Cp4.1LG08g08270 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCCATGAATGCCTTCCATCCTTCTCCATTGCTTTTCATACTCTTTCTTCTCATGCTCTTCCAAACATGCATCATTGCCACCAGGAAGGTAAACAATCTCTTCGTTCTATCATTATCGTTCGATTCTCGTTTGGAATACTCACTTTTTGATTCATCGGGTTTTCTTTTTTTACTCGTCTAGCCTTACATTGTGTATCTGGGATCACTTTCTCATGGTTCGAGTACCTCTTCGTTGCATCATCAACGTGTAACAGAGTCTCATTATAGTTTATTGAAATCAGTGTCGGGAAGGTAATCATCTCTAACATTCTAAAGATAATTTAACGTTGTTTTAGCTAATTATTTATATCGTTGTTCATGTAGCAAGAACATAGCGGAAGAAGCAATTTCTCACTCATACAATAGACACATCAATGGCTTTGCTGCCATGCTTGATGAAAACCAAGCATCGGAACTTGCAAGTAAATTGTTCATACATTTCTAAACTAAGTCAATATGTTTTCCTTGTTCAAAGAAAGAAACTCAAAGCTGATGTTTTTAAAAAACGTGGCAGAATTTTCAGATGTCGTTTCAGTTTTTGAATGTCAAGCAAGAACATTGCACACGACAAGATCATGGAACTTTCTCGGAATGGAAAAACATGAAGGAATTCCTT AGCCATGAATGCCTTCCATCCTTCTCCATTGCTTTTCATACTCTTTCTTCTCATGCTCTTCCAAACATGCATCATTGCCACCAGGAAGGTAAACAATCTCTTCGTTCTATCATTATCGTTCGATTCTCGTTTGGAATACTCACTTTTTGATTCATCGGGTTTTCTTTTTTTACTCCCTTACATTGTGTATCTGGGATCACTTTCTCATGGTTCGAGTACCTCTTCGTTGCATCATCAACGTGTAACAGAGTCTCATTATAGTTTATTGAAATCAGTGTCGGGAAGCAAGAACATAGCGGAAGAAGCAATTTCTCACTCATACAATAGACACATCAATGGCTTTGCTGCCATGCTTGATGAAAACCAAGCATCGGAACTTGCAAAAAGAAACTCAAAGCTGATGTTTTTAAAAAACGTGGCAGAATTTTCAGATGTCTTTTTGAATGTCAAGCAAGAACATTGCACACGACAAGATCATGGAACTTTCTCGGAATGGAAAAACATGAAGGAATTCCTT ATGAATGCCTTCCATCCTTCTCCATTGCTTTTCATACTCTTTCTTCTCATGCTCTTCCAAACATGCATCATTGCCACCAGGAAGGTAAACAATCTCTTCGTTCTATCATTATCGTTCGATTCTCGTTTGGAATACTCACTTTTTGATTCATCGGGTTTTCTTTTTTTACTCCCTTACATTGTGTATCTGGGATCACTTTCTCATGGTTCGAGTACCTCTTCGTTGCATCATCAACGTGTAACAGAGTCTCATTATAGTTTATTGAAATCAGTGTCGGGAAGCAAGAACATAGCGGAAGAAGCAATTTCTCACTCATACAATAGACACATCAATGGCTTTGCTGCCATGCTTGATGAAAACCAAGCATCGGAACTTGCAAAAAGAAACTCAAAGCTGATGTTTTTAAAAAACGTGGCAGAATTTTCAGATGTCTTTTTGAATGTCAAGCAAGAACATTGCACACGACAAGATCATGGAACTTTCTCGGAATGGAAAAACATGAAGGAATTCCTT MNAFHPSPLLFILFLLMLFQTCIIATRKVNNLFVLSLSFDSRLEYSLFDSSGFLFLLPYIVYLGSLSHGSSTSSLHHQRVTESHYSLLKSVSGSKNIAEEAISHSYNRHINGFAAMLDENQASELAKRNSKLMFLKNVAEFSDVFLNVKQEHCTRQDHGTFSEWKNMKEFL
BLAST of Cp4.1LG08g08270 vs. Swiss-Prot
Match: SBT1_SOYBN (Subtilisin-like protease Glyma18g48580 OS=Glycine max GN=Glyma18g48580 PE=1 SV=3) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-14 Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. Swiss-Prot
Match: SBT54_ARATH (Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana GN=SBT5.4 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13 Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. Swiss-Prot
Match: AIR3_ARATH (Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TrEMBL
Match: A0A0S3RSA8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G059900 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.0e-13 Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TrEMBL
Match: A0A0S3RS57_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G059800 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TrEMBL
Match: A0A068UCD0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021539001 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 53/111 (47.75%), Postives = 67/111 (60.36%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TrEMBL
Match: A0A0S3RSB5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G059600 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TrEMBL
Match: A0A059BWW1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03664 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.4e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TAIR10
Match: AT5G59810.1 (AT5G59810.1 Subtilase family protein) HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15 Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TAIR10
Match: AT2G04160.1 (AT2G04160.1 Subtilisin-like serine endopeptidase family protein) HSP 1 Score: 61.2 bits (147), Expect = 7.0e-10 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TAIR10
Match: AT5G11940.1 (AT5G11940.1 Subtilase family protein) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 31/95 (32.63%), Postives = 53/95 (55.79%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TAIR10
Match: AT4G10520.1 (AT4G10520.1 Subtilase family protein) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. TAIR10
Match: AT4G10530.1 (AT4G10530.1 Subtilase family protein) HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06 Identity = 33/105 (31.43%), Postives = 56/105 (53.33%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. NCBI nr
Match: gi|1009107494|ref|XP_015880015.1| (PREDICTED: subtilisin-like protease SBT5.4 [Ziziphus jujuba]) HSP 1 Score: 85.9 bits (211), Expect = 7.5e-14 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. NCBI nr
Match: gi|965668844|dbj|BAT83451.1| (hypothetical protein VIGAN_04059900 [Vigna angularis var. angularis]) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-13 Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. NCBI nr
Match: gi|661890649|emb|CDP06146.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-13 Identity = 53/111 (47.75%), Postives = 67/111 (60.36%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. NCBI nr
Match: gi|965668843|dbj|BAT83450.1| (hypothetical protein VIGAN_04059800 [Vigna angularis var. angularis]) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-13 Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 1
BLAST of Cp4.1LG08g08270 vs. NCBI nr
Match: gi|965668841|dbj|BAT83448.1| (hypothetical protein VIGAN_04059600 [Vigna angularis var. angularis]) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-13 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |