CmoCh05G004830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G004830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	D-aminoacyl-tRNA deacylase-like protein
Location	Cmo_Chr05 : 2267496 .. 2269539 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACTGGACCCATCGCAGCGGTCTTGAGTGCCAAAGCGAATGCGAACCGTCGGAAACGCACCTGCAGAAGAATCTCAAGAATCTATTGGCTGAGGCGCCCTAGACATTCGATTCAACAACCATCTCGCTCTGTTAAACCCTCAATTCACAGAAAGAGCAACAAAGAGGCAACCATGGCGACGTTAGTGGCGGCAACGATAGTTTCGATCAATCCTGCAAