Cp4.1LG06g02310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g02310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCp4.1LG06 : 1281045 .. 1281836 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

mRNA sequence

ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

Coding sequence (CDS)

ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

Protein sequence

MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIWIFTL
Homology
[Close]
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match: A0A0A0L2R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646080 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 8.1e-115
Identity = 222/257 (86.38%), Postives = 235/257 (91.44%), Query Frame = 1 

Query: 9   PKPA-VNGSAAPPAANGTA-PASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWT 68
           PKP+ VNG+A     NGT  P S  KP FRQ PYRPPPYR+HRNHHRSRRNLCCCFCFWT
Sbjct: 6   PKPSSVNGAAT---TNGTTIPPSSSKPNFRQHPYRPPPYRNHRNHHRSRRNLCCCFCFWT 65

Query: 69  IIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTL 128
           IIIVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT++DSSASH+SSLFNLTL
Sbjct: 66  IIIVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSSDSSASHLSSLFNLTL 125

Query: 129 SSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSV 188
           SSFNPNSHITF+YDPF LS FSNSVLLANGSIPAFTS TKNQTVFR+LMSGAEDLDADSV
Sbjct: 126 SSFNPNSHITFSYDPFLLSTFSNSVLLANGSIPAFTSGTKNQTVFRALMSGAEDLDADSV 185

Query: 189 TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVS 248
           TSLRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEG+KG PP+GK P+VA VS
Sbjct: 186 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGMKGIPPRGKTPSVASVS 245

Query: 249 DADCKVDLRIKIWIFTL 264
           DADCKVDLRIKIWIFTL
Sbjct: 246 DADCKVDLRIKIWIFTL 259

[Close]
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match: W9RRY4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019500 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81
Identity = 164/243 (67.49%), Postives = 197/243 (81.07%), Query Frame = 1 

Query: 21  AANGTA-PASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTIIIVLGLALLAAI 80
           + NG A PA+  KPQ R  PYRP P  HHR   RS R++CCC CFW+I+I+L LALLAAI
Sbjct: 81  SGNGAANPAT--KPQPRP-PYRPQPQYHHRRRRRSGRSICCCCCFWSILILLALALLAAI 140

Query: 81  AGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAY 140
           AGAA+YVLY PHRPQFT+ SLRI+KLNLTTA+DSS+SH+++L NLT++S NPN+H+TF Y
Sbjct: 141 AGAAVYVLYHPHRPQFTVISLRIAKLNLTTASDSSSSHLTTLLNLTIASKNPNNHLTFYY 200

Query: 141 DPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGA 200
           D FTL+  SNSV + NG+IPAFTS  KN+T FR+++S ++DLD DS TSLRSDLK+K G 
Sbjct: 201 DAFTLTASSNSVQIGNGTIPAFTSEKKNETTFRAIISASQDLDTDSTTSLRSDLKRKSGI 260

Query: 201 PLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIW 260
           PL I+MDTKVKVK+  + SKKVGIRVTCE IKG  PKGK PTVA VSDA CKVDLRIKIW
Sbjct: 261 PLEIQMDTKVKVKMESLKSKKVGIRVTCEDIKGVAPKGKSPTVASVSDAKCKVDLRIKIW 320

Query: 261 IFT 263
            +T
Sbjct: 321 KWT 320

[Close]
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match: M5XRL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009995mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81
Identity = 169/269 (62.83%), Postives = 207/269 (76.95%), Query Frame = 1 

Query: 1   MQNGAHPPPKPAVNGSAAPPA-----ANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSR 60
           M +  +P  KP  NG AA PA     A  TA  S  KPQ RQ PYRP P  HHR H RS 
Sbjct: 1   MTDRVYPSSKPTTNGGAAVPAVATTTAAATANPSNTKPQLRQ-PYRPQPQYHHRRHRRSN 60

Query: 61  R--NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADS 120
              N CCC CFW+I+I+L LALLAAIAGAA+Y+LYRPHRP+FT++S+RI+KLNLTT++D 
Sbjct: 61  CHCNFCCC-CFWSILIILALALLAAIAGAAVYILYRPHRPEFTLTSVRIAKLNLTTSSDL 120

Query: 121 SASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRS 180
           S SH+++LFNLTLSS NPN+H+TF+Y+PF LS  S+ V + NGSIPAFTS TKN T FRS
Sbjct: 121 STSHLTTLFNLTLSSKNPNNHLTFSYEPFALSLSSSDVQIGNGSIPAFTSGTKNSTFFRS 180

Query: 181 LMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGT 240
           ++S ++DLD +SV SLRSDL+KK G  L ++MDTKVKV +G + SKKVGIRVTCEGIKG 
Sbjct: 181 ILSTSQDLDVESVKSLRSDLRKKTGVALELQMDTKVKVAMGKLKSKKVGIRVTCEGIKGA 240

Query: 241 PPKGKQPTVAPVSDADCKVDLRIKIWIFT 263
            PKGK P+VA V+++ CKVDLRIKIW +T
Sbjct: 241 VPKGKSPSVASVANSKCKVDLRIKIWKWT 267

[Close]
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match: A0A0D2PTM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G022000 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.9e-78
Identity = 166/274 (60.58%), Postives = 201/274 (73.36%), Query Frame = 1 

Query: 7   PPPKPAVNGSAAPPAANG---------TAPASGGKPQFR------QQPYRPPPYRHHRNH 66
           P  KPA   +AAPP ANG         T   +GG  +        +QPYR P  R H  H
Sbjct: 5   PSSKPAATTTAAPPPANGATAGPPAATTTATNGGATKSNLYNPTSRQPYRQPYNRRH--H 64

Query: 67  HRSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAA 126
           HR RRN CCC CFWTI+I+L LALL AIAG+ LYVLYRPHRP FT++SLR+ +LNLTT A
Sbjct: 65  HRPRRNYCCCCCFWTILIILILALLVAIAGSILYVLYRPHRPSFTLASLRVHRLNLTTTA 124

Query: 127 DSSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCF--SNSVLLANGSIPAFTSATKNQT 186
           DS++SH+S+LFNLTLSS NPNSH+TF YDPFTLSC   +N V + NG++PAF S +KN+T
Sbjct: 125 DSASSHLSTLFNLTLSSKNPNSHLTFTYDPFTLSCVTSNNDVFIGNGTLPAFISNSKNET 184

Query: 187 VFRS-LMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCE 246
            F+  +++ + DLDAD+V +LR DLKKK G PL IEMDTKV VK+ G+ SKKVGIRVTC+
Sbjct: 185 TFKGVVITTSSDLDADTVNNLRPDLKKKNGIPLKIEMDTKVTVKMDGLKSKKVGIRVTCD 244

Query: 247 GIKGTPPKGKQPTVAPVSDADCKVDLRIKIWIFT 263
            IKGT PKGK P+VA VS + CKVDLRIKIW +T
Sbjct: 245 DIKGTVPKGKSPSVANVSGSKCKVDLRIKIWKWT 276

[Close]
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match: A0A067KP79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07666 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 9.7e-76
Identity = 163/273 (59.71%), Postives = 203/273 (74.36%), Query Frame = 1 

Query: 1   MQNGAHPPPKPAVNGSAAPPAANGT-APASGGKPQFRQQ---------PYRPPPYRHHRN 60
           M     P  KPA NG+AA    NGT APA+   P   +          PYRP P+ + R 
Sbjct: 1   MSERVFPSSKPAANGTAA----NGTTAPATNPTPTANKSHLYNPTARPPYRPQPH-NRRR 60

Query: 61  HHRSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTA 120
             RS R++CCC CFW+++I+L L L+AAIAGAALY+LYRPHRP+F+I SLRI +LNLTT+
Sbjct: 61  RSRSGRSICCCCCFWSLLILLLLILIAAIAGAALYILYRPHRPEFSIPSLRIHRLNLTTS 120

Query: 121 ADSSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTV 180
           ADSS+SH+SSL NLT+ S NPNSH+TF YD FTLS FSN V L NG++PA++   KN+T 
Sbjct: 121 ADSSSSHLSSLVNLTVISKNPNSHLTFFYDSFTLSSFSNDVFLGNGTLPAYSLNKKNETS 180

Query: 181 FRS-LMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEG 240
           FR+ ++SG+ DLDA+SV +LRSDLKKK G  L IE+DTKVKVK+GG+ +KKVGIRVTC+G
Sbjct: 181 FRNVVVSGSNDLDAESVNTLRSDLKKKSGVTLKIELDTKVKVKMGGLKTKKVGIRVTCDG 240

Query: 241 IKGTPPKGKQPTVAPVSDADCKVDLRIKIWIFT 263
           IKG  PKGK PTVA  + + CKVDLRIKIW +T
Sbjct: 241 IKGVVPKGKSPTVAVTTGSKCKVDLRIKIWKWT 268

[Close]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match: AT5G11890.1 (AT5G11890.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 206.5 bits (524), Expect = 2.1e-53
Identity = 127/272 (46.69%), Postives = 167/272 (61.40%), Query Frame = 1 

Query: 3   NGAHP----PPKPAVNGSAAPPAANGTAPASGGKPQF----RQQPYRPPPY--RHHRNHH 62
           NGA P    PP PA     +    NG A     KPQ      +  YRP PY  RHH    
Sbjct: 16  NGAPPVGSIPPPPAPATVTSNGTTNGMA---NQKPQVYIPANRPVYRPQPYSRRHHHQSR 75

Query: 63  RSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAAD 122
            S R +CCC CFW+I+I+L LAL+ AIA  A+YV+Y P  P F++ S+RIS++NLTT++D
Sbjct: 76  PSCRRICCCCCFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPSIRISRVNLTTSSD 135

Query: 123 SSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFS--NSVLLANGSIPAFTSATKNQTV 182
           SS SH+SS FN TL S NPN H++F+YDPFT++  S  +  +L NG++PAF S   N+T 
Sbjct: 136 SSVSHLSSFFNFTLISENPNQHLSFSYDPFTVTVNSAKSGTMLGNGTVPAFFSDNGNKTS 195

Query: 183 FRSLM---SGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTC 242
           F  ++   + A +LD D    LRSDL  +      IEM TKVK+ +G + S+ V I+VTC
Sbjct: 196 FHGVIATSTAARELDPDEAKHLRSDL-TRARVGYEIEMRTKVKMIMGKLKSEGVEIKVTC 255

Query: 243 EGIKGTPPKGKQPTVAPVSDADCKVDLRIKIW 260
           EG +GT PKGK P VA      CK DL +K+W
Sbjct: 256 EGFEGTIPKGKTPIVATSKKTKCKSDLSVKVW 283

[Close]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match: AT1G17620.1 (AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 159.5 bits (402), Expect = 2.9e-39
Identity = 105/265 (39.62%), Postives = 147/265 (55.47%), Query Frame = 1 

Query: 6   HPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQP-YRPPPYRHHRNHHRSRRNLCCCFCF 65
           +P  KP        P  N T PA+  +     +P YRPP  R   +H    R  CC  C 
Sbjct: 7   YPASKPPAIVGGGAPTTNPTFPANKAQLYNANRPAYRPPAGRRRTSH---TRGCCCRCCC 66

Query: 66  WTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNL 125
           WTI +++ L L+ A A A +Y++YRP RP FT+S L+IS LN T     SA  +++  +L
Sbjct: 67  WTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFT-----SAVRLTTAISL 126

Query: 126 TLSSFNPNSHITFAYDPFTLSCFSNS------VLLANGSIPAFTSATKNQTVFRSLM-SG 185
           ++ + NPN ++ F YD   ++ +  S      V++  G+I AF+   KN T  RS + S 
Sbjct: 127 SVIARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSP 186

Query: 186 AEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKG 245
            ++LD  S   L+ DLK K    + I +++KVKVK+G + + K GIRVTCEGIK   P G
Sbjct: 187 PDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTG 246

Query: 246 KQPTVAPVSDADCKVDLRIKIWIFT 263
           K+ T A  S A CKVD R KIW  T
Sbjct: 247 KKATTATTSAAKCKVDPRFKIWKIT 263

[Close]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 72/243 (29.63%), Postives = 120/243 (49.38%), Query Frame = 1 

Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQF-------RQQPYR-PPPYRHHRNHH 60
           M    +P   P  +G  +   ++G  P     P         + Q YR PPP   HR   
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  RSRR-----NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNL 120
            SR+     N  CCFC +   + + L +LA I+ A LY++YRP  P+++I    +S +NL
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TTAADSSASHVSSLFNLTLSSFNPNSHITFAYD-PFTLSCFSNSVLLANGSIPAFTSATK 180
                +S S +S  FN+T+ S N N  I   Y+   ++  + N V ++NG +P F    K
Sbjct: 121 -----NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAK 180

Query: 181 NQTVFRSLMSGAE-DLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRV 229
           N TV + ++SG++  L +     +R+++ KK   P  +++   VK+K G V +  + + V
Sbjct: 181 NVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TVPFKLKIKAPVKIKFGSVKTWTMIVNV 236

[Close]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 78.2 bits (191), Expect = 8.5e-15
Identity = 63/200 (31.50%), Postives = 99/200 (49.50%), Query Frame = 1 

Query: 36  RQQPYR-PPPYRHHRNHHRSRRNL---CC--CFCFWTIIIVLGLALLAAIAGAALYVLYR 95
           + Q YR PPP   HR  + SRR     CC  C C+ ++  +L + +LAAIA    Y++Y+
Sbjct: 64  KDQIYRVPPPENAHRYEYLSRRKTNKSCCRRCLCY-SLSALLIIIVLAAIAFGFFYLVYQ 123

Query: 96  PHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDPFT-LSCFS 155
           PH+PQF++S + ++ +NLT     S+S  S +  + L S N    +   Y+       F 
Sbjct: 124 PHKPQFSVSGVSVTGINLT-----SSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFF 183

Query: 156 NSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTK 215
           N   L NG   AF     N TV  +++ G+      S     ++ +KKG  P  + +   
Sbjct: 184 NGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAP 243

Query: 216 VKVKIGGVNSKKVGIRVTCE 229
           VK K+G V +  + I V C+
Sbjct: 244 VKFKVGSVTTWTMTITVDCK 257

[Close]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13
Identity = 64/223 (28.70%), Postives = 104/223 (46.64%), Query Frame = 1 

Query: 8   PPKPAVNGSAAPPAANGTAPASGGKPQFRQQ--PYRPPPYRHHRNHHRSRRNLCCCFCFW 67
           PP P      AP    G++ +  G P   QQ  P  PP     R    SR   C C C+ 
Sbjct: 16  PPHPT-----APLVPRGSSRSEHGDPTKTQQAAPLDPP-----REKKGSRSCWCRCVCYT 75

Query: 68  TIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLT 127
            +++ L + ++ AI G  LY+++RP  P + I  L++++  L          +S+ FN+T
Sbjct: 76  LLVLFLLIVIVGAIVGI-LYLVFRPKFPDYNIDRLQLTRFQLNQDLS-----LSTAFNVT 135

Query: 128 LSSFNPNSHITFAY-DPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDAD 187
           +++ NPN  I   Y D   +S       ++NGS+P F    +N T+    M+G       
Sbjct: 136 ITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATS 195

Query: 188 SVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTC 228
            +T+L+   +  G  PL I +   V++K+G +   KV   V C
Sbjct: 196 LMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRC 222

[Close]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match: gi|659103860|ref|XP_008452726.1| (PREDICTED: protein YLS9 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 4.7e-116
Identity = 220/255 (86.27%), Postives = 232/255 (90.98%), Query Frame = 1 

Query: 9   PKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTII 68
           PKP+VNG+A     NGT P S  KP FRQ PYRPPPYR+H NHHR+RRNLCCCFCFWTII
Sbjct: 6   PKPSVNGAAT---TNGTIPPSSSKPNFRQHPYRPPPYRNHHNHHRTRRNLCCCFCFWTII 65

Query: 69  IVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSS 128
           IVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSS
Sbjct: 66  IVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSS 125

Query: 129 FNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTS 188
           FNPNSHITF+YDPF +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADSVTS
Sbjct: 126 FNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTS 185

Query: 189 LRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDA 248
           LRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVA VSDA
Sbjct: 186 LRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDA 245

Query: 249 DCKVDLRIKIWIFTL 264
           DCKVDLRIKIWIFTL
Sbjct: 246 DCKVDLRIKIWIFTL 257

[Close]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match: gi|449447337|ref|XP_004141425.1| (PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus])

HSP 1 Score: 421.4 bits (1082), Expect = 1.2e-114
Identity = 222/257 (86.38%), Postives = 235/257 (91.44%), Query Frame = 1 

Query: 9   PKPA-VNGSAAPPAANGTA-PASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWT 68
           PKP+ VNG+A     NGT  P S  KP FRQ PYRPPPYR+HRNHHRSRRNLCCCFCFWT
Sbjct: 6   PKPSSVNGAAT---TNGTTIPPSSSKPNFRQHPYRPPPYRNHRNHHRSRRNLCCCFCFWT 65

Query: 69  IIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTL 128
           IIIVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT++DSSASH+SSLFNLTL
Sbjct: 66  IIIVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSSDSSASHLSSLFNLTL 125

Query: 129 SSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSV 188
           SSFNPNSHITF+YDPF LS FSNSVLLANGSIPAFTS TKNQTVFR+LMSGAEDLDADSV
Sbjct: 126 SSFNPNSHITFSYDPFLLSTFSNSVLLANGSIPAFTSGTKNQTVFRALMSGAEDLDADSV 185

Query: 189 TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVS 248
           TSLRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEG+KG PP+GK P+VA VS
Sbjct: 186 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGMKGIPPRGKTPSVASVS 245

Query: 249 DADCKVDLRIKIWIFTL 264
           DADCKVDLRIKIWIFTL
Sbjct: 246 DADCKVDLRIKIWIFTL 259

[Close]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match: gi|1009134378|ref|XP_015884414.1| (PREDICTED: uncharacterized protein LOC107420063 [Ziziphus jujuba])

HSP 1 Score: 318.9 bits (816), Expect = 8.1e-84
Identity = 172/269 (63.94%), Postives = 207/269 (76.95%), Query Frame = 1 

Query: 1   MQNGAHPPPKPAVNGSAAPP----AANGTAPASGG--KPQFRQQPYRPPPYRHHRNHHRS 60
           M +  +P  KP  NG+A P      ANG  P S    KP  RQ PYRP    HHR H RS
Sbjct: 1   MADRVYPSSKPTANGAANPAPNTTTANGVNPTSAAPTKPPLRQ-PYRPQAQYHHRRHRRS 60

Query: 61  RRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSS 120
            RNLCCC CFW+I+I+LG+ALLAAIAGAA+YVLYRPHRP+FT++SLRI+KLNLTT++D+S
Sbjct: 61  NRNLCCCCCFWSILIILGIALLAAIAGAAVYVLYRPHRPEFTVTSLRIAKLNLTTSSDAS 120

Query: 121 ASHVSSLFNLTLSSFNPNSHITFAYDPFTLSC-FSNSVLLANGSIPAFTSATKNQTVFRS 180
            SH++SLF+L ++S NPNSH TF Y+ F ++C  S+ V +ANGSIPAF S  KN+T FR 
Sbjct: 121 TSHLNSLFHLAITSKNPNSHFTFFYNDFAVTCSTSDDVQIANGSIPAFFSDKKNETAFRV 180

Query: 181 LMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGT 240
            M  ++ LD DSV SLRSDLKKK G PL IE+ TKVKVK+GG+NSKKVGIRVTC+GIKGT
Sbjct: 181 AMLASQGLDVDSVNSLRSDLKKKSGIPLKIELYTKVKVKMGGLNSKKVGIRVTCDGIKGT 240

