Cp4.1LG08g06940 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g06940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DVA-1 polyprotein
Location	Cp4.1LG08 : 5344984 .. 5347904 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCAGTATAGTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCTAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTCGCACAAAACGCAGGTTCATCTGAGACTCTCTCAATTTCTTTTTTTCCCTCTCTCGCTGTTTTTCGATTTCTTCTGAATTCATATGGAGGTCTTCTTTTTCTTTGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGGTAACTTTATTGTTGATTTTCTTCGTTTTAGCATATATTGAATGATAGGTATTAGTAAGATTATTTGTTTATTAACTAATTTTTTCCTTGAATCAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGGTACATACTTTTAGATTCATTTGTTTACTTTTAGATTCATTTGTTTACGTTGAAGACTATTGGGAGGGAGTTGAAGACTATTGGGAGGGAGTCCACATTGGCTAATTTAGGGAATGATCATGAGTTTATAGGTAAGGAATACATCTCCATTGGTATAAGGCCTTTTGGGGAGGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGGGACTAGTTATTCCTAACCATTCGAAACCTGGACACGAGCTTAGCATTTTTAGTGCATTGACTTTTTGATATGAACCAAGAGACATCATTCATACAATATACTTCAATGAAGATGTGAAGAAGAAAATGTTGTCAAAATTATCAAAAGAGGTTGCAATTCATCTCACATTAATGAAGTTTGATGGTTATAAATTTTGGGTGGGTTACAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGACATTTTATTTACATCTTCATAATATTGTATGAATGATGTCTCTTGGTTCATATCACTTTTAGCAGGCTAAATGCTGCTAAATGCAGACATGGATATGTTATTCTCTGTCAAGAAAAAGGTGTCCTGGAAATTTAGCATCCACCCATTAAATCCTTGTTTCAACAGTCGTCCCTAGTTTGTGTTTAATTTCGTCTAGATTGTAAAGTCTATGAAAGATTAGGTTAGTCAAAGAGTACAATTTTTTACCAAGGATCCTCTTCCCAAAAGATGGTTATGAAATTTATTGTAAAATAAGAAATGTGCTTGTTGCAAGATCTATGGAGGGACATCTGTGCCTGATGGATGGATGGTAATTACTCACTAGTTGGTACCCAATCTTGGTTGTCTCGTAGGCTGGAAATATATTGGTTTTATAGTGCAAAAGTTGTTAACATTGATGAAATGGATTTTGAGTTGCACGTTTAAAAGAATGTAGCAATATAATGTAGTTGGGTGTAACATAGAGTGGTTGGAGAATTACTGACTATGTAACATTGTAGCATTGTTACTAAATATTTCTAACTTATAGCATTATTATGAGATGAAATGTAGAGATTGTTTGTAGCACTGTTTCGAACAATTTAACACCATGCACTTCAGCTGGGAACTTACCTCCCCCTTTTATGTCATTTGAAGTAGGCAAATTACTTCCTGACTACTACATTTAGAACATAGAACATGTCTGCATTATATTTGAATATGTTACAGTGCTTGTTCCTTCTTTGGAGTTGCAAGCGTTGCTCACTTCCTTCACTTGTTGCAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGTTTGCATGTTGACCAATTACCACCTAAATTTGAATCTGAACACAAACAACTTTAGTAGTTCTTGACCTATACATTCTTGTTAATTGTCATAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGTAAGTCACTCTTCCTTGTAATTACGTGGTTGTGGATGTGGGAGCTTGGTTTTTCATTGTTCATAATGTCATAATTTGATTTAAACAGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAAGAGCCATCTTTTGATCGCATCGGATTCGTGAATATGGATGTGTCGCTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACAAAATCTTCAAGGTTGATTTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCACCTTTATCTTTAGTTCATGTGCTTTCTTTGGAAGGGAAGGCGCTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGAATTATTCTTAGTCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCCTTTTCTTTCTTTCACCCGTTCTTATATGTTGTCATGCTTTCTAAGGAGAAATTCACTGGTTTTGCCAGAGATTATGCTC

mRNA sequence

CAAATCAGTATAGTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCTAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTCGCACAAAACGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAAGAGCCATCTTTTGATCGCATCGGATTCGTGAATATGGATGTGTCGCTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACAAAATCTTCAAGGTTGATTTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCACCTTTATCTTTAGTTCATGTGCTTTCTTTGGAAGGGAAGGCGCTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGAATTATTCTTAGTCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCCTTTTCTTTCTTTCACCCGTTCTTATATGTTGTCATGCTTTCTAAGGAGAAATTCACTGGTTTTGCCAGAGATTATGCTC

