CmoCh06G008440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G008440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptidyl-prolyl cis-trans isomerase-like 3
Location	Cmo_Chr06 : 4697035 .. 4699467 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCAACGACGTCGTTTTCATCTCCGTACTGCAATTCAGCTCGGCTTCATCGTAATCGTTGACTAGGATCTCGTCCATTTTGCTCTTTTGCCAATGCTCCGGCCTTCATTTCAATGTCGTAATTCATCTATAACACAGAAATTTCGAAATTCGGAAATTCTATGTTCGAAATCCGAGCAAAAGCCTCATAAATTTCCAGTCAACGCTCGTCTCGCCAGCCCTTGTTCTTGAATTCGTTCCTCCGATCTCAGTTACCTGTATTAGCATCTGGGTTCGGCAATTCTTTGCCATTTCTCAGATGGGTCGTAAGCAAATCGACCAAGAAGCCTCTCGTTTAACCCTACCGATCCTAATTTTGGTTAGTTTCATCTCCTGCGCCGCCGTGTACACGTTTCTCCCTTTTTTGTTCAGACTCAACGGCGGCGATCCTTCCAAACTTGAATCGTTCGCAGTGATTAGAGATGGTGATGCCGGAAATTTGGAAGGTGGAGCCGAGGAATGTTGCCGGGGAATCGAGAATTTGGAGTATTGGGGTCCGGCTGTGAAGTGGGGTTCTGAATTTAAGTTCAATTCCTCTGAGCTGTGTTGTAAGGCTTGTAAAGCTATGTGCAACGGCAATGATGGGCCTTGCTTGTGTGATACTTGGGTTTATTGTGGAAATCGAAAGGAATGTGGTTCAAAATTTGGTGAAGTATGTTGAAATCTTGTCTAGTTTTTCACTTTTTCTTCCTAATCATTACCTTAATCATGTGTATTTGGTTTGATTAGATCCTTTATTTTAGAGTTCTGTTCTTCAAATTCTGTGGTTTCAATGAGAGATATTAAGCTCTGTTGAATTCATGTATGATTTTATGTTTATGTCAATAGTGTTGGCTGAAGAAACAGAAGGATACATTGGCCCCTGATCGGCAGGAAGGAGGGACAACAAGTATTTGGACATCTGGGCTTATCTTTGGAAGAGGAGAGGTTTTGAATCTCTCAAACATAAAGTTTATGATTGTTTTAACAATTGTTTGTATTGTTTTCAATGTTCTATCCCAAATTTTGTAGGCTTTTCCAGAAGGAAATGGCCATTTGTTTGATCATTAACCCATTATATATGTATCTATGGTTATGATATCTTCAGCTTCTTGTCTATTGATGAGTCTTCAATGGTTTGTTTCCTAGGGAATCGTTGCGTTGGAGACCGACCATGGCACGCTTCATATCAAGGTAACCGTCCTTGCTTGTATGTGCTCTTAGTTACCTTCCTAACTCGTGTTCTTAGGGGTGAGGAGACTCGTGTTCGTTATTTGTTTTAATGCTTCGTATTCTGAGGAAACTTTCGTCTGTTCGTATTCGTCGATTGCATGATTGAATTGTTGAATATCAGAATGTTCTTGACAATAGAAACTTCAAGATCTTACCCATATAACTGTTACATTTTTGTGCATTCTGAGATAGTGTTTTTGGTTATACCCTGTTTATGGACTCTGATAGCATTTAGAACGCTTCCCCCTGTCGTTTTCACGTGTCGTTATAATGCGAAAATTTGCCTCGTTCACTTGTGCAGCATCTATTCATAGCGTTTGTGACATATTTCTTAACTTATGCAGCTCTTCCCTGACTGTGCTCCCCATTCTGTTGCCTACATTCTTGAGTTGTTGGAATTACGACATTGCGCTGGTTGCCACTTCTACCGTGCCGAGGGTCGAGGCCAATCTTGGGACTCGAAAGGAAACCCCATAGAAAACGTAAGGATGTCTTTCGTGTAGCTCCTTTTGCACACATTACACTTTTAAAAAGATAACTTAAGAGGATGAACTAGATATCCATATGAGGTGCAACAACCATGTTCTTATTCAAATTTCTTTGAACCACTAGGCTCCTTTAGGTCCTCCGTTTGCACTTATTCAAGGAACACTGGAAACCCAAGGGGAACCATTTAAGAAGATTTCCCCTGAAGTTTGCCCATACATAAAGCGCGGTTCGGTAGCGTGGGTTGGTTCGGGACCGGAATTCTTCATTAGTCTTGCAAACCACCAAGAATGGAATAAAGTGTACACGGTGTTCGGTTCGGTTCTCCCAGAAGACATGGAAGTTGCAGAGAAAATTGCTGGACTTCCTACCAAGCCCGATGTTTGGAACAATGTCAACGTTTCGGTGTTGCAAGAACACGTTCCGTTGCGGTTGAAACGAATGAAGAAGAGTCATGGAGATCTGAACATGAAATCAGATTGATATTTTGGTTATACCACTTCTTTTTCACATAATGTTCTTGAGTTTCTTTAAGTTCACTTATTTTTCTTTTAGCTGTTTCACTCTTATATTCCATTTTGGACAGTTTTTATTATGCCTCATAAAGCTATCATAGTTTCTTACTCATAAGAAAAAGAAAACAAAATCATTTCTCTTTCGAAGTGTTTAGTACCACATTTAACGGTTTAAGAAGCA

mRNA sequence

CCGCAACGACGTCGTTTTCATCTCCGTACTGCAATTCAGCTCGGCTTCATCGTAATCGTTGACTAGGATCTCGTCCATTTTGCTCTTTTGCCAATGCTCCGGCCTTCATTTCAATGTCGTAATTCATCTATAACACAGAAATTTCGAAATTCGGAAATTCTATGTTCGAAATCCGAGCAAAAGCCTCATAAATTTCCAGTCAACGCTCGTCTCGCCAGCCCTTGTTCTTGAATTCGTTCCTCCGATCTCAGTTACCTGTATTAGCATCTGGGTTCGGCAATTCTTTGCCATTTCTCAGATGGGTCGTAAGCAAATCGACCAAGAAGCCTCTCGTTTAACCCTACCGATCCTAATTTTGGTTAGTTTCATCTCCTGCGCCGCCGTGTACACGTTTCTCCCTTTTTTGTTCAGACTCAACGGCGGCGATCCTTCCAAACTTGAATCGTTCGCAGTGATTAGAGATGGTGATGCCGGAAATTTGGAAGGTGGAGCCGAGGAATGTTGCCGGGGAATCGAGAATTTGGAGTATTGGGGTCCGGCTGTGAAGTGGGGTTCTGAATTTAAGTTCAATTCCTCTGAGCTGTGTTGTAAGGCTTGTAAAGCTATGTGCAACGGCAATGATGGGCCTTGCTTGTGTGATACTTGGGTTTATTGTGGAAATCGAAAGGAATGTGGTTCAAAATTTGGTGAATGTTGGCTGAAGAAACAGAAGGATACATTGGCCCCTGATCGGCAGGAAGGAGGGACAACAAGGAATCGTTGCGTTGGAGACCGACCATGGCACGCTTCATATCAAGGTAACCGTCCTTGCTTGTATGTGCTCTTAGTTACCTTCCTAACTCGTGTTCTTAGGGGTGAGGAGACTCGTGTTCGAAACTTTCGTCTGTTCGTATTCGTCGATTGCATGATTGAATTGTTGAATATCAGAATGTTCTTGACAATAGAAACTTCAAGATCTTACCCATATAACTGTTACATTTTTGTGCATTCTGAGATAGTGTTTTTGGTTATACCCTGTTTATGGACTCTGATAGCATTTAGAACGCTTCCCCCTGTCGTTTTCACGTGTCGTTATAATGCGAAAATTTGCCTCCTCTTCCCTGACTGTGCTCCCCATTCTGTTGCCTACATTCTTGAGTTGTTGGAATTACGACATTGCGCTGGTTGCCACTTCTACCGTGCCGAGGGTCGAGGCCAATCTTGGGACTCGAAAGGAAACCCCATAGAAAACGCTCCTTTAGGTCCTCCGTTTGCACTTATTCAAGGAACACTGGAAACCCAAGGGGAACCATTTAAGAAGATTTCCCCTGAAGTTTGCCCATACATAAAGCGCGGTTCGGTAGCGTGGGTTGGTTCGGGACCGGAATTCTTCATTAGTCTTGCAAACCACCAAGAATGGAATAAAGTGTACACGGTGTTCGGTTCGGTTCTCCCAGAAGACATGGAAGTTGCAGAGAAAATTGCTGGACTTCCTACCAAGCCCGATGTTTGGAACAATGTCAACGTTTCGGTGTTGCAAGAACACGTTCCGTTGCGGTTGAAACGAATGAAGAAGAGTCATGGAGATCTGAACATGAAATCAGATTGATATTTTGGTTATACCACTTCTTTTTCACATAATGTTCTTGAGTTTCTTTAAGTTCACTTATTTTTCTTTTAGCTGTTTCACTCTTATATTCCATTTTGGACAGTTTTTATTATGCCTCATAAAGCTATCATAGTTTCTTACTCATAAGAAAAAGAAAACAAAATCATTTCTCTTTCGAAGTGTTTAGTACCACATTTAACGGTTTAAGAAGCA

Coding sequence (CDS)

ATGGGTCGTAAGCAAATCGACCAAGAAGCCTCTCGTTTAACCCTACCGATCCTAATTTTGGTTAGTTTCATCTCCTGCGCCGCCGTGTACACGTTTCTCCCTTTTTTGTTCAGACTCAACGGCGGCGATCCTTCCAAACTTGAATCGTTCGCAGTGATTAGAGATGGTGATGCCGGAAATTTGGAAGGTGGAGCCGAGGAATGTTGCCGGGGAATCGAGAATTTGGAGTATTGGGGTCCGGCTGTGAAGTGGGGTTCTGAATTTAAGTTCAATTCCTCTGAGCTGTGTTGTAAGGCTTGTAAAGCTATGTGCAACGGCAATGATGGGCCTTGCTTGTGTGATACTTGGGTTTATTGTGGAAATCGAAAGGAATGTGGTTCAAAATTTGGTGAATGTTGGCTGAAGAAACAGAAGGATACATTGGCCCCTGATCGGCAGGAAGGAGGGACAACAAGGAATCGTTGCGTTGGAGACCGACCATGGCACGCTTCATATCAAGGTAACCGTCCTTGCTTGTATGTGCTCTTAGTTACCTTCCTAACTCGTGTTCTTAGGGGTGAGGAGACTCGTGTTCGAAACTTTCGTCTGTTCGTATTCGTCGATTGCATGATTGAATTGTTGAATATCAGAATGTTCTTGACAATAGAAACTTCAAGATCTTACCCATATAACTGTTACATTTTTGTGCATTCTGAGATAGTGTTTTTGGTTATACCCTGTTTATGGACTCTGATAGCATTTAGAACGCTTCCCCCTGTCGTTTTCACGTGTCGTTATAATGCGAAAATTTGCCTCCTCTTCCCTGACTGTGCTCCCCATTCTGTTGCCTACATTCTTGAGTTGTTGGAATTACGACATTGCGCTGGTTGCCACTTCTACCGTGCCGAGGGTCGAGGCCAATCTTGGGACTCGAAAGGAAACCCCATAGAAAACGCTCCTTTAGGTCCTCCGTTTGCACTTATTCAAGGAACACTGGAAACCCAAGGGGAACCATTTAAGAAGATTTCCCCTGAAGTTTGCCCATACATAAAGCGCGGTTCGGTAGCGTGGGTTGGTTCGGGACCGGAATTCTTCATTAGTCTTGCAAACCACCAAGAATGGAATAAAGTGTACACGGTGTTCGGTTCGGTTCTCCCAGAAGACATGGAAGTTGCAGAGAAAATTGCTGGACTTCCTACCAAGCCCGATGTTTGGAACAATGTCAACGTTTCGGTGTTGCAAGAACACGTTCCGTTGCGGTTGAAACGAATGAAGAAGAGTCATGGAGATCTGAACATGAAATCAGATTGA

Homology

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BLAST of CmoCh06G008440 vs. TrEMBL
Match: A0A0A0L227_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017120 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 6.6e-82
Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL LRHCAGCHFYRAEGRG+SWDSKGN IENAPLGPPFAL+QGTL
Sbjct: 180 LFPDCAPHSVAYILELLGLRHCAGCHFYRAEGRGESWDSKGNHIENAPLGPPFALVQGTL 239

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E+QG  FKKI  EVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGS+LPEDME+A
Sbjct: 240 ESQGIQFKKIPVEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSILPEDMEIA 299

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNMKSD 430
           EKIA LPTKPDVWNN+NVS+LQ+ V LR+ RMKKSHG+LN+KSD
Sbjct: 300 EKIARLPTKPDVWNNINVSLLQKPVSLRITRMKKSHGELNVKSD 343

[Close]

BLAST of CmoCh06G008440 vs. TrEMBL
Match: F6H7Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0236g00040 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71
Identity = 129/164 (78.66%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           L PDCAPHSVAYILELL LRHCAGC FYRAE RG  WDS+GN I++APLGPPFALIQGTL
Sbjct: 178 LLPDCAPHSVAYILELLALRHCAGCQFYRAESRGMYWDSQGNHIKDAPLGPPFALIQGTL 237

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E  G  FKKI  E CP I+RGSVAWVGSGPEFFISLANHQEW KVYTVFGSVLPEDME+A
Sbjct: 238 EALGTTFKKIPTEDCPTIRRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDMEIA 297

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNMKSD 430
           EKIA LPTK DVWN +NVSVL+  +PLRL+RMKKS GDLN+ ++
Sbjct: 298 EKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNVATN 341

[Close]

BLAST of CmoCh06G008440 vs. TrEMBL
Match: F6HD70_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0591g00010 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 128/161 (79.50%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           L PDCAPHSVAYILELL LRHCAGC FYRAE RG  WDS+GN I++APLGPPFALIQGTL
Sbjct: 178 LLPDCAPHSVAYILELLALRHCAGCQFYRAESRGMYWDSQGNHIKDAPLGPPFALIQGTL 237

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E  G  FKKI  E CP + RGSVAWVGSGPEFFISLANHQEW KVYTVFGSVLPEDME+A
Sbjct: 238 EALGTTFKKIPTEDCPTLGRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDMEIA 297

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNM 427
           EKIA LPTK DVWN +NVSVL+  +PLRL+RMKKS GDLN+
Sbjct: 298 EKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNV 338

[Close]

BLAST of CmoCh06G008440 vs. TrEMBL
Match: B9N2V4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s08220g PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70
Identity = 124/160 (77.50%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL LRHCAGC F+RAEGRGQ WD++GN I+ AP GPPFA+IQGTL
Sbjct: 174 LFPDCAPHSVAYILELLTLRHCAGCQFHRAEGRGQLWDAEGNHIKKAPFGPPFAMIQGTL 233

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E QG  FKKI  E CPYI+RGSVAWVGSGPEFFISLANHQEW K YTVFGSVLPEDME+A
Sbjct: 234 EAQGTSFKKIPTEECPYIRRGSVAWVGSGPEFFISLANHQEWKKAYTVFGSVLPEDMEIA 293

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLN 426
           EKIA LPTK DVWNN+NVSVL++ +PL ++R+K   G+LN
Sbjct: 294 EKIAQLPTKSDVWNNINVSVLEKPLPLLVRRLKARQGNLN 333

[Close]

BLAST of CmoCh06G008440 vs. TrEMBL
Match: B9MUW2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s03180g PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 9.9e-70
Identity = 127/165 (76.97%), Postives = 141/165 (85.45%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL LRHCAGC FYRAEGRGQ WDS+GN I+ AP GPPFA+IQGTL
Sbjct: 174 LFPDCAPHSVAYILELLTLRHCAGCQFYRAEGRGQLWDSEGNHIKKAPFGPPFAIIQGTL 233

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E QG  FKKI  E CPYI+RGSVAWVGSGPEFFISLA+HQEW K YTVFGSVLPEDME+A
Sbjct: 234 EAQGTTFKKIPTEECPYIRRGSVAWVGSGPEFFISLADHQEWKKAYTVFGSVLPEDMEIA 293

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKK-SHGDLNMKSD 430
           EKIA LPTK DVWNN+NVSVL++ VPL ++R+    + D N+KSD
Sbjct: 294 EKIAQLPTKSDVWNNINVSVLEKPVPLLVRRLDGWGNLDTNVKSD 338

[Close]

BLAST of CmoCh06G008440 vs. TAIR10
Match: AT4G17070.1 (AT4G17070.1 peptidyl-prolyl cis-trans isomerases)

HSP 1 Score: 232.6 bits (592), Expect = 4.4e-61
Identity = 105/153 (68.63%), Postives = 122/153 (79.74%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           L P+CAPHSV YIL LL LRHCAGC F+RAE RG  WDS+GN ++NAP GPP+A+IQG L
Sbjct: 181 LHPECAPHSVYYILSLLTLRHCAGCQFHRAENRGSYWDSEGNHVKNAPFGPPYAMIQGIL 240

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           + +G  F  I  E CP I RGSVAWVGSGPEFFISLANH EW + YTVFG VLPEDM+V 
Sbjct: 241 QAEGNIFTPIPTEHCPTISRGSVAWVGSGPEFFISLANHHEWKQSYTVFGLVLPEDMDVV 300

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMK 419
           E IAGLPT+ DVWN+VNVSVL++ V L ++RMK
Sbjct: 301 ETIAGLPTRADVWNSVNVSVLEKPVSLTVRRMK 333

[Close]

BLAST of CmoCh06G008440 vs. NCBI nr
Match: gi|449459010|ref|XP_004147239.1| (PREDICTED: uncharacterized protein LOC101206948 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 9.5e-82
Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL LRHCAGCHFYRAEGRG+SWDSKGN IENAPLGPPFAL+QGTL
Sbjct: 180 LFPDCAPHSVAYILELLGLRHCAGCHFYRAEGRGESWDSKGNHIENAPLGPPFALVQGTL 239

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E+QG  FKKI  EVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGS+LPEDME+A
Sbjct: 240 ESQGIQFKKIPVEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSILPEDMEIA 299

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNMKSD 430
           EKIA LPTKPDVWNN+NVS+LQ+ V LR+ RMKKSHG+LN+KSD
Sbjct: 300 EKIARLPTKPDVWNNINVSLLQKPVSLRITRMKKSHGELNVKSD 343

[Close]

BLAST of CmoCh06G008440 vs. NCBI nr
Match: gi|659095795|ref|XP_008448772.1| (PREDICTED: uncharacterized protein LOC103490837 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 142/164 (86.59%), Postives = 153/164 (93.29%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL LRHCAGCHFYRAEG+G+SWDSKGN IENAPLGPPFAL+QGTL
Sbjct: 180 LFPDCAPHSVAYILELLGLRHCAGCHFYRAEGKGESWDSKGNHIENAPLGPPFALVQGTL 239

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E+QG  FKKI  EVCPYIKRGSVAWVGSGPEFFISLANH+EWNKVYTVFGSVLPEDME+A
Sbjct: 240 ESQGIQFKKIPTEVCPYIKRGSVAWVGSGPEFFISLANHREWNKVYTVFGSVLPEDMEIA 299

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNMKSD 430
           EKIA LPTKPDVWNN+NVSVLQ+ V LR+ RMKKS G+LN+KSD
Sbjct: 300 EKIARLPTKPDVWNNINVSVLQKPVSLRITRMKKSRGELNVKSD 343

[Close]

BLAST of CmoCh06G008440 vs. NCBI nr
Match: gi|720059229|ref|XP_010274510.1| (PREDICTED: uncharacterized protein LOC104609823 [Nelumbo nucifera])

HSP 1 Score: 283.5 bits (724), Expect = 6.2e-73
Identity = 128/164 (78.05%), Postives = 140/164 (85.37%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAY LELL L HCAGC FYRAEGRG SWDSKGN I NAP GPPFALIQGTL
Sbjct: 185 LFPDCAPHSVAYTLELLGLHHCAGCQFYRAEGRGSSWDSKGNNINNAPFGPPFALIQGTL 244

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E QG  FKKI  E CP I+RGSVAWVGSGPEFFISLANH EW K YTVFGSVLPEDME+A
Sbjct: 245 EAQGTTFKKIPTEACPPIRRGSVAWVGSGPEFFISLANHNEWRKSYTVFGSVLPEDMEIA 304

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLNMKSD 430
           EKIA LPTKPDVWNN+NVSVL++ +P R +R++ SHGDLN+ ++
Sbjct: 305 EKIAELPTKPDVWNNINVSVLEKPIPFRFRRIRTSHGDLNLNTN 348

[Close]

BLAST of CmoCh06G008440 vs. NCBI nr
Match: gi|720044253|ref|XP_010269830.1| (PREDICTED: uncharacterized protein LOC104606378 [Nelumbo nucifera])

HSP 1 Score: 278.5 bits (711), Expect = 2.0e-71
Identity = 132/190 (69.47%), Postives = 147/190 (77.37%), Query Frame = 1


Query: 239 PCLWT--LIAFRTLPPVVFTCRYNAKICLLFPDCAPHSVAYILELLELRHCAGCHFYRAE 298
           P +WT  LI  +    +     Y      LFPDCAPHSVAYILELL L HCAGC  YRAE
Sbjct: 156 PQIWTSGLIFGKGEGIIGLETEYGVLHIKLFPDCAPHSVAYILELLGLHHCAGCQLYRAE 215

Query: 299 GRGQSWDSKGNPIENAPLGPPFALIQGTLETQGEPFKKISPEVCPYIKRGSVAWVGSGPE 358
           GRG SWDS+GN I NAPLGPPFAL+QGTLE QG  FKKI  E CP I+RGSVAWVGSGPE
Sbjct: 216 GRGSSWDSEGNHISNAPLGPPFALLQGTLEAQGTTFKKIPTEACPAIRRGSVAWVGSGPE 275

Query: 359 FFISLANHQEWNKVYTVFGSVLPEDMEVAEKIAGLPTKPDVWNNVNVSVLQEHVPLRLKR 418
           FFISLANH EW K YTVFGSVLPEDME+AEKIA LPTKPD+WNN+ VSVL++ +PL  +R
Sbjct: 276 FFISLANHDEWKKAYTVFGSVLPEDMEIAEKIAQLPTKPDLWNNIEVSVLEKPIPLSFRR 335

Query: 419 MKKSHGDLNM 427
           +K SHGDLN+
Sbjct: 336 IKMSHGDLNL 345

[Close]

BLAST of CmoCh06G008440 vs. NCBI nr
Match: gi|743944292|ref|XP_011016665.1| (PREDICTED: uncharacterized protein LOC105120171 isoform X2 [Populus euphratica])

HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71
Identity = 126/160 (78.75%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 266 LFPDCAPHSVAYILELLELRHCAGCHFYRAEGRGQSWDSKGNPIENAPLGPPFALIQGTL 325
           LFPDCAPHSVAYILELL L HCAGC FYRAEGRGQ WD++GN I+ AP GPPFA+IQGTL
Sbjct: 71  LFPDCAPHSVAYILELLTLHHCAGCQFYRAEGRGQLWDAEGNHIKKAPFGPPFAMIQGTL 130

Query: 326 ETQGEPFKKISPEVCPYIKRGSVAWVGSGPEFFISLANHQEWNKVYTVFGSVLPEDMEVA 385
           E QG  FKKI  E CPYI+RGSVAWVGSGPEFFISLANHQEW K YTVFGSVLPEDME+A
Sbjct: 131 EAQGTSFKKIPTEECPYIRRGSVAWVGSGPEFFISLANHQEWKKAYTVFGSVLPEDMEIA 190

Query: 386 EKIAGLPTKPDVWNNVNVSVLQEHVPLRLKRMKKSHGDLN 426
           EKIA LPTK DVWNN+NVSVL++ VPL ++R+KK  G+LN
Sbjct: 191 EKIAQLPTKSDVWNNINVSVLEKPVPLLVRRLKKRQGNLN 230

The following BLAST results are available for this feature:

BLAST of CmoCh06G008440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G008440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L227_CUCSA	6.6e-82	87.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017120 PE=4 SV=1	[more]
F6H7Y0_VITVI	2.4e-71	78.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0236g00040 PE=4 SV=...	[more]
F6HD70_VITVI	1.2e-70	79.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0591g00010 PE=4 SV=...	[more]
B9N2V4_POPTR	2.0e-70	77.50	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s08220g PE=4 SV=1	[more]
B9MUW2_POPTR	9.9e-70	76.97	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s03180g PE=4 SV=1	[more]

BLAST of CmoCh06G008440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17070.1	4.4e-61	68.63	peptidyl-prolyl cis-trans isomerases	[more]

BLAST of CmoCh06G008440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459010\|ref\|XP_004147239.1\|	9.5e-82	87.20	PREDICTED: uncharacterized protein LOC101206948 [Cucumis sativus]	[more]
gi\|659095795\|ref\|XP_008448772.1\|	1.4e-80	86.59	PREDICTED: uncharacterized protein LOC103490837 [Cucumis melo]	[more]
gi\|720059229\|ref\|XP_010274510.1\|	6.2e-73	78.05	PREDICTED: uncharacterized protein LOC104609823 [Nelumbo nucifera]	[more]
gi\|720044253\|ref\|XP_010269830.1\|	2.0e-71	69.47	PREDICTED: uncharacterized protein LOC104606378 [Nelumbo nucifera]	[more]
gi\|743944292\|ref\|XP_011016665.1\|	2.6e-71	78.75	PREDICTED: uncharacterized protein LOC105120171 isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0000413	protein peptidyl-prolyl isomerization
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008440.1	CmoCh06G008440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 264..397 score: 3.
None	No IPR available	PANTHER	PTHR33344	FAMILY NOT NAMED	coord: 201..377 score: 1.4E-90coord: 2..135 score: 1.4
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G008440	Cucsa.321370	Cucumber (Gy14) v1	cgycmoB0893
CmoCh06G008440	Cla008757	Watermelon (97103) v1	cmowmB777
CmoCh06G008440	Csa3G017120	Cucumber (Chinese Long) v2	cmocuB815
CmoCh06G008440	MELO3C013896	Melon (DHL92) v3.5.1	cmomeB756
CmoCh06G008440	ClCG10G002160	Watermelon (Charleston Gray)	cmowcgB730
CmoCh06G008440	CSPI03G02220	Wild cucumber (PI 183967)	cmocpiB823
CmoCh06G008440	Lsi07G012500	Bottle gourd (USVL1VR-Ls)	cmolsiB766
CmoCh06G008440	Cp4.1LG08g06930	Cucurbita pepo (Zucchini)	cmocpeB795
CmoCh06G008440	MELO3C013896.2	Melon (DHL92) v3.6.1	cmomedB861
CmoCh06G008440	CsaV3_3G002250	Cucumber (Chinese Long) v3	cmocucB0961
CmoCh06G008440	Cla97C10G186800	Watermelon (97103) v2	cmowmbB819
CmoCh06G008440	Bhi11G000073	Wax gourd	cmowgoB0973
CmoCh06G008440	CsGy3G002120	Cucumber (Gy14) v2	cgybcmoB409
CmoCh06G008440	Carg12054	Silver-seed gourd	carcmoB0770

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G008440	Wild cucumber (PI 183967)	cmocpiB828
CmoCh06G008440	Cucumber (Chinese Long) v2	cmocuB820
CmoCh06G008440	Melon (DHL92) v3.5.1	cmomeB746
CmoCh06G008440	Watermelon (Charleston Gray)	cmowcgB722
CmoCh06G008440	Watermelon (97103) v1	cmowmB773
CmoCh06G008440	Cucurbita pepo (Zucchini)	cmocpeB770
CmoCh06G008440	Cucurbita pepo (Zucchini)	cmocpeB792
CmoCh06G008440	Bottle gourd (USVL1VR-Ls)	cmolsiB755
CmoCh06G008440	Cucumber (Gy14) v2	cgybcmoB414
CmoCh06G008440	Melon (DHL92) v3.6.1	cmomedB848
CmoCh06G008440	Silver-seed gourd	carcmoB0963
CmoCh06G008440	Silver-seed gourd	carcmoB1059
CmoCh06G008440	Cucumber (Chinese Long) v3	cmocucB0966
CmoCh06G008440	Watermelon (97103) v2	cmowmbB848
CmoCh06G008440	Cucurbita moschata (Rifu)	cmocmoB294
CmoCh06G008440	Cucurbita moschata (Rifu)	cmocmoB438
CmoCh06G008440	Cucumber (Gy14) v1	cgycmoB0875
CmoCh06G008440	Cucurbita maxima (Rimu)	cmacmoB343
CmoCh06G008440	Cucurbita maxima (Rimu)	cmacmoB533
CmoCh06G008440	Cucurbita maxima (Rimu)	cmacmoB623
CmoCh06G008440	Cucurbita maxima (Rimu)	cmacmoB829