CmoCh19G003620 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Polygalacturonase, putative) (3.2.1.67)
Location	Cmo_Chr19 : 3297826 .. 3299344 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATTCCTTCAACCCCCTTCATTCTCTTGCCTCTCTTTTTCTTCTTCTTCTTCTTCTCGGTTTCCTCGACTACGTTCAACATCGTCGATTTCGGAGCCAAACCCGACTCCAAAACCGACATGTCGAAGGCATTTGAGGAAGCTTGGACTAGTGCCTGTCGTGCTTCGACCGCCGCCACAATTTACGTTCCCAAGGGAAGATACTATCTCTCAACTACAACTTTCAATGGCCCTTGTAGTAATAACGACATCACCATGCACGTCGATGGCACGCTCGTCGCTCCATCTGACTATGGCGTCGAAAATTGGATCACTTTTAGACATGTTGATGGAGTTAGTGTCTTTGGCGGCGTTCTTGATGGTCAAGGAGCTGGATTATGGGATTGCAAAAATTCACACAAGAGTTGTCCCCTTGGAGCCACGGTAAATAATATATATATATATATATTATTAAAGTTACCAATTTTATACAATGATTTTCCTCTTTTTTGTGTGTGTCCGTGCAGTCATTGGAATTTTCGAATTCAAAAAACATAATTGTGAGTGGGTTGACCTCGCTCAATAGTCAAATGTTTCACATAGTAGCCAATGGATGTCAAAATGTAAAAATGCAAGGAATCAAGATTTCGGCCGCTGGCAATAGTCCAAACACTGATGGCATTCATGTAGCGCTATCTTCACAAGTCACCATAATCTCATCTAGCATTAGCACTGGCGATGACTGCATTTCAGTAGGTCCTGGCACGTCCAATTTGTGGATTGAGAATGTTGCTTGTGGACCTGGACATGGAATTAGGTACTTGTTTTCGAAGTTTAATAAACTTTTTGAGCTTCATATGCTTCGTTAGTGATATCAATTTATTTGGTTGGGTTGGTGCAGCATTGGGAGTTTAGGAAAAGATGTGGAGGAGGATGGCGTTCAGAACGTGACAGTGAAAACAACTACGTTCACCAATACTCAAAATGGTGTGAGAATAAAAACATGGGGAAAGCCAAGCAAAGGGTTTGCAAGAAACATTCTTTTTCAAGATATTATAATGAATAATGTCCAAAATCCTATCATCATTGACCAAAATTATTGCCCCAACAACAAAGGTTGTCCGGGACAGGTTTGTATCGACATCTCTATACAAAATCCTATCATTATTGCTTCTAAATCTTATTTCATTCATTTACGAATAGGTTTCTGGAGTCGAAATTAGCAATGTGAGTTATCAAAACATCCACGGAACATCAGCCACTCAAGTTGCGATGAAATTCGATTGTAGCTCGAAGTTTCCATGCAGAGGGATAACGCTTGAGGATGTGAAGCTGAGTTACAAGAATGACGTAGCTGAAGCTTCTTGTAGCAATGCTGATGGAACTGCTGCTGGCTTAGTTCAGCCATCAAGTTGTTTGTAGGGAAATCATAGAACTATGTAATATTTTATGATATCCATACAAGTTCCAAGGTTGAGGTTATGGTCTTAGCAACCCACTACGGGCAGTCGTGTCAAGGGTCAACATTAAGTTTTCT

mRNA sequence

ATGGCTATTCCTTCAACCCCCTTCATTCTCTTGCCTCTCTTTTTCTTCTTCTTCTTCTTCTCGGTTTCCTCGACTACGTTCAACATCGTCGATTTCGGAGCCAAACCCGACTCCAAAACCGACATGTCGAAGGCATTTGAGGAAGCTTGGACTAGTGCCTGTCGTGCTTCGACCGCCGCCACAATTTACGTTCCCAAGGGAAGATACTATCTCTCAACTACAACTTTCAATGGCCCTTGTAGTAATAACGACATCACCATGCACGTCGATGGCACGCTCGTCGCTCCATCTGACTATGGCGTCGAAAATTGGATCACTTTTAGACATGTTGATGGAGTTAGTGTCTTTGGCGGCGTTCTTGATGGTCAAGGAGCTGGATTATGGGATTGCAAAAATTCACACAAGAGTTGTCCCCTTGGAGCCACGTCATTGGAATTTTCGAATTCAAAAAACATAATTGTGAGTGGGTTGACCTCGCTCAATAGTCAAATGTTTCACATAGTAGCCAATGGATGTCAAAATGTAAAAATGCAAGGAATCAAGATTTCGGCCGCTGGCAATAGTCCAAACACTGATGGCATTCATGTAGCGCTATCTTCACAAGTCACCATAATCTCATCTAGCATTAGCACTGGCGATGACTGCATTTCAGTAGGTCCTGGCACGTCCAATTTGTGGATTGAGAATGTTGCTTGTGGACCTGGACATGGAATTAGCATTGGGAGTTTAGGAAAAGATGTGGAGGAGGATGGCGTTCAGAACGTGACAGTGAAAACAACTACGTTCACCAATACTCAAAATGGTGTGAGAATAAAAACATGGGGAAAGCCAAGCAAAGGGTTTGCAAGAAACATTCTTTTTCAAGATATTATAATGAATAATGTCCAAAATCCTATCATCATTGACCAAAATTATTGCCCCAACAACAAAGGTTGTCCGGGACAGGTTTCTGGAGTCGAAATTAGCAATGTGAGTTATCAAAACATCCACGGAACATCAGCCACTCAAGTTGCGATGAAATTCGATTGTAGCTCGAAGTTTCCATGCAGAGGGATAACGCTTGAGGATGTGAAGCTGAGTTACAAGAATGACGTAGCTGAAGCTTCTTGTAGCAATGCTGATGGAACTGCTGCTGGCTTAGTTCAGCCATCAAGTTGTTTGTAGGGAAATCATAGAACTATGTAATATTTTATGATATCCATACAAGTTCCAAGGTTGAGGTTATGGTCTTAGCAACCCACTACGGGCAGTCGTGTCAAGGGTCAACATTAAGTTTTCT

Coding sequence (CDS)

ATGGCTATTCCTTCAACCCCCTTCATTCTCTTGCCTCTCTTTTTCTTCTTCTTCTTCTTCTCGGTTTCCTCGACTACGTTCAACATCGTCGATTTCGGAGCCAAACCCGACTCCAAAACCGACATGTCGAAGGCATTTGAGGAAGCTTGGACTAGTGCCTGTCGTGCTTCGACCGCCGCCACAATTTACGTTCCCAAGGGAAGATACTATCTCTCAACTACAACTTTCAATGGCCCTTGTAGTAATAACGACATCACCATGCACGTCGATGGCACGCTCGTCGCTCCATCTGACTATGGCGTCGAAAATTGGATCACTTTTAGACATGTTGATGGAGTTAGTGTCTTTGGCGGCGTTCTTGATGGTCAAGGAGCTGGATTATGGGATTGCAAAAATTCACACAAGAGTTGTCCCCTTGGAGCCACGTCATTGGAATTTTCGAATTCAAAAAACATAATTGTGAGTGGGTTGACCTCGCTCAATAGTCAAATGTTTCACATAGTAGCCAATGGATGTCAAAATGTAAAAATGCAAGGAATCAAGATTTCGGCCGCTGGCAATAGTCCAAACACTGATGGCATTCATGTAGCGCTATCTTCACAAGTCACCATAATCTCATCTAGCATTAGCACTGGCGATGACTGCATTTCAGTAGGTCCTGGCACGTCCAATTTGTGGATTGAGAATGTTGCTTGTGGACCTGGACATGGAATTAGCATTGGGAGTTTAGGAAAAGATGTGGAGGAGGATGGCGTTCAGAACGTGACAGTGAAAACAACTACGTTCACCAATACTCAAAATGGTGTGAGAATAAAAACATGGGGAAAGCCAAGCAAAGGGTTTGCAAGAAACATTCTTTTTCAAGATATTATAATGAATAATGTCCAAAATCCTATCATCATTGACCAAAATTATTGCCCCAACAACAAAGGTTGTCCGGGACAGGTTTCTGGAGTCGAAATTAGCAATGTGAGTTATCAAAACATCCACGGAACATCAGCCACTCAAGTTGCGATGAAATTCGATTGTAGCTCGAAGTTTCCATGCAGAGGGATAACGCTTGAGGATGTGAAGCTGAGTTACAAGAATGACGTAGCTGAAGCTTCTTGTAGCAATGCTGATGGAACTGCTGCTGGCTTAGTTCAGCCATCAAGTTGTTTGTAG

Homology

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BLAST of CmoCh19G003620 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.4e-145
Identity = 254/384 (66.15%), Postives = 302/384 (78.65%), Query Frame = 1


Query: 11  LPLFFFFFFFSV--SSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGR 70
           L L F F   S   S  T+N+   GAK D KTD +KAF  AW  AC +     IYVP G 
Sbjct: 10  LSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGT 69

Query: 71  YYLSTTTFNGPCSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQG 130
           ++L    F+GPC NN IT  + GTLVAPSDY V     NWI F HV+GV++ GG+LDGQG
Sbjct: 70  FFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQG 129

Query: 131 AGLWDCKNSH-KSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKIS 190
             LW CK  H +SCP GAT+L FS+S NI+VSGL SLNSQMFHIV N  QNV+MQG+++S
Sbjct: 130 TALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVS 189

Query: 191 AAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSL 250
            +GNSPNTDGIHV +SS VTI++S I+TGDDC+S+GPGTSNLWIE VACGPGHGISIGSL
Sbjct: 190 RSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSL 249

Query: 251 GKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQ 310
           GK+ EE GVQNVTVKT TF+ TQNG+RIK+WG+PS GFARNILFQ   M NV+NPI+IDQ
Sbjct: 250 GKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQ 309

Query: 311 NYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKN 370
           +YCP+NKGCPGQVSGV+IS+V+Y++IHGTSAT+VA+KFDCS K PCR I LEDVKL+YKN
Sbjct: 310 HYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKN 369

Query: 371 DVAEASCSNADGTAAGLVQPSSCL 388
             AE+SCS+ADGT  G+VQP+SCL
Sbjct: 370 QAAESSCSHADGTTEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003620 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.8e-106
Identity = 203/396 (51.26%), Postives = 266/396 (67.17%), Query Frame = 1


Query: 5   STPFILLPLFFFFFFFSVSST-------TFNIVDFGAKPDSKTDMSKAFEEAWTSACRAS 64
           +T  ++LPL      F++ S+       T N++ +GAKPD   D +KAF  AW  AC ++
Sbjct: 4   NTSCLILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASA 63

Query: 65  TAATIYVPKGRYYLSTTTFNG-PCSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDG 124
              TI VPKGR+ +    F+G  C    I++ + G++VAP D+ +    ++WI F  V  
Sbjct: 64  NPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTD 123

Query: 125 VSVFGGVLDGQGAGLWDCKNSH-KSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANG 184
           VS++GG+LD QG  LW CKN+   +CP GA SL FS S NI +SGLTS+NSQ FHIV + 
Sbjct: 124 VSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDN 183

Query: 185 CQNVKMQGIKISAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVA 244
             NV + G+K+SA  NSPNTDGIHV  S  V I +S I TGDDCIS+GPG++N++I+ + 
Sbjct: 184 SNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIR 243

Query: 245 CGPGHGISIGSLGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDII 304
           CGPGHGISIGSLG+  EE GV NVTV    F  T NGVRIKTWGK S  FARNI+FQ I 
Sbjct: 244 CGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHIN 303

Query: 305 MNNVQNPIIIDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRG 364
           M  V+NPIIIDQ+YC  +K CP Q SGV++SNV Y++IHGTS T+VA+  DCS + PC G
Sbjct: 304 MKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTG 363

Query: 365 ITLEDVKLSYKNDVAEASCSNADGTAAGLVQPSSCL 388
           I ++DV L   +  A+ASC NA+G+A  +V  + CL
Sbjct: 364 IVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

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BLAST of CmoCh19G003620 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.0e-82
Identity = 158/370 (42.70%), Postives = 228/370 (61.62%), Query Frame = 1


Query: 23  SSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSN 82
           S + FN+ D+GAK     D+S+A  +AW +AC +   +T+ +PKG Y +      GPC  
Sbjct: 6   SGSVFNVNDYGAK--GAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKG 65

Query: 83  NDITMHVDGTLVAPSD---YGVENWITFRHVDGVSVFG-GVLDGQGAGLWDCKNSHKS-- 142
           + I   +DG + AP+D   +  + W++F  +DG++V G G LDGQG   W   N  K+  
Sbjct: 66  SKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPN 125

Query: 143 CPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHV 202
           C   A +L F   K+ +V  +TSLNS+MFHI    C+++  Q + ++A G S NTDGIHV
Sbjct: 126 CKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHV 185

Query: 203 ALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVT 262
            +S  VTI ++ I+TGDDCIS+GPG+ N+ I  V CGPGHGISIGSLG+   E  V+ +T
Sbjct: 186 GISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGIT 245

Query: 263 VKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQV 322
           VK  TF+ T NGVR+KTW     G A ++ FQD+ MNNVQNP+I+DQ YCP  +      
Sbjct: 246 VKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAP 305

Query: 323 SGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYK--NDVAEASCSNAD 382
           S +++SN+++ NI GTS  +VA+   CS   PC  + + ++ LSY+     A ++CSN  
Sbjct: 306 SRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVK 365

Query: 383 GTAAGLVQPS 385
            T +G   P+
Sbjct: 366 PTFSGKQVPA 373

[Close]

BLAST of CmoCh19G003620 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-80
Identity = 165/389 (42.42%), Postives = 230/389 (59.13%), Query Frame = 1


Query: 7   PFILLPLFFFFFFFSVSSTTFNIV-DFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVP 66
           P + + L  F     V S  F++V  FGAK D KTD+SK F +AW  AC + T +T+ +P
Sbjct: 9   PSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIP 68

Query: 67  KGRYYLSTTTFNGPCSNNDITMHVDGTLVAPSD---YGVENWITFRHVDGVSVFGG-VLD 126
           KG Y LS     GPC    I ++V GT+ AP+D   +   NW+ F  V+   +FGG + D
Sbjct: 69  KGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFD 128

Query: 127 GQGAGLWD---CKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQ 186
           GQG+  ++   C+N      L   ++ F    N ++  +TS +S++FHI    C+N+ ++
Sbjct: 129 GQGSIAYEKNTCENREFRSKL-PVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLE 188

Query: 187 GIKISAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGI 246
            +KI A   SPNTDGIH+  S  V II+S I TGDDCIS+G GT N+ I+ + CGPGHGI
Sbjct: 189 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGI 248

Query: 247 SIGSLGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNP 306
           SIGSLGK   E+ V+ + +   T TNT NG RIKTW     G    I F+DI MNNV +P
Sbjct: 249 SIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSP 308

Query: 307 IIIDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVK 366
           I+IDQ YCP NK    + S V++SN+S++NI GTSA   A+KF CS   PC+ + L D+ 
Sbjct: 309 ILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADID 368

Query: 367 LSYKN-DVAEASCSNADGTAAGLVQPSSC 387
           + +   + A + C N     +G + P  C
Sbjct: 369 IKHNGAEPATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of CmoCh19G003620 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-79
Identity = 164/389 (42.16%), Postives = 228/389 (58.61%), Query Frame = 1


Query: 7   PFILLPLFFFFFFFSVSSTTFNIV-DFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVP 66
           P + + L  F     V    F++V  FGAK D KTD+SK F +AW  AC + T +T+ +P
Sbjct: 9   PSMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIP 68

Query: 67  KGRYYLSTTTFNGPCSNNDITMHVDGTLVAPSD---YGVENWITFRHVDGVSVFGG-VLD 126
           KG Y LS     GPC    I ++V GT+ AP+D   +   NW+ F  V+   +FGG + D
Sbjct: 69  KGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFD 128

Query: 127 GQGAGLWD---CKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQ 186
           GQG+  ++   C+N      L   ++ F    N ++  +TS +S++FHI    C+N+ ++
Sbjct: 129 GQGSIAYEKNTCENREFRSKL-PVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLE 188

Query: 187 GIKISAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGI 246
            +KI A   SPNTDGIH+  S  V II+S I TGDDCIS+G GT N+ I+ + CGPGHGI
Sbjct: 189 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGI 248

Query: 247 SIGSLGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNP 306
           SIGSLGK   E+ V+ + +   T TNT NG RIKTW     G    I F+DI MNNV +P
Sbjct: 249 SIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSP 308

Query: 307 IIIDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVK 366
           I+IDQ YCP NK    + S V++SN+S++NI GTSA   A+KF CS   PC+ + L D+ 
Sbjct: 309 ILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADID 368

Query: 367 LSYKN-DVAEASCSNADGTAAGLVQPSSC 387
           + +   + A + C N      G + P  C
Sbjct: 369 IQHNGAEPATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of CmoCh19G003620 vs. TrEMBL
Match: A0A0A0M095_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627460 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.4e-171
Identity = 296/380 (77.89%), Postives = 342/380 (90.00%), Query Frame = 1


Query: 13  LFFFFFFFSVSS-TTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYL 72
           LFF F F +++S +TFN+VDFGAKP+ +TD S+AFE AW SACRA TA +IYVPKGR+Y+
Sbjct: 7   LFFPFLFLTLASASTFNVVDFGAKPNVQTDSSQAFEAAWASACRARTAVSIYVPKGRFYV 66

Query: 73  STTTFNGPCSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQGAGL 132
           ++  F GPC+NNDIT+ +DGTL+APS+YGV     NWITFR VDGV++FGGVLD QG+GL
Sbjct: 67  ASLAFEGPCNNNDITIRIDGTLLAPSNYGVIANSGNWITFRRVDGVTLFGGVLDAQGSGL 126

Query: 133 WDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGN 192
           W CKNS  SCP GATSLEFSNSKNI+VSGLTSLNSQMFHIV NGCQNVK QG+K+SAAGN
Sbjct: 127 WACKNSKSSCPPGATSLEFSNSKNIMVSGLTSLNSQMFHIVINGCQNVKAQGLKVSAAGN 186

Query: 193 SPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDV 252
           SPNTDGIHVALSS VTI++S I TGDDCIS+GPGTSNLWIENVACGPGHGISIGSLG++V
Sbjct: 187 SPNTDGIHVALSSTVTILNSIIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGREV 246

Query: 253 EEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCP 312
           +EDGV+NVTVK+ TFTNTQNGVRIKTWGKPS GFAR+++FQDI+M NV+NPIIIDQNYCP
Sbjct: 247 QEDGVENVTVKSATFTNTQNGVRIKTWGKPSNGFARSVIFQDIVMVNVENPIIIDQNYCP 306

Query: 313 NNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAE 372
           +NKGCPGQ SGV+IS+V+Y+NIHGTSATQVAMKFDCSSKFPC  ITLEDVKLS KN+ AE
Sbjct: 307 DNKGCPGQDSGVKISDVTYRNIHGTSATQVAMKFDCSSKFPCSDITLEDVKLSCKNEAAE 366

Query: 373 ASCSNADGTAAGLVQPSSCL 388
           ASCS+A+G+AAGLVQPSSCL
Sbjct: 367 ASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of CmoCh19G003620 vs. TrEMBL
Match: A0A059AUR6_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H00254 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 4.8e-156
Identity = 262/365 (71.78%), Postives = 310/365 (84.93%), Query Frame = 1


Query: 27  FNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSNNDIT 86
           +N+V  GAK D KTD SKAF+ AW SAC ++ AA++YVP+GR+ + + +FNGPC N+ IT
Sbjct: 2   YNVVSLGAKADGKTDSSKAFQSAWASACGSTRAASVYVPQGRFLVKSASFNGPCKNSAIT 61

