Cp4.1LG02g07780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCTACGTCTTCTCATGAACCGTTTCCCCTCACTCCCACTCTAATATATATATATATATATATATATATATTCCCTAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTATATATCAATTATATAATAGTTATTTATATTATGGGGTGTTGTAGTGGGAATTCTTCAGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGGTGGGCCAATTGAGGGAAAATAAAAACCAAATGATTTCCAGAATTAATCTCACAACCCATCTTTTTCTCAACGTTGAAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA ATGTCTCCGGTTCTCAGTGAAATCCTCCGTTCCGGTTTCACCATAAGCTCATCTCTCCGCCGCCGCACCCACTTAGTTCAGTCCTTCTCCGTTGTATTCCTCCACTGGTTCGATATCTCAGATTGGGGTTCAGAACCAGAGCTCTGGTTCGGAAGAGGAGCTGAGGCAATTGATGGACCAGAGAAAAAGAAGGAGAATGCAATCGAACCGGGAATCGGCGCGGCGGTCGAGGATGCGGAAACAGCAGCACTTGGACGGGCTGATGGCGCAGCTGAAAACTCTGTTTTGAGAGCTCAGATTCTGGAACTTACTCATAGATTAGACTCCCTAAACCGGATCTTATCTCACATCAACAACAACAACAACGACAAAGATGAAGAACAACATATTTTTCTTCAAAACTTCGATGATTACGATTATCATTATGATTTTGATTTTGATTTTGATTTTGATCATAACCCATCATTCCTCAACTCATTTCTAAGCCAGCAACCCCCCATTGTGGCTTCTGCTGATCATCACGTGCTTCACTGCTGA MSPVLSEILRSGFTISSSLRRRTHLVQSFSVVFLHWFDISDWGSEPELWFGRGAEAIDGPEKKKENAIEPGIGAAVEDAETAALGRADGAAENSVLRAQILELTHRLDSLNRILSHINNNNNDKDEEQHIFLQNFDDYDYHYDFDFDFDFDHNPSFLNSFLSQQPPIVASADHHVLHC
BLAST of Cp4.1LG02g07780 vs. TrEMBL
Match: A0A0A0LJ32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860320 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TrEMBL
Match: A0A0D2U3U9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G008000 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11 Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TrEMBL
Match: A0A0D2S4P8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G199300 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.3e-11 Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TrEMBL
Match: A0A0D2MA61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G126500 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10 Identity = 73/200 (36.50%), Postives = 95/200 (47.50%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TrEMBL
Match: V7CRI2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G011900g PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.1e-09 Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TAIR10
Match: AT1G75388.1 (AT1G75388.1 conserved peptide upstream open reading frame 5) HSP 1 Score: 68.6 bits (166), Expect = 4.6e-12 Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TAIR10
Match: AT2G18162.1 (AT2G18162.1 conserved peptide upstream open reading frame 1) HSP 1 Score: 58.9 bits (141), Expect = 3.6e-09 Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. TAIR10
Match: AT4G34588.1 (AT4G34588.1 conserved peptide upstream open reading frame 2) HSP 1 Score: 55.5 bits (132), Expect = 4.0e-08 Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: gi|778686677|ref|XP_011652434.1| (PREDICTED: ocs element-binding factor 1-like [Cucumis sativus]) HSP 1 Score: 90.5 bits (223), Expect = 3.2e-15 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: gi|659133042|ref|XP_008466523.1| (PREDICTED: ocs element-binding factor 1-like [Cucumis melo]) HSP 1 Score: 88.2 bits (217), Expect = 1.6e-14 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: gi|763796639|gb|KJB63594.1| (hypothetical protein B456_010G008000 [Gossypium raimondii]) HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11 Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: gi|763791212|gb|KJB58208.1| (hypothetical protein B456_009G199300 [Gossypium raimondii]) HSP 1 Score: 76.3 bits (186), Expect = 6.2e-11 Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = 1
BLAST of Cp4.1LG02g07780 vs. NCBI nr
Match: gi|763747033|gb|KJB14472.1| (hypothetical protein B456_002G126500 [Gossypium raimondii]) HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10 Identity = 73/200 (36.50%), Postives = 95/200 (47.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |