CmoCh05G007860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G007860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Beta-hexosaminidase (3.2.1.52)
Location	Cmo_Chr05 : 4526629 .. 4528439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAAGTTGTTGTCTGGAAACAATCCGTATCCTCCCAAATGCAGTATTGAGATAAACATGTTCGACCTTTTTACTGAACAGGTTAAGAAAACAGGGTATGAAAGAATCTGATGCTTACAAGTACTTTGTCCTGCAAGCACAAAAAATAGCTTTGTCACATGGATATGAACTTGTAAATTGGTATGTGCTTCTGCTTTAGTTTAACCATCAAAGGCAACTTTCTGATCTTATCAGACAATGGATAAATTTCAGGGAAGAGACTTTTAATGATTTTGGCAGCGAATTGAGTCGAAAGACTGTTGTGCATAACTGGTATGTCATACGTACTCCCAGCTATAAATTTCCACATAGTGAACTCTAGTTTTTTCGCACTTACGTAGATGTTTATATATATATATATATATATATATAGTAATTATGTAGATTGTTCAGGATTCATTACTAGAAGAATTTTTTTTTTTTTTCATTTGCAAATGAAGACTACAGATTCAATTTTAGCTATTTATATATTAAATGCCATGTCATGTAACTGAGTAAATGTCTTCAATTATTTTAAGCTTCTCCACGTGCCATGTAATTGAGTAAATGTCTTCAATGGAGCCCCATCTTGTGGCCTGATTTTTCATCAATAAATAAATAAGCTTCTCAATGCATGAAAACAAAAATTTTATCTGGTTCTGCTTAGATCTCAATCTAAATATCTGAATATAAAATCAGTTCTTCTAAATTGAAAATTGTAATCGAATGTGAAACAAATCTGGTTTACCCGTAATATAAGGGATGGAAAGATTTACACCGAAATTATAGGATAGTGTTGCCAAAAACCATAGTGATTTTCTACTTTTCCCTCTCAAAATTCTTTCCCCATAAACCAAGCCGAGTTGGATTCTTCTCAATACATACAATACAAATTAAGCTATATGAATAAATAAGTTAGAAAAGTAGAATTTTAAAAGAAGGTTACTAGTTTGAACTCGAAATAAGGCATCCCATATTCATACCTTTCCTGATTGCTATTCATTTTTAGGCTAGGAACTGGTGTAGCCCCCGAGGTTGTTGCAGCTGGGTTAAGATGCATTGTTAGCAACCAAGATAGTTGGTACTTGGACCACATAGACACAAGTTGGGAGCAGTTCTATACAAATGAGCCGCTTAAAAATATCACAGATCCTCAGCATCAAAAACTAGTCATTGGTGGGGAGGTATGCATGTGGGGTGAAAATATCGATGGGTCAAATATTGAGCAAACTATTTGGCCTCGTGCTGCAGCCGCTGCAGGTACGTCACTGTTCTTTTGTTAATATTTTTCCATTATGAAATCAATTTTTTAAAATCTACATTATCCAATTTAGAAAAGCTAATAATGGCTTATGATAGTTCCCATTTCCCAGACCCCATACAAAACTATTATTATGGTGCAAATTCATACGATCTATAGAGGCTCAGGCAATGCAATATTTTTCTAATTTATATAAAAAAGATGAAGTTTCACATTCCCACATTCCCAAATGCCAAATTAAATAGCTGAAGAAAATCACCTACTAGCTCTGCTCTGTTGCTCCCTCTTCTCTGATTTAGCTCATTATTTGCTCTACTTTAATTAACTGGTATCAACTTCCTTTGGTGATCATGTACTGAAAGAGCGCCTTTGGACACCATATGACAATCTGGCTAAAGACCCCAATCAAGTTTTTGCAAGGTTGACACATTTCAGGTGTTTGCTGAATCAAAGAGGGATTAATGCCGCTCCTGTATCAGGACTCGGCAGATCTGCTCCTTGGGGTCCAGGTTCTTGTTATGTGCAATGA

mRNA sequence

ATGCCTAAGTTGTTGTCTGGAAACAATCCGTATCCTCCCAAATGCAGTATTGAGATAAACATGTTCGACCTTTTTACTGAACAGGTTAAGAAAACAGGGGAAGAGACTTTTAATGATTTTGGCAGCGAATTGAGTCGAAAGACTGTTGTGCATAACTGGCTAGGAACTGGTGTAGCCCCCGAGGTTGTTGCAGCTGGGTTAAGATGCATTGTTAGCAACCAAGATAGTTGGTACTTGGACCACATAGACACAAGTTGGGAGCAGTTCTATACAAATGAGCCGCTTAAAAATATCACAGATCCTCAGCATCAAAAACTAGTCATTGGTGGGGAGGTATGCATGTGGGGTGAAAATATCGATGGGTCAAATATTGAGCAAACTATTTGGCCTCGTGCTGCAGCCGCTGCAGACCCCAATCAAGTTTTTGCAAGGTTGACACATTTCAGGTGTTTGCTGAATCAAAGAGGGATTAATGCCGCTCCTGTATCAGGACTCGGCAGATCTGCTCCTTGGGGTCCAGGTTCTTGTTATGTGCAATGA

Coding sequence (CDS)

ATGCCTAAGTTGTTGTCTGGAAACAATCCGTATCCTCCCAAATGCAGTATTGAGATAAACATGTTCGACCTTTTTACTGAACAGGTTAAGAAAACAGGGGAAGAGACTTTTAATGATTTTGGCAGCGAATTGAGTCGAAAGACTGTTGTGCATAACTGGCTAGGAACTGGTGTAGCCCCCGAGGTTGTTGCAGCTGGGTTAAGATGCATTGTTAGCAACCAAGATAGTTGGTACTTGGACCACATAGACACAAGTTGGGAGCAGTTCTATACAAATGAGCCGCTTAAAAATATCACAGATCCTCAGCATCAAAAACTAGTCATTGGTGGGGAGGTATGCATGTGGGGTGAAAATATCGATGGGTCAAATATTGAGCAAACTATTTGGCCTCGTGCTGCAGCCGCTGCAGACCCCAATCAAGTTTTTGCAAGGTTGACACATTTCAGGTGTTTGCTGAATCAAAGAGGGATTAATGCCGCTCCTGTATCAGGACTCGGCAGATCTGCTCCTTGGGGTCCAGGTTCTTGTTATGTGCAATGA

Homology

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BLAST of CmoCh05G007860 vs. Swiss-Prot
Match: HEXO3_ARATH (Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-56
Identity = 102/158 (64.56%), Postives = 118/158 (74.68%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETF +FGS+L+RKTVVHNWL TG+   V A+GLRCIVSNQ+ WYLDHID  W+ FY NE
Sbjct: 378 EETFINFGSKLNRKTVVHNWLNTGLVENVTASGLRCIVSNQEFWYLDHIDAPWQGFYANE 437

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           P +NITD + Q LV+GGEVCMWGE+ID S+IEQTIWPRAAAAA+            PN V
Sbjct: 438 PFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAAERLWTPYAKLAKNPNNV 497

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAP+ G GR  P+ PGSC  Q
Sbjct: 498 TTRLAHFRCLLNQRGVAAAPLVGGGRVVPFEPGSCLAQ 535

[Close]

BLAST of CmoCh05G007860 vs. Swiss-Prot
Match: HEXO1_ARATH (Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 86/161 (53.42%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETF+ FG +L  +TV+ NWL + +  + VA G RCI SNQ  WYLDH+D  WE+ Y  E
Sbjct: 381 EETFSSFGKDLDPRTVIQNWLVSDICQKAVAKGFRCIFSNQGYWYLDHLDVPWEEVYNTE 440

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD--------------PN 153
           PL  I DP  QKLVIGGEVCMWGE  D S + QTIWPRAAAAA+                
Sbjct: 441 PLNGIEDPSLQKLVIGGEVCMWGETADTSVVLQTIWPRAAAAAERMWSTREAVSKGNITL 500

Query: 154 QVFARLTHFRCLLNQRGINAAPVSGL-GRSAPWGPGSCYVQ 180
               RL +FRCLLN RG+ AAPV     R  P GPGSCY Q
Sbjct: 501 TALPRLHYFRCLLNNRGVPAAPVDNFYARRPPLGPGSCYAQ 541

[Close]

BLAST of CmoCh05G007860 vs. Swiss-Prot
Match: HEXA_BOVIN (Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.1e-19
Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 1


Query: 62  VVAAGLRCIVSNQDSWYLDHID--TSWEQFYTNEPLKNITDPQHQKLVIGGEVCMWGENI 121
           V  AG R ++S    WYL+HI     W++ Y  EPL     P+ + LVIGGE CMWGE +
Sbjct: 407 VTRAGFRALLSAP--WYLNHITYGPDWKEIYLVEPLAFEGSPEQKALVIGGEACMWGEYV 466

Query: 122 DGSNIEQTIWPRAAAAADP----------NQVFARLTHFRCLLNQRGINAAPVS 164
           D +N+   +WPRA A A+           +  F RL HFRC L +RG+ A P+S
Sbjct: 467 DSTNLVPRLWPRAGAVAERLWSNKMVSNLDFAFKRLAHFRCELLRRGVQAQPLS 518

[Close]

BLAST of CmoCh05G007860 vs. Swiss-Prot
Match: HEXA_PONAB (Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-18
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1


Query: 62  VVAAGLRCIVSNQDSWYLDHID--TSWEQFYTNEPLKNITDPQHQKLVIGGEVCMWGENI 121
           V  AG R ++S    WYL+ I     W+ FY  EPL     P+ + LVIGGE CMWGE +
Sbjct: 407 VTKAGFRALLSAP--WYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYV 466

Query: 122 DGSNIEQTIWPRAAAAA----------DPNQVFARLTHFRCLLNQRGINAAPVS 164
           D +N+   +WPRA A A          D    + RL+HFRC L +RG+ A P++
Sbjct: 467 DNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQPLN 518

[Close]

BLAST of CmoCh05G007860 vs. Swiss-Prot
Match: HEXA_MOUSE (Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-18
Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 1


Query: 61  EVVAAGLRCIVSNQDSWYLDHID--TSWEQFYTNEPLKNITDPQHQKLVIGGEVCMWGEN 120
           ++  AG R ++S    WYL+ +     W+  Y  EPL     P+ + LVIGGE CMWGE 
Sbjct: 405 DITRAGFRALLSAP--WYLNRVKYGPDWKDMYKVEPLAFHGTPEQKALVIGGEACMWGEY 464

Query: 121 IDGSNIEQTIWPRAAAAADP----------NQVFARLTHFRCLLNQRGINAAPVS 164
           +D +N+   +WPRA A A+           +  F RL+HFRC L +RGI A P+S
Sbjct: 465 VDSTNLVPRLWPRAGAVAERLWSSNLTTNIDFAFKRLSHFRCELVRRGIQAQPIS 517

[Close]

BLAST of CmoCh05G007860 vs. TrEMBL
Match: A0A0A0LKG3_CUCSA (Beta-hexosaminidase OS=Cucumis sativus GN=Csa_2G073000 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.3e-71
Identity = 129/158 (81.65%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFGSELSRKTVVHNWLGTGVA +VVAAGLRCIVSNQDSWYLDHIDTSWE+FY NE
Sbjct: 382 EETFNDFGSELSRKTVVHNWLGTGVAQKVVAAGLRCIVSNQDSWYLDHIDTSWEKFYANE 441

