Cp4.1LG05g03410 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATGTGATTACAATACCAAACTCGAGATATTTAGGAGTCCTACTGTATACCAAACTCAAGATATTTAGGAGTTCTATAGTAATTTAAAAGTCAATTCAATGCATTTTAACAAATAAATAATTAAAGTTCAACCAGTAATGATACTTCCTATCCTAATTATTGATTCTAATTTCTAAATTGAAATAGACAGCATGGCCAAAATTCATTACTCTATTCTGAAAGAAAAATAAAATAAGAGGATATTCTTCACAAAAATTATAACACACAATAGTAATAATAATACNCTAAATTGAAATAGACAGCATGGCCAAAATTCATTACTCTATCCTGAAAGAAAAATAAAATAAGAGGATATTCTTCACAAAAACTATAACATATAATAGTAATAATAATACAAATGGAGGATGTAATCCGGATATTAATTAAGAAAAGAAAGTCGAGAACCTCAACTAGTTCGAAAATCAAATCTTCCAGCCTACATCGAAATCATATCATAAAATTTAAGGAAAAAAAAACAAAACTATATGTCCTCATGCATGATTAACACGTTGAATCCCATTAAAGGAAAAAAGAAAAAAACAAAGCTAATCAACTCAATCCCACGAATATCTTCTCCTATTTTTAAGTTCCGACTTGAAAGTTTCACACACAAATTAAGATATTGCTGAAGGATCATGGAGGCCCAAAAAGTATTTGGGAGAGGAGACAGAATCTTCTCTCCCAAATGGCTAAAGGTTTCATTTTCTGCAGTTTCTGTCTTTGATGGTGAAGCAGCCTGTTTTCCTTGCATGACAGCTGATTTAAAGGCAGTGACTTTCACTGTATGGATGAAGTCCCTGATCATGCAAGGAAATGGCCTTACTGTTTTCAATGAAAATGGTCAGGTTGCTTATCGCATAGACAATTATGATGAGAAGAGAAGCAGGGAAGTCTTTTTGATGGATCTCAGAGGGAAACTTCTCTTTACGGTGCGTCGAAAGGTGGGTTTCCATGAACAAGGACTGAATATTACCGTGTACATTTCAAGCACTGTTTTTCCTCATTGATTCTTTTTGGTTTCCTTTGGCAGAGTATTTGGTTTTTATGTGATTGGGAAGGATTTAAGGAGGAGGACGTAAATACAGAGGAAAGAAAACCATTCTTTAGAGCGAAAAAGATTCTCAGAGTTTTCAGTAATAAGTTAAGCTGTGATGTAAAATTATGCGGAGATGAATCTCAGGCAAGTTTGTGCTATAGGTTTGAGGGATTTTGGGGCAAAATAGCATTCAGAATATTAGACAGCCGGGGAGGACTTGTTGCAGAGGTAAGGCTTTTTGTTTCAAACTAAATTGACAAAATTTCATAGTTTTAGGGTTTACCTGTAGGTCTAACCTTGAACCCATCTTTTTAAACCATTTATTATTTACATGGTCTTTATGGACCATTAGGTCAATTCATGGTAGTTCCTTCCATACACTGCATCGGTATCATATGGTCCATTTAAGGCTTAAACCACAAGATTTAATCGAATTCTATTGGTTTTTCCCACTTGTAGTTGATGCATGACTTTAGTCACGCTCACTTGTTATGAAATGAAGTAAGTATCATTTGGGTTTGTGCAGGCAAAGAGAAAGCAATCATCTCTAGGAGTTCAATTGGGAGAAGATGTTATGAGTTTGGTCCTATTACAGACTAATTTAGATCATTCCCTTATCATGGCTCTTGTCACTATGTACCTGTTGATTCAACGTAGAATATGATTCATTTGTTTCAACATTGAGAAAAGGAGACAAACCTGGAACAATGCCTGAAAGACTGACGTGTGTTTGCTTCCCATAGTCAAGCTTGCAAATTGGATCCAAAGTATCCAGCTTCTTGACCAATTTGTCCGTTTGCCCTTCAAATATTTCAAGAGAACTAGAGCAGCCATAGAAAAGTATAGAATGGAATTCTTTTGGTATACCTGTAAAGCGCATTCTTGCATGCTTACTTTTACACTGGATGTTATGTCAGTGGATTTCTTATATCAGACAAGGTATGGTTGGTGGTTTCTGGACCACCCCAGTTGCTTCAGTTATGAGGCTTGGTGGGATGAATTGTTTGTCAAATGCCACTGCCTGCAACAGACTTAATTACTGGAACTTCCCTGCAAAATAAAAAGGTTTAACCATAGGAGATCTAGTTCTAATTTCACAAAGGTCCTTTTCTCCCCTTTCCCATCCCAAATTGTTGACCATGGAATAATAAAAGGAAAAAAAGAAAGAAAAAAAAACTCGTGTATTTCATGACAAGCTCGGGAAAATAATTACAGAATTTAAAAATAAAATAAAGAAAAGCTCAACAGACCAAAAATATTTGACTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGTGTATTTCATGACAAGCTCGGGAAAATAATTACAGAATTTAAAAATAAAACCTTTTTTTTTTTTTTTTTTTCTCATCTTTTTTGGTGGAGGAGGGGGCTATATAATTTACAAACAAATTATTTATTTACTCTAACATAATGTCTTGTGTGGTATCACGCTACTTTTTTTCTGTACTACGAAATAATTACTAGATCTTCTTGTAATTTTTAAGACTACGAAGAGTCATTACAAGCTGTTGTCTTTCACCTTCTACCTCTGCAAACTTGAGACTTATCTCTGAATATCTCTCTTGCATTTCCTTTAGTTCAATTTCCATTAATTTGTTTCTTTCCCTTAATAATTCTAATTCTGTAGAAAAATGGTCATAATTGGTATCGCTGTTGTCAAGTTCGCAGGCTTTCATTTCTGTCTCTGCTGAAATTTTATCATTCCTGCGGAGAATA CCATGTGATTACAATACCAAACTCGAGATATTTAGGAGTCCTACTGTATACCAAACTCAAGATATTTAGGAGTTCTATAGTAATTTAAAAGTCAATTCAATGCATTTTAACAAATAAATAATTAAAGTTCAACCAGTAATGATACTTCCTATCCTAATTATTGATTCTAATTTCTAAATTGAAATAGACAGCATGGCCAAAATTCATTACTCTATTCTGAAAGAAAAATAAAATAAGAGGATATTCTTCACAAAAATTATAACACACAATAGTAATAATAATACNCTAAATTGAAATAGACAGCATGGCCAAAATTCATTACTCTATCCTGAAAGAAAAATAAAATAAGAGGATATTCTTCACAAAAACTATAACATATAATAGTAATAATAATACAAATGGAGGATGTAATCCGGATATTAATTAAGAAAAGAAAGTCGAGAACCTCAACTAGTTCGAAAATCAAATCTTCCAGCCTACATCGAAATCATATCATAAAATTTAAGGAAAAAAAAACAAAACTATATGTCCTCATGCATGATTAACACGTTGAATCCCATTAAAGGAAAAAAGAAAAAAACAAAGCTAATCAACTCAATCCCACGAATATCTTCTCCTATTTTTAAGTTCCGACTTGAAAGTTTCACACACAAATTAAGATATTGCTGAAGGATCATGGAGGCCCAAAAAGTATTTGGGAGAGGAGACAGAATCTTCTCTCCCAAATGGCTAAAGGTTTCATTTTCTGCAGTTTCTGTCTTTGATGGTGAAGCAGCCTGTTTTCCTTGCATGACAGCTGATTTAAAGGCAGTGACTTTCACTGTATGGATGAAGTCCCTGATCATGCAAGGAAATGGCCTTACTGTTTTCAATGAAAATGGTCAGGTTGCTTATCGCATAGACAATTATGATGAGAAGAGAAGCAGGGAAGTCTTTTTGATGGATCTCAGAGGGAAACTTCTCTTTACGGTGCGTCGAAAGAGTATTTGGTTTTTATGTGATTGGGAAGGATTTAAGGAGGAGGACGTAAATACAGAGGAAAGAAAACCATTCTTTAGAGCGAAAAAGATTCTCAGAGTTTTCAGTAATAAGTTAAGCTGTGATGTAAAATTATGCGGAGATGAATCTCAGGCAAGTTTGTGCTATAGGTTTGAGGGATTTTGGGGCAAAATAGCATTCAGAATATTAGACAGCCGGGGAGGACTTGTTGCAGAGGCAAAGAGAAAGCAATCATCTCTAGGAGTTCAATTGGGAGAAGATGTTATGAGTTTGGTCCTATTACAGACTAATTTAGATCATTCCCTTATCATGGCTCTTGTCACTATGTACCTGTTGATTCAACGTAGAATATGATTCATTTGTTTCAACATTGAGAAAAGGAGACAAACCTGGAACAATGCCTGAAAGACTGACGTGTGTTTGCTTCCCATAGTCAAGCTTGCAAATTGGATCCAAAGTATCCAGCTTCTTGACCAATTTGTCCGTTTGCCCTTCAAATATTTCAAGAGAACTAGAGCAGCCATAGAAAAGTATAGAATGGAATTCTTTTGGTATACCTGTAAAGCGCATTCTTGCATGCTTACTTTTACACTGGATGTTATGTCAGTGGATTTCTTATATCAGACAAGGTATGGTTGGTGGTTTCTGGACCACCCCAGTTGCTTCAGTTATGAGGCTTGGTGGGATGAATTGTTTGTCAAATGCCACTGCCTGCAACAGACTTAATTACTGGAACTTCCCTGCAAAATAAAAAGGTTTAACCATAGGAGATCTAGTTCTAATTTCACAAAGGTCCTTTTCTCCCCTTTCCCATCCCAAATTGTTGACCATGGAATAATAAAAGGAAAAAAAGAAAGAAAAAAAAACTCGTGTATTTCATGACAAGCTCGGGAAAATAATTACAGAATTTAAAAATAAAATAAAGAAAAGCTCAACAGACCAAAAATATTTGACTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGTGTATTTCATGACAAGCTCGGGAAAATAATTACAGAATTTAAAAATAAAACCTTTTTTTTTTTTTTTTTTTCTCATCTTTTTTGGTGGAGGAGGGGGCTATATAATTTACAAACAAATTATTTATTTACTCTAACATAATGTCTTGTGTGGTATCACGCTACTTTTTTTCTGTACTACGAAATAATTACTAGATCTTCTTGTAATTTTTAAGACTACGAAGAGTCATTACAAGCTGTTGTCTTTCACCTTCTACCTCTGCAAACTTGAGACTTATCTCTGAATATCTCTCTTGCATTTCCTTTAGTTCAATTTCCATTAATTTGTTTCTTTCCCTTAATAATTCTAATTCTGTAGAAAAATGGTCATAATTGGTATCGCTGTTGTCAAGTTCGCAGGCTTTCATTTCTGTCTCTGCTGAAATTTTATCATTCCTGCGGAGAATA ATGGAGGCCCAAAAAGTATTTGGGAGAGGAGACAGAATCTTCTCTCCCAAATGGCTAAAGGTTTCATTTTCTGCAGTTTCTGTCTTTGATGGTGAAGCAGCCTGTTTTCCTTGCATGACAGCTGATTTAAAGGCAGTGACTTTCACTGTATGGATGAAGTCCCTGATCATGCAAGGAAATGGCCTTACTGTTTTCAATGAAAATGGTCAGGTTGCTTATCGCATAGACAATTATGATGAGAAGAGAAGCAGGGAAGTCTTTTTGATGGATCTCAGAGGGAAACTTCTCTTTACGGTGCGTCGAAAGAGTATTTGGTTTTTATGTGATTGGGAAGGATTTAAGGAGGAGGACGTAAATACAGAGGAAAGAAAACCATTCTTTAGAGCGAAAAAGATTCTCAGAGTTTTCAGTAATAAGTTAAGCTGTGATGTAAAATTATGCGGAGATGAATCTCAGGCAAGTTTGTGCTATAGGTTTGAGGGATTTTGGGGCAAAATAGCATTCAGAATATTAGACAGCCGGGGAGGACTTGTTGCAGAGGCAAAGAGAAAGCAATCATCTCTAGGAGTTCAATTGGGAGAAGATGTTATGAGTTTGGTCCTATTACAGACTAATTTAGATCATTCCCTTATCATGGCTCTTGTCACTATGTACCTGTTGATTCAACGTAGAATATGA MEAQKVFGRGDRIFSPKWLKVSFSAVSVFDGEAACFPCMTADLKAVTFTVWMKSLIMQGNGLTVFNENGQVAYRIDNYDEKRSREVFLMDLRGKLLFTVRRKSIWFLCDWEGFKEEDVNTEERKPFFRAKKILRVFSNKLSCDVKLCGDESQASLCYRFEGFWGKIAFRILDSRGGLVAEAKRKQSSLGVQLGEDVMSLVLLQTNLDHSLIMALVTMYLLIQRRI
BLAST of Cp4.1LG05g03410 vs. Swiss-Prot
Match: LOR4_ARATH (Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33 Identity = 84/197 (42.64%), Postives = 124/197 (62.94%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. Swiss-Prot
Match: LOR11_ARATH (Protein LURP-one-related 11 OS=Arabidopsis thaliana GN=At3g14260 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.1e-28 Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. Swiss-Prot
Match: LOR2_ARATH (Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870 PE=2 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 8.6e-26 Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. Swiss-Prot
Match: LOR3_ARATH (Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890 PE=2 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 8.6e-26 Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. Swiss-Prot
Match: LOR8_ARATH (Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.6e-18 Identity = 61/185 (32.97%), Postives = 98/185 (52.97%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TrEMBL
Match: A0A0A0KKK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154800 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.3e-97 Identity = 180/227 (79.30%), Postives = 199/227 (87.67%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TrEMBL
Match: W9QPQ3_9ROSA (Protein LURP-one-related 11 OS=Morus notabilis GN=L484_024310 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46 Identity = 101/186 (54.30%), Postives = 135/186 (72.58%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TrEMBL
Match: A0A059CI06_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01869 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.5e-45 Identity = 102/203 (50.25%), Postives = 141/203 (69.46%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TrEMBL
Match: D7TW17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03750 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 9.9e-45 Identity = 95/188 (50.53%), Postives = 136/188 (72.34%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TrEMBL
