Cp4.1LG02g07940 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g07940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSAUR-like auxin-responsive protein family
LocationCp4.1LG02 : 414547 .. 414999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

mRNA sequence

ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

Coding sequence (CDS)

ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA

Protein sequence

MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQSYYHIGIRNRVDFWPESRPLLHGLAEKSIW
Homology
[Close]
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1 

Query: 27  KARISANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL +AEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  SGPLAIPCDESVFEEVIRFIS 104
           +G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-12
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 35  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL  + +EYG++  G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVI 100
           FE+V+
Sbjct: 104 FEQVV 108

[Close]
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 20  MLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL ++ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FSNSGPLAIPCDESVFEEVI 100
           +   G L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 1 

Query: 37  SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFE 96
           S VP GHV V VG    RFVV A  LNHPVF  LL  + +EYG+   G L IPC   VFE
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 97  EVIRFISRSEP 108
            ++  +    P
Sbjct: 108 RIMESLRLGLP 118

[Close]
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-11
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 16  RLRQMLRR--WRNKARISANRIPSD-VPAGHVAVCVGTS---CRRFVVRATYLNHPVFKK 75
           RL+Q  RR   R  A I  +   +D VP GH+A+ VG     C R +V   Y NHP+F +
Sbjct: 53  RLKQSFRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGE 112

Query: 76  LLVEAEEEYGFSNSGPLAIPCDESVFEEV 99
           LL EAE+EYGF + G + IPC  S FE V
Sbjct: 113 LLREAEKEYGFCHEGGITIPCLYSDFERV 141

[Close]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match: A0A0A0LDJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G866530 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-73
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
           SY HIGIR  +D WPESRPLLHGLAEKSI
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSI 149

[Close]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match: A0A061FKF0_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_034196 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-67
Identity = 123/150 (82.00%), Postives = 136/150 (90.67%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVP GHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSAGRIPSDVPEGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE  +S RFV L+D +
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESGHSARFVNLEDFK 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
              H+GIR++++ W ESRPLLHG AEK+IW
Sbjct: 121 GNCHVGIRSQLNLWTESRPLLHGFAEKTIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match: A0A067KXE4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08236 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.4e-66
Identity = 121/150 (80.67%), Postives = 135/150 (90.00%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AG GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT+ RRFVVRAT
Sbjct: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTTGRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGFSN GPLAIPCDE+VFEEV+R+ISRSE  NS RF  L+D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFSNQGPLAIPCDETVFEEVLRYISRSESGNSIRFSNLEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G+R+ +D W ESRPLLHG A+K+IW
Sbjct: 121 RYCHVGVRSTLDLWTESRPLLHGFADKTIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match: A0A067HAW0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043725mg PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-66
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ G GKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVPAG+VAVCVGTSCRRFVVRAT
Sbjct: 1   MSVGFGKCSKIRHIVRLRQMLRRWRNKARMSAARIPSDVPAGYVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDES+FEE IRFISRSE  +S RFV  +D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESLFEEAIRFISRSESGHSARFVNFEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G +  +DFW ESRPLLHG+A K+IW
Sbjct: 121 RYCHVGFKKNIDFWTESRPLLHGIASKTIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match: V4SKV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003150mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-66
Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ G GKCSKIRHIVRLRQMLRRWRNKAR+SA RIPSDVPAG+VAVCVGTSCRRFVVR T
Sbjct: 1   MSVGFGKCSKIRHIVRLRQMLRRWRNKARMSAARIPSDVPAGYVAVCVGTSCRRFVVRTT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDES+FEE IRFISRSE  +S RFV  +D Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESLFEEAIRFISRSESGHSARFVNFEDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Y H+G +  +DFW ESRPLLHG+A K+IW
Sbjct: 121 RYCHVGFKKNIDFWTESRPLLHGIASKTIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match: AT1G75590.1 (AT1G75590.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 220.7 bits (561), Expect = 6.1e-58
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR---IPSDVPAGHVAVCVGTSCRRFVV 60
           M  GLGKCSKIRHIVRLRQMLRRWR++AR+S++    +PSDVP+GHVAV VG+SCRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLD 120
           RATYLNHPV + LLV+AEEE+GF N GPL IPC+ESVFEE IRFISRS+   S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DCQSYYH-IGIRNRVDFWPESRPLLHGLAEKSIW 151
           D Q   H +GIR+++D W ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match: AT1G19840.1 (AT1G19840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-55
Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISA--NRIPSDVPAGHVAVCVGTSCRRFVVR 60
           M   L KCSKIRHIVRLRQMLRRWRNKAR+S+    +PSDVP+GHVAVCVG+ CRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           A+YLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFISRS+   S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 CQSYY-HIGIRNRVDFWPESRPLLHGLAEKSIW 151
            Q     I I++++D   ESRPLLHG+AEK+IW
Sbjct: 121 LQKCNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match: AT5G10990.1 (AT5G10990.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-52
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTSCRRFVVR 60
           M  G+GKCSKIRHIV+LRQMLR+WRNKAR+S+ R  +PSDVP+GHVAV VG SCRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDD 120
           ATYLNHP+   LLV+AEEE+GF+N GPL IPC+ESVFEE IRFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 CQSYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
            +   H GIR+++D   ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match: AT4G34750.1 (AT4G34750.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.5 bits (397), Expect = 6.3e-39
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 1 

Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSE-PPNSGR----FVKLD 124
           NHP+F++LL EAEEEYGF+N GPLAIPCDES+FE++I  ++R E   +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DCQSYYHIGI-RNRVDFWPESRPLLHGLAEKSI 150
           D +   H+G+ +N V    ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNNV----ESRPLLPGIAEKSV 149

[Close]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match: AT2G24400.1 (AT2G24400.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 1 

Query: 7   KCSKIRHIVRLRQMLRRWRNKA---------------------------RISANRIPSDV 66
           K +KIR IV+L+Q+L++WR +A                           R  +    + V
Sbjct: 5   KSNKIREIVKLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDVTAV 64

Query: 67  PAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVI 115
           P G++AV VG   +R+ +   YL+H  F  LL EAEEE+GF  +G L IPC+ SVFE ++
Sbjct: 65  PKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESIL 124

[Close]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match: gi|778686744|ref|XP_011652445.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SY HIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match: gi|659132995|ref|XP_008466498.1| (PREDICTED: auxin-induced protein 6B [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 1.5e-74
Identity = 136/150 (90.67%), Postives = 142/150 (94.67%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLL++AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           SY HIGIR  +D WPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match: gi|700204887|gb|KGN60020.1| (hypothetical protein Csa_3G866530 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+AGLGKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQ 120
           YLNHPVFKKLLV+AEEEYGF+N GPLAIPCDESVFEEVIRFISRSE PNSGRFVKLDD Q
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYYHIGIRNRVDFWPESRPLLHGLAEKSI 150
           SY HIGIR  +D WPESRPLLHGLAEKSI
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSI 149

[Close]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match: gi|1009168987|ref|XP_015902955.1| (PREDICTED: auxin-induced protein 6B-like [Ziziphus jujuba])

HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68
Identity = 124/151 (82.12%), Postives = 137/151 (90.73%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ GLGKC+KIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVG SCRRFVVRAT
Sbjct: 1   MSVGLGKCTKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGRSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSG-RFVKLDDC 120
           YLNHPVFK LLV+AEEEYGF+N GPLAIPC+ES+FEEV+RFISRSE  NS  RFV L+D 
Sbjct: 61  YLNHPVFKNLLVQAEEEYGFNNHGPLAIPCEESLFEEVLRFISRSESGNSSTRFVNLEDF 120

Query: 121 QSYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           Q Y H+GIR+ +DFWP+SRPLLHG AEKSIW
Sbjct: 121 QRYCHVGIRSNLDFWPDSRPLLHGFAEKSIW 151

