Cp4.1LG16g00400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTGTTTTTCCCTAATGTAATTACCAAATTATGTTTCCTCCGCAAGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTCATTTATCTCTCGTCGTCGTCGGAGGAGGACGACGAAGAGGAATCAGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTTTGATAATGGATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGGTACGTTTCTTCTTTTTCCATTGATAATTCGCCATTGTGTTGAGATTCGGGTTCAAAGTCGAAGTGTCGATTGAGAGAAATGAAATCGATGATTAGATAGGTTGTTGGGAAATTCATAGGGTATTGGATCTCTTAATTATCTGATTTGAAACATGTTCTGTCGCAGAGAATAAAAATTTAGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGTACGTGGATTCTTCATCTTTAAACTCAAGATACACATCTTAATATTGCGTTCAATTAGGAAATTTATGAAGTTTCGTCATCTAGTCCGATCGCTGAATATTTGAAATTGTTAGTACTTTTTCATGGTGGAAATCTGCTATGTACTCATCTATGGAAGTCTTCTGATATTTAGAGAAGCGACTATTGAGTGTTTCGGTAAATGTGGATTGTCACCAATTATGATTCTATACACTTTAATAGATGGAAAACAGAAGATTTTTAGATAATTTTATGTTGTGAAATTGAGTTTTCCTTGTTCCTCAACGGATTTTGGAGCCTTTAACTTCTAGTTCTGCATTGATACATATCAAATCATATGGCAGCCAAACATAATTTGGGTTTGGTACTGTTTACCATTTGTTGCTGGTAAATCTTGATTAACTGATCTGTATTCTACGTCTTCCCTTCTGTTGTAATCACTTTGGGTCTCTGCAAAGTTGCACCATTATATAGAAGTTATTAAGCAAAAAGGGCGGAGATTCTGAAAGAATAATGTGCCATTTATTCAATTCTTCACAAGGAGTTAAATATACAATAGGTATTAGGCACAACTTGTGATATCCCACATCGGTTGGAGCGGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCTTAGTAAACACATTTTAAAACCGTGAAGCTAAAGACGATACGTAACGGGCCAAAATGGACAATATCTGCTAGCGGTGGCTGTTACAAGTGGTATCAAAGCAAGGCACCCAGCGGTGTGCTAGCGAGGACGCTGGGCCCCCAAGGGGGTGGATTGTGAGATCCTACATCGTTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGAAACGTCTCCATAGTAGACACGTTTCAAACCATGAAACTAACGGCGATACATAACGGGCTAAAGCGGACAATATTGTTAGCGGTGACTATTACACAACTACTCCTAACAAAACATCTTGGCTCTCTTCTTTTTCTCCCAACTCAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTAATTTCTATATACATTTGTCATAGTATTTTCTTTGATCACTCTTTTAGTGGCTGTAATTATTCTATTAAAACATCAATGCAGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTACTCAAACAAGTTTCTCTTCCACCACTAGTCTTGTGTTAGATATTTTAGATTTGCACTCCTAATTCTTGTAGCTTAAATTTTAACAGGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTAAGGCTGTTTTTTCTGTTCTAGCAATCATTTTCTCATATCGTAATTCAAATTGGTTGTGCATTATTAGTATCATACTTTTTAATATGCTCAATATGTTTACATCTAATATTCATTTGCGATTCATAAATATTTTTTCATTTGCGATTCATATTTCCAACGCTTGTGACTATAACGTGCTAGGTCGAAGTTTTATGGAGCACGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGGTAAGTTCTCTACATACATAAATATATTTTATTTTCATACAAAGCATTTGAGTTGTGGGGATTTGAACTGTGGATGAAAATTTTAAATCAAATTGATTTTTTTAGTTGAACCATTGCTGGTGGAAGTGTACGTATGTAGATATGAATTTAGTAACAGAACAATGCTCATTGTGTCTTAAATTCTCAAGCATGAACCAAGTCTGTAAGTTTGGCTCCAAGATATCCATCCTTTCCACATTTGTATAAAAGAGCTAAAGTTCTAAGAAATATGATTGCTATTGTATCGTCACCTGAGTCAATTGATGGATGTCATCAATAGTTGACCTTGTTTGATTGTATGTATGTATGATTTATGATTTATGAATTTTGTGATAGGGATATCTCACTGATCAAACATGTATGGATGAATAGAGTATGTTTTCCTATGTTATAGGTGATCGATAAGAATATCTCCCTAGCAAAACATGCATGAGCGAACCAAACTAAGATTAGGGTGGTGGAGCTAGAGCAGATTATACGTTGACATAGGTCAGTACGTTCTCAGTAGACCTAGCACCTTAGGATCGTGAGCGGTGTTCATGAAAGTGGCGTTTGGCTCCAAGATATTCATCCTTTCCAAATTTGTATAAAAGAGCTAAAGTTTGTATGTCAGATCTTGTTTCTGATCATAAATGCAACCCAATGACCAATATTGCTTTGTTTTCTTCATTATTTGTATGTTTTACTCAGCTTTGGAATGATGAAGCTGAAAGAGTTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTCGTACAAATCGGAGGTATAATTGACAACCACTACTCCCCAAAACATGAAAAGGAGCTTGCTTGCTGCAATTGAATAAAAGATTGAATGTTACCATATTTTTGTATTGTAATGTCCAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTTACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAATAACTATTCAAATAATGTAACCAAAATTGACTTCAAAGTAGCAGGAAAAGTCAAAACAGGCATTTAGGTTCGTTTGTAGATGTAATTAGCCTTTACTTTCACGATATCTTGTGATAAAATAAGGTTTTAAATGAATTTAATTAGATGTAAAATGGCTAAGATCAACACTATCTCATATATTAAGTTCGTATTATGTTTTCAATATATTAG TATTGTTTTTCCCTAATGTAATTACCAAATTATGTTTCCTCCGCAAGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTCATTTATCTCTCGTCGTCGTCGGAGGAGGACGACGAAGAGGAATCAGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTTTGATAATGGATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTCGAAGTTTTATGGAGCACGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGCTTTGGAATGATGAAGCTGAAAGAGTTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTCGTACAAATCGGAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTTACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAATAACTATTCAAATAATGTAACCAAAATTGACTTCAAAGTAGCAGGAAAAGTCAAAACAGGCATTTAGGTTCGTTTGTAGATGTAATTAGCCTTTACTTTCACGATATCTTGTGATAAAATAAGGTTTTAAATGAATTTAATTAGATGTAAAATGGCTAAGATCAACACTATCTCATATATTAAGTTCGTATTATGTTTTCAATATATTAG ATGCCTGAAAGGGGTAGCAAACGAAGAGTCATTTATCTCTCGTCGTCGTCGGAGGAGGACGACGAAGAGGAATCAGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAGAGGAGTTTGATAATGGATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCGTTAACACTTAATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGCGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAAAGCTATGGTGCAAGTAAACAGCAGCATACTTTTACTGTCGAAGTTTTATGGAGCACGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGCTTTGGAATGATGAAGCTGAAAGAGTTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTCGTACAAATCGGAGGAAGTGGAAAGAATCAAGGACATGTTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAG MPERGSKRRVIYLSSSSEEDDEEESDEEYDDEDDDEGESEEEFDNGCSDNDCDEVLSQRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSTGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQKRKRKLVQIGGSGKNQGHVQLPRQALNSNGSRKSMRSRDKNNAVRRHPA
BLAST of Cp4.1LG16g00400 vs. Swiss-Prot
Match: C3H62_ORYSJ (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica GN=Os10g0391300 PE=3 SV=2) HSP 1 Score: 177.2 bits (448), Expect = 2.6e-43 Identity = 93/211 (44.08%), Postives = 135/211 (63.98%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TrEMBL
Match: A0A0A0LQ19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292810 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-118 Identity = 234/301 (77.74%), Postives = 251/301 (83.39%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TrEMBL
Match: A0A067KI05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12361 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83 Identity = 173/270 (64.07%), Postives = 211/270 (78.15%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TrEMBL
Match: M5VW90_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020917mg PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.9e-83 Identity = 172/280 (61.43%), Postives = 213/280 (76.07%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TrEMBL
Match: B9S8J5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0601710 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 2.1e-76 Identity = 161/268 (60.07%), Postives = 206/268 (76.87%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TrEMBL
Match: A0A061DGA8_THECC (SAP domain-containing protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000572 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75 Identity = 167/282 (59.22%), Postives = 206/282 (73.05%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. TAIR10
Match: AT5G66840.1 (AT5G66840.1 SAP domain-containing protein) HSP 1 Score: 246.9 bits (629), Expect = 1.5e-65 Identity = 141/278 (50.72%), Postives = 188/278 (67.63%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. NCBI nr
Match: gi|700206932|gb|KGN62051.1| (hypothetical protein Csa_2G292810 [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 1.9e-118 Identity = 234/301 (77.74%), Postives = 251/301 (83.39%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. NCBI nr
Match: gi|778670088|ref|XP_004148070.2| (PREDICTED: zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus]) HSP 1 Score: 427.9 bits (1099), Expect = 1.4e-116 Identity = 231/300 (77.00%), Postives = 249/300 (83.00%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. NCBI nr
Match: gi|659116032|ref|XP_008457863.1| (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucumis melo]) HSP 1 Score: 427.9 bits (1099), Expect = 1.4e-116 Identity = 236/307 (76.87%), Postives = 256/307 (83.39%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. NCBI nr
Match: gi|778670090|ref|XP_011649363.1| (PREDICTED: zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 8.3e-114 Identity = 229/300 (76.33%), Postives = 247/300 (82.33%), Query Frame = 1
BLAST of Cp4.1LG16g00400 vs. NCBI nr
Match: gi|659116034|ref|XP_008457865.1| (PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X2 [Cucumis melo]) HSP 1 Score: 366.7 bits (940), Expect = 3.7e-98 Identity = 213/309 (68.93%), Postives = 233/309 (75.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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