Query: 87  MHVDGTLVAPSDYGVEN----WITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPLGAT 146
           + +DGTLVAPS+Y V      WI FRHV GVS+ GG LDGQG GLW CK SHKSCP+GAT
Sbjct: 62  VRIDGTLVAPSNYNVNGNARRWIVFRHVTGVSMIGGTLDGQGTGLWACKLSHKSCPIGAT 121

Query: 147 SLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVALSSQV 206
           +L  SNS+NI+V GL SLNSQMFHIV NGCQNVKMQG+K+SA+G SPNTDGIHV  S+ V
Sbjct: 122 NLLISNSQNILVRGLRSLNSQMFHIVINGCQNVKMQGVKVSASGTSPNTDGIHVGASTGV 181

Query: 207 TIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKTTTF 266
           TI++S I TGDDC+S+GPG++NLWIENVACGPGHGISIGSLGK  +EDGVQNVTVKT TF
Sbjct: 182 TILNSKIGTGDDCVSIGPGSNNLWIENVACGPGHGISIGSLGKTQQEDGVQNVTVKTVTF 241

Query: 267 TNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGVEIS 326
           T TQNGVRIK+WG+PS GFARNILFQ  IMNNVQNPIIIDQNYCP+N GCPGQ SGV +S
Sbjct: 242 TGTQNGVRIKSWGRPSNGFARNILFQHAIMNNVQNPIIIDQNYCPHNSGCPGQASGVRVS 301

Query: 327 NVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTAAGLVQ 386
           +V+YQ+IHGTSAT VA+KFDCSSK+PC GI ++DVKL+Y+N VA ASC++ADGTA+GLVQ
Sbjct: 302 DVTYQDIHGTSATSVAVKFDCSSKYPCTGIRMQDVKLTYRNKVATASCAHADGTASGLVQ 361

Query: 387 PSSCL 388
           PSSCL
Sbjct: 362 PSSCL 366

[Close]

BLAST of CmoCh19G003620 vs. TrEMBL
Match: G7JIR7_MEDTR (Polygalacturonase OS=Medicago truncatula GN=MTR_4g083660 PE=3 SV=2)

HSP 1 Score: 555.1 bits (1429), Expect = 6.9e-155
Identity = 262/370 (70.81%), Postives = 310/370 (83.78%), Query Frame = 1


Query: 23  SSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSN 82
           SS+T+N++++GAKPD KTD +KAF   W  AC +   A+IYVP+G++ L T TF+G C N
Sbjct: 5   SSSTYNVINYGAKPDGKTDSTKAFGNVWAKACSSPYPASIYVPQGKFLLGTATFSGKCIN 64

Query: 83  NDITMHVDGTLVAPSDYGVE----NWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKS-C 142
             I++ +DGTLVA S+Y V     NW+ F+HVDGVS+ GG+LDGQG  LWDCKNS KS C
Sbjct: 65  KAISITIDGTLVASSNYRVTGKNGNWLKFQHVDGVSIRGGLLDGQGTALWDCKNSDKSNC 124

Query: 143 PLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVA 202
           P+GAT+LEFSNSKNI++SGLTS+NSQMFHIV NGC+NVKMQG+ I AAGNSPNTDGIHV 
Sbjct: 125 PIGATTLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNTDGIHVQ 184

Query: 203 LSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTV 262
           +SS VTI++S I TGDDCIS+GPGTSNLWIEN+ACGPGHGISIGSLG  + E GVQNVTV
Sbjct: 185 MSSHVTIVNSKIRTGDDCISIGPGTSNLWIENIACGPGHGISIGSLGWKLNEPGVQNVTV 244

Query: 263 KTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVS 322
           KT TFT TQNGVRIK+WG+PS GF RNI FQD IM NVQNPI+IDQNYCPNNKGCPGQ S
Sbjct: 245 KTVTFTGTQNGVRIKSWGRPSNGFVRNIFFQDAIMVNVQNPIVIDQNYCPNNKGCPGQAS 304

Query: 323 GVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTA 382
           G+++S V+YQNIHGTSATQVA+KFDCSSK+PC GI ++DVKL+YKN VAEASC++A G A
Sbjct: 305 GIKVSGVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKDVKLTYKNQVAEASCNHAGGAA 364

Query: 383 AGLVQPSSCL 388
            G VQP SCL
Sbjct: 365 LGSVQPESCL 374

[Close]

BLAST of CmoCh19G003620 vs. TrEMBL
Match: U5G4M7_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0008s01120g PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 2.9e-153
Identity = 256/368 (69.57%), Postives = 310/368 (84.24%), Query Frame = 1


Query: 24  STTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSNN 83
           S  ++++ +GAKPD KTD +KAF  AW+ AC ++  AT+YVPKG + LS   F GPC NN
Sbjct: 2   SAKYSVLSYGAKPDGKTDSTKAFAAAWSQACASTKPATLYVPKGIFSLSQVIFQGPCKNN 61

Query: 84  DITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPL 143
            I + V G+LVAPSDYG+    +NW+ F HV+GV++ GG LDGQGAGLW CK S KSCP 
Sbjct: 62  AILVSVAGSLVAPSDYGLIGGAKNWLVFEHVNGVTLSGGTLDGQGAGLWSCKKSGKSCPS 121

Query: 144 GATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVALS 203
           GATSLEFSNS NI+++GLTSLNSQMFHIV N CQNVK++G+++SAAGNSPNTDGIHV+ S
Sbjct: 122 GATSLEFSNSNNIVITGLTSLNSQMFHIVINACQNVKVKGVRVSAAGNSPNTDGIHVSSS 181

Query: 204 SQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKT 263
           + VTI++S I TGDDC+S+GPGTSNLWIENVACGPGHGISIGSLG+DV+E GVQNVTVKT
Sbjct: 182 TSVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGQDVQEAGVQNVTVKT 241

Query: 264 TTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGV 323
           TTFT T+NGVRIK+WG+PS GFARNILFQ  +MNNVQNPIIIDQNYCP NK CPGQ SGV
Sbjct: 242 TTFTGTENGVRIKSWGRPSNGFARNILFQHAVMNNVQNPIIIDQNYCPGNKNCPGQASGV 301

Query: 324 EISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTAAG 383
           +IS+V+YQ+IHG+SA ++A+KFDCS K+PC GI LED+ L+Y+N  AEASC+NA G A+G
Sbjct: 302 QISDVTYQDIHGSSAKEIAVKFDCSKKYPCTGIKLEDINLTYQNQPAEASCTNARGAASG 361

Query: 384 LVQPSSCL 388
           LVQP+SCL
Sbjct: 362 LVQPTSCL 369

[Close]

BLAST of CmoCh19G003620 vs. TrEMBL
Match: M5VW01_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007271mg PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 2.9e-153
Identity = 262/371 (70.62%), Postives = 305/371 (82.21%), Query Frame = 1


Query: 21  SVSSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPC 80
           + +  T+++   GA  D KTD +K F  AW+ AC +   A IYVP GR+ +    F+GPC
Sbjct: 5   NAADLTYSVTSLGAIADGKTDSTKVFLSAWSKACASVQPAVIYVPAGRFLVQNAAFSGPC 64

Query: 81  SNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKS 140
            NN IT  +DGTLVAPSDY V     NWI F HV+GV++ GG+LDGQG GLW CK S KS
Sbjct: 65  KNNAITFRIDGTLVAPSDYRVIGNAGNWILFEHVNGVTISGGLLDGQGTGLWACKASTKS 124

Query: 141 CPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHV 200
           CP GAT+L FS+S NI+V+GL SLNSQMFHIV NGCQNVKMQG+K+SA+GNSPNTDGIHV
Sbjct: 125 CPRGATTLGFSSSNNIVVNGLASLNSQMFHIVINGCQNVKMQGVKVSASGNSPNTDGIHV 184

Query: 201 ALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVT 260
            +SS+VTI++S I+TGDDC+S+GPGT+NLWIENVACGPGHGISIGSLGKD +EDGVQNVT
Sbjct: 185 QMSSEVTILNSKIATGDDCVSIGPGTTNLWIENVACGPGHGISIGSLGKDSQEDGVQNVT 244

Query: 261 VKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQV 320
           VKT TFT TQNGVRIK+WG+PS GFARNILFQ I+  NVQNPI+IDQNYCP NKGCPGQV
Sbjct: 245 VKTVTFTGTQNGVRIKSWGRPSTGFARNILFQHIVNVNVQNPIVIDQNYCPGNKGCPGQV 304

Query: 321 SGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGT 380
           SGV+IS+V YQ+IHGTSATQVA+KFDCSSK+PC GI LEDVKL+YKN  AEASC  A GT
Sbjct: 305 SGVKISDVIYQDIHGTSATQVAVKFDCSSKYPCSGIKLEDVKLTYKNQAAEASCKYAGGT 364

Query: 381 AAGLVQPSSCL 388
           AAG VQP+SCL
Sbjct: 365 AAGTVQPTSCL 375

[Close]

BLAST of CmoCh19G003620 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-140
Identity = 242/383 (63.19%), Postives = 300/383 (78.33%), Query Frame = 1


Query: 10  LLPLFFFFFFFSVSSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRY 69
           LL LF FFF  S S+ ++N++ FGAKPD KTD +KAF   W +AC +S   TI VPKGR+
Sbjct: 4   LLVLFVFFFISSCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRF 63

Query: 70  YLSTTTFNGP-CSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQG 129
            L + TF+G  C    +T  +DGTLVAP+DY V    + WI F+H+DG++V+GGVLD +G
Sbjct: 64  LLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARG 123

Query: 130 AGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISA 189
           A LWDCK S K+CP GAT++ F +S N++VSGLTSLNSQMFH+V NGC NVK+QG+K+ A
Sbjct: 124 ASLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLA 183

Query: 190 AGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLG 249
           AGNSPNTDGIHV  SS V+I ++ ISTGDDC+S+GPGT+ LWIENVACGPGHGISIGSLG
Sbjct: 184 AGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLG 243

Query: 250 KDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQN 309
           KD  E GVQNVTVKT TFT T NGVRIK+W +PS GFA+NI FQ  +MNNV+NPIIIDQN
Sbjct: 244 KDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQN 303

Query: 310 YCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKND 369
           YCP++  CP QVSG++IS+V + +IHGTSAT+V +K DCSSK PC GI LEDVKL+Y+N 
Sbjct: 304 YCPDHD-CPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNK 363

Query: 370 VAEASCSNADGTAAGLVQPSSCL 388
            A ++C++A G  AG  QP +CL
Sbjct: 364 PAASACTHAGGIEAGFFQP-NCL 384

[Close]

BLAST of CmoCh19G003620 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 494.2 bits (1271), Expect = 7.3e-140
Identity = 237/384 (61.72%), Postives = 295/384 (76.82%), Query Frame = 1


Query: 9   ILLPLFFFFFFFSVSSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGR 68
           +L+ L F     S S+ T+NI+ +GAKPD KTD +KAF   W  AC +    TI VPKGR
Sbjct: 5   LLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGR 64

Query: 69  YYLSTTTFNGP-CSNNDITMHVDGTLVAPSDY---GVEN-WITFRHVDGVSVFGGVLDGQ 128
           + L +  F+G  C    +T  + GTLVAPSDY   G EN WI F+H+DG+SV+GGVLD Q
Sbjct: 65  FLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQ 124

Query: 129 GAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKIS 188
           GA LW CK S K+CP GATS+ F +S+N+++SGLTSLNSQMFH+  NGC NVK+ G+K+S
Sbjct: 125 GASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVS 184

Query: 189 AAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSL 248
           A GNSPNTDGIHV  SS V+I++S ISTGDDC+S+GPGT+ LWIENVACGPGHGISIGSL
Sbjct: 185 ADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSL 244

Query: 249 GKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQ 308
           GK+  E GVQN+TVKT TFT T+NGVRIK+W +PS GFA+NI FQ  +MNNVQNPI+IDQ
Sbjct: 245 GKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQ 304

Query: 309 NYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKN 368
           NYCP N+ CP QVSG++IS+V + +IHGTSAT+V +K DCSSK PC GI ++DVKL+Y+N
Sbjct: 305 NYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRN 364

Query: 369 DVAEASCSNADGTAAGLVQPSSCL 388
             A   CS+A G+ AG  +P+SCL
Sbjct: 365 KPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of CmoCh19G003620 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 415.6 bits (1067), Expect = 3.3e-116
Identity = 201/383 (52.48%), Postives = 269/383 (70.23%), Query Frame = 1


Query: 13  LFFFFFFFSVS---STTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRY 72
           LF    F  VS   S  FN+V FGAKPD  TD + AF +AW  AC ++++AT+ VPKG +
Sbjct: 11  LFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTF 70

Query: 73  YLSTTTFNGPCSNNDITMHVDGTLVAPSDYGVEN----WITFRHVDGVSVFGGVLDGQGA 132
            L   TF GPC +  IT  V GT++AP DY        WI F  V+  S+ GG  D +  
Sbjct: 71  LLKVITFGGPCKSK-ITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARAN 130

Query: 133 GLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAA 192
           G W C+ S ++CP G  S+ F+++K++I+SG+ S+NSQ+ H+  NGC NV ++ +K+ A 
Sbjct: 131 GFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAP 190

Query: 193 GNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGK 252
           GNSPNTDG HV  S+ VT   S++ TGDDC+++GPGT NL I  +ACGPGHG+SIGSL K
Sbjct: 191 GNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAK 250

Query: 253 DVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNY 312
           +++EDGV+NVTV ++ FT +QNGVRIK+W +PS GF R + FQD++M NV+NPIIIDQNY
Sbjct: 251 ELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNY 310

Query: 313 CPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSY-KND 372
           CP ++GCP + SGV+IS V+Y+NI GTSATQ AMK  CS   PC GITL+D+KL+Y K  
Sbjct: 311 CPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGT 370

Query: 373 VAEASCSNADGTAAGLVQPSSCL 388
            A + C NA G + G++QP+SCL
Sbjct: 371 PATSFCFNAVGKSLGVIQPTSCL 392

[Close]

BLAST of CmoCh19G003620 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 411.0 bits (1055), Expect = 8.2e-115
Identity = 202/385 (52.47%), Postives = 268/385 (69.61%), Query Frame = 1


Query: 10  LLPLFFFFFFFSVSSTT---FNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPK 69
           +L +FF  F    SST    +N+V FGAKPD +TD +KAF  AW +ACR++ A T+ VP+
Sbjct: 9   VLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPR 68

Query: 70  GRYYLSTTTFNGPCSNNDITMHVDGTLVAPSDY-GVEN---WITFRHVDGVSVFGGVLDG 129
           G + L    F GPC +  IT  + GT+VAPSDY G+ N   WI F  V+ +S+ GG LD 
Sbjct: 69  GSFLLKPVEFRGPCRSR-ITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDA 128

Query: 130 QGAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKI 189
           +GA  W C+ S KSCP+GA S+ F+ + +++VSGLTS+NSQ  H+V N C NV ++ +K+
Sbjct: 129 RGASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKL 188

Query: 190 SAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGS 249
            A   SPNTDG+HV  S+ VT+   +  TGDDCIS+GPGT NL++  + CGPGHGISIGS
Sbjct: 189 VAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGS 248

Query: 250 LGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIID 309
           LG+D  E GV+N+T+  + F+ + NGVRIKTW + S GF RN+LFQ++IM NVQNPII+D
Sbjct: 249 LGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVD 308

Query: 310 QNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYK 369
           QNYCP+N+GCP Q SGV+IS V Y+NI GTS TQ A+ FDCS   PC+ I L D+KL++ 
Sbjct: 309 QNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFN 368

Query: 370 NDVAEASCSNADGTAAGLVQPSSCL 388
              A ++C N  G  AG+V P  CL
Sbjct: 369 GRSATSTCKNIKGVKAGVVMPQGCL 392

[Close]

BLAST of CmoCh19G003620 vs. TAIR10
Match: AT1G05650.1 (AT1G05650.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 409.1 bits (1050), Expect = 3.1e-114
Identity = 201/388 (51.80%), Postives = 269/388 (69.33%), Query Frame = 1


Query: 9   ILLPLFFFFFFF----SVSSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYV 68
           I  PL F    F    S +S  FN+V FGAKPD  TD + AF +AW  AC ++ +AT+ V
Sbjct: 6   ITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVV 65

Query: 69  PKGRYYLSTTTFNGPCSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVL 128
           P G + L   TF GPC +  IT  V GT+VAP DY       +WI F  V+  S+ GG  
Sbjct: 66  PTGTFLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTF 125

Query: 129 DGQGAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGI 188
           D +G+G W C+ S ++CP G  S+ F+++K++I+SG+ S+NSQ+ H+  NGC NV ++ I
Sbjct: 126 DARGSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNI 185

Query: 189 KISAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISI 248
           ++ A G+SPNTDG  V  S+ VT+  S++ TGDDC+++G GT N  I  +ACGPGHG+SI
Sbjct: 186 RLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSI 245

Query: 249 GSLGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPII 308
           GSL K + EDGV+NVTV ++ FT +QNGVRIK+W +PS GF RN+ FQ++IM NVQNPII
Sbjct: 246 GSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPII 305

Query: 309 IDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLS 368
           IDQNYCP+N+GCP + SGV+I+ V+Y+NI GTSATQ AMK  CS   PC GITL+D+KL+
Sbjct: 306 IDQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLT 365

Query: 369 Y-KNDVAEASCSNADGTAAGLVQPSSCL 388
           Y K   A + C NA G   G++QP+SCL
Sbjct: 366 YNKGTPATSLCFNAVGKNLGVIQPTSCL 392

[Close]

BLAST of CmoCh19G003620 vs. NCBI nr
Match: gi|449442581|ref|XP_004139060.1| (PREDICTED: polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 609.8 bits (1571), Expect = 3.4e-171
Identity = 296/380 (77.89%), Postives = 342/380 (90.00%), Query Frame = 1


Query: 13  LFFFFFFFSVSS-TTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYL 72
           LFF F F +++S +TFN+VDFGAKP+ +TD S+AFE AW SACRA TA +IYVPKGR+Y+
Sbjct: 7   LFFPFLFLTLASASTFNVVDFGAKPNVQTDSSQAFEAAWASACRARTAVSIYVPKGRFYV 66

Query: 73  STTTFNGPCSNNDITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQGAGL 132
           ++  F GPC+NNDIT+ +DGTL+APS+YGV     NWITFR VDGV++FGGVLD QG+GL
Sbjct: 67  ASLAFEGPCNNNDITIRIDGTLLAPSNYGVIANSGNWITFRRVDGVTLFGGVLDAQGSGL 126

Query: 133 WDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGN 192
           W CKNS  SCP GATSLEFSNSKNI+VSGLTSLNSQMFHIV NGCQNVK QG+K+SAAGN
Sbjct: 127 WACKNSKSSCPPGATSLEFSNSKNIMVSGLTSLNSQMFHIVINGCQNVKAQGLKVSAAGN 186

Query: 193 SPNTDGIHVALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDV 252
           SPNTDGIHVALSS VTI++S I TGDDCIS+GPGTSNLWIENVACGPGHGISIGSLG++V
Sbjct: 187 SPNTDGIHVALSSTVTILNSIIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGREV 246

Query: 253 EEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCP 312
           +EDGV+NVTVK+ TFTNTQNGVRIKTWGKPS GFAR+++FQDI+M NV+NPIIIDQNYCP
Sbjct: 247 QEDGVENVTVKSATFTNTQNGVRIKTWGKPSNGFARSVIFQDIVMVNVENPIIIDQNYCP 306

Query: 313 NNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAE 372
           +NKGCPGQ SGV+IS+V+Y+NIHGTSATQVAMKFDCSSKFPC  ITLEDVKLS KN+ AE
Sbjct: 307 DNKGCPGQDSGVKISDVTYRNIHGTSATQVAMKFDCSSKFPCSDITLEDVKLSCKNEAAE 366

Query: 373 ASCSNADGTAAGLVQPSSCL 388
           ASCS+A+G+AAGLVQPSSCL
Sbjct: 367 ASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of CmoCh19G003620 vs. NCBI nr
Match: gi|702452172|ref|XP_010025870.1| (PREDICTED: polygalacturonase-like [Eucalyptus grandis])

HSP 1 Score: 561.2 bits (1445), Expect = 1.4e-156
Identity = 263/371 (70.89%), Postives = 313/371 (84.37%), Query Frame = 1


Query: 21  SVSSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPC 80
           + +S  +N+V  GAK D KTD SKAF+ AW SAC ++ AA++YVP+GR+ + + +FNGPC
Sbjct: 115 NAASVQYNVVSLGAKADGKTDSSKAFQSAWASACGSTRAASVYVPQGRFLVKSASFNGPC 174

Query: 81  SNNDITMHVDGTLVAPSDYGVEN----WITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKS 140
            N+ IT+ +DGTLVAPS+Y V      WI FRHV GVS+ GG LDGQG GLW CK SHKS
Sbjct: 175 KNSAITVRIDGTLVAPSNYNVNGNARRWIVFRHVTGVSMIGGTLDGQGTGLWACKLSHKS 234

Query: 141 CPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHV 200
           CP+GAT+L  SNS+NI+V GL SLNSQMFHIV NGCQNVKMQG+K+SA+G SPNTDGIHV
Sbjct: 235 CPIGATNLLISNSQNILVRGLRSLNSQMFHIVINGCQNVKMQGVKVSASGTSPNTDGIHV 294

Query: 201 ALSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVT 260
             S+ VTI++S I TGDDC+S+GPG++NLWIENVACGPGHGISIGSLGK  +EDGVQNVT
Sbjct: 295 GASTGVTILNSKIGTGDDCVSIGPGSNNLWIENVACGPGHGISIGSLGKTQQEDGVQNVT 354

Query: 261 VKTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQV 320
           VKT TFT TQNGVRIK+WG+PS GFARNILFQ  IMNNVQNPIIIDQNYCP+N GCPGQ 
Sbjct: 355 VKTVTFTGTQNGVRIKSWGRPSNGFARNILFQHAIMNNVQNPIIIDQNYCPHNSGCPGQA 414

Query: 321 SGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGT 380
           SGV +S+V+YQ+IHGTSAT VA+KFDCSSK+PC GI ++DVKL+Y+N VA ASC++ADGT
Sbjct: 415 SGVRVSDVTYQDIHGTSATSVAVKFDCSSKYPCTGIRMQDVKLTYRNKVATASCAHADGT 474

Query: 381 AAGLVQPSSCL 388
           A+GLVQPSSCL
Sbjct: 475 ASGLVQPSSCL 485

[Close]

BLAST of CmoCh19G003620 vs. NCBI nr
Match: gi|629091489|gb|KCW57484.1| (hypothetical protein EUGRSUZ_H00254, partial [Eucalyptus grandis])

HSP 1 Score: 558.9 bits (1439), Expect = 6.9e-156
Identity = 262/365 (71.78%), Postives = 310/365 (84.93%), Query Frame = 1


Query: 27  FNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSNNDIT 86
           +N+V  GAK D KTD SKAF+ AW SAC ++ AA++YVP+GR+ + + +FNGPC N+ IT
Sbjct: 2   YNVVSLGAKADGKTDSSKAFQSAWASACGSTRAASVYVPQGRFLVKSASFNGPCKNSAIT 61

Query: 87  MHVDGTLVAPSDYGVEN----WITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPLGAT 146
           + +DGTLVAPS+Y V      WI FRHV GVS+ GG LDGQG GLW CK SHKSCP+GAT
Sbjct: 62  VRIDGTLVAPSNYNVNGNARRWIVFRHVTGVSMIGGTLDGQGTGLWACKLSHKSCPIGAT 121

Query: 147 SLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVALSSQV 206
           +L  SNS+NI+V GL SLNSQMFHIV NGCQNVKMQG+K+SA+G SPNTDGIHV  S+ V
Sbjct: 122 NLLISNSQNILVRGLRSLNSQMFHIVINGCQNVKMQGVKVSASGTSPNTDGIHVGASTGV 181

Query: 207 TIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKTTTF 266
           TI++S I TGDDC+S+GPG++NLWIENVACGPGHGISIGSLGK  +EDGVQNVTVKT TF
Sbjct: 182 TILNSKIGTGDDCVSIGPGSNNLWIENVACGPGHGISIGSLGKTQQEDGVQNVTVKTVTF 241

Query: 267 TNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGVEIS 326
           T TQNGVRIK+WG+PS GFARNILFQ  IMNNVQNPIIIDQNYCP+N GCPGQ SGV +S
Sbjct: 242 TGTQNGVRIKSWGRPSNGFARNILFQHAIMNNVQNPIIIDQNYCPHNSGCPGQASGVRVS 301

Query: 327 NVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTAAGLVQ 386
           +V+YQ+IHGTSAT VA+KFDCSSK+PC GI ++DVKL+Y+N VA ASC++ADGTA+GLVQ
Sbjct: 302 DVTYQDIHGTSATSVAVKFDCSSKYPCTGIRMQDVKLTYRNKVATASCAHADGTASGLVQ 361

Query: 387 PSSCL 388
           PSSCL
Sbjct: 362 PSSCL 366

[Close]

BLAST of CmoCh19G003620 vs. NCBI nr
Match: gi|922363278|ref|XP_003607860.2| (polygalacturonase [Medicago truncatula])

HSP 1 Score: 555.1 bits (1429), Expect = 9.9e-155
Identity = 262/370 (70.81%), Postives = 310/370 (83.78%), Query Frame = 1


Query: 23  SSTTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSN 82
           SS+T+N++++GAKPD KTD +KAF   W  AC +   A+IYVP+G++ L T TF+G C N
Sbjct: 5   SSSTYNVINYGAKPDGKTDSTKAFGNVWAKACSSPYPASIYVPQGKFLLGTATFSGKCIN 64

Query: 83  NDITMHVDGTLVAPSDYGVE----NWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKS-C 142
             I++ +DGTLVA S+Y V     NW+ F+HVDGVS+ GG+LDGQG  LWDCKNS KS C
Sbjct: 65  KAISITIDGTLVASSNYRVTGKNGNWLKFQHVDGVSIRGGLLDGQGTALWDCKNSDKSNC 124

Query: 143 PLGATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVA 202
           P+GAT+LEFSNSKNI++SGLTS+NSQMFHIV NGC+NVKMQG+ I AAGNSPNTDGIHV 
Sbjct: 125 PIGATTLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNTDGIHVQ 184

Query: 203 LSSQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTV 262
           +SS VTI++S I TGDDCIS+GPGTSNLWIEN+ACGPGHGISIGSLG  + E GVQNVTV
Sbjct: 185 MSSHVTIVNSKIRTGDDCISIGPGTSNLWIENIACGPGHGISIGSLGWKLNEPGVQNVTV 244

Query: 263 KTTTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVS 322
           KT TFT TQNGVRIK+WG+PS GF RNI FQD IM NVQNPI+IDQNYCPNNKGCPGQ S
Sbjct: 245 KTVTFTGTQNGVRIKSWGRPSNGFVRNIFFQDAIMVNVQNPIVIDQNYCPNNKGCPGQAS 304

Query: 323 GVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTA 382
           G+++S V+YQNIHGTSATQVA+KFDCSSK+PC GI ++DVKL+YKN VAEASC++A G A
Sbjct: 305 GIKVSGVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKDVKLTYKNQVAEASCNHAGGAA 364

Query: 383 AGLVQPSSCL 388
            G VQP SCL
Sbjct: 365 LGSVQPESCL 374

[Close]

BLAST of CmoCh19G003620 vs. NCBI nr
Match: gi|566181683|ref|XP_006379419.1| (hypothetical protein POPTR_0008s01120g, partial [Populus trichocarpa])

HSP 1 Score: 549.7 bits (1415), Expect = 4.2e-153
Identity = 256/368 (69.57%), Postives = 310/368 (84.24%), Query Frame = 1


Query: 24  STTFNIVDFGAKPDSKTDMSKAFEEAWTSACRASTAATIYVPKGRYYLSTTTFNGPCSNN 83
           S  ++++ +GAKPD KTD +KAF  AW+ AC ++  AT+YVPKG + LS   F GPC NN
Sbjct: 2   SAKYSVLSYGAKPDGKTDSTKAFAAAWSQACASTKPATLYVPKGIFSLSQVIFQGPCKNN 61

Query: 84  DITMHVDGTLVAPSDYGV----ENWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPL 143
            I + V G+LVAPSDYG+    +NW+ F HV+GV++ GG LDGQGAGLW CK S KSCP 
Sbjct: 62  AILVSVAGSLVAPSDYGLIGGAKNWLVFEHVNGVTLSGGTLDGQGAGLWSCKKSGKSCPS 121

Query: 144 GATSLEFSNSKNIIVSGLTSLNSQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVALS 203
           GATSLEFSNS NI+++GLTSLNSQMFHIV N CQNVK++G+++SAAGNSPNTDGIHV+ S
Sbjct: 122 GATSLEFSNSNNIVITGLTSLNSQMFHIVINACQNVKVKGVRVSAAGNSPNTDGIHVSSS 181

Query: 204 SQVTIISSSISTGDDCISVGPGTSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKT 263
           + VTI++S I TGDDC+S+GPGTSNLWIENVACGPGHGISIGSLG+DV+E GVQNVTVKT
Sbjct: 182 TSVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGQDVQEAGVQNVTVKT 241

Query: 264 TTFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGV 323
           TTFT T+NGVRIK+WG+PS GFARNILFQ  +MNNVQNPIIIDQNYCP NK CPGQ SGV
Sbjct: 242 TTFTGTENGVRIKSWGRPSNGFARNILFQHAVMNNVQNPIIIDQNYCPGNKNCPGQASGV 301

Query: 324 EISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTAAG 383
           +IS+V+YQ+IHG+SA ++A+KFDCS K+PC GI LED+ L+Y+N  AEASC+NA G A+G
Sbjct: 302 QISDVTYQDIHGSSAKEIAVKFDCSKKYPCTGIKLEDINLTYQNQPAEASCTNARGAASG 361

Query: 384 LVQPSSCL 388
           LVQP+SCL
Sbjct: 362 LVQPTSCL 369

The following BLAST results are available for this feature:

BLAST of CmoCh19G003620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_PRUPE	1.4e-145	66.15	Polygalacturonase OS=Prunus persica PE=2 SV=1	[more]
PGLR6_ARATH	3.8e-106	51.26	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S...	[more]
PGLR2_PLAAC	5.0e-82	42.70	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR_GOSHI	2.1e-80	42.42	Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1	[more]
PGLR_GOSBA	1.4e-79	42.16	Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1	[more]

BLAST of CmoCh19G003620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M095_CUCSA	2.4e-171	77.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627460 PE=3 SV=1	[more]
A0A059AUR6_EUCGR	4.8e-156	71.78	Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H00254 PE=3 ...	[more]
G7JIR7_MEDTR	6.9e-155	70.81	Polygalacturonase OS=Medicago truncatula GN=MTR_4g083660 PE=3 SV=2	[more]
U5G4M7_POPTR	2.9e-153	69.57	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0008s01120g P...	[more]
M5VW01_PRUPE	2.9e-153	70.62	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007271mg PE=3 SV=1	[more]

BLAST of CmoCh19G003620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43870.1	1.5e-140	63.19	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	7.3e-140	61.72	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	3.3e-116	52.48	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	8.2e-115	52.47	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	3.1e-114	51.80	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh19G003620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442581\|ref\|XP_004139060.1\|	3.4e-171	77.89	PREDICTED: polygalacturonase-like [Cucumis sativus]	[more]
gi\|702452172\|ref\|XP_010025870.1\|	1.4e-156	70.89	PREDICTED: polygalacturonase-like [Eucalyptus grandis]	[more]
gi\|629091489\|gb\|KCW57484.1\|	6.9e-156	71.78	hypothetical protein EUGRSUZ_H00254, partial [Eucalyptus grandis]	[more]
gi\|922363278\|ref\|XP_003607860.2\|	9.9e-155	70.81	polygalacturonase [Medicago truncatula]	[more]
gi\|566181683\|ref\|XP_006379419.1\|	4.2e-153	69.57	hypothetical protein POPTR_0008s01120g, partial [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0016829	lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003620.1	CmoCh19G003620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 54..375 score: 7.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 229..242 scor
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 172..198 score: 510.0coord: 252..273 score: 26.0coord: 316..356 score: 10000.0coord: 282..303 score: 6300.0coord: 199..220 score: 1200.0coord: 222..242 score: 22
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 14..387 score: 2.84E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 10..386 score: 1.6E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..387 score: 1.9E
None	No IPR available	PANTHER	PTHR31375:SF2	POLYGALACTURONASE/PECTINASE	coord: 1..387 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003620	CmaCh11G015790	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003620	CmaCh19G003190	Cucurbita maxima (Rimu)	cmacmoB509
CmoCh19G003620	ClCG09G013910	Watermelon (Charleston Gray)	cmowcgB452

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G003620	CmoCh11G015410	Cucurbita moschata (Rifu)	cmocmoB109

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003620	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003620	Cucurbita maxima (Rimu)	cmacmoB510
CmoCh19G003620	Cucurbita maxima (Rimu)	cmacmoB511
CmoCh19G003620	Cucurbita pepo (Zucchini)	cmocpeB481