Match: A0A061G4D1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016225 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44 Identity = 102/181 (56.35%), Postives = 125/181 (69.06%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TAIR10
Match: AT1G63410.1 (AT1G63410.1 Protein of unknown function (DUF567)) HSP 1 Score: 139.8 bits (351), Expect = 2.0e-33 Identity = 81/192 (42.19%), Postives = 120/192 (62.50%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TAIR10
Match: AT3G14260.1 (AT3G14260.1 Protein of unknown function (DUF567)) HSP 1 Score: 125.6 bits (314), Expect = 4.0e-29 Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TAIR10
Match: AT1G53870.1 (AT1G53870.1 Protein of unknown function (DUF567)) HSP 1 Score: 118.6 bits (296), Expect = 4.9e-27 Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TAIR10
Match: AT1G53880.1 (AT1G53880.1 Eukaryotic translation initiation factor 2B (eIF-2B) family protein) HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23 Identity = 70/211 (33.18%), Postives = 113/211 (53.55%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. TAIR10
Match: AT1G53900.1 (AT1G53900.1 Eukaryotic translation initiation factor 2B (eIF-2B) family protein) HSP 1 Score: 106.3 bits (264), Expect = 2.5e-23 Identity = 70/211 (33.18%), Postives = 113/211 (53.55%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. NCBI nr
Match: gi|700194941|gb|KGN50118.1| (hypothetical protein Csa_5G154800 [Cucumis sativus]) HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97 Identity = 180/227 (79.30%), Postives = 199/227 (87.67%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. NCBI nr
Match: gi|778699700|ref|XP_004143985.2| (PREDICTED: protein LURP-one-related 4-like [Cucumis sativus]) HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97 Identity = 180/227 (79.30%), Postives = 199/227 (87.67%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. NCBI nr
Match: gi|659073769|ref|XP_008437243.1| (PREDICTED: protein LURP-one-related 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 356.3 bits (913), Expect = 3.9e-95 Identity = 180/227 (79.30%), Postives = 199/227 (87.67%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. NCBI nr
Match: gi|659073771|ref|XP_008437244.1| (PREDICTED: protein LURP-one-related 4-like isoform X2 [Cucumis melo]) HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75 Identity = 142/182 (78.02%), Postives = 156/182 (85.71%), Query Frame = 1
BLAST of Cp4.1LG05g03410 vs. NCBI nr
Match: gi|703071861|ref|XP_010089135.1| (Protein LURP-one-related 11 [Morus notabilis]) HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46 Identity = 101/186 (54.30%), Postives = 135/186 (72.58%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|