Query: 241 PPKGKQPTVAPVSDADCKVDLRIKIWIFT 263
           PPKGK P+VA VSD+ CKVDLRIKIW +T
Sbjct: 241 PPKGKSPSVASVSDSKCKVDLRIKIWKWT 268

[Close]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match: gi|703100965|ref|XP_010097061.1| (hypothetical protein L484_019500 [Morus notabilis])

HSP 1 Score: 311.2 bits (796), Expect = 1.7e-81
Identity = 164/243 (67.49%), Postives = 197/243 (81.07%), Query Frame = 1 

Query: 21  AANGTA-PASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTIIIVLGLALLAAI 80
           + NG A PA+  KPQ R  PYRP P  HHR   RS R++CCC CFW+I+I+L LALLAAI
Sbjct: 81  SGNGAANPAT--KPQPRP-PYRPQPQYHHRRRRRSGRSICCCCCFWSILILLALALLAAI 140

Query: 81  AGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAY 140
           AGAA+YVLY PHRPQFT+ SLRI+KLNLTTA+DSS+SH+++L NLT++S NPN+H+TF Y
Sbjct: 141 AGAAVYVLYHPHRPQFTVISLRIAKLNLTTASDSSSSHLTTLLNLTIASKNPNNHLTFYY 200

Query: 141 DPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGA 200
           D FTL+  SNSV + NG+IPAFTS  KN+T FR+++S ++DLD DS TSLRSDLK+K G 
Sbjct: 201 DAFTLTASSNSVQIGNGTIPAFTSEKKNETTFRAIISASQDLDTDSTTSLRSDLKRKSGI 260

Query: 201 PLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIW 260
           PL I+MDTKVKVK+  + SKKVGIRVTCE IKG  PKGK PTVA VSDA CKVDLRIKIW
Sbjct: 261 PLEIQMDTKVKVKMESLKSKKVGIRVTCEDIKGVAPKGKSPTVASVSDAKCKVDLRIKIW 320

Query: 261 IFT 263
            +T
Sbjct: 321 KWT 320

[Close]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match: gi|596165290|ref|XP_007222994.1| (hypothetical protein PRUPE_ppa009995mg [Prunus persica])

HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81
Identity = 169/269 (62.83%), Postives = 207/269 (76.95%), Query Frame = 1 

Query: 1   MQNGAHPPPKPAVNGSAAPPA-----ANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSR 60
           M +  +P  KP  NG AA PA     A  TA  S  KPQ RQ PYRP P  HHR H RS 
Sbjct: 1   MTDRVYPSSKPTTNGGAAVPAVATTTAAATANPSNTKPQLRQ-PYRPQPQYHHRRHRRSN 60

Query: 61  R--NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADS 120
              N CCC CFW+I+I+L LALLAAIAGAA+Y+LYRPHRP+FT++S+RI+KLNLTT++D 
Sbjct: 61  CHCNFCCC-CFWSILIILALALLAAIAGAAVYILYRPHRPEFTLTSVRIAKLNLTTSSDL 120

Query: 121 SASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRS 180
           S SH+++LFNLTLSS NPN+H+TF+Y+PF LS  S+ V + NGSIPAFTS TKN T FRS
Sbjct: 121 STSHLTTLFNLTLSSKNPNNHLTFSYEPFALSLSSSDVQIGNGSIPAFTSGTKNSTFFRS 180

Query: 181 LMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGT 240
           ++S ++DLD +SV SLRSDL+KK G  L ++MDTKVKV +G + SKKVGIRVTCEGIKG 
Sbjct: 181 ILSTSQDLDVESVKSLRSDLRKKTGVALELQMDTKVKVAMGKLKSKKVGIRVTCEGIKGA 240

Query: 241 PPKGKQPTVAPVSDADCKVDLRIKIWIFT 263
            PKGK P+VA V+++ CKVDLRIKIW +T
Sbjct: 241 VPKGKSPSVASVANSKCKVDLRIKIWKWT 267

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g02310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG06g02310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2R4_CUCSA8.1e-11586.38Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646080 PE=4 SV=1[more]
W9RRY4_9ROSA1.2e-8167.49Uncharacterized protein OS=Morus notabilis GN=L484_019500 PE=4 SV=1[more]
M5XRL6_PRUPE1.5e-8162.83Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009995mg PE=4 SV=1[more]
A0A0D2PTM6_GOSRA7.9e-7860.58Uncharacterized protein OS=Gossypium raimondii GN=B456_001G022000 PE=4 SV=1[more]
A0A067KP79_JATCU9.7e-7659.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07666 PE=4 SV=1[more]
BLAST of Cp4.1LG06g02310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11890.12.1e-5346.69 FUNCTIONS IN: molecular_function unknown[more]
AT1G17620.12.9e-3939.62 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G27080.12.2e-1529.63 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G21130.18.5e-1531.50 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G36970.13.6e-1328.70 NDR1/HIN1-like 25[more]
BLAST of Cp4.1LG06g02310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103860|ref|XP_008452726.1|4.7e-11686.27PREDICTED: protein YLS9 [Cucumis melo][more]
gi|449447337|ref|XP_004141425.1|1.2e-11486.38PREDICTED: uncharacterized protein At1g08160 [Cucumis sativus][more]
gi|1009134378|ref|XP_015884414.1|8.1e-8463.94PREDICTED: uncharacterized protein LOC107420063 [Ziziphus jujuba][more]
gi|703100965|ref|XP_010097061.1|1.7e-8167.49hypothetical protein L484_019500 [Morus notabilis][more]
gi|596165290|ref|XP_007222994.1|2.2e-8162.83hypothetical protein PRUPE_ppa009995mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0008146 sulfotransferase activity
molecular_function GO:0046507 UDPsulfoquinovose synthase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g02310.1Cp4.1LG06g02310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 126..227
score: 8.7
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 2..263
score: 1.9E
NoneNo IPR availablePANTHERPTHR31234:SF6SUBFAMILY NOT NAMEDcoord: 2..263
score: 1.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g02310CmoCh01G017780Cucurbita moschata (Rifu)cmocpeB462
Cp4.1LG06g02310MELO3C024389.2Melon (DHL92) v3.6.1cpemedB850
Cp4.1LG06g02310CsaV3_7G034780Cucumber (Chinese Long) v3cpecucB0994
Cp4.1LG06g02310Bhi09G000305Wax gourdcpewgoB1003
Cp4.1LG06g02310Carg10689Silver-seed gourdcarcpeB1083
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g02310Silver-seed gourdcarcpeB0142
Cp4.1LG06g02310Silver-seed gourdcarcpeB0448
Cp4.1LG06g02310Cucumber (Chinese Long) v3cpecucB0969
Cp4.1LG06g02310Wax gourdcpewgoB0997
Cp4.1LG06g02310Cucurbita pepo (Zucchini)cpecpeB459
Cp4.1LG06g02310Cucumber (Gy14) v1cgycpeB0784
Cp4.1LG06g02310Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g02310Cucurbita maxima (Rimu)cmacpeB199
Cp4.1LG06g02310Cucurbita maxima (Rimu)cmacpeB507
Cp4.1LG06g02310Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g02310Cucurbita moschata (Rifu)cmocpeB172
Cp4.1LG06g02310Cucurbita moschata (Rifu)cmocpeB465
Cp4.1LG06g02310Wild cucumber (PI 183967)cpecpiB784
Cp4.1LG06g02310Cucumber (Chinese Long) v2cpecuB782
Cp4.1LG06g02310Bottle gourd (USVL1VR-Ls)cpelsiB638
Cp4.1LG06g02310Watermelon (Charleston Gray)cpewcgB702
Cp4.1LG06g02310Watermelon (97103) v1cpewmB767
Cp4.1LG06g02310Melon (DHL92) v3.5.1cpemeB734
Cp4.1LG06g02310Cucumber (Gy14) v2cgybcpeB139
Cp4.1LG06g02310Cucumber (Gy14) v2cgybcpeB562
Cp4.1LG06g02310Melon (DHL92) v3.6.1cpemedB867