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAA------------DPNQV 153
           PL+NI +P+ QKLVIGGEVCMWGE +D SNIEQTIWPRAAAAA            DP QV
Sbjct: 442 PLQNIKNPRQQKLVIGGEVCMWGEVVDASNIEQTIWPRAAAAAERLWTQYDNLAKDPRQV 501

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
           FARL HFRCLLNQRGI+AAPVSGLGRS PWGPGSC+VQ
Sbjct: 502 FARLAHFRCLLNQRGIDAAPVSGLGRSDPWGPGSCFVQ 539

[Close]

BLAST of CmoCh05G007860 vs. TrEMBL
Match: A0A0D2QCK4_GOSRA (Beta-hexosaminidase OS=Gossypium raimondii GN=B456_002G136400 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-62
Identity = 114/158 (72.15%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFG++LSRKTVVHNWLG GVA  VVA+GLRCIVSNQD WYLDH+DT W++FY NE
Sbjct: 378 EETFNDFGNKLSRKTVVHNWLGGGVAQRVVASGLRCIVSNQDKWYLDHLDTPWQEFYANE 437

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           PL NIT+ + QKLVIGGEVCMWGE +DGS+IEQTIWPRAAAAA+            P  V
Sbjct: 438 PLTNITNLKQQKLVIGGEVCMWGETVDGSDIEQTIWPRAAAAAERLWTPFDKLAKNPRDV 497

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAPV+GLGR+AP GPGSCY Q
Sbjct: 498 TGRLAHFRCLLNQRGVAAAPVAGLGRAAPEGPGSCYRQ 535

[Close]

BLAST of CmoCh05G007860 vs. TrEMBL
Match: A0A0D2R5J6_GOSRA (Beta-hexosaminidase OS=Gossypium raimondii GN=B456_002G136400 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-62
Identity = 114/158 (72.15%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFG++LSRKTVVHNWLG GVA  VVA+GLRCIVSNQD WYLDH+DT W++FY NE
Sbjct: 367 EETFNDFGNKLSRKTVVHNWLGGGVAQRVVASGLRCIVSNQDKWYLDHLDTPWQEFYANE 426

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           PL NIT+ + QKLVIGGEVCMWGE +DGS+IEQTIWPRAAAAA+            P  V
Sbjct: 427 PLTNITNLKQQKLVIGGEVCMWGETVDGSDIEQTIWPRAAAAAERLWTPFDKLAKNPRDV 486

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAPV+GLGR+AP GPGSCY Q
Sbjct: 487 TGRLAHFRCLLNQRGVAAAPVAGLGRAAPEGPGSCYRQ 524

[Close]

BLAST of CmoCh05G007860 vs. TrEMBL
Match: F6GYZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0340g00040 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-61
Identity = 115/158 (72.78%), Postives = 126/158 (79.75%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFGS+LSRKTVVHNWLG GVA +VVAAGLRCIVSNQD WYLDH+D  WE FY NE
Sbjct: 54  EETFNDFGSKLSRKTVVHNWLGGGVAEKVVAAGLRCIVSNQDKWYLDHLDAPWEGFYMNE 113

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAA------------DPNQV 153
           PL NIT+ Q QKL++GGEVCMWGE+ID S+IEQTIWPRAAAAA            DP+QV
Sbjct: 114 PLTNITNHQQQKLILGGEVCMWGEHIDASDIEQTIWPRAAAAAERLWSAYDNLAKDPSQV 173

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
           F RL HFRCLLNQRG+ AAP+ G GR AP  PGSCY Q
Sbjct: 174 FGRLAHFRCLLNQRGVAAAPLVGPGRVAPEEPGSCYKQ 211

[Close]

BLAST of CmoCh05G007860 vs. TrEMBL
Match: B9RM00_RICCO (Beta-hexosaminidase OS=Ricinus communis GN=RCOM_1076600 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.0e-60
Identity = 111/158 (70.25%), Postives = 127/158 (80.38%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFN FG++LSRKTVVHNWLG GVA +VVA+GLRCIVSNQD WYLDH+DT+W++FY NE
Sbjct: 370 EETFNSFGNKLSRKTVVHNWLGGGVAQQVVASGLRCIVSNQDQWYLDHLDTTWQEFYMNE 429

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           PL NIT+ + QKLVIGGEVCMWGE +D SNIEQTIWPRAAAAA+            P +V
Sbjct: 430 PLTNITNIEQQKLVIGGEVCMWGETVDASNIEQTIWPRAAAAAERLWTSYDKLAKNPREV 489

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAPV+G GR AP  PGSCY+Q
Sbjct: 490 TGRLAHFRCLLNQRGVAAAPVAGPGRGAPLEPGSCYLQ 527

[Close]

BLAST of CmoCh05G007860 vs. TAIR10
Match: AT1G65590.1 (AT1G65590.1 beta-hexosaminidase 3)

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-57
Identity = 102/158 (64.56%), Postives = 118/158 (74.68%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETF +FGS+L+RKTVVHNWL TG+   V A+GLRCIVSNQ+ WYLDHID  W+ FY NE
Sbjct: 378 EETFINFGSKLNRKTVVHNWLNTGLVENVTASGLRCIVSNQEFWYLDHIDAPWQGFYANE 437

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           P +NITD + Q LV+GGEVCMWGE+ID S+IEQTIWPRAAAAA+            PN V
Sbjct: 438 PFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAAERLWTPYAKLAKNPNNV 497

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAP+ G GR  P+ PGSC  Q
Sbjct: 498 TTRLAHFRCLLNQRGVAAAPLVGGGRVVPFEPGSCLAQ 535

[Close]

BLAST of CmoCh05G007860 vs. TAIR10
Match: AT3G55260.1 (AT3G55260.1 beta-hexosaminidase 1)

HSP 1 Score: 177.6 bits (449), Expect = 7.0e-45
Identity = 86/161 (53.42%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETF+ FG +L  +TV+ NWL + +  + VA G RCI SNQ  WYLDH+D  WE+ Y  E
Sbjct: 381 EETFSSFGKDLDPRTVIQNWLVSDICQKAVAKGFRCIFSNQGYWYLDHLDVPWEEVYNTE 440

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD--------------PN 153
           PL  I DP  QKLVIGGEVCMWGE  D S + QTIWPRAAAAA+                
Sbjct: 441 PLNGIEDPSLQKLVIGGEVCMWGETADTSVVLQTIWPRAAAAAERMWSTREAVSKGNITL 500

Query: 154 QVFARLTHFRCLLNQRGINAAPVSGL-GRSAPWGPGSCYVQ 180
               RL +FRCLLN RG+ AAPV     R  P GPGSCY Q
Sbjct: 501 TALPRLHYFRCLLNNRGVPAAPVDNFYARRPPLGPGSCYAQ 541

[Close]

BLAST of CmoCh05G007860 vs. TAIR10
Match: AT1G05590.1 (AT1G05590.1 beta-hexosaminidase 2)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 46/171 (26.90%), Postives = 72/171 (42.11%), Query Frame = 1


Query: 48  TVVHNWL-GTGVAPEVVAAGLRCIVSNQDSWYLD--HID--------------------- 107
           T++  W  G      +VAAG R IVS+ + +YLD  H                       
Sbjct: 405 TILQTWNNGPENTKRIVAAGYRVIVSSSEFYYLDCGHGGFLGNDSIYDQKESGGGSWCAP 464

Query: 108 -TSWEQFYTNEPLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAADP---- 167
             +W+  Y  +    + + + +KLV+GGEV +W E  D + ++  +WPRA+A A+     
Sbjct: 465 FKTWQSIYNYDIADGLLNEEERKLVLGGEVALWSEQADSTVLDSRLWPRASALAESLWSG 524

