Cp4.1LG14g10100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g10100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cp4.1LG14 : 8474565 .. 8478810 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGCACAAGTGCAATTTTGATAAATGCATGGGTGGGTTATTAAAATTGCGAAATTTCCCCAAATTTTTGTATTTCTGTATTTCTCACCCAACCAAATCCCCAAACCCATCGTCTATCAGCTTCTTCCTGGTTTCAGAGCTGAAGCAGGCAGTGCTGCAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTGATTCCTCATGCCTCCTCTCTCGGCCTTCTCAATTCTCATGGAAAACCGTCAAATTTCCATCCAAAGCTCAAATCCAGTGTTTCTTTTCCTTCGGCTTCATCGGTTCTCAAAACAACCGCTCGTAAGCCCTCGAGAACCCTAGCTCCGTCCTGTTCTGTTCATATGACGGGTCCACAAACGCCGGATGCCGCTCAGAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCGGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGGTATTCACGAGGTGATTTTTTGTGCATAATGTAGTTGGTGAAGTATGGAATATGAAATTCGAGCTCATTTCTGTTCTTTCCAAACGATTTAGGTAATTTGATTTCTAGGAATATGCGATTTATGCCTAACTTTCATATGCTTTCCTTACCGCGCCGAATGCAAGAGTTAGCCTACGTTACTTGATCTCTGCATCTCGCAATTTCTATATAGTTTTCTTCATCTGCATCACAAACTTTTAGCCTACGAATGGGGGCATTCATTCCGGTGATGAATCACTGAAAATTTAGGACTCGTTGTAGATCAATGAAATTGGAATGGAAAATTATTTTTAATATATAGCGATACTCATGTTATGCACCTGCTATCAATAGAAATGCTTATGAACTATGAAAGTTATATAAACATCCAACATTGAAATTGTTTGTACATAAAAAAAACTTTAAATTAGAAAGAACCGTGCAAGAGTGTTAGTCTACCTTGTTACGTGGAACTTTGCTGGTCCTCTTATTTCTTTGGGTGGCTTGAGAATTTGAAATGTAAGGACTAGAAACACCGCCATCCTCTCAAAGTGGATGCTTGCTTGAAGAGAGTCCCCTTAGAAGAGACTTAATCGAGTAAATATGTGATTGGCAATCTTCGTGATACTTAGGTTCTAGAGTTGACATTGATAAAATATGAGATTTCTTTGATCAGTGTCCTTTTAAAGAATGGCAATGGTCGGAGGACATTAATGAAAGATGCCAATCTCCAGCTGAATAGTAAAGAAGGCTGGTTAGATAAACCCTTTTTTCTTTGGTTTGGAAGGAGAACTCTCAGTTCTTCCTTTGGGATATGACTTACAAGAGCCTAAACACTTGTGATTGGATTCAAAAGATGATCCCTTCCATGGCTTTATCTCCTTCGCTTACCCTGCATATCTAATGAAGGAATCCTGGACCATCTTTTTATTCAATTAACAACATGTTGCACAAAGGTTTACATGTGATTCTGTGATGAACCCCCCACCGTTCTGGATAGGAATCAATTTCACGGACTAAATGAAATGATACAAATAGGTAAACCCATCCGAAAAAGAACCATATTTTTGGACAACGATTCTCAATATATTCGGATGACATCTCACATTTACTAGGGAGGTAAAGGATATATTGGATATGGCCTTAACATACTCCCTTTCAAGAATGCAAAAGTCCTACTATGGAAAAATCTCATCATAGCTTTCTTTTGGAATTGTGGAAAGAAAGAAATCAGAGAATATTTGCAGAAAAGACACATACTTACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTGGGAAGGTCTTTTGTAAACACCATGGATATTACATCCCTTTTGTAAATTTCAATCATCAATGAAATTGTCTCTTATAAGAAAAAAAAAATCTAAAAAAATCTATAGAAAAAGAAAATGAACCATATTTTTACACCAATAAGGAGCTATGAAACAATAGGCTTTTAGGACTTCGAGTGGAGAGTTTCTTTGTCTTGAAAATCTTCGAGTCCAATTCATTCCAAATCTTCCAAATAACTGGCCTCACAATGAATGACCAAATGATATTCTCTGTCGACTTGATGGATGATCTGAGCCAATCAAGAACCCCATTTTATAAGGACCGATTTCCTAAATCAGTACTCCTTTGAGATAGGCGCTAAAACTCCTCCTAAGTGAGTAAGCATGTTGGCCAAACCAAGAATTGAATGTTTCTTTCTGAACTGCACTGGTGACATGTTGCCTCTTTGAGATTCTTTCTTCTTTGGAGAAGGGATATGCCTATTGGGCGACCACTGAGGAATTTAATGTGTTTGTGTCTATGTCTAGAGACAAGTGTACTCATCTACTCTATGTTTCTACATGAATGGGAAGATCGGCAAACCGTGGAAACATATTTGTATACATGGTTTGCATGGCCTATATGTACATATACATTAGGAAACCTTCTAGAGTAATTTAGTTTAGAATTCTGTGGCTTATGAATGACCTTTTCATGATCCTATCTTTGCATCTTTGATGTGCAACTACTTTCTAATGGTAAATCTATCATTAGGAAATCTCTCTTTTCTCGTGAGAGGCGTGCGCAGAAGAAATTATGTGCTCTGCCTAGCCCATTTGTCCGAAAAGGTTATGCTTAATAAGTTCCACATCTATTAATCCTCATTTTGATTAACGAACACACCTTTCTAACCTTGTCATAATCCAAACCCAGTCTCCCAGTTGTGTACCGAACAGATTCCTTTTCAGCCTAACGTCCCCCAAGTTCGGTCTTCTTTCAAGCAATCAAACCAGTAATCTTCCTAGATTGAGATCCTAAGCCCCTTCTCCATCGTATAAAGCAAACCATTTCGGACAAACCTGCACATTTAGCAAGAACAGGCCAGGGGCAGAAGGCAGACTAGATTACGTGGTTTCATTTGTTTTGTGAGTTCCAGGAATTTTAGAAGTAGGAGTGTCATATAATCATATTTATGAGTATATAAATTCTTGTCATTATTTATTTGAAGCTGGAAATATCGATTATTAGGCGTTTTTACTATATATGTTTGTTTTTCCCTCTTCTGTCTTGGAAATTTAGATCAGGAGGACGTTCGACTTTCGCTGAGTGGCACCTGATCTCATCCATTTTTGCATCATATTCTTTATCATTCTGAAAGTCGATAGTCTTCTTAGTTAATATTTCGTGTTTGGTTGTATTACATTACCCTTGCCTGATTCCCTTCTATTAATGTTGTTTTCATTAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTACCGGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGTAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAGTTTCAAGCGTTTCAATGTACCGTTTTCTAGGCTTTCGATTTATATATGATTCACTTGTAGAATCTTATGTGTGAGCAAAGTCATGGTAAGCGGAAACCAGAAATATGCTGGAACTTGCTGAGCTCATCACCTTCGTCTCTACTTACCAGAAGTTAAAAAGGTATTTTGGGAATTTGGACTCTTTTTCTATCTATGACATTATCAAATTAGCATTCTTGAGAAAGGAAAACTTGGCATTGAATCATATTTTGTATTGGCAGTGTATATTTGTTGATTGATTCATGAATATCGTCATTTTTTCAATCGTCATTCGGAGATACGGTGATTTAATCCTCTGATCTCTTGATCGAATAAATATGTCTTAACCAATTTAATT

mRNA sequence

TGGGGCACAAGTGCAATTTTGATAAATGCATGGGTGGGTTATTAAAATTGCGAAATTTCCCCAAATTTTTGTATTTCTGTATTTCTCACCCAACCAAATCCCCAAACCCATCGTCTATCAGCTTCTTCCTGGTTTCAGAGCTGAAGCAGGCAGTGCTGCAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTGATTCCTCATGCCTCCTCTCTCGGCCTTCTCAATTCTCATGGAAAACCGTCAAATTTCCATCCAAAGCTCAAATCCAGTGTTTCTTTTCCTTCGGCTTCATCGGTTCTCAAAACAACCGCTCGTAAGCCCTCGAGAACCCTAGCTCCGTCCTGTTCTGTTCATATGACGGGTCCACAAACGCCGGATGCCGCTCAGAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCGGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGTCCTTTTAAAGAATGGCAATGGTCGGAGGACATTAATGAAAGATGCCAATCTCCAGCTGAATAGTAAAGAAGGCTGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTACCGGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGTAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAGTTTCAAGCGTTTCAATGTACCGTTTTCTAGGCTTTCGATTTATATATGATTCACTTGTAGAATCTTATGTGTGAGCAAAGTCATGGTAAGCGGAAACCAGAAATATGCTGGAACTTGCTGAGCTCATCACCTTCGTCTCTACTTACCAGAAGTTAAAAAGGTATTTTGGGAATTTGGACTCTTTTTCTATCTATGACATTATCAAATTAGCATTCTTGAGAAAGGAAAACTTGGCATTGAATCATATTTTGTATTGGCAGTGTATATTTGTTGATTGATTCATGAATATCGTCATTTTTTCAATCGTCATTCGGAGATACGGTGATTTAATCCTCTGATCTCTTGATCGAATAAATATGTCTTAACCAATTTAATT

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCTACTCTGATTCCTCATGCCTCCTCTCTCGGCCTTCTCAATTCTCATGGAAAACCGTCAAATTTCCATCCAAAGCTCAAATCCAGTGTTTCTTTTCCTTCGGCTTCATCGGTTCTCAAAACAACCGCTCGTAAGCCCTCGAGAACCCTAGCTCCGTCCTGTTCTGTTCATATGACGGGTCCACAAACGCCGGATGCCGCTCAGAGAGGCGCCGAGACTGACGCCATGGGACTGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCGGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGTCCTTTTAAAGAATGGCAATGGTCGGAGGACATTAATGAAAGATGCCAATCTCCAGCTGAATAGTAAAGAAGGCTGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTACCGGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGTAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAG

Protein sequence

MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY

Homology

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BLAST of Cp4.1LG14g10100 vs. Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.3e-96
Identity = 208/327 (63.61%), Postives = 238/327 (72.78%), Query Frame = 1


Query: 1   MELLSRCSTLIP-------HASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP 60
           M  LS  S+L P       ++SS    +S  KP+N + K    +S P     L+TT+  P
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPP-----LRTTSPSP 60

Query: 61  SRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLL 120
            R    + S+ M+  QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLL
Sbjct: 61  LRFA--NASIEMS--QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLL 120

Query: 121 DAQDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVR 180
           DA+D  KDI+LFINS GGSLS                          ATMAIYDVVQLVR
Sbjct: 121 DAKDPKKDIKLFINSPGGSLS--------------------------ATMAIYDVVQLVR 180

Query: 181 ADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMH 240
           ADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MH
Sbjct: 181 ADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMH 240

Query: 241 NKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERV 300
           NKNN+T II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RV
Sbjct: 241 NKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRV 292

Query: 301 KASLNYIEISKDPKKFLSPDVPDDEIY 321
           K  +NY EISKDP KFL+P++PDDEIY
Sbjct: 301 KPRVNYEEISKDPMKFLTPEIPDDEIY 292

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BLAST of Cp4.1LG14g10100 vs. Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 9.3e-50
Identity = 104/213 (48.83%), Postives = 141/213 (66.20%), Query Frame = 1


Query: 68  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 69

Query: 128 NSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAAS 187
           NS GGS++                          A +AIYD +Q V  DV TI  G+AAS
Sbjct: 70  NSPGGSVT--------------------------AGLAIYDTMQQVAPDVVTICYGLAAS 129

Query: 188 TASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 247
             + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E T
Sbjct: 130 MGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHT 189

Query: 248 GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 280
           G P +K+ +D DRD ++SP EAVEYGLID V+D
Sbjct: 190 GQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196

[Close]

BLAST of Cp4.1LG14g10100 vs. Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-49
Identity = 103/213 (48.36%), Postives = 140/213 (65.73%), Query Frame = 1


Query: 68  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYV 69

Query: 128 NSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAAS 187
           NS GGS++                          A +AIYD +Q V  DV TI  G+AAS
Sbjct: 70  NSPGGSVT--------------------------AGLAIYDTMQQVAPDVVTICYGLAAS 129

Query: 188 TASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 247
             + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E T
Sbjct: 130 MGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHT 189

Query: 248 GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 280
           G P +K+ +D DRD ++SP EAVEYGLID V+D
Sbjct: 190 GQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196

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BLAST of Cp4.1LG14g10100 vs. Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-48
Identity = 103/213 (48.36%), Postives = 139/213 (65.26%), Query Frame = 1


Query: 68  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 128 NSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAAS 187
           NS GGS++                          A +AIYD +Q V  DV TI  G+AAS
Sbjct: 87  NSPGGSVT--------------------------AGLAIYDTMQQVAPDVVTICYGLAAS 146

Query: 188 TASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 247
             + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E T
Sbjct: 147 MGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHT 206

Query: 248 GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 280
           G P  K+ +D DRD ++SP +AVEYGLID V+D
Sbjct: 207 GQPLNKIAEDTDRDHFLSPAKAVEYGLIDRVVD 213

[Close]

BLAST of Cp4.1LG14g10100 vs. Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.3e-48
Identity = 103/217 (47.47%), Postives = 143/217 (65.90%), Query Frame = 1


Query: 68  PQTPDAAQRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+I
Sbjct: 39  PTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYI 98

Query: 128 NSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAAS 187
           NS GGS++                          A MAIYD +Q V  DV+TI  G+AAS
Sbjct: 99  NSPGGSVT--------------------------AGMAIYDTMQQVAPDVATICFGLAAS 158

Query: 188 TASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFT 247
             + +L GG +GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+ +  ++++ T
Sbjct: 159 MGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHT 218

Query: 248 GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSI 284
           G P EK++ D DRD +MSP EA  YGLID V+ + ++
Sbjct: 219 GQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRPTM 229

[Close]

BLAST of Cp4.1LG14g10100 vs. TrEMBL
Match: A0A0A0L3S1_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-133
Identity = 260/320 (81.25%), Postives = 276/320 (86.25%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPS 60
           MELLSRCSTL PHASSLGL NSHGKPSNF PKLKS++SFPSASSVLKTTA KPSRTL P 
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIA 180
           DIRLFINS+GGSLS                          +TMAIYDVVQLVRADVSTIA
Sbjct: 121 DIRLFINSAGGSLS--------------------------STMAIYDVVQLVRADVSTIA 180

Query: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITR 240
           LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEIQAREIM NK+N+ R
Sbjct: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIR 240

Query: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYI 300
           IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+DSIIPL+PVP++VK   NY 
Sbjct: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYT 293

Query: 301 EISKDPKKFLSPDVPDDEIY 321
           E+ KDP KFL+PDVPDDEI+
Sbjct: 301 EVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of Cp4.1LG14g10100 vs. TrEMBL
Match: A0A061G8D9_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_016742 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.2e-106
Identity = 229/325 (70.46%), Postives = 247/325 (76.00%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSS----VSFPSASSV-LKTTARKPSR 60
           M+LLS  S L P  SSL L   H K S   P  K S       P +SSV +KTT      
Sbjct: 1   MDLLSLSSPLTPSLSSLQLKLKH-KTSFTSPNPKPSFLCLTPTPVSSSVKVKTT------ 60

Query: 61  TLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA 120
              P C + ++ PQ+P  A RGAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDA
Sbjct: 61  ---PKC-LQLSAPQSPATAMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDA 120

Query: 121 QDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRAD 180
           QD  KDIRLFINS GGSLS                          ATMAIYDVVQLVRAD
Sbjct: 121 QDPNKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRAD 180

Query: 181 VSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNK 240
           VST+ALGIAASTASIILGGGTKGKRLAMPN RIM+HQPLGGASGQAIDVEIQA+EIMHNK
Sbjct: 181 VSTVALGIAASTASIILGGGTKGKRLAMPNTRIMIHQPLGGASGQAIDVEIQAQEIMHNK 240

Query: 241 NNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKA 300
           NN+TRIIS FTG  FE+VQKDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVPERVKA
Sbjct: 241 NNVTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLAPVPERVKA 288

Query: 301 SLNYIEISKDPKKFLSPDVPDDEIY 321
           SLNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 SLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cp4.1LG14g10100 vs. TrEMBL
Match: A0A0D2R6I8_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_004G175000 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 8.4e-106
Identity = 224/324 (69.14%), Postives = 244/324 (75.31%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP---SRTL 60
           M LLS  S+L P  SSL L           PK K S++FP+ S V       P   S  L
Sbjct: 1   MGLLSLSSSLTPSFSSLHL----------KPKHKLSLTFPNPSFVCSAPTSTPLSSSLKL 60

Query: 61  APSC-SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQ 120
            P+  S+ ++ PQ+P  A RGAE DAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADV 180
           D TKDIRLFINS GGSLS                          ATMAIYDVVQLVRADV
Sbjct: 121 DPTKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRADV 180

Query: 181 STIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 240
           ST+ +GIAASTASIILGGGTKGKR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKN
Sbjct: 181 STVGIGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKN 240

Query: 241 NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKAS 300
           N+TRIIS  TG PFE+V KDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVPERVKAS
Sbjct: 241 NVTRIISASTGRPFEQVLKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKAS 288

Query: 301 LNYIEISKDPKKFLSPDVPDDEIY 321
           LNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 LNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cp4.1LG14g10100 vs. TrEMBL
Match: A0A0B0PZ48_GOSAR (ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_15783 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.1e-104
Identity = 221/324 (68.21%), Postives = 241/324 (74.38%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP---SRTL 60
           M LLS  S+L P   SL L           PK K S++FP+ S        KP   S  L
Sbjct: 1   MGLLSLSSSLTPSFPSLHL----------KPKHKLSLTFPNPSFACSAPTSKPLSSSLKL 60

Query: 61  APSC-SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQ 120
            P+  S+  + PQ+P  A RGAE DAMGLLLRERIVFLGN+IDDF ADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKFSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFAADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADV 180
           D TKDIRLFINS GGSLS                          ATMAIYDVVQLVRADV
Sbjct: 121 DPTKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRADV 180

Query: 181 STIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 240
           ST+ +GIAASTASIILGGGTKGKR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKN
Sbjct: 181 STVGIGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKN 240

Query: 241 NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKAS 300
           N+TRIIS  TG PFE+V KDIDRDRYMSPIEA+EYG+IDGVID+DSIIPL PVPERVKAS
Sbjct: 241 NVTRIISASTGRPFEQVLKDIDRDRYMSPIEALEYGIIDGVIDRDSIIPLEPVPERVKAS 288

Query: 301 LNYIEISKDPKKFLSPDVPDDEIY 321
           LNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 LNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cp4.1LG14g10100 vs. TrEMBL
Match: W9RI69_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_025970 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 217/324 (66.98%), Postives = 246/324 (75.93%), Query Frame = 1


Query: 1   MELLSRCSTL----IPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRT 60
           M++LS  S +    +P++S    ++SH   S+   K  SS     A     T++ KP   
Sbjct: 1   MDVLSLSSPIPSFKLPNSSRPKPISSHLPISSLKTKRASSF----AKCFQSTSSSKPQSL 60

Query: 61  LAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQ 120
           L PS  +  + PQTPD A R AE+DAMGLLLRERIVFLG+SIDDF+ADAIISQLLLLDAQ
Sbjct: 61  LTPSLLL-ASSPQTPDTAMRSAESDAMGLLLRERIVFLGSSIDDFIADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADV 180
           DSTKDI+LFINS+GGSLS                          ATMAIYDVVQLVRADV
Sbjct: 121 DSTKDIKLFINSTGGSLS--------------------------ATMAIYDVVQLVRADV 180

Query: 181 STIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 240
           ST+ALGIAASTAS+ILGGGTKGKR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKN
Sbjct: 181 STVALGIAASTASVILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKN 240

Query: 241 NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKAS 300
           N+T II+  TG  FE+VQKDIDRDRYMSPIEAVEYGL+DGVID+DSIIPLVPVPERVKA 
Sbjct: 241 NVTSIIAHCTGRTFEQVQKDIDRDRYMSPIEAVEYGLLDGVIDRDSIIPLVPVPERVKAR 293

Query: 301 LNYIEISKDPKKFLSPDVPDDEIY 321
           + Y EISKDP+KFL+PDVPDDEIY
Sbjct: 301 ITYEEISKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Cp4.1LG14g10100 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97
Identity = 208/327 (63.61%), Postives = 238/327 (72.78%), Query Frame = 1


Query: 1   MELLSRCSTLIP-------HASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP 60
           M  LS  S+L P       ++SS    +S  KP+N + K    +S P     L+TT+  P
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPP-----LRTTSPSP 60

Query: 61  SRTLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLL 120
            R    + S+ M+  QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLL
Sbjct: 61  LRFA--NASIEMS--QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLL 120

Query: 121 DAQDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVR 180
           DA+D  KDI+LFINS GGSLS                          ATMAIYDVVQLVR
Sbjct: 121 DAKDPKKDIKLFINSPGGSLS--------------------------ATMAIYDVVQLVR 180

Query: 181 ADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMH 240
           ADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MH
Sbjct: 181 ADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMH 240

Query: 241 NKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERV 300
           NKNN+T II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID DSIIPL PVP+RV
Sbjct: 241 NKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRV 292

Query: 301 KASLNYIEISKDPKKFLSPDVPDDEIY 321
           K  +NY EISKDP KFL+P++PDDEIY
Sbjct: 301 KPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Cp4.1LG14g10100 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-47
Identity = 114/269 (42.38%), Postives = 159/269 (59.11%), Query Frame = 1


Query: 19  LLNSHGKPSNF----HPKLKSSVSFPSASSVLKTTARKPSRTLAPSCSVHMTG----PQT 78
           LLN  GK  NF    H   K+S  F   SS+  + ++ P +TL+ +  V         Q+
Sbjct: 18  LLNP-GKNLNFPIRNHRIPKTSKPFCVRSSM--SLSKPPRQTLSSNWDVSSFSIDSVAQS 77

Query: 79  PDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSG 138
           P       E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFINS G
Sbjct: 78  PSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPG 137

Query: 139 GSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAASTASI 198
           GS++                          A M IYD ++  +ADVST+ LG+AAS  + 
Sbjct: 138 GSIT--------------------------AGMGIYDAMKQCKADVSTVCLGLAASMGAF 197

Query: 199 ILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPF 258
           +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M++K  + +I S  TG P 
Sbjct: 198 LLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPE 257

Query: 259 EKVQKDIDRDRYMSPIEAVEYGLIDGVID 280
            +++ D DRD +++P EA EYGLID VID
Sbjct: 258 SEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]

BLAST of Cp4.1LG14g10100 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-41
Identity = 87/193 (45.08%), Postives = 124/193 (64.25%), Query Frame = 1


Query: 86  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSVLLKNGNGRRT 145
           L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++           
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVT----------- 178

Query: 146 LMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPN 205
                          A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN
Sbjct: 179 ---------------AGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 238

Query: 206 ARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP 265
           +RIM+HQPLGGA G   D++IQA E++H+K N+   ++  TG   EK+ +D DRD +MS 
Sbjct: 239 SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSA 285

Query: 266 IEAVEYGLIDGVI 279
            EA EYGLIDGVI
Sbjct: 299 KEAKEYGLIDGVI 285

[Close]

BLAST of Cp4.1LG14g10100 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 142.1 bits (357), Expect = 5.8e-34
Identity = 89/271 (32.84%), Postives = 133/271 (49.08%), Query Frame = 1


Query: 27  SNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPSCSVHMTG----------------PQT 86
           S +   LK+ +S   + S +K   + PS    P  ++  +                 P  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPPVM 103

Query: 87  PDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSG 146
           P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N  G
Sbjct: 104 PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 163

Query: 147 GSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIALGIAASTASI 206
           GS   +L                          AIYD +  ++  V T+A G+AAS  ++
Sbjct: 164 GSTYSVL--------------------------AIYDCMSWIKPKVGTVAFGVAASQGAL 223

Query: 207 ILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPF 266
           +L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ + FTG P 
Sbjct: 224 LLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPL 283

Query: 267 EKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD 282
           EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Sbjct: 284 EKVQQYTERDRFLSASEALEFGLIDGLLETE 288

[Close]

BLAST of Cp4.1LG14g10100 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33
Identity = 80/241 (33.20%), Postives = 135/241 (56.02%), Query Frame = 1


Query: 41  SASSVLKTTARKPSRTLAPSCSVHMTGPQTPDAAQRGAET-DAMGLLLRERIVFLGNSID 100
           S + +L +T    + ++A     +   P   + + RG    D    LL+ERI+ +   I+
Sbjct: 7   SGAKMLSSTPSSMATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIN 66

Query: 101 DFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEG 160
           D  +  +++QLL L++++ +K I +++NS GG ++                         
Sbjct: 67  DDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVT------------------------- 126

Query: 161 CATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG 220
            A +AIYD +Q +R+ +STI LG AAS AS++L  G KG+R ++PNA +M+HQP GG SG
Sbjct: 127 -AGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSG 186

Query: 221 QAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 280
           QA D+ I  ++I+   + +  +  + TG P + V  ++DRD +M+P EA  +G+ID VID
Sbjct: 187 QAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVID 221

[Close]

BLAST of Cp4.1LG14g10100 vs. NCBI nr
Match: gi|659095454|ref|XP_008448589.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 2.6e-140
Identity = 274/320 (85.62%), Postives = 285/320 (89.06%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPS 60
           MELLSRCSTLIP ASSLGL NSHGKPSNF PKLKS++SFPSASSVLKTTA KPSRTL P 
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDA++RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIA 180
           DIRLFINS+GGSLS                          ATMAIYDVVQLVRADVSTIA
Sbjct: 121 DIRLFINSAGGSLS--------------------------ATMAIYDVVQLVRADVSTIA 180

Query: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITR 240
           LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TR
Sbjct: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTR 240

Query: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYI 300
           IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+DSIIPLVPVPERVKA+LNY 
Sbjct: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYE 293

Query: 301 EISKDPKKFLSPDVPDDEIY 321
           E+SKDP+KFL+PDVPDDEIY
Sbjct: 301 EMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Cp4.1LG14g10100 vs. NCBI nr
Match: gi|449456777|ref|XP_004146125.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 483.8 bits (1244), Expect = 2.3e-133
Identity = 260/320 (81.25%), Postives = 276/320 (86.25%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPS 60
           MELLSRCSTL PHASSLGL NSHGKPSNF PKLKS++SFPSASSVLKTTA KPSRTL P 
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADVSTIA 180
           DIRLFINS+GGSLS                          +TMAIYDVVQLVRADVSTIA
Sbjct: 121 DIRLFINSAGGSLS--------------------------STMAIYDVVQLVRADVSTIA 180

Query: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITR 240
           LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG A+DVEIQAREIM NK+N+ R
Sbjct: 181 LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIR 240

Query: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYI 300
           IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG IDGVID+DSIIPL+PVP++VK   NY 
Sbjct: 241 IISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYT 293

Query: 301 EISKDPKKFLSPDVPDDEIY 321
           E+ KDP KFL+PDVPDDEI+
Sbjct: 301 EVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of Cp4.1LG14g10100 vs. NCBI nr
Match: gi|590680694|ref|XP_007040931.1| (ATP-dependent Clp protease proteolytic subunit 4 [Theobroma cacao])

