CmoCh12G001710 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G001710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc ion-binding protein
LocationCmo_Chr12 : 1133639 .. 1134251 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTTCATGATTTTAATACCCATTTCTTGTTCTTGCTGTTCGTCTCAGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA

mRNA sequence

ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA

Coding sequence (CDS)

ATGACATCAACCGGAGCAGCACCCGCCAGTTCGCCGTCGGAAGCAGAGTGCTGCATGTGCGGAGATTTCGGCTTCTCCGACGAGCTTTTCCGGTGCAAAATCTGCCAATTCAGATCCCAACACAGGCAATTTCCTTCAAATTCTTTGTGTTTGTTCTTAATTGGGTACTGTAGCAATTTGTACCCAAAAGCCGATTGTTACAGAATATGCAATTGGTGTCTAACTCAAAAGGAGGAATCCAAAGCCAAATCCCCAAATTCTTCCAATTCTTCTTCCTTAACCACTCGAGATGATCACTCCTCGATCAAAACCCCCCGAAACAAGGATCAAATTCGCACTTTTCTACCCCTACAAACCAGACCCATCAAAAAACAGAGGTCGCCGGAAGCTTCTGAACGTCCACAACCACCGCCACCGCCGCCGCCTCGGAGAAAACCAATCGCCGTGGAGGACAATCTCCGGCGGACGAGATCGGAGGAGATTTCTCACCGGAGTGGAATCCAACGGCCGGTGATTTTCCGGAACAAGGTGAGAAGGTACAAACTTCTTGACGAGGTTTCCAGCTGA
Homology
[Close]
BLAST of CmoCh12G001710 vs. TrEMBL
Match: A0A0A0LLR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G369840 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.5e-50
Identity = 112/178 (62.92%), Postives = 123/178 (69.10%), Query Frame = 1 

Query: 11  SPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPKADCYRIC 70
           S S++ECCMCGDFGFS ELF CKICQFRSQHR             YCSNLYPKADCYRIC
Sbjct: 4   SKSQSECCMCGDFGFSFELFHCKICQFRSQHR-------------YCSNLYPKADCYRIC 63

Query: 71  NWCLTQKEESKAKSPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEA 130
           NWCLT  +ES  KSPNSS+S                N DQ   F     +PIKKQ S   
Sbjct: 64  NWCLTLNQESNPKSPNSSSS-------------IINNNDQFPNFRSQLNKPIKKQSSSSL 123

Query: 131 SERPQPPPPPPPRRKPIAVEDNLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
              P PPPPPPPRR+ I+V++ LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 124 VILPPPPPPPPPRRRLISVDEKLRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 155

[Close]
BLAST of CmoCh12G001710 vs. TrEMBL
Match: M5Y0I7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011180mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 107/226 (47.35%), Postives = 131/226 (57.96%), Query Frame = 1 

Query: 3   STGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYP 62
           +T AA A++    ECCMCGDFGFS ELF+CK+CQFRSQHR             YCSNLYP
Sbjct: 7   TTAAAAAAAQPTHECCMCGDFGFSYELFQCKVCQFRSQHR-------------YCSNLYP 66

Query: 63  KADCYRICNWCLTQKEESKAKSPNSSNSSSLTTRD--DH---------SSIKTPRNKDQ- 122
            A+ YRICNWCLTQKE++K KS NSSNSSS   ++  DH         +S KT  ++++ 
Sbjct: 67  NAESYRICNWCLTQKEDTKEKSQNSSNSSSSCRKEGQDHDPAKINKKTNSSKTSDHQNKQ 126

Query: 123 ---------IRTFLPLQ-TRPIKKQR------------SPEASERPQPPPPPPPRRKPIA 182
                    +R  + LQ + PIKKQR            S   S  P P P  P  RK I 
Sbjct: 127 GHGGNSYGGLRGTMQLQPSGPIKKQRPLDLHHNHQGFGSASPSPSPSPSPKSPSTRKRIL 186

Query: 183 VE-----DNLRRTRSEEISH-RSGIQRPVIFRNKVRRYKLLDEVSS 189
                  + +RRTRSE+IS+  +GI    +FRNKVRRYKLLDEVSS
Sbjct: 187 TNGQKEAEKIRRTRSEDISNLNNGIITRQVFRNKVRRYKLLDEVSS 219

[Close]
BLAST of CmoCh12G001710 vs. TrEMBL
Match: C6SWE1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G212100 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 104/216 (48.15%), Postives = 126/216 (58.33%), Query Frame = 1 

Query: 1   MTSTGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNL 60
           MT+ G    S P+  ECCMCGD GFSD+LF+CK CQFRSQHR             YCSNL
Sbjct: 1   MTTKGTTH-SEPNNTECCMCGDLGFSDQLFQCKACQFRSQHR-------------YCSNL 60

Query: 61  YPKADCYRICNWCLTQKEESKAKSPNSSN-SSSLTTRDDHSSIKTPRNKDQIR------- 120
           YPK +    CNWCL+Q+E++K +S NSSN SSS+   DD S IK  RN +          
Sbjct: 61  YPKPESLGTCNWCLSQREDTKERSTNSSNSSSSIRNNDDESRIKRIRNGNSYNSAQNIGP 120

Query: 121 -------TFLPLQT-RPIKKQRSPEASERPQPPPPPPPRRKPIAV------------EDN 180
                  + L LQ  +PIKK +SPE+S  P      PP+  P+ V            E+ 
Sbjct: 121 VKKGVKGSVLHLQIHKPIKKPKSPESSRSPS-ASNSPPKSSPVLVSTRKRIVTNGTLEER 180

Query: 181 LRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
           LRRTRSE+I+ RSG  + V FRNKVRRYKLLDEVSS
Sbjct: 181 LRRTRSEDIT-RSGATKQV-FRNKVRRYKLLDEVSS 199

[Close]
BLAST of CmoCh12G001710 vs. TrEMBL
Match: A0A0B2QX13_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_019444 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 104/216 (48.15%), Postives = 126/216 (58.33%), Query Frame = 1 

Query: 1   MTSTGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNL 60
           MT+ G    S P+  ECCMCGD GFSD+LF+CK CQFRSQHR             YCSNL
Sbjct: 1   MTTKGTTH-SEPNNTECCMCGDLGFSDQLFQCKACQFRSQHR-------------YCSNL 60

Query: 61  YPKADCYRICNWCLTQKEESKAKSPNSSN-SSSLTTRDDHSSIKTPRNKDQIR------- 120
           YPK +    CNWCL+Q+E++K +S NSSN SSS+   DD S IK  RN +          
Sbjct: 61  YPKPESLGTCNWCLSQREDTKERSTNSSNSSSSIRNNDDESRIKRIRNGNSYNSAQNIGP 120

Query: 121 -------TFLPLQT-RPIKKQRSPEASERPQPPPPPPPRRKPIAV------------EDN 180
                  + L LQ  +PIKK +SPE+S  P      PP+  P+ V            E+ 
Sbjct: 121 VKKGVKGSVLHLQIHKPIKKPKSPESSRSPS-ASNSPPKSSPVLVSTRKRIVTNGTLEER 180

Query: 181 LRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
           LRRTRSE+I+ RSG  + V FRNKVRRYKLLDEVSS
Sbjct: 181 LRRTRSEDIT-RSGATKQV-FRNKVRRYKLLDEVSS 199

[Close]
BLAST of CmoCh12G001710 vs. TrEMBL
Match: I1MAY6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G179800 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-33
Identity = 106/214 (49.53%), Postives = 126/214 (58.88%), Query Frame = 1 

Query: 1   MTSTGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNL 60
           MT+ G    S P+  ECCMCGD GFSD+LF+CK+CQFRSQHR             YCSNL
Sbjct: 1   MTTKGTTH-SKPNNTECCMCGDLGFSDQLFQCKVCQFRSQHR-------------YCSNL 60

Query: 61  YPKADCYRICNWCLTQKEESKAKSPNSSN-SSSLTTRDDHSSIKTPRN------------ 120
           YPK +    CNWCL+Q+E++K KS NSSN SSS+   DD    K  RN            
Sbjct: 61  YPKPESLGTCNWCLSQREDTKEKSTNSSNSSSSIRNNDDERRYKRIRNGNNNSAQNIGPV 120

Query: 121 -KDQIRTFLPLQ-TRPIKKQRSPEASERPQPPPPPP-------PRRKPI----AVEDNLR 180
            K+   + L LQ  +PIKK +SPE+S  P     PP         RK I    A+E+ LR
Sbjct: 121 KKEVKGSVLHLQIQKPIKKPKSPESSRSPSASNSPPKSSLVLVSTRKRIVTNGALEERLR 180

Query: 181 RTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
           RTRSE I+ RSG  + V FRNKVRRYKLLDEVSS
Sbjct: 181 RTRSENIT-RSGTTKQV-FRNKVRRYKLLDEVSS 198

[Close]
BLAST of CmoCh12G001710 vs. TAIR10
Match: AT1G02070.1 (AT1G02070.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 1 

Query: 14  EAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPK-ADCYRICNW 73
           E  CCMCGD GFSD+LF C  C+ R QH              YCSN Y + A+   IC+W
Sbjct: 2   ERVCCMCGDVGFSDKLFSCGHCRCRFQH-------------SYCSNYYGQFAEPTEICDW 61

Query: 74  CLT--QKEESKAKSPNSSN---SSSLTTRDDHSS 102
           C +  +K  + A+   SS+   SSS+   +D S+
Sbjct: 62  CRSDDRKLSNVARHGGSSSKKPSSSVKYENDFSN 82

[Close]
BLAST of CmoCh12G001710 vs. NCBI nr
Match: gi|449469809|ref|XP_004152611.1| (PREDICTED: uncharacterized protein LOC101216451 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 112/178 (62.92%), Postives = 123/178 (69.10%), Query Frame = 1 

Query: 11  SPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPKADCYRIC 70
           S S++ECCMCGDFGFS ELF CKICQFRSQHR             YCSNLYPKADCYRIC
Sbjct: 4   SKSQSECCMCGDFGFSFELFHCKICQFRSQHR-------------YCSNLYPKADCYRIC 63

Query: 71  NWCLTQKEESKAKSPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPEA 130
           NWCLT  +ES  KSPNSS+S                N DQ   F     +PIKKQ S   
Sbjct: 64  NWCLTLNQESNPKSPNSSSS-------------IINNNDQFPNFRSQLNKPIKKQSSSSL 123

Query: 131 SERPQPPPPPPPRRKPIAVEDNLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
              P PPPPPPPRR+ I+V++ LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 124 VILPPPPPPPPPRRRLISVDEKLRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 155

[Close]
BLAST of CmoCh12G001710 vs. NCBI nr
Match: gi|659088261|ref|XP_008444888.1| (PREDICTED: uncharacterized protein LOC103488103 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 1.0e-48
Identity = 112/179 (62.57%), Postives = 123/179 (68.72%), Query Frame = 1 

Query: 11  SPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPKADCYRIC 70
           S S++ECC CGDFG S ELF CKICQFRSQHR             YCSNLYPKADCYRIC
Sbjct: 4   SKSQSECCTCGDFGLSFELFHCKICQFRSQHR-------------YCSNLYPKADCYRIC 63

Query: 71  NWCLTQKEESKAKSPNSSNSSSLTTRDDHSSIKTPRNKDQIRTFLPLQTRPIKKQRSPE- 130
           NWCLTQ +ES  KSPNSS+S  +             N DQ   F     +PIKKQ S   
Sbjct: 64  NWCLTQNQESNPKSPNSSSSPIIN------------NNDQFPNFRSRLNKPIKKQSSSSL 123

Query: 131 ASERPQPPPPPPPRRKPIAVEDNLRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
               P PPPPPPPRR+ I+V+D LRRTRSEEISHR+GI+RPVIFRNKVRRYKLLDEVSS
Sbjct: 124 VILPPPPPPPPPPRRRLISVDDKLRRTRSEEISHRTGIKRPVIFRNKVRRYKLLDEVSS 157

[Close]
BLAST of CmoCh12G001710 vs. NCBI nr
Match: gi|645225018|ref|XP_008219384.1| (PREDICTED: uncharacterized protein LOC103319606 isoform X1 [Prunus mume])

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 110/225 (48.89%), Postives = 132/225 (58.67%), Query Frame = 1 

Query: 4   TGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYPK 63
           T AA A+ P+  ECCMCGDFGFS ELF+CK+CQFRSQHR             YCSNLYP 
Sbjct: 7   TTAAAAAQPTH-ECCMCGDFGFSYELFQCKVCQFRSQHR-------------YCSNLYPN 66

Query: 64  ADCYRICNWCLTQKEESKAKSPNSSNSSSLTTRD--DH---------SSIKTPRNKDQ-- 123
           A+ YRICNWCLTQKE++K KS NSSNSSS   ++  DH         +S KT  ++++  
Sbjct: 67  AESYRICNWCLTQKEDTKEKSQNSSNSSSSCRKEGQDHDPAKINKKTNSSKTSDHQNKQG 126

Query: 124 --------IRTFLPLQ-TRPIKKQR------------SPEASERPQPPPPPPPRRKPIAV 183
                   +R  + LQ + PIKKQR            SP  S  P P P  P  RK I  
Sbjct: 127 HGGNSYGGLRGTMQLQPSGPIKKQRSLDLHHNHQGFGSPSPSPSPSPSPKSPSTRKRILT 186

Query: 184 E-----DNLRRTRSEEISH-RSGIQRPVIFRNKVRRYKLLDEVSS 189
                 + +RRTRSEEIS+  +GI    +FRNKVRRYKLLDEVSS
Sbjct: 187 NGQKEAEKIRRTRSEEISNLNNGIITRQVFRNKVRRYKLLDEVSS 217

[Close]
BLAST of CmoCh12G001710 vs. NCBI nr
Match: gi|596218046|ref|XP_007223956.1| (hypothetical protein PRUPE_ppa011180mg [Prunus persica])

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 107/226 (47.35%), Postives = 131/226 (57.96%), Query Frame = 1 

Query: 3   STGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNLYP 62
           +T AA A++    ECCMCGDFGFS ELF+CK+CQFRSQHR             YCSNLYP
Sbjct: 7   TTAAAAAAAQPTHECCMCGDFGFSYELFQCKVCQFRSQHR-------------YCSNLYP 66

Query: 63  KADCYRICNWCLTQKEESKAKSPNSSNSSSLTTRD--DH---------SSIKTPRNKDQ- 122
            A+ YRICNWCLTQKE++K KS NSSNSSS   ++  DH         +S KT  ++++ 
Sbjct: 67  NAESYRICNWCLTQKEDTKEKSQNSSNSSSSCRKEGQDHDPAKINKKTNSSKTSDHQNKQ 126

Query: 123 ---------IRTFLPLQ-TRPIKKQR------------SPEASERPQPPPPPPPRRKPIA 182
                    +R  + LQ + PIKKQR            S   S  P P P  P  RK I 
Sbjct: 127 GHGGNSYGGLRGTMQLQPSGPIKKQRPLDLHHNHQGFGSASPSPSPSPSPKSPSTRKRIL 186

Query: 183 VE-----DNLRRTRSEEISH-RSGIQRPVIFRNKVRRYKLLDEVSS 189
                  + +RRTRSE+IS+  +GI    +FRNKVRRYKLLDEVSS
Sbjct: 187 TNGQKEAEKIRRTRSEDISNLNNGIITRQVFRNKVRRYKLLDEVSS 219

[Close]
BLAST of CmoCh12G001710 vs. NCBI nr
Match: gi|351726888|ref|NP_001235862.1| (uncharacterized protein LOC100305727 [Glycine max])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 104/216 (48.15%), Postives = 126/216 (58.33%), Query Frame = 1 

Query: 1   MTSTGAAPASSPSEAECCMCGDFGFSDELFRCKICQFRSQHRQFPSNSLCLFLIGYCSNL 60
           MT+ G    S P+  ECCMCGD GFSD+LF+CK CQFRSQHR             YCSNL
Sbjct: 1   MTTKGTTH-SEPNNTECCMCGDLGFSDQLFQCKACQFRSQHR-------------YCSNL 60

Query: 61  YPKADCYRICNWCLTQKEESKAKSPNSSN-SSSLTTRDDHSSIKTPRNKDQIR------- 120
           YPK +    CNWCL+Q+E++K +S NSSN SSS+   DD S IK  RN +          
Sbjct: 61  YPKPESLGTCNWCLSQREDTKERSTNSSNSSSSIRNNDDESRIKRIRNGNSYNSAQNIGP 120

Query: 121 -------TFLPLQT-RPIKKQRSPEASERPQPPPPPPPRRKPIAV------------EDN 180
                  + L LQ  +PIKK +SPE+S  P      PP+  P+ V            E+ 
Sbjct: 121 VKKGVKGSVLHLQIHKPIKKPKSPESSRSPS-ASNSPPKSSPVLVSTRKRIVTNGTLEER 180

Query: 181 LRRTRSEEISHRSGIQRPVIFRNKVRRYKLLDEVSS 189
           LRRTRSE+I+ RSG  + V FRNKVRRYKLLDEVSS
Sbjct: 181 LRRTRSEDIT-RSGATKQV-FRNKVRRYKLLDEVSS 199

The following BLAST results are available for this feature:
BLAST of CmoCh12G001710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh12G001710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLR8_CUCSA8.5e-5062.92Uncharacterized protein OS=Cucumis sativus GN=Csa_2G369840 PE=4 SV=1[more]
M5Y0I7_PRUPE1.1e-3347.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011180mg PE=4 SV=1[more]
C6SWE1_SOYBN1.9e-3348.15Uncharacterized protein OS=Glycine max GN=GLYMA_02G212100 PE=2 SV=1[more]
A0A0B2QX13_GLYSO1.9e-3348.15Uncharacterized protein OS=Glycine soja GN=glysoja_019444 PE=4 SV=1[more]
I1MAY6_SOYBN2.5e-3349.53Uncharacterized protein OS=Glycine max GN=GLYMA_14G179800 PE=4 SV=1[more]
BLAST of CmoCh12G001710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02070.11.6e-0739.36 unknown protein[more]
BLAST of CmoCh12G001710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469809|ref|XP_004152611.1|1.2e-4962.92PREDICTED: uncharacterized protein LOC101216451 [Cucumis sativus][more]
gi|659088261|ref|XP_008444888.1|1.0e-4862.57PREDICTED: uncharacterized protein LOC103488103 [Cucumis melo][more]
gi|645225018|ref|XP_008219384.1|1.5e-3448.89PREDICTED: uncharacterized protein LOC103319606 isoform X1 [Prunus mume][more]
gi|596218046|ref|XP_007223956.1|1.6e-3347.35hypothetical protein PRUPE_ppa011180mg [Prunus persica][more]
gi|351726888|ref|NP_001235862.1|2.7e-3348.15uncharacterized protein LOC100305727 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G001710.1CmoCh12G001710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33779FAMILY NOT NAMEDcoord: 1..188
score: 1.5
NoneNo IPR availablePANTHERPTHR33779:SF1SUBFAMILY NOT NAMEDcoord: 1..188
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G001710Cucsa.160410Cucumber (Gy14) v1cgycmoB0450
CmoCh12G001710CmaCh12G002170Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G001710Csa2G369840Cucumber (Chinese Long) v2cmocuB160
CmoCh12G001710MELO3C011066Melon (DHL92) v3.5.1cmomeB148
CmoCh12G001710ClCG08G011490Watermelon (Charleston Gray)cmowcgB165
CmoCh12G001710CSPI02G21430Wild cucumber (PI 183967)cmocpiB162
CmoCh12G001710Lsi08G010050Bottle gourd (USVL1VR-Ls)cmolsiB179
CmoCh12G001710Cp4.1LG07g02630Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G001710MELO3C011066.2Melon (DHL92) v3.6.1cmomedB163
CmoCh12G001710CsaV3_2G030080Cucumber (Chinese Long) v3cmocucB0188
CmoCh12G001710Cla97C08G154500Watermelon (97103) v2cmowmbB182
CmoCh12G001710Bhi04G001126Wax gourdcmowgoB0197
CmoCh12G001710Carg22495Silver-seed gourdcarcmoB1111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G001710Cucumber (Chinese Long) v3cmocucB0195
CmoCh12G001710Cucumber (Chinese Long) v3cmocucB0209
CmoCh12G001710Watermelon (97103) v2cmowmbB146
CmoCh12G001710Watermelon (97103) v2cmowmbB151
CmoCh12G001710Wax gourdcmowgoB0218
CmoCh12G001710Cucurbita moschata (Rifu)cmocmoB005
CmoCh12G001710Cucurbita moschata (Rifu)cmocmoB145
CmoCh12G001710Cucurbita moschata (Rifu)cmocmoB151
CmoCh12G001710Cucurbita moschata (Rifu)cmocmoB158
CmoCh12G001710Cucurbita moschata (Rifu)cmocmoB165
CmoCh12G001710Cucumber (Gy14) v1cgycmoB0216
CmoCh12G001710Cucumber (Gy14) v1cgycmoB0854
CmoCh12G001710Cucurbita maxima (Rimu)cmacmoB034
CmoCh12G001710Cucurbita maxima (Rimu)cmacmoB635
CmoCh12G001710Cucurbita maxima (Rimu)cmacmoB767
CmoCh12G001710Cucurbita maxima (Rimu)cmacmoB772
CmoCh12G001710Cucurbita maxima (Rimu)cmacmoB846
CmoCh12G001710Wild cucumber (PI 183967)cmocpiB167
CmoCh12G001710Wild cucumber (PI 183967)cmocpiB180
CmoCh12G001710Cucumber (Chinese Long) v2cmocuB164
CmoCh12G001710Cucumber (Chinese Long) v2cmocuB177
CmoCh12G001710Melon (DHL92) v3.5.1cmomeB159
CmoCh12G001710Melon (DHL92) v3.5.1cmomeB173
CmoCh12G001710Watermelon (Charleston Gray)cmowcgB129
CmoCh12G001710Watermelon (Charleston Gray)cmowcgB140
CmoCh12G001710Watermelon (Charleston Gray)cmowcgB161
CmoCh12G001710Watermelon (97103) v1cmowmB137
CmoCh12G001710Watermelon (97103) v1cmowmB150
CmoCh12G001710Watermelon (97103) v1cmowmB161
CmoCh12G001710Cucurbita pepo (Zucchini)cmocpeB145
CmoCh12G001710Cucurbita pepo (Zucchini)cmocpeB148
CmoCh12G001710Cucurbita pepo (Zucchini)cmocpeB156
CmoCh12G001710Bottle gourd (USVL1VR-Ls)cmolsiB155
CmoCh12G001710Bottle gourd (USVL1VR-Ls)cmolsiB159
CmoCh12G001710Cucumber (Gy14) v2cgybcmoB173
CmoCh12G001710Cucumber (Gy14) v2cgybcmoB274
CmoCh12G001710Cucumber (Gy14) v2cgybcmoB700
CmoCh12G001710Melon (DHL92) v3.6.1cmomedB175
CmoCh12G001710Melon (DHL92) v3.6.1cmomedB191
CmoCh12G001710Silver-seed gourdcarcmoB0078
CmoCh12G001710Silver-seed gourdcarcmoB0082
CmoCh12G001710Silver-seed gourdcarcmoB0544
CmoCh12G001710Silver-seed gourdcarcmoB0868