[Close]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match: gi|1009135108|ref|XP_015884808.1| (PREDICTED: auxin-induced protein 6B [Ziziphus jujuba])

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 123/151 (81.46%), Postives = 137/151 (90.73%), Query Frame = 1 

Query: 1   MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           M+ GLGKC+KIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVG SCRRFVVRAT
Sbjct: 1   MSVGLGKCTKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGRSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSG-RFVKLDDC 120
           YLNHPVFK LLV+AEEEYGF+N GPLAIPC+ES+FEEV+RFISRSE  +S  RFV L+D 
Sbjct: 61  YLNHPVFKNLLVQAEEEYGFNNHGPLAIPCEESLFEEVLRFISRSESGSSSTRFVNLEDF 120

Query: 121 QSYYHIGIRNRVDFWPESRPLLHGLAEKSIW 151
           Q Y H+GIR+ +DFWP+SRPLLHG AEKSIW
Sbjct: 121 QRYCHVGIRSNLDFWPDSRPLLHGFAEKSIW 151

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g07940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AX6B_SOYBN2.1e-1246.91Auxin-induced protein 6B OS=Glycine max PE=2 SV=1[more]
SAU40_ARATH8.1e-1252.31Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana GN=SAUR40 PE=2 SV=1[more]
SAU71_ARATH1.1e-1145.00Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1[more]
SAU72_ARATH5.2e-1147.89Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1[more]
SAU36_ARATH6.8e-1146.07Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1[more]
BLAST of Cp4.1LG02g07940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDJ7_CUCSA1.5e-7391.28Uncharacterized protein OS=Cucumis sativus GN=Csa_3G866530 PE=4 SV=1[more]
A0A061FKF0_THECC2.1e-6782.00SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_034196 PE=4 ... [more]
A0A067KXE4_JATCU1.4e-6680.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08236 PE=4 SV=1[more]
A0A067HAW0_CITSI2.3e-6679.33Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043725mg PE=4 SV=1[more]
V4SKV7_9ROSI6.8e-6678.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003150mg PE=4 SV=1[more]
BLAST of Cp4.1LG02g07940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75590.16.1e-5868.83 SAUR-like auxin-responsive protein family [more]
AT1G19840.13.7e-5567.32 SAUR-like auxin-responsive protein family [more]
AT5G10990.11.0e-5266.23 SAUR-like auxin-responsive protein family [more]
AT4G34750.16.3e-3955.56 SAUR-like auxin-responsive protein family [more]
AT2G24400.13.7e-1534.81 SAUR-like auxin-responsive protein family [more]
BLAST of Cp4.1LG02g07940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778686744|ref|XP_011652445.1|1.1e-7491.33PREDICTED: auxin-induced protein 6B-like [Cucumis sativus][more]
gi|659132995|ref|XP_008466498.1|1.5e-7490.67PREDICTED: auxin-induced protein 6B [Cucumis melo][more]
gi|700204887|gb|KGN60020.1|2.2e-7391.28hypothetical protein Csa_3G866530 [Cucumis sativus][more]
gi|1009168987|ref|XP_015902955.1|6.1e-6882.12PREDICTED: auxin-induced protein 6B-like [Ziziphus jujuba][more]
gi|1009135108|ref|XP_015884808.1|2.3e-6781.46PREDICTED: auxin-induced protein 6B [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07940.1Cp4.1LG02g07940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 16..101
score: 1.2
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 5..148
score: 6.0
NoneNo IPR availablePANTHERPTHR31374:SF34F6F9.11 PROTEIN-RELATEDcoord: 5..148