HSP 1 Score: 393.7 bits (1010), Expect = 3.2e-106
Identity = 229/325 (70.46%), Postives = 247/325 (76.00%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSS----VSFPSASSV-LKTTARKPSR 60
           M+LLS  S L P  SSL L   H K S   P  K S       P +SSV +KTT      
Sbjct: 1   MDLLSLSSPLTPSLSSLQLKLKH-KTSFTSPNPKPSFLCLTPTPVSSSVKVKTT------ 60

Query: 61  TLAPSCSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA 120
              P C + ++ PQ+P  A RGAETDAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDA
Sbjct: 61  ---PKC-LQLSAPQSPATAMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDA 120

Query: 121 QDSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRAD 180
           QD  KDIRLFINS GGSLS                          ATMAIYDVVQLVRAD
Sbjct: 121 QDPNKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRAD 180

Query: 181 VSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNK 240
           VST+ALGIAASTASIILGGGTKGKRLAMPN RIM+HQPLGGASGQAIDVEIQA+EIMHNK
Sbjct: 181 VSTVALGIAASTASIILGGGTKGKRLAMPNTRIMIHQPLGGASGQAIDVEIQAQEIMHNK 240

Query: 241 NNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKA 300
           NN+TRIIS FTG  FE+VQKDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVPERVKA
Sbjct: 241 NNVTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLAPVPERVKA 288

Query: 301 SLNYIEISKDPKKFLSPDVPDDEIY 321
           SLNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 SLNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cp4.1LG14g10100 vs. NCBI nr
Match: gi|823151327|ref|XP_012475491.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Gossypium raimondii])

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-105
Identity = 224/324 (69.14%), Postives = 244/324 (75.31%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP---SRTL 60
           M LLS  S+L P  SSL L           PK K S++FP+ S V       P   S  L
Sbjct: 1   MGLLSLSSSLTPSFSSLHL----------KPKHKLSLTFPNPSFVCSAPTSTPLSSSLKL 60

Query: 61  APSC-SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQ 120
            P+  S+ ++ PQ+P  A RGAE DAMGLLLRERIVFLGN+IDDFVADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKLSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADV 180
           D TKDIRLFINS GGSLS                          ATMAIYDVVQLVRADV
Sbjct: 121 DPTKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRADV 180

Query: 181 STIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 240
           ST+ +GIAASTASIILGGGTKGKR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKN
Sbjct: 181 STVGIGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKN 240

Query: 241 NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKAS 300
           N+TRIIS  TG PFE+V KDIDRDRYMSPIEAVEYG+IDGVID+DSIIPL PVPERVKAS
Sbjct: 241 NVTRIISASTGRPFEQVLKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLEPVPERVKAS 288

Query: 301 LNYIEISKDPKKFLSPDVPDDEIY 321
           LNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 LNYEEISKDPRKFLTPDIPDDEIY 288

[Close]

BLAST of Cp4.1LG14g10100 vs. NCBI nr
Match: gi|728849303|gb|KHG28746.1| (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic -like protein [Gossypium arboreum])

HSP 1 Score: 387.1 bits (993), Expect = 3.0e-104
Identity = 221/324 (68.21%), Postives = 241/324 (74.38%), Query Frame = 1


Query: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKP---SRTL 60
           M LLS  S+L P   SL L           PK K S++FP+ S        KP   S  L
Sbjct: 1   MGLLSLSSSLTPSFPSLHL----------KPKHKLSLTFPNPSFACSAPTSKPLSSSLKL 60

Query: 61  APSC-SVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQ 120
            P+  S+  + PQ+P  A RGAE DAMGLLLRERIVFLGN+IDDF ADAIISQLLLLDAQ
Sbjct: 61  KPTANSLKFSAPQSPATAMRGAEADAMGLLLRERIVFLGNNIDDFAADAIISQLLLLDAQ 120

Query: 121 DSTKDIRLFINSSGGSLSVLLKNGNGRRTLMKDANLQLNSKEGCATMAIYDVVQLVRADV 180
           D TKDIRLFINS GGSLS                          ATMAIYDVVQLVRADV
Sbjct: 121 DPTKDIRLFINSPGGSLS--------------------------ATMAIYDVVQLVRADV 180

Query: 181 STIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKN 240
           ST+ +GIAASTASIILGGGTKGKR AMPN RIM+HQPLGGASGQAIDVEIQAREIMHNKN
Sbjct: 181 STVGIGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREIMHNKN 240

Query: 241 NITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKAS 300
           N+TRIIS  TG PFE+V KDIDRDRYMSPIEA+EYG+IDGVID+DSIIPL PVPERVKAS
Sbjct: 241 NVTRIISASTGRPFEQVLKDIDRDRYMSPIEALEYGIIDGVIDRDSIIPLEPVPERVKAS 288