Coding sequence (CDS)

ATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAA

Protein sequence

MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIGNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSKSRKTNNRSESKEKGKSKKRPRILELS

Homology

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BLAST of Cp4.1LG08g06940 vs. TrEMBL
Match: A0A0A0L448_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-72
Identity = 167/206 (81.07%), Postives = 185/206 (89.81%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSK+P RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++AEKYDIEAL+G+ESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSK 180
           GN PVIPL C    SSSESESEE+SDDSITSD+++DDNEKSD++ TD  NRLSVKLKRS 
Sbjct: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180

Query: 181 SRKTNNRSESKEKGKSKKRPRILELS 207
           SRKT+ RS+SK KGKSKKRP+I  LS
Sbjct: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 202

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BLAST of Cp4.1LG08g06940 vs. TrEMBL
Match: W9QZQ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003729 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.5e-43
Identity = 127/219 (57.99%), Postives = 159/219 (72.60%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCR-NEKPITEPAPKSQVLGRVKD 60
           M + SKDLL LE K+  +SSLES+LLVCK +S  K+  + +EKPIT P P+SQVLG+VKD
Sbjct: 1   MGNTSKDLLHLEHKNPSASSLESALLVCKNDSQRKKETKPHEKPITAPIPQSQVLGKVKD 60

Query: 61  FLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAI 120
           FLGV+SEANK L+LDAK +AE YDIEAL GDES+VIE+DLMLGIADLHTPEAVAAAESAI
Sbjct: 61  FLGVISEANKSLELDAKVNAENYDIEALTGDESQVIEMDLMLGIADLHTPEAVAAAESAI 120

Query: 121 IGNQPVIPLNCSRSSSSSESESEENSDDSITSD-------------NNDDDNEKSDNKNT 180
            G QP IPL  + SSS SES+S+  SD ++ +D             N DD++E S+N+N 
Sbjct: 121 SGYQPAIPL--ADSSSESESDSDPESDSNLDTDSESEDSSDKGETINGDDNDEDSENQNC 180

Query: 181 DRGNRLSVKLKRSKSRKTNNRSESKEKGKSKKRPRILEL 206
            + +  S+K K SKS K N+  E  +  KS KRP+I+EL
Sbjct: 181 KKLS--SMKPKTSKSDKGNSSGEVTKNRKSSKRPKIVEL 215

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BLAST of Cp4.1LG08g06940 vs. TrEMBL
Match: V4S6C7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029331mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 125/209 (59.81%), Postives = 153/209 (73.21%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTS---KEPCRNEKPITEPAPKSQVLGRV 60
           M   SKDLL LE KD  +S++ES+LLVC K  T+   K+P   + P   P P+SQVLG+V
Sbjct: 1   MGGTSKDLLHLEHKDSSASAIESALLVCSKKDTNAELKKPNPGKMPSYGPVPRSQVLGKV 60

Query: 61  KDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAES 120
           K FLGV+SEANK+LQLDAKD+A+ YD+EAL G+ESEVIE+DLMLGIADLHTPEAV+AAES
Sbjct: 61  KGFLGVISEANKRLQLDAKDNAQDYDMEALTGNESEVIEMDLMLGIADLHTPEAVSAAES 120

Query: 121 AIIGNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLK 180
           AI GNQP IPL     +SSSE+E+E++SDDS      DDD E  DNK  D  N     LK
Sbjct: 121 AIAGNQPAIPL----PASSSETETEDSSDDS------DDDVE--DNKTLDPMN-----LK 180

Query: 181 RSKSRKTNNRSESKEKGKSKKRPRILELS 207
           RS++ K ++ SES    KSKKRP+I+ELS
Sbjct: 181 RSETNKDDSLSESAGNKKSKKRPKIVELS 192

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BLAST of Cp4.1LG08g06940 vs. TrEMBL
Match: V4U9K2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029295mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.5e-42
Identity = 124/205 (60.49%), Postives = 151/205 (73.66%), Query Frame = 1


Query: 5   SKDLLCLERKDLPSSSLESSLLVCKKNSTS---KEPCRNEKPITEPAPKSQVLGRVKDFL 64
           SKDLL LE KD  +S++ES+LLVC K  T+   K+P   + P   P P+SQVLG+VK FL
Sbjct: 18  SKDLLHLEHKDSSASAIESALLVCSKKDTNAELKKPNPGKMPSYGPVPRSQVLGKVKGFL 77

Query: 65  GVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIG 124
           GV+SEANK+LQLDAKD+A+ YD+EAL G+ESEVIE+DLMLGIADLHTPEAV+AAESAI G
Sbjct: 78  GVISEANKRLQLDAKDNAQDYDMEALTGNESEVIEMDLMLGIADLHTPEAVSAAESAIAG 137

Query: 125 NQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSKS 184
           NQP IPL     +SSSE+E+E +SDDS      DDD E  DNK  D  N     LKRS++
Sbjct: 138 NQPAIPL----PASSSETETENSSDDS------DDDVE--DNKTLDPMN-----LKRSET 197

Query: 185 RKTNNRSESKEKGKSKKRPRILELS 207
            K ++ SES    KSKKRP+I+ELS
Sbjct: 198 NKDDSLSESAGNKKSKKRPKIVELS 205

[Close]

BLAST of Cp4.1LG08g06940 vs. TrEMBL
Match: V4SAU0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029295mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.5e-42
Identity = 124/205 (60.49%), Postives = 151/205 (73.66%), Query Frame = 1


Query: 5   SKDLLCLERKDLPSSSLESSLLVCKKNSTS---KEPCRNEKPITEPAPKSQVLGRVKDFL 64
           SKDLL LE KD  +S++ES+LLVC K  T+   K+P   + P   P P+SQVLG+VK FL
Sbjct: 16  SKDLLHLEHKDSSASAIESALLVCSKKDTNAELKKPNPGKMPSYGPVPRSQVLGKVKGFL 75

Query: 65  GVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIG 124
           GV+SEANK+LQLDAKD+A+ YD+EAL G+ESEVIE+DLMLGIADLHTPEAV+AAESAI G
Sbjct: 76  GVISEANKRLQLDAKDNAQDYDMEALTGNESEVIEMDLMLGIADLHTPEAVSAAESAIAG 135

Query: 125 NQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSKS 184
           NQP IPL     +SSSE+E+E +SDDS      DDD E  DNK  D  N     LKRS++
Sbjct: 136 NQPAIPL----PASSSETETENSSDDS------DDDVE--DNKTLDPMN-----LKRSET 195

Query: 185 RKTNNRSESKEKGKSKKRPRILELS 207
            K ++ SES    KSKKRP+I+ELS
Sbjct: 196 NKDDSLSESAGNKKSKKRPKIVELS 203

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BLAST of Cp4.1LG08g06940 vs. TAIR10
Match: AT1G71430.1 (AT1G71430.1 unknown protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24
Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 1


Query: 6   KDLLCLERKDLPSSS-LESSLLVCKKNSTSKEPCRN---EKPITEPAPKSQVLGRVKDFL 65
           KDLL LE K+  SSS ++S+LL+C   +  K+        KP   P PKSQ+LG++K FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 66  GVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIG 125
           GV++EANKK    ++ + E Y+IEAL G+ESE+IE+DLMLG+ADL+TPEAV+AAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 126 NQPVIPLNCSRSSSSSESESEENSDDS 149
             P      S S   S+SESE     S
Sbjct: 128 IGPAAESGDSSSDDESDSESEGEESKS 150

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BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: gi|659095798|ref|XP_008448773.1| (PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 3.0e-73
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60
           MRHASKDLL LERKDL +SSLESSLLVCKKNSTSKEPCRNEKPITEPA KS VLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++A+KYDIEAL+G+ESEVI+LDLMLGIADLHTPEAVAAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSK 180
           GN PVIPL C    SSSESESEE+SDDSITSD++++DNEKSD++NTD  NRLSVKLKRS 
Sbjct: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSN 180

Query: 181 SRKTNNRSESKEKGKSKKRPRILELS 207
           SRK + RS+SK KGKSKKRP+I  LS
Sbjct: 181 SRKASCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: gi|778675227|ref|XP_004147238.2| (PREDICTED: uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.9e-72
Identity = 167/206 (81.07%), Postives = 185/206 (89.81%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSK+P RNEKPITEPA KS VLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120
           LGV+SEANKKLQ+D+K++AEKYDIEAL+G+ESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSK 180
           GN PVIPL C    SSSESESEE+SDDSITSD+++DDNEKSD++ TD  NRLSVKLKRS 
Sbjct: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180

Query: 181 SRKTNNRSESKEKGKSKKRPRILELS 207
           SRKT+ RS+SK KGKSKKRP+I  LS
Sbjct: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 202

[Close]

BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: gi|778675224|ref|XP_011650372.1| (PREDICTED: uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70
Identity = 167/210 (79.52%), Postives = 185/210 (88.10%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSL----ESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGR 60
           MRH SKDLL LERKDL SSSL    ESSLLVCKKNSTSK+P RNEKPITEPA KS VLGR
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLGVFNESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGR 60

Query: 61  VKDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAE 120
           VKDFLGV+SEANKKLQ+D+K++AEKYDIEAL+G+ESEVI+LDLMLGIADLHTPEAV AAE
Sbjct: 61  VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE 120

Query: 121 SAIIGNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKL 180
           SAIIGN PVIPL C    SSSESESEE+SDDSITSD+++DDNEKSD++ TD  NRLSVKL
Sbjct: 121 SAIIGNHPVIPLTC----SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKL 180

Query: 181 KRSKSRKTNNRSESKEKGKSKKRPRILELS 207
           KRS SRKT+ RS+SK KGKSKKRP+I  LS
Sbjct: 181 KRSNSRKTSCRSKSKGKGKSKKRPKIQVLS 206

[Close]

BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: gi|703095776|ref|XP_010095628.1| (hypothetical protein L484_003729 [Morus notabilis])

HSP 1 Score: 182.2 bits (461), Expect = 9.3e-43
Identity = 127/219 (57.99%), Postives = 159/219 (72.60%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCR-NEKPITEPAPKSQVLGRVKD 60
           M + SKDLL LE K+  +SSLES+LLVCK +S  K+  + +EKPIT P P+SQVLG+VKD
Sbjct: 1   MGNTSKDLLHLEHKNPSASSLESALLVCKNDSQRKKETKPHEKPITAPIPQSQVLGKVKD 60

Query: 61  FLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAI 120
           FLGV+SEANK L+LDAK +AE YDIEAL GDES+VIE+DLMLGIADLHTPEAVAAAESAI
Sbjct: 61  FLGVISEANKSLELDAKVNAENYDIEALTGDESQVIEMDLMLGIADLHTPEAVAAAESAI 120

Query: 121 IGNQPVIPLNCSRSSSSSESESEENSDDSITSD-------------NNDDDNEKSDNKNT 180
            G QP IPL  + SSS SES+S+  SD ++ +D             N DD++E S+N+N 
Sbjct: 121 SGYQPAIPL--ADSSSESESDSDPESDSNLDTDSESEDSSDKGETINGDDNDEDSENQNC 180

Query: 181 DRGNRLSVKLKRSKSRKTNNRSESKEKGKSKKRPRILEL 206
            + +  S+K K SKS K N+  E  +  KS KRP+I+EL
Sbjct: 181 KKLS--SMKPKTSKSDKGNSSGEVTKNRKSSKRPKIVEL 215

[Close]

BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: gi|568867059|ref|XP_006486863.1| (PREDICTED: uncharacterized protein LOC102616713 [Citrus sinensis])

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42
Identity = 126/209 (60.29%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTS---KEPCRNEKPITEPAPKSQVLGRV 60
           M   SKDLL LE KD  +S++ES LLVC K  T+   K+P   + P   P P+SQVLG+V
Sbjct: 1   MGGTSKDLLHLEHKDSSASAIESVLLVCSKKDTNAELKKPNPGKMPSYGPVPRSQVLGKV 60

Query: 61  KDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAES 120
           K FLGV+SEANK+LQLDAKD+A+ YD+EAL G+ESEVIE+DLMLGIADLHTPEAV+AAES
Sbjct: 61  KGFLGVISEANKRLQLDAKDNAQDYDMEALTGNESEVIEMDLMLGIADLHTPEAVSAAES 120

Query: 121 AIIGNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLK 180
           AI GNQP IPL     +SSSE+E+E++SDD   SD++DDD E  DNK  D  N     LK
Sbjct: 121 AIAGNQPAIPL----PASSSETETEDSSDD---SDDSDDDVE--DNKTLDPMN-----LK 180

Query: 181 RSKSRKTNNRSESKEKGKSKKRPRILELS 207
           RS++ K ++ SES    KSKKRP+I+ELS
Sbjct: 181 RSETNKDDSLSESAGNKKSKKRPKIVELS 195

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g06940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L448_CUCSA	1.3e-72	81.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017130 PE=4 SV=1	[more]
W9QZQ7_9ROSA	6.5e-43	57.99	Uncharacterized protein OS=Morus notabilis GN=L484_003729 PE=4 SV=1	[more]
V4S6C7_9ROSI	2.5e-42	59.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029331mg PE=4 SV=1	[more]
V4U9K2_9ROSI	5.5e-42	60.49	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029295mg PE=4 SV=1	[more]
V4SAU0_9ROSI	5.5e-42	60.49	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029295mg PE=4 SV=1	[more]

BLAST of Cp4.1LG08g06940 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71430.1	2.7e-24	50.34	unknown protein	[more]

BLAST of Cp4.1LG08g06940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095798\|ref\|XP_008448773.1\|	3.0e-73	81.07	PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo]	[more]
gi\|778675227\|ref\|XP_004147238.2\|	1.9e-72	81.07	PREDICTED: uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus]	[more]
gi\|778675224\|ref\|XP_011650372.1\|	1.1e-70	79.52	PREDICTED: uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus]	[more]
gi\|703095776\|ref\|XP_010095628.1\|	9.3e-43	57.99	hypothetical protein L484_003729 [Morus notabilis]	[more]
gi\|568867059\|ref\|XP_006486863.1\|	2.1e-42	60.29	PREDICTED: uncharacterized protein LOC102616713 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027921	DUF4598

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06940.1	Cp4.1LG08g06940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027921	Protein of unknown function DUF4598	PFAM	PF15370	DUF4598	coord: 54..182 score: 1.8
None	No IPR available	PANTHER	PTHR28674	FAMILY NOT NAMED	coord: 181..206 score: 5.7E-42coord: 1..145 score: 5.7
None	No IPR available	PANTHER	PTHR28674:SF1	SUBFAMILY NOT NAMED	coord: 181..206 score: 5.7E-42coord: 1..145 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g06940	Cucsa.321360	Cucumber (Gy14) v1	cgycpeB0855
Cp4.1LG08g06940	CmaCh06G008210	Cucurbita maxima (Rimu)	cmacpeB849
Cp4.1LG08g06940	CmoCh06G008430	Cucurbita moschata (Rifu)	cmocpeB795
Cp4.1LG08g06940	Cla008756	Watermelon (97103) v1	cpewmB832
Cp4.1LG08g06940	Csa3G017130	Cucumber (Chinese Long) v2	cpecuB866
Cp4.1LG08g06940	MELO3C013897	Melon (DHL92) v3.5.1	cpemeB810
Cp4.1LG08g06940	ClCG10G002170	Watermelon (Charleston Gray)	cpewcgB773
Cp4.1LG08g06940	CSPI03G02230	Wild cucumber (PI 183967)	cpecpiB868
Cp4.1LG08g06940	Lsi07G012510	Bottle gourd (USVL1VR-Ls)	cpelsiB727
Cp4.1LG08g06940	MELO3C013897.2	Melon (DHL92) v3.6.1	cpemedB953
Cp4.1LG08g06940	CsaV3_3G002260	Cucumber (Chinese Long) v3	cpecucB1063
Cp4.1LG08g06940	Bhi11G000072	Wax gourd	cpewgoB1079
Cp4.1LG08g06940	CsGy3G002130	Cucumber (Gy14) v2	cgybcpeB459
Cp4.1LG08g06940	Carg12053	Silver-seed gourd	carcpeB0807

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g06940	Cucurbita maxima (Rimu)	cmacpeB852