CmoCh09G001250 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G001250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLisH and RanBPM domains containing protein
LocationCmo_Chr09 : 580173 .. 583500 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTGAAACGAAAGTTAATTGGTTGAGGTAAAAATAAATTTTAAAAAAATGGTCGACGCTGTAACGTCTGTCGTCCATCTTATCCGGAAGTTTTTGCCGGGGCGCGTGAACAAAACTCGCGGTTAAAAAAACTGAATATAGGGCTGCAAAAAATTCCGATACGGAGTCGATCATTTTCATTTTCATTTTCATTTTCGTAGCGCGGAAGTCCAAGACGAAGGGGGCCGATTAGAGAGATCGAAGTACATGGAAAATCTTCCTCCTCTTCGCAACGGCGACTCACAAATCGTGGTCCTCTCCTCCTCCACCGCTCTGTTAACATAGCCTTTCAATCACTCAACTGCTCCATTTCTCGCCGGCCGACGGGTAATCATGGACGTCGATCCTCCTCTCTACGACCTCATCGTGAGTTCTTTTTCCTCTCAATTTCTGATACAGAACTCATCGAACTTCATTGCTTATTCTCTTCAGATTAGTGAAGCACTTGCTCATTTTTGGGCTGTTTCATCGCCATTGCTCTGTTACTTTGTTTCTTGGTCAATTTGTGAAGTTTTAGTTGGACCCTTGACTTTCTTTCACTTGCTATCACAAATACATTTTTCTAACGCTATTGCTCTATCACTTCAAACGAGGACTAGTGAAACAATTGAAATTGCAGTTCCTTGTTCACTTCTATTCTTGTTAATATTTATTTGCTTGTTTAAAGAAACTAGTGTCTGGCATCGGATATCGGACAATCATTTTCTGTTTGCGTTAGTGTTCGACGCTTTAGTCATCTACTGGTTACTTGTTTATGTGGTGACGAGTATGCAATTGGATAGACATTTCATGAATTGCTATTGAGCTCAGATGGTACAAAGTTGTTTGCTTCTAAGTGAGAAATTTCCTTGTCTTTTTCTCTTTGGATGTAGAATAATATTTAATTTCTAACTTCATCTTTTCTTGTGCGATCACCCTCTGAAACTTTGTTATAAGTGAAAAAGAAATTGATATATGTTACCACAATGGTTTGACCAGTTTGATTATTGTTAATCTTATTTACTTGTTGTGCATTCTAAGAACATTTTTCTCACATTTTATGACAGGCTATCAATGATGGTGATATTCAGAACATTGTTCTATCGTACCTTGTTCATAACTGTTATAAAGAAACTGCAGAGTCGTTCGCTAATTGTACTGGGCTTAAGCAGCACACGGATTATCTTGTTCACATGGAAAAAAGAAAAAGTTGGTGAAATTTTCCTCTCTTGCTATATGGGAATTCTGACTGTTTCTTGCTGCACAAATATAAATTTACGTCTGAATGATATTGATTTAGTCGTTTCCTTTTTATAGATAGACTCTTCTGGTATAACTCCTGATGACTTATCTTAGAAATCTCTTGTAAGGAATGATGATCTATTTCCACTGTCTTATAAGTGGCCTTGAGTTTAGAAATAAATTCACTGCAATGCAACTCAGCGTGGATACTGATTTCCCTCAAACAATCTTAATGATATGCATTTAAAATTTATATAATCTTTGAGCTTAGCGTAACTTTAAATTTGTTTGTTTAGCACTAAATCTGATTTTATATTTCCTCAAAATTTGATCTAAAACTTTTGAATCCGATGGTAACTTTTTGTGTTTTCAGGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAAGCCATTGAGTTAACAGAAGAGTTAGCACAGGGTTTACTTGAGAATAATGAGGACCTGCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTATGCTCTAGGAAATGGTGAGCCCCCCGCCATCATTTACGTATCTTATCTTAACCTAACCCATTTCCTGATGCTTGATGGGGCATTCTGTATAACAGGTTATAATGTTTTATCCTCATTCTTGTTTGTTTACATGACAGCACAATGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGGAAGTTGCATAAATATGTGGAAAAACTTGAAGTGCGTAGCTGTATCCTGACTTAGGATATCCTCTTATCTTTTCTGGCATTTCATTTTATCTTTTTTTTCCCCATCATTTCTTTGTTCAGCAGGCTGAACCAGCTTACGTAAATATGTAGAAAAGCTTGAAATACTAATCATTGTGTCATTGTAGGATTTTATGGCCCTCCTTGCTTATGAAGAACCAGAGAAATCTCCAATGTTTCATCTTCTTAGCGTGGATTATCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGGTTTGTTCCAACTTTCATTTCGTGGCTTTATTTGACATTTTCCATAATGCTACAAGGGAGGTGCAATACAGATTTTAAATCTAATCTCCTATATTGTGTGTTCTACTCTGTATTCCTGTGTCTGGGTCGATATTAGCGCATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATCAAGCAGGCGACTGTAGTTAGACACTCCTTAAGCCAAGAGCTAGGCACGGTAATCTGCACGTTGTAAATTTATGTTCTGGTTTGTGTATGCATGTATGTGCGTGTGTGCATGTCTTAACATGTGTGTATTTATTATCAATTGTTTCAATGTGCCATCTGTTTCAGTAATGTGCAACAGATGGTCCGGTTGACTATATTGATTTGGTTTATTTGTAGTATGCTTTTCACTGATGCTAATTGTGCCAGACAAGTAATTTTAGTCAAGGATCATGTCTTTTGCCTGAACAATTGATGCTTTCGAATTATTTCTGAAATTTAGACTTGGTTCTCTTAAGGTTATTAGCTTCTTGTTTCAATTTCTAGATGTTTTATAAATGATTATTACTCAACAGAATTCCATGTTAAGACTTAAGAGACATGTGGGTAGCTAATCTTTCTGGATTTGCAGGATGGGCTTCAATCATTTTCTTTGAGCGATTTTCTGAAGAGCTAATTCAAAGAGTTCGTTCTGGCTCACAGCAACGAGATGCATCCAGCTTCTGATCTTGTTGCCACCCACAGCTGTGGTATGGAAGTTTGGTCTTCTCTTTGTATGCTTTAGGTGCCGTGTAGGCCGTAAACTGAGTCATCTAGGTCCCCTGAGCAAAAGCTCGTTTCCTTTCACTTTGGTGACCTAGTTGTTCTAATGCCTTGTATTGTGTTTGTACATGCTGTCTCTAATTTTGCTGCTTGATTTTTTCTTTTGTTTTTTTTTTCCCCCAAAATTTATGTGTATCGAGATATTGGCTCAGTCATAGTCCGGTTTGTGGGAGAAGCTTTACTTTATTCATAAGATAGGCTTAGACCCTCCTTGGGACTTGACTTACTTTTTCATCGAATACTTTATAGATTCGAAAGTATTTG