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g07940Cucsa.342890Cucumber (Gy14) v1cgycpeB0885
Cp4.1LG02g07940CmaCh09G001140Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g07940CmaCh01G019620Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g07940CmaCh20G008000Cucurbita maxima (Rimu)cmacpeB570
Cp4.1LG02g07940CmoCh01G020200Cucurbita moschata (Rifu)cmocpeB450
Cp4.1LG02g07940CmoCh09G001120Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g07940CmoCh20G008080Cucurbita moschata (Rifu)cmocpeB521
Cp4.1LG02g07940Cla020819Watermelon (97103) v1cpewmB559
Cp4.1LG02g07940Csa2G257100Cucumber (Chinese Long) v2cpecuB540
Cp4.1LG02g07940Csa3G866530Cucumber (Chinese Long) v2cpecuB556
Cp4.1LG02g07940MELO3C003765Melon (DHL92) v3.5.1cpemeB516
Cp4.1LG02g07940ClCG05G018470Watermelon (Charleston Gray)cpewcgB509
Cp4.1LG02g07940CSPI02G12840Wild cucumber (PI 183967)cpecpiB542
Cp4.1LG02g07940CSPI03G43260Wild cucumber (PI 183967)cpecpiB558
Cp4.1LG02g07940Lsi04G017280Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g07940Lsi10G004270Bottle gourd (USVL1VR-Ls)cpelsiB436
Cp4.1LG02g07940MELO3C003765.2Melon (DHL92) v3.6.1cpemedB614
Cp4.1LG02g07940CsaV3_3G045710Cucumber (Chinese Long) v3cpecucB0693
Cp4.1LG02g07940CsaV3_2G015370Cucumber (Chinese Long) v3cpecucB0680
Cp4.1LG02g07940Bhi09G001804Wax gourdcpewgoB0716
Cp4.1LG02g07940CsGy2G012900Cucumber (Gy14) v2cgybcpeB226
Cp4.1LG02g07940Carg17188Silver-seed gourdcarcpeB1309
Cp4.1LG02g07940Carg08687Silver-seed gourdcarcpeB0153
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g07940Cp4.1LG16g02710Cucurbita pepo (Zucchini)cpecpeB301
Cp4.1LG02g07940Cp4.1LG06g00730Cucurbita pepo (Zucchini)cpecpeB459
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g07940Cucumber (Chinese Long) v3cpecucB0676
Cp4.1LG02g07940Cucumber (Chinese Long) v3cpecucB0724
Cp4.1LG02g07940Wax gourdcpewgoB0694
Cp4.1LG02g07940Cucurbita pepo (Zucchini)cpecpeB091
Cp4.1LG02g07940Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG02g07940Cucurbita pepo (Zucchini)cpecpeB415
Cp4.1LG02g07940Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG02g07940Cucumber (Gy14) v1cgycpeB0042
Cp4.1LG02g07940Cucumber (Gy14) v1cgycpeB0437
Cp4.1LG02g07940Cucurbita maxima (Rimu)cmacpeB190
Cp4.1LG02g07940Cucurbita maxima (Rimu)cmacpeB678
Cp4.1LG02g07940Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g07940Cucurbita maxima (Rimu)cmacpeB882
Cp4.1LG02g07940Cucurbita moschata (Rifu)cmocpeB166
Cp4.1LG02g07940Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g07940Cucurbita moschata (Rifu)cmocpeB819
Cp4.1LG02g07940Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g07940Wild cucumber (PI 183967)cpecpiB586
Cp4.1LG02g07940Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g07940Cucumber (Chinese Long) v2cpecuB585
Cp4.1LG02g07940Bottle gourd (USVL1VR-Ls)cpelsiB439
Cp4.1LG02g07940Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g07940Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g07940Watermelon (97103) v1cpewmB541
Cp4.1LG02g07940Watermelon (97103) v1cpewmB577
Cp4.1LG02g07940Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g07940Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g07940Cucumber (Gy14) v2cgybcpeB387
Cp4.1LG02g07940Cucumber (Gy14) v2cgybcpeB823
Cp4.1LG02g07940Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g07940Melon (DHL92) v3.6.1cpemedB649
Cp4.1LG02g07940Silver-seed gourdcarcpeB0202
Cp4.1LG02g07940Silver-seed gourdcarcpeB1362