVPPDLVLPIQ
Sbjct: 6   TGGGGGGGG---GGGAAGMTGM-RSPFTVSQWQELEHQALIFKYMMAGMPVPPDLVLPIQ 65

Query: 64  RSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHR 123
           +SFESIS RFFHHPTM YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERHMHR
Sbjct: 66  KSFESISQRFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHR 125

Query: 124 GRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSEATTTRTSQPDY 183
           GRNRSRKPVESQTMTQSSST TSLT T SSS G GSF  LPLNA  N++ T++ T+Q  Y
Sbjct: 126 GRNRSRKPVESQTMTQSSSTVTSLTVTASSS-GTGSFQNLPLNAFGNTQGTSSGTNQSHY 185

Query: 184 PLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSF 243
            +DSIP+GIP+KDYRYLQGL+PE G HSF S+ASGS+R +QMD+P+D+TWP+MPSR  SF
Sbjct: 186 QIDSIPFGIPNKDYRYLQGLKPEIGEHSFLSDASGSNRGLQMDSPLDSTWPLMPSRVGSF 245

Query: 244 PASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DERS 303
           PASKS + SI    Y QHSFF   +PS E++KQE QSL+P FDEWP+ R+SW+GL DERS
Sbjct: 246 PASKSGDGSILHHDYPQHSFFNNAFPS-ESVKQEGQSLRPFFDEWPKGRDSWSGLEDERS 305

Query: 304 NQTSFSTTQLSISIPMSSSDLSTTSSKSPHG 334
           NQTSFSTTQLSISIPM+SSD+S TSS+SPHG
Sbjct: 306 NQTSFSTTQLSISIPMTSSDISATSSRSPHG 330

[Close]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|359489864|ref|XP_002270427.2| (PREDICTED: growth-regulating factor 4-like isoform X2 [Vitis vinifera])

HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133
Identity = 246/332 (74.10%), Postives = 280/332 (84.34%), Query Frame = 1 

Query: 3   NSGGGGEDGSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPI 62
           NSGGG   G    A+ A+GMM +  SPFTV QWQELEHQALIFKY+MAGLPVPPDLVLPI
Sbjct: 2   NSGGGSVGG----ASMATGMM-VRSSPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPI 61

Query: 63  QRSFESISHRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMH 122
           Q+SFES+S RFFHHPTM YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERHMH
Sbjct: 62  QKSFESMSSRFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMH 121

Query: 123 RGRNRSRKPVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSE-ATTTRTSQP 182
           RGRNRSRKPVESQT TQSSST TSLT TG S +GAG+F  LPL   +N +    + T+Q 
Sbjct: 122 RGRNRSRKPVESQTTTQSSSTVTSLTVTGGSGSGAGTFQNLPLQNFNNPQGGPGSGTNQS 181

Query: 183 DYPLDSIPYGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSP 242
            + ++ IPYGIP+KDYRYL GL+PE G HSFFSEASGS+R +QMD+P+D+TWP+MPSR  
Sbjct: 182 QFHMEPIPYGIPNKDYRYLHGLKPEVGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVS 241

Query: 243 SFPASKSTENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DE 302
           SFP SKS+ENSI QS Y QHSFF  E+ SGE +KQE QSL+P FDEWP+TR+SW+GL +E
Sbjct: 242 SFPPSKSSENSILQSDYPQHSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEE 301

Query: 303 RSNQTSFSTTQLSISIPMSSSDLSTTSSKSPH 333
           RSNQTSFSTTQLSISIPM+SSD STTSS+SPH
Sbjct: 302 RSNQTSFSTTQLSISIPMASSDFSTTSSRSPH 328

[Close]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match: gi|297737265|emb|CBI26466.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 481.9 bits (1239), Expect = 9.2e-133
Identity = 242/324 (74.69%), Postives = 276/324 (85.19%), Query Frame = 1 

Query: 11  GSRTVAATASGMMGMNRSPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQRSFESIS 70
           GS   A+ A+GMM +  SPFTV QWQELEHQALIFKY+MAGLPVPPDLVLPIQ+SFES+S
Sbjct: 49  GSVGGASMATGMM-VRSSPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMS 108

Query: 71  HRFFHHPTMAYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPNSKYCERHMHRGRNRSRK 130
            RFFHHPTM YCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYP+SKYCERHMHRGRNRSRK
Sbjct: 109 SRFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRK 168

Query: 131 PVESQTMTQSSSTATSLTATGSSSTGAGSFHGLPLNALSNSE-ATTTRTSQPDYPLDSIP 190
           PVESQT TQSSST TSLT TG S +GAG+F  LPL   +N +    + T+Q  + ++ IP
Sbjct: 169 PVESQTTTQSSSTVTSLTVTGGSGSGAGTFQNLPLQNFNNPQGGPGSGTNQSQFHMEPIP 228

Query: 191 YGIPSKDYRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPIMPSRSPSFPASKST 250
           YGIP+KDYRYL GL+PE G HSFFSEASGS+R +QMD+P+D+TWP+MPSR  SFP SKS+
Sbjct: 229 YGIPNKDYRYLHGLKPEVGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKSS 288

Query: 251 ENSIFQSGYLQHSFFGGEYPSGETLKQEAQSLQPLFDEWPRTRESWTGL-DERSNQTSFS 310
           ENSI QS Y QHSFF  E+ SGE +KQE QSL+P FDEWP+TR+SW+GL +ERSNQTSFS
Sbjct: 289 ENSILQSDYPQHSFFSSEFASGEVVKQEGQSLRPFFDEWPKTRDSWSGLEEERSNQTSFS 348

Query: 311 TTQLSISIPMSSSDLSTTSSKSPH 333
           TTQLSISIPM+SSD STTSS+SPH
Sbjct: 349 TTQLSISIPMASSDFSTTSSRSPH 371

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g01680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRF3_ORYSJ6.7e-6742.74Growth-regulating factor 3 OS=Oryza sativa subsp. japonica GN=GRF3 PE=3 SV=2[more]
GRF4_ORYSJ2.8e-6544.02Growth-regulating factor 4 OS=Oryza sativa subsp. japonica GN=GRF4 PE=2 SV=1[more]
GRF5_ORYSJ4.5e-6342.66Growth-regulating factor 5 OS=Oryza sativa subsp. japonica GN=GRF5 PE=2 SV=1[more]
GRF1_ORYSI4.0e-4336.90Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1 PE=2 SV=1[more]
GRF1_ORYSJ2.0e-4236.55Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1 PE=3 SV=1[more]
BLAST of Cp4.1LG16g01680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN73_CUCSA8.6e-17092.24Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432230 PE=4 SV=1[more]
M5XGT1_PRUPE3.4e-13475.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022199mg PE=4 SV=1[more]
F6HEC9_VITVI2.4e-13275.63Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01450 PE=4 SV=... [more]
A0A067EAQ2_CITSI7.1e-13273.43Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020051mg PE=4 SV=1[more]
A0A061EZZ6_THECC7.8e-13171.18Growth-regulating factor 5 OS=Theobroma cacao GN=TCM_025561 PE=4 SV=1[more]
BLAST of Cp4.1LG16g01680 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13960.11.2e-3749.40 growth-regulating factor 5[more]
AT2G06200.11.1e-3257.26 growth-regulating factor 6[more]
AT2G36400.12.6e-3250.00 growth-regulating factor 3[more]
AT4G37740.11.8e-3045.93 growth-regulating factor 2[more]
AT3G52910.11.6e-2947.83 growth-regulating factor 4[more]
BLAST of Cp4.1LG16g01680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125640|ref|XP_008462790.1|4.2e-17092.24PREDICTED: growth-regulating factor 4-like [Cucumis melo][more]
gi|778673778|ref|XP_011650059.1|1.2e-16992.24PREDICTED: growth-regulating factor 4-like [Cucumis sativus][more]
gi|596032228|ref|XP_007219489.1|4.9e-13475.23hypothetical protein PRUPE_ppa022199mg [Prunus persica][more]
gi|359489864|ref|XP_002270427.2|2.4e-13374.10PREDICTED: growth-regulating factor 4-like isoform X2 [Vitis vinifera][more]
gi|297737265|emb|CBI26466.3|9.2e-13374.69unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0032502developmental process
GO:0006351transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR014978Gln-Leu-Gln_QLQ
IPR014977WRC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g01680.1Cp4.1LG16g01680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014977WRC domainPFAMPF08879WRCcoord: 91..133
score: 8.7
IPR014977WRC domainPROFILEPS51667WRCcoord: 90..134
score: 25
IPR014978Glutamine-Leucine-Glutamine, QLQPFAMPF08880QLQcoord: 29..63
score: 2.4
IPR014978Glutamine-Leucine-Glutamine, QLQSMARTSM00951QLQ_2coord: 28..64
score: 1.2
IPR014978Glutamine-Leucine-Glutamine, QLQPROFILEPS51666QLQcoord: 29..64
score: 23
NoneNo IPR availablePANTHERPTHR31602:SF8SUBFAMILY NOT NAMEDcoord: 1..331
score: 4.2E