mRNA sequence

GGGTGAAACGAAAGTTAATTGGTTGAGGTAAAAATAAATTTTAAAAAAATGGTCGACGCTGTAACGTCTGTCGTCCATCTTATCCGGAAGTTTTTGCCGGGGCGCGTGAACAAAACTCGCGGTTAAAAAAACTGAATATAGGGCTGCAAAAAATTCCGATACGGAGTCGATCATTTTCATTTTCATTTTCATTTTCGTAGCGCGGAAGTCCAAGACGAAGGGGGCCGATTAGAGAGATCGAAGTACATGGAAAATCTTCCTCCTCTTCGCAACGGCGACTCACAAATCGTGGTCCTCTCCTCCTCCACCGCTCTGTTAACATAGCCTTTCAATCACTCAACTGCTCCATTTCTCGCCGGCCGACGGGTAATCATGGACGTCGATCCTCCTCTCTACGACCTCATCGCTATCAATGATGGTGATATTCAGAACATTGTTCTATCGTACCTTGTTCATAACTGTTATAAAGAAACTGCAGAGTCGTTCGCTAATTGTACTGGGCTTAAGCAGCACACGGATTATCTTGTTCACATGGAAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAAGCCATTGAGTTAACAGAAGAGTTAGCACAGGGTTTACTTGAGAATAATGAGGACCTGCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTATGCTCTAGGAAATGCACAATGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGGAAGTTGCATAAATATGTGGAAAAACTTGAAGATTTTATGGCCCTCCTTGCTTATGAAGAACCAGAGAAATCTCCAATGTTTCATCTTCTTAGCGTGGATTATCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGCGCATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATCAAGCAGGCGACTGTAGTTAGACACTCCTTAAGCCAAGAGCTAGGCACGGATGGGCTTCAATCATTTTCTTTGAGCGATTTTCTGAAGAGCTAATTCAAAGAGTTCGTTCTGGCTCACAGCAACGAGATGCATCCAGCTTCTGATCTTGTTGCCACCCACAGCTGTGGTATGGAAGTTTGGTCTTCTCTTTGTATGCTTTAGGTGCCGTGTAGGCCGTAAACTGAGTCATCTAGGTCCCCTGAGCAAAAGCTCGTTTCCTTTCACTTTGGTGACCTAGTTGTTCTAATGCCTTGTATTGTGTTTGTACATGCTGTCTCTAATTTTGCTGCTTGATTTTTTCTTTTGTTTTTTTTTTCCCCCAAAATTTATGTGTATCGAGATATTGGCTCAGTCATAGTCCGGTTTGTGGGAGAAGCTTTACTTTATTCATAAGATAGGCTTAGACCCTCCTTGGGACTTGACTTACTTTTTCATCGAATACTTTATAGATTCGAAAGTATTTG

Coding sequence (CDS)

ATGGACGTCGATCCTCCTCTCTACGACCTCATCGCTATCAATGATGGTGATATTCAGAACATTGTTCTATCGTACCTTGTTCATAACTGTTATAAAGAAACTGCAGAGTCGTTCGCTAATTGTACTGGGCTTAAGCAGCACACGGATTATCTTGTTCACATGGAAAAAAGAAAAAGAATTTATGATTTTGCAGTAGAAGGGAATGCACTTAAAGCCATTGAGTTAACAGAAGAGTTAGCACAGGGTTTACTTGAGAATAATGAGGACCTGCATTTTGATCTTTTAAGCCTTCATTTTGTTGAACTTGTATGCTCTAGGAAATGCACAATGGCCCTGGAATTTGCTCAGGTCAAGCTTGCTCCTTTTGGGAAGTTGCATAAATATGTGGAAAAACTTGAAGATTTTATGGCCCTCCTTGCTTATGAAGAACCAGAGAAATCTCCAATGTTTCATCTTCTTAGCGTGGATTATCGGCAAAGAGTAGCAGAAAGTCTAAATCGAGCAATTCTTGCGCATGGAAATTTGCCGAGCTATACAGCAATGGAAAGGCTGATCAAGCAGGCGACTGTAGTTAGACACTCCTTAAGCCAAGAGCTAGGCACGGATGGGCTTCAATCATTTTCTTTGAGCGATTTTCTGAAGAGCTAA
Homology
[Close]
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match: GID8_CHICK (Glucose-induced degradation protein 8 homolog OS=Gallus gallus GN=GID8 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.0e-21
Identity = 62/187 (33.16%), Postives = 107/187 (57.22%), Query Frame = 1 

Query: 13  INDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNALKA 72
           I   D+  ++++YLV   +KE AE F   +G++   D L  +++R +I +  ++G   +A
Sbjct: 24  IQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVD-LETLDERIKIREMILKGQIQEA 83

Query: 73  IELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGK-LHKYVEK 132
           I L   L   LL+ N  L+F L   H +EL+  R+   ALEFAQ +LA  G+   + + +
Sbjct: 84  ISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTE 143

Query: 133 LEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQATVV 192
           +E  +ALLA++ PE+SP   LL++  RQ+V   +N+A+L + N  S   + +L+K     
Sbjct: 144 MERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENRESTPKLAKLLKLLLWA 203

Query: 193 RHSLSQE 199
           ++ L Q+
Sbjct: 204 QNELDQK 209

[Close]
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match: GID8_DANRE (Glucose-induced degradation protein 8 homolog OS=Danio rerio GN=gid8 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 62/189 (32.80%), Postives = 109/189 (57.67%), Query Frame = 1 

Query: 11  IAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNAL 70
           + I   D+  ++++YLV   +KE AE F   +G++ + D L  +++R +I +  ++G   
Sbjct: 22  VHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPNVD-LDSLDERIKIREMVLKGQIQ 81

Query: 71  KAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGK-LHKYV 130
           +AI L   L   LL+ N  L+F L   H +EL+  R+   ALEFAQ +LA  G+   + +
Sbjct: 82  EAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQLAEQGEESRECL 141

Query: 131 EKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQAT 190
            ++E  +ALLA++ PE+SP   LL++  RQ+V   +N+A+L + N  S   + +L+K   
Sbjct: 142 TEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENRESTPKLAKLLKLLL 201

Query: 191 VVRHSLSQE 199
             ++ L Q+
Sbjct: 202 WAQNELDQK 209

[Close]
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match: GID8_MOUSE (Glucose-induced degradation protein 8 homolog OS=Mus musculus GN=Gid8 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 61/187 (32.62%), Postives = 106/187 (56.68%), Query Frame = 1 

Query: 13  INDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNALKA 72
           +   D+  ++++YLV   +KE AE F   +G++   D L  +++R +I +  ++G   +A
Sbjct: 24  VQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVD-LETLDERIKIREMILKGQIQEA 83

Query: 73  IELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGK-LHKYVEK 132
           I L   L   LL+ N  L+F L   H +EL+  R+   ALEFAQ +LA  G+   + + +
Sbjct: 84  IALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTE 143

Query: 133 LEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQATVV 192
           +E  +ALLA++ PE+SP   LL +  RQ+V   +N+A+L + N  S   + +L+K     
Sbjct: 144 MERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYENRESTPKLAKLLKLLLWA 203

Query: 193 RHSLSQE 199
           ++ L Q+
Sbjct: 204 QNELDQK 209

[Close]
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match: GID8_BOVIN (Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20
Identity = 61/187 (32.62%), Postives = 106/187 (56.68%), Query Frame = 1 

Query: 13  INDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNALKA 72
           +   D+  ++++YLV   +KE AE F   +G++   D L  +++R +I +  ++G   +A
Sbjct: 24  VQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVD-LETLDERIKIREMILKGQIQEA 83

Query: 73  IELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGK-LHKYVEK 132
           I L   L   LL+ N  L+F L   H +EL+  R+   ALEFAQ +LA  G+   + + +
Sbjct: 84  IALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTE 143

Query: 133 LEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQATVV 192
           +E  +ALLA++ PE SP   LL++  RQ+V   +N+A+L + N  S   + +L+K     
Sbjct: 144 MERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYENRESTPKLAKLLKLLLWA 203

Query: 193 RHSLSQE 199
           ++ L Q+
Sbjct: 204 QNELDQK 209

[Close]
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match: GID8_HUMAN (Glucose-induced degradation protein 8 homolog OS=Homo sapiens GN=GID8 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 61/187 (32.62%), Postives = 105/187 (56.15%), Query Frame = 1 

Query: 13  INDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNALKA 72
           +   D+  ++++YLV   +KE AE F   +G++   D L  +++R +I +  ++G   +A
Sbjct: 24  VQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVD-LETLDERIKIREMILKGQIQEA 83

Query: 73  IELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGK-LHKYVEK 132
           I L   L   LL+ N  L+F L   H +EL+  R+   ALEFAQ +LA  G+   + + +
Sbjct: 84  IALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTE 143

Query: 133 LEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQATVV 192
           +E  +ALLA++ PE+SP   LL    RQ+V   +N+A+L + N  S   + +L+K     
Sbjct: 144 MERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENRESTPKLAKLLKLLLWA 203

Query: 193 RHSLSQE 199
           ++ L Q+
Sbjct: 204 QNELDQK 209

[Close]
BLAST of CmoCh09G001250 vs. TrEMBL
Match: A0A0A0LJ37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865360 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 9.0e-104
Identity = 196/215 (91.16%), Postives = 198/215 (92.09%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP  YD IA+NDGDIQNIVLSYLVHNCYKETAESF  CTGLK HTDYLV M KRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           YDFAVEGNALKAIELTEE+A GLLE  EDLHFDLLSLHFVELVCSRKCT ALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA
Sbjct: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLIKQ TVVR SLSQELG DG QSFSL DFLKS
Sbjct: 181 MERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of CmoCh09G001250 vs. TrEMBL
Match: A0A0B0MW62_GOSAR (Protein C20orf11 OS=Gossypium arboreum GN=F383_32567 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.2e-89
Identity = 168/215 (78.14%), Postives = 185/215 (86.05%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP LY+ IA+ND D+ NI++SYLVHNC+KET ESF  CTG+KQ +DYL  MEKRKRI
Sbjct: 1   MDVDPRLYEQIAVNDTDVHNIIMSYLVHNCFKETVESFIACTGMKQPSDYLEDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           Y FA+EGNALKAIELTE+LA  LLE N+DLHFDLLSLHFVELVCSRKCT ALEFAQ+KL 
Sbjct: 61  YQFALEGNALKAIELTEQLATNLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQMKLT 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KYVEKLEDFMALLAYEEPEKSPMFHLLS++YRQ VAESLNRAILAHGN P+YTA
Sbjct: 121 PFGKEQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAESLNRAILAHGNHPTYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+Q TVVR  L+QE   DG   FSL DFLKS
Sbjct: 181 MERLIQQTTVVRQCLNQEHAKDGPLPFSLKDFLKS 215

[Close]
BLAST of CmoCh09G001250 vs. TrEMBL
Match: A0A0D2MA51_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G126000 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-88
Identity = 167/215 (77.67%), Postives = 184/215 (85.58%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP LY+ IA+ND DI NI++SYLVHNC+KET ESF  CTG+KQ +DYL  MEKRKRI
Sbjct: 1   MDVDPRLYEQIAVNDNDIHNIIMSYLVHNCFKETVESFIACTGMKQPSDYLEDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           Y FA+EGNALKAIELTE+LA  LLE N+DLHFDLLSLHFVELVCSRKCT ALEFAQ+KL 
Sbjct: 61  YQFALEGNALKAIELTEQLATNLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQMKLT 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KYVEKLEDFMALLAYEEPEKSPMFHLLS++YRQ VAE LNRAILAHGN P+YTA
Sbjct: 121 PFGKEQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAEILNRAILAHGNHPTYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+Q TVVR  L+QE   DG   FSL DF+KS
Sbjct: 181 MERLIQQTTVVRQCLNQEHAKDGPPPFSLKDFIKS 215

[Close]
BLAST of CmoCh09G001250 vs. TrEMBL
Match: A0A0B2SNR1_GLYSO (UPF0559 protein OS=Glycine soja GN=glysoja_023110 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MD+DP  Y+ +A+ND DI NIVLSYL+HNCYKE+ ESF  CTG KQ TDYL  M+KRKRI
Sbjct: 1   MDLDPRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGAKQPTDYLEDMDKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           + FA+EGNALKAIELTE+LA+ +LENN+DL FDLLSLHFVELVCSRKCT ALEFAQ KL 
Sbjct: 61  FHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLG 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KY+EKLEDFMALLAY+EPEKSPMFHLLS++YRQ+VA+SLNRAILAH NLPSYTA
Sbjct: 121 PFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+QATVVR  LSQE G DG   FSL DFLKS
Sbjct: 181 MERLIQQATVVRQCLSQEAGKDG-PPFSLKDFLKS 214

[Close]
BLAST of CmoCh09G001250 vs. TrEMBL
Match: C6T9V4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G028200 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MD+DP  Y+ +A+ND DI NIVLSYL+HNCYKE+ ESF  CTG KQ TDYL  M+KRKRI
Sbjct: 1   MDLDPRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGAKQPTDYLEDMDKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           + FA+EGNALKAIELTE+LA+ +LENN+DL FDLLSLHFVELVCSRKCT ALEFAQ KL 
Sbjct: 61  FHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLG 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KY+EKLEDFMALLAY+EPEKSPMFHLLS++YRQ+VA+SLNRAILAH NLPSYTA
Sbjct: 121 PFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+QATVVR  LSQE G DG   FSL DFLKS
Sbjct: 181 MERLIQQATVVRQCLSQEAGKDG-PPFSLKDFLKS 214

[Close]
BLAST of CmoCh09G001250 vs. TAIR10
Match: AT1G06060.1 (AT1G06060.1 LisH and RanBPM domains containing protein)

HSP 1 Score: 255.8 bits (652), Expect = 2.4e-68
Identity = 129/212 (60.85%), Postives = 161/212 (75.94%), Query Frame = 1 

Query: 3   VDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYD 62
           +DP  ++   + D DI +IV+SYL+HNC+ ETA+S A+ TG+KQ      +ME+RK+I  
Sbjct: 1   MDPRQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIH 60

Query: 63  FAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPF 122
           F +E  ALKA ELTE+LAQ LLE N+DL FDLL LHFVEL+C+  CT AL+F + +LAPF
Sbjct: 61  FILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPF 120

Query: 123 GKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAME 182
           GK+ KYVEKLED MALLAYE+PEKSPMFHLLS +YRQ+VA++LNR IL H N PSYT ME
Sbjct: 121 GKVKKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYTPME 180

Query: 183 RLIKQATVVRHSLSQELGTDGLQSFSLSDFLK 215
           R+I+Q TVVR  L++E G D    FSL D LK
Sbjct: 181 RIIQQVTVVRQYLTEENGKDAFPPFSLKDSLK 212

[Close]
BLAST of CmoCh09G001250 vs. TAIR10
Match: AT1G61150.1 (AT1G61150.1 LisH and RanBPM domains containing protein)

HSP 1 Score: 84.7 bits (208), Expect = 7.4e-17
Identity = 56/189 (29.63%), Postives = 94/189 (49.74%), Query Frame = 1 

Query: 11  IAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNAL 70
           + +   D+  +V+++LV   Y E AE F   +G K   D L  +  R  +      GN  
Sbjct: 37  VKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQNGNVE 96

Query: 71  KAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGKLHK-YV 130
            AIE   +L   +L+ N +L F L     +EL+   K   ALEFAQ +LAP G+ ++ ++
Sbjct: 97  DAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFL 156

Query: 131 EKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQAT 190
           E+LE  +ALL +++    P+  LL + +R + A  +N AIL   +      +  L+K   
Sbjct: 157 EELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKMLI 216

Query: 191 VVRHSLSQE 199
             +  L ++
Sbjct: 217 WAQTQLDEK 224

[Close]
BLAST of CmoCh09G001250 vs. TAIR10
Match: AT1G35470.2 (AT1G35470.2 SPla/RYanodine receptor (SPRY) domain-containing protein)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-11
Identity = 56/206 (27.18%), Postives = 103/206 (50.00%), Query Frame = 1 

Query: 21  IVLSYLVHNCYKETAESFANCT------------GLKQHTDYLVHMEKRKRIYDFAVEGN 80
           +V +YL+H  Y+ET ++F   T                  D    +++RK +      G 
Sbjct: 251 LVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGE 310

Query: 81  ALKAIELTEELAQGLLENNEDLHFDLLSLH-FVELVCSRKCTMALEFAQVKLAPFGKLHK 140
              A+   ++L   ++++++ +   LL    F+ELV   K    + + +++LA F  L  
Sbjct: 311 IDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELVRVGKLEEGVNYGRLELAKFVGLTG 370

Query: 141 YVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHG----------NLPS 200
           + + +ED  ALLAYE+PE+S +++ L    R+ VA+++N AIL+            +L S
Sbjct: 371 FQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVADAVNAAILSTNPNKKDVQRSCHLQS 430

[Close]
BLAST of CmoCh09G001250 vs. TAIR10
Match: AT4G09300.1 (AT4G09300.1 LisH and RanBPM domains containing protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 47/183 (25.68%), Postives = 81/183 (44.26%), Query Frame = 1 

Query: 17  DIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRIYDFAVEGNALKAIELT 76
           D+  +V++ LV   Y+E AE F     +    + L  M +R  +       N   AIE  
Sbjct: 26  DMNRLVMNLLVAEGYREAAEKFKE-ESITMPEEDLASMNERLEVIKAIESRNLEDAIEKL 85

Query: 77  EELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLAPFGKLHKYVEK-LEDF 136
             L   +++ +  LH  +L    +EL+  +K   A+ FAQ KLAP  + ++ +++ LE  
Sbjct: 86  NALNPEIIKTSFHLHQQML----IELIREKKTEEAVAFAQEKLAPLAEENEALQRELEKT 145

Query: 137 MALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTAMERLIKQATVVRHSL 196
           + +L  E     P   L       R A  +N AI           +ERL+K+    ++ L
Sbjct: 146 VCILVTEGLPNCPSRELFHNSQWIRTASHVNEAIHTSQTGEKGPELERLLKELIWTQNQL 203

Query: 197 SQE 199
            ++
Sbjct: 206 DEK 203

[Close]
BLAST of CmoCh09G001250 vs. NCBI nr
Match: gi|659133029|ref|XP_008466517.1| (PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 3.1e-105
Identity = 198/215 (92.09%), Postives = 200/215 (93.02%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP  YD IA+NDGDIQNIVLSYLVHNCYKETAESF  CTGLKQHTDYLV M KRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKQHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           YDFAVEGNALKAIELTEE+A GLLE NEDLHFDLLSLHFVELVCSRKCT ALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA
Sbjct: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLIKQ TVVR SLSQELG DG QSFSL DFLKS
Sbjct: 181 MERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of CmoCh09G001250 vs. NCBI nr
Match: gi|449460223|ref|XP_004147845.1| (PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-103
Identity = 196/215 (91.16%), Postives = 198/215 (92.09%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP  YD IA+NDGDIQNIVLSYLVHNCYKETAESF  CTGLK HTDYLV M KRKRI
Sbjct: 1   MDVDPRHYDNIAVNDGDIQNIVLSYLVHNCYKETAESFTTCTGLKHHTDYLVDMAKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           YDFAVEGNALKAIELTEE+A GLLE  EDLHFDLLSLHFVELVCSRKCT ALEFAQVKLA
Sbjct: 61  YDFAVEGNALKAIELTEEVAPGLLEKIEDLHFDLLSLHFVELVCSRKCTEALEFAQVKLA 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA
Sbjct: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLIKQ TVVR SLSQELG DG QSFSL DFLKS
Sbjct: 181 MERLIKQVTVVRQSLSQELGKDGFQSFSLRDFLKS 215

[Close]
BLAST of CmoCh09G001250 vs. NCBI nr
Match: gi|728825558|gb|KHG06303.1| (Protein C20orf11 [Gossypium arboreum])

HSP 1 Score: 335.1 bits (858), Expect = 9.0e-89
Identity = 168/215 (78.14%), Postives = 185/215 (86.05%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP LY+ IA+ND D+ NI++SYLVHNC+KET ESF  CTG+KQ +DYL  MEKRKRI
Sbjct: 1   MDVDPRLYEQIAVNDTDVHNIIMSYLVHNCFKETVESFIACTGMKQPSDYLEDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           Y FA+EGNALKAIELTE+LA  LLE N+DLHFDLLSLHFVELVCSRKCT ALEFAQ+KL 
Sbjct: 61  YQFALEGNALKAIELTEQLATNLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQMKLT 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KYVEKLEDFMALLAYEEPEKSPMFHLLS++YRQ VAESLNRAILAHGN P+YTA
Sbjct: 121 PFGKEQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAESLNRAILAHGNHPTYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+Q TVVR  L+QE   DG   FSL DFLKS
Sbjct: 181 MERLIQQTTVVRQCLNQEHAKDGPLPFSLKDFLKS 215

[Close]
BLAST of CmoCh09G001250 vs. NCBI nr
Match: gi|823133247|ref|XP_012466255.1| (PREDICTED: glucose-induced degradation protein 8 homolog [Gossypium raimondii])

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-88
Identity = 167/215 (77.67%), Postives = 184/215 (85.58%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MDVDP LY+ IA+ND DI NI++SYLVHNC+KET ESF  CTG+KQ +DYL  MEKRKRI
Sbjct: 1   MDVDPRLYEQIAVNDNDIHNIIMSYLVHNCFKETVESFIACTGMKQPSDYLEDMEKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           Y FA+EGNALKAIELTE+LA  LLE N+DLHFDLLSLHFVELVCSRKCT ALEFAQ+KL 
Sbjct: 61  YQFALEGNALKAIELTEQLATNLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQMKLT 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KYVEKLEDFMALLAYEEPEKSPMFHLLS++YRQ VAE LNRAILAHGN P+YTA
Sbjct: 121 PFGKEQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAEILNRAILAHGNHPTYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+Q TVVR  L+QE   DG   FSL DF+KS
Sbjct: 181 MERLIQQTTVVRQCLNQEHAKDGPPPFSLKDFIKS 215

[Close]
BLAST of CmoCh09G001250 vs. NCBI nr
Match: gi|358248824|ref|NP_001239946.1| (uncharacterized protein LOC100801338 [Glycine max])

HSP 1 Score: 327.0 bits (837), Expect = 2.4e-86
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1 

Query: 1   MDVDPPLYDLIAINDGDIQNIVLSYLVHNCYKETAESFANCTGLKQHTDYLVHMEKRKRI 60
           MD+DP  Y+ +A+ND DI NIVLSYL+HNCYKE+ ESF  CTG KQ TDYL  M+KRKRI
Sbjct: 1   MDLDPRQYENLAVNDNDIHNIVLSYLIHNCYKESVESFIACTGAKQPTDYLEDMDKRKRI 60

Query: 61  YDFAVEGNALKAIELTEELAQGLLENNEDLHFDLLSLHFVELVCSRKCTMALEFAQVKLA 120
           + FA+EGNALKAIELTE+LA+ +LENN+DL FDLLSLHFVELVCSRKCT ALEFAQ KL 
Sbjct: 61  FHFALEGNALKAIELTEQLAKDILENNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLG 120

Query: 121 PFGKLHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHGNLPSYTA 180
           PFGK  KY+EKLEDFMALLAY+EPEKSPMFHLLS++YRQ+VA+SLNRAILAH NLPSYTA
Sbjct: 121 PFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPSYTA 180

Query: 181 MERLIKQATVVRHSLSQELGTDGLQSFSLSDFLKS 216
           MERLI+QATVVR  LSQE G DG   FSL DFLKS
Sbjct: 181 MERLIQQATVVRQCLSQEAGKDG-PPFSLKDFLKS 214

The following BLAST results are available for this feature:
BLAST of CmoCh09G001250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GID8_CHICK8.0e-2133.16Glucose-induced degradation protein 8 homolog OS=Gallus gallus GN=GID8 PE=2 SV=1[more]
GID8_DANRE1.0e-2032.80Glucose-induced degradation protein 8 homolog OS=Danio rerio GN=gid8 PE=2 SV=1[more]
GID8_MOUSE2.3e-2032.62Glucose-induced degradation protein 8 homolog OS=Mus musculus GN=Gid8 PE=1 SV=1[more]
GID8_BOVIN2.3e-2032.62Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8 PE=2 SV=1[more]
GID8_HUMAN3.0e-2032.62Glucose-induced degradation protein 8 homolog OS=Homo sapiens GN=GID8 PE=1 SV=1[more]
BLAST of CmoCh09G001250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ37_CUCSA9.0e-10491.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865360 PE=4 SV=1[more]
A0A0B0MW62_GOSAR6.2e-8978.14Protein C20orf11 OS=Gossypium arboreum GN=F383_32567 PE=4 SV=1[more]
A0A0D2MA51_GOSRA1.8e-8877.67Uncharacterized protein OS=Gossypium raimondii GN=B456_002G126000 PE=4 SV=1[more]
A0A0B2SNR1_GLYSO1.7e-8677.21UPF0559 protein OS=Glycine soja GN=glysoja_023110 PE=4 SV=1[more]
C6T9V4_SOYBN1.7e-8677.21Uncharacterized protein OS=Glycine max GN=GLYMA_04G028200 PE=2 SV=1[more]
BLAST of CmoCh09G001250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06060.12.4e-6860.85 LisH and RanBPM domains containing protein[more]
AT1G61150.17.4e-1729.63 LisH and RanBPM domains containing protein[more]
AT1G35470.28.0e-1127.18 SPla/RYanodine receptor (SPRY) domain-containing protein[more]
AT4G09300.11.1e-0725.68 LisH and RanBPM domains containing protein[more]
BLAST of CmoCh09G001250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133029|ref|XP_008466517.1|3.1e-10592.09PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis melo][more]
gi|449460223|ref|XP_004147845.1|1.3e-10391.16PREDICTED: glucose-induced degradation protein 8 homolog [Cucumis sativus][more]
gi|728825558|gb|KHG06303.1|9.0e-8978.14Protein C20orf11 [Gossypium arboreum][more]
gi|823133247|ref|XP_012466255.1|2.6e-8877.67PREDICTED: glucose-induced degradation protein 8 homolog [Gossypium raimondii][more]
gi|358248824|ref|NP_001239946.1|2.4e-8677.21uncharacterized protein LOC100801338 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH
IPR006595CTLH_C
IPR013144CRA_dom
IPR024964CTLH/CRA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G001250.1CmoCh09G001250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006594LIS1 homology motifPROFILEPS50896LISHcoord: 14..46
score: 8
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 53..110
score: 6.
IPR006595CTLH, C-terminal LisH motifPROFILEPS50897CTLHcoord: 53..110
score: 10
IPR013144CRA domainSMARTSM00757toby_final6coord: 106..201
score: 1.6
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 54..195
score: 1.2
NoneNo IPR availablePANTHERPTHR12864RAN BINDING PROTEIN 9-RELATEDcoord: 1..213
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh09G001250Cucsa.342730Cucumber (Gy14) v1cgycmoB0920
CmoCh09G001250CmaCh01G019370Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G001250Csa3G865360Cucumber (Chinese Long) v2cmocuB008
CmoCh09G001250MELO3C003787Melon (DHL92) v3.5.1cmomeB021
CmoCh09G001250CSPI03G43080Wild cucumber (PI 183967)cmocpiB008
CmoCh09G001250Cp4.1LG02g07690Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G001250MELO3C003787.2Melon (DHL92) v3.6.1cmomedB020
CmoCh09G001250CsaV3_3G045530Cucumber (Chinese Long) v3cmocucB0012
CmoCh09G001250Bhi09G001877Wax gourdcmowgoB0034
CmoCh09G001250CsGy3G040660Cucumber (Gy14) v2cgybcmoB260
CmoCh09G001250Carg08698Silver-seed gourdcarcmoB0144
CmoCh09G001250Carg17169Silver-seed gourdcarcmoB1261
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh09G001250CmoCh01G019990Cucurbita moschata (Rifu)cmocmoB017
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G001250Silver-seed gourdcarcmoB0255
CmoCh09G001250Silver-seed gourdcarcmoB0541
CmoCh09G001250Silver-seed gourdcarcmoB1307
CmoCh09G001250Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G001250Cucumber (Chinese Long) v3cmocucB0007
CmoCh09G001250Cucumber (Chinese Long) v3cmocucB0028
CmoCh09G001250Watermelon (97103) v2cmowmbB002
CmoCh09G001250Watermelon (97103) v2cmowmbB014
CmoCh09G001250Watermelon (97103) v2cmowmbB023
CmoCh09G001250Wax gourdcmowgoB0011
CmoCh09G001250Wax gourdcmowgoB0016
CmoCh09G001250Wax gourdcmowgoB0024
CmoCh09G001250Cucurbita moschata (Rifu)cmocmoB033
CmoCh09G001250Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G001250Cucurbita moschata (Rifu)cmocmoB027
CmoCh09G001250Cucurbita moschata (Rifu)cmocmoB035
CmoCh09G001250Cucumber (Gy14) v1cgycmoB0640
CmoCh09G001250Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G001250Cucurbita maxima (Rimu)cmacmoB165
CmoCh09G001250Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G001250Wild cucumber (PI 183967)cmocpiB002
CmoCh09G001250Wild cucumber (PI 183967)cmocpiB026
CmoCh09G001250Cucumber (Chinese Long) v2cmocuB002
CmoCh09G001250Melon (DHL92) v3.5.1cmomeB012
CmoCh09G001250Watermelon (Charleston Gray)cmowcgB015
CmoCh09G001250Watermelon (Charleston Gray)cmowcgB023
CmoCh09G001250Watermelon (97103) v1cmowmB018
CmoCh09G001250Watermelon (97103) v1cmowmB007
CmoCh09G001250Watermelon (97103) v1cmowmB027
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB003
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB011
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB018
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G001250Cucurbita pepo (Zucchini)cmocpeB037
CmoCh09G001250Bottle gourd (USVL1VR-Ls)cmolsiB001
CmoCh09G001250Bottle gourd (USVL1VR-Ls)cmolsiB012
CmoCh09G001250Bottle gourd (USVL1VR-Ls)cmolsiB020
CmoCh09G001250Cucumber (Gy14) v2cgybcmoB138
CmoCh09G001250Melon (DHL92) v3.6.1cmomedB012
CmoCh09G001250Melon (DHL92) v3.6.1cmomedB039