Query: 301 LNYIEISKDPKKFLSPDVPDDEIY 321
           LNY EISKDP+KFL+PD+PDDEIY
Sbjct: 301 LNYEEISKDPRKFLTPDIPDDEIY 288

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g10100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLPP4_ARATH	2.3e-96	63.61	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
CLPP1_SYNSC	9.3e-50	48.83	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
CLPP2_SYNS9	2.1e-49	48.36	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
CLPP1_PROMM	1.3e-48	48.36	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
CLPP2_SYNE7	2.3e-48	47.47	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]

BLAST of Cp4.1LG14g10100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S1_CUCSA	1.6e-133	81.25	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G00504...	[more]
A0A061G8D9_THECC	2.2e-106	70.46	ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_016742 ...	[more]
A0A0D2R6I8_GOSRA	8.4e-106	69.14	ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_00...	[more]
A0A0B0PZ48_GOSAR	2.1e-104	68.21	ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_157...	[more]
W9RI69_9ROSA	2.3e-103	66.98	ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_025970...	[more]

BLAST of Cp4.1LG14g10100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45390.1	1.3e-97	63.61	CLP protease P4	[more]
AT1G66670.1	6.0e-47	42.38	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	4.9e-41	45.08	nuclear encoded CLP protease 5	[more]
AT1G11750.2	5.8e-34	32.84	CLP protease proteolytic subunit 6	[more]
AT5G23140.1	2.2e-33	33.20	nuclear-encoded CLP protease P7	[more]

BLAST of Cp4.1LG14g10100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095454\|ref\|XP_008448589.1\|	2.6e-140	85.63	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
gi\|449456777\|ref\|XP_004146125.1\|	2.3e-133	81.25	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
gi\|590680694\|ref\|XP_007040931.1\|	3.2e-106	70.46	ATP-dependent Clp protease proteolytic subunit 4 [Theobroma cacao]	[more]
gi\|823151327\|ref\|XP_012475491.1\|	1.2e-105	69.14	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Goss...	[more]
gi\|728849303\|gb\|KHG28746.1\|	3.0e-104	68.21	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic -like protein [G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023562	ClpP/TepA
IPR001907	ClpP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006508	proteolysis
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g10100.1	Cp4.1LG14g10100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 256..275 score: 1.4E-30coord: 178..195 score: 1.4E-30coord: 81..96 score: 1.4E-30coord: 199..218 score: 1.4
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 66..281 score: 34
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 26..130 score: 6.0E-145coord: 157..320 score: 6.0E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 148..280 score: 3.2E-49coord: 80..134 score: 1.1
None	No IPR available	PANTHER	PTHR10381:SF24	SUBFAMILY NOT NAMED	coord: 26..130 score: 6.0E-145coord: 157..320 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g10100	Cucsa.322370	Cucumber (Gy14) v1	cgycpeB0845
Cp4.1LG14g10100	CmaCh16G012180	Cucurbita maxima (Rimu)	cmacpeB345
Cp4.1LG14g10100	CmoCh16G012620	Cucurbita moschata (Rifu)	cmocpeB308
Cp4.1LG14g10100	CmoCh06G006060	Cucurbita moschata (Rifu)	cmocpeB771
Cp4.1LG14g10100	Cla008866	Watermelon (97103) v1	cpewmB202
Cp4.1LG14g10100	Csa3G005040	Cucumber (Chinese Long) v2	cpecuB212
Cp4.1LG14g10100	MELO3C013793	Melon (DHL92) v3.5.1	cpemeB184
Cp4.1LG14g10100	ClCG10G001000	Watermelon (Charleston Gray)	cpewcgB193
Cp4.1LG14g10100	CSPI03G01000	Wild cucumber (PI 183967)	cpecpiB215
Cp4.1LG14g10100	Lsi07G011300	Bottle gourd (USVL1VR-Ls)	cpelsiB183
Cp4.1LG14g10100	MELO3C013793.2	Melon (DHL92) v3.6.1	cpemedB231
Cp4.1LG14g10100	CsaV3_3G001040	Cucumber (Chinese Long) v3	cpecucB0255
Cp4.1LG14g10100	BhiUN179G3	Wax gourd	cpewgoB0308
Cp4.1LG14g10100	CsGy3G000950	Cucumber (Gy14) v2	cgybcpeB325
Cp4.1LG14g10100	Carg23564	Silver-seed gourd	carcpeB1461
Cp4.1LG14g10100	Carg16286	Silver-seed gourd	carcpeB0955

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g10100	Cp4.1LG08g09080	Cucurbita pepo (Zucchini)	cpecpeB249

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g10100	Cucurbita maxima (Rimu)	cmacpeB817