Query: 168 ----------NQVFARLTHFRCLLNQRGINAAPVSGLGRSAPW---GPGSC 177
                      +   RL  +R  + +RGI A P+  L     W    PG C
Sbjct: 525 NRDERGVKRCGEAVDRLNLWRYRMVKRGIGAEPIQPL-----WCLKNPGMC 570

[Close]

BLAST of CmoCh05G007860 vs. NCBI nr
Match: gi|659082570|ref|XP_008441912.1| (PREDICTED: beta-hexosaminidase 3 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.4e-73
Identity = 133/158 (84.18%), Postives = 140/158 (88.61%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFGSELSRKTVVHNWLGTGVA +VVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE
Sbjct: 382 EETFNDFGSELSRKTVVHNWLGTGVAQKVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 441

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAA------------DPNQV 153
           PL+NI DP+ QKLVIGGEVCMWGE +D SNIEQTIWPRAAAAA            DP+QV
Sbjct: 442 PLQNIKDPRQQKLVIGGEVCMWGEVVDASNIEQTIWPRAAAAAERLWTPYDNLAKDPSQV 501

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
           FARL HFRCLLNQRGI+AAPVSGLGRSAPWGPGSC+VQ
Sbjct: 502 FARLAHFRCLLNQRGIDAAPVSGLGRSAPWGPGSCFVQ 539

[Close]

BLAST of CmoCh05G007860 vs. NCBI nr
Match: gi|449470265|ref|XP_004152838.1| (PREDICTED: beta-hexosaminidase 3 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-70
Identity = 129/158 (81.65%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFGSELSRKTVVHNWLGTGVA +VVAAGLRCIVSNQDSWYLDHIDTSWE+FY NE
Sbjct: 382 EETFNDFGSELSRKTVVHNWLGTGVAQKVVAAGLRCIVSNQDSWYLDHIDTSWEKFYANE 441

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAA------------DPNQV 153
           PL+NI +P+ QKLVIGGEVCMWGE +D SNIEQTIWPRAAAAA            DP QV
Sbjct: 442 PLQNIKNPRQQKLVIGGEVCMWGEVVDASNIEQTIWPRAAAAAERLWTQYDNLAKDPRQV 501

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
           FARL HFRCLLNQRGI+AAPVSGLGRS PWGPGSC+VQ
Sbjct: 502 FARLAHFRCLLNQRGIDAAPVSGLGRSDPWGPGSCFVQ 539

[Close]

BLAST of CmoCh05G007860 vs. NCBI nr
Match: gi|823133606|ref|XP_012466642.1| (PREDICTED: beta-hexosaminidase 3 [Gossypium raimondii])

HSP 1 Score: 245.7 bits (626), Expect = 6.0e-62
Identity = 114/158 (72.15%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFG++LSRKTVVHNWLG GVA  VVA+GLRCIVSNQD WYLDH+DT W++FY NE
Sbjct: 367 EETFNDFGNKLSRKTVVHNWLGGGVAQRVVASGLRCIVSNQDKWYLDHLDTPWQEFYANE 426

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           PL NIT+ + QKLVIGGEVCMWGE +DGS+IEQTIWPRAAAAA+            P  V
Sbjct: 427 PLTNITNLKQQKLVIGGEVCMWGETVDGSDIEQTIWPRAAAAAERLWTPFDKLAKNPRDV 486

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAPV+GLGR+AP GPGSCY Q
Sbjct: 487 TGRLAHFRCLLNQRGVAAAPVAGLGRAAPEGPGSCYRQ 524

[Close]

BLAST of CmoCh05G007860 vs. NCBI nr
Match: gi|763747222|gb|KJB14661.1| (hypothetical protein B456_002G136400 [Gossypium raimondii])

HSP 1 Score: 245.7 bits (626), Expect = 6.0e-62
Identity = 114/158 (72.15%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFG++LSRKTVVHNWLG GVA  VVA+GLRCIVSNQD WYLDH+DT W++FY NE
Sbjct: 378 EETFNDFGNKLSRKTVVHNWLGGGVAQRVVASGLRCIVSNQDKWYLDHLDTPWQEFYANE 437

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAAD------------PNQV 153
           PL NIT+ + QKLVIGGEVCMWGE +DGS+IEQTIWPRAAAAA+            P  V
Sbjct: 438 PLTNITNLKQQKLVIGGEVCMWGETVDGSDIEQTIWPRAAAAAERLWTPFDKLAKNPRDV 497

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
             RL HFRCLLNQRG+ AAPV+GLGR+AP GPGSCY Q
Sbjct: 498 TGRLAHFRCLLNQRGVAAAPVAGLGRAAPEGPGSCYRQ 535

[Close]

BLAST of CmoCh05G007860 vs. NCBI nr
Match: gi|296080956|emb|CBI18622.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-61
Identity = 115/158 (72.78%), Postives = 126/158 (79.75%), Query Frame = 1


Query: 34  EETFNDFGSELSRKTVVHNWLGTGVAPEVVAAGLRCIVSNQDSWYLDHIDTSWEQFYTNE 93
           EETFNDFGS+LSRKTVVHNWLG GVA +VVAAGLRCIVSNQD WYLDH+D  WE FY NE
Sbjct: 68  EETFNDFGSKLSRKTVVHNWLGGGVAEKVVAAGLRCIVSNQDKWYLDHLDAPWEGFYMNE 127

Query: 94  PLKNITDPQHQKLVIGGEVCMWGENIDGSNIEQTIWPRAAAAA------------DPNQV 153
           PL NIT+ Q QKL++GGEVCMWGE+ID S+IEQTIWPRAAAAA            DP+QV
Sbjct: 128 PLTNITNHQQQKLILGGEVCMWGEHIDASDIEQTIWPRAAAAAERLWSAYDNLAKDPSQV 187

Query: 154 FARLTHFRCLLNQRGINAAPVSGLGRSAPWGPGSCYVQ 180
           F RL HFRCLLNQRG+ AAP+ G GR AP  PGSCY Q
Sbjct: 188 FGRLAHFRCLLNQRGVAAAPLVGPGRVAPEEPGSCYKQ 225

The following BLAST results are available for this feature:

BLAST of CmoCh05G007860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HEXO3_ARATH	2.2e-56	64.56	Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1	[more]
HEXO1_ARATH	1.2e-43	53.42	Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1	[more]
HEXA_BOVIN	8.1e-19	42.11	Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1	[more]
HEXA_PONAB	4.0e-18	41.23	Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1	[more]
HEXA_MOUSE	5.3e-18	40.00	Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2	[more]

BLAST of CmoCh05G007860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKG3_CUCSA	8.3e-71	81.65	Beta-hexosaminidase OS=Cucumis sativus GN=Csa_2G073000 PE=3 SV=1	[more]
A0A0D2QCK4_GOSRA	4.2e-62	72.15	Beta-hexosaminidase OS=Gossypium raimondii GN=B456_002G136400 PE=3 SV=1	[more]
A0A0D2R5J6_GOSRA	4.2e-62	72.15	Beta-hexosaminidase OS=Gossypium raimondii GN=B456_002G136400 PE=3 SV=1	[more]
F6GYZ3_VITVI	2.7e-61	72.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0340g00040 PE=4 SV=...	[more]
B9RM00_RICCO	1.0e-60	70.25	Beta-hexosaminidase OS=Ricinus communis GN=RCOM_1076600 PE=3 SV=1	[more]

BLAST of CmoCh05G007860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65590.1	1.2e-57	64.56	beta-hexosaminidase 3	[more]
AT3G55260.1	7.0e-45	53.42	beta-hexosaminidase 1	[more]
AT1G05590.1	2.3e-11	26.90	beta-hexosaminidase 2	[more]

BLAST of CmoCh05G007860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082570\|ref\|XP_008441912.1\|	4.4e-73	84.18	PREDICTED: beta-hexosaminidase 3 [Cucumis melo]	[more]
gi\|449470265\|ref\|XP_004152838.1\|	1.2e-70	81.65	PREDICTED: beta-hexosaminidase 3 [Cucumis sativus]	[more]
gi\|823133606\|ref\|XP_012466642.1\|	6.0e-62	72.15	PREDICTED: beta-hexosaminidase 3 [Gossypium raimondii]	[more]
gi\|763747222\|gb\|KJB14661.1\|	6.0e-62	72.15	hypothetical protein B456_002G136400 [Gossypium raimondii]	[more]
gi\|296080956\|emb\|CBI18622.3\|	3.9e-61	72.78	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013781	Glycoside hydrolase, catalytic domain
IPR015883	Glyco_hydro_20_cat
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006040	amino sugar metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0001575	globoside metabolic process
biological_process	GO:0006027	glycosaminoglycan catabolic process
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004563	beta-N-acetylhexosaminidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G007860.1	CmoCh05G007860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013781	Glycoside hydrolase, catalytic domain	GENE3D	G3DSA:3.20.20.80		coord: 34..162 score: 1.1
IPR015883	Glycoside hydrolase family 20, catalytic domain	PFAM	PF00728	Glyco_hydro_20	coord: 43..136 score: 4.8
IPR017853	Glycoside hydrolase superfamily	unknown	SSF51445	(Trans)glycosidases	coord: 35..162 score: 1.14
None	No IPR available	PANTHER	PTHR22600	BETA-HEXOSAMINIDASE	coord: 34..179 score: 1.2
None	No IPR available	PANTHER	PTHR22600:SF18	SUBFAMILY NOT NAMED	coord: 34..179 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G007860	Cucsa.178740	Cucumber (Gy14) v1	cgycmoB0510
CmoCh05G007860	CmaCh12G009420	Cucurbita maxima (Rimu)	cmacmoB191
CmoCh05G007860	CmaCh05G007460	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G007860	Cla005752	Watermelon (97103) v1	cmowmB764
CmoCh05G007860	Csa2G073000	Cucumber (Chinese Long) v2	cmocuB779
CmoCh05G007860	MELO3C008768	Melon (DHL92) v3.5.1	cmomeB725
CmoCh05G007860	ClCG11G011060	Watermelon (Charleston Gray)	cmowcgB696
CmoCh05G007860	CSPI02G06980	Wild cucumber (PI 183967)	cmocpiB784
CmoCh05G007860	Lsi11G008440	Bottle gourd (USVL1VR-Ls)	cmolsiB703
CmoCh05G007860	Cp4.1LG11g06530	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G007860	Cp4.1LG07g07830	Cucurbita pepo (Zucchini)	cmocpeB743
CmoCh05G007860	MELO3C008768.2	Melon (DHL92) v3.6.1	cmomedB822
CmoCh05G007860	CsaV3_2G009420	Cucumber (Chinese Long) v3	cmocucB0920
CmoCh05G007860	Cla97C11G217190	Watermelon (97103) v2	cmowmbB784
CmoCh05G007860	Bhi06G001005	Wax gourd	cmowgoB0933
CmoCh05G007860	CsGy2G007200	Cucumber (Gy14) v2	cgybcmoB240
CmoCh05G007860	Carg19830	Silver-seed gourd	carcmoB0232
CmoCh05G007860	Carg22663	Silver-seed gourd	carcmoB0009

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G007860	CmoCh12G009440	Cucurbita moschata (Rifu)	cmocmoB149

The following block(s) are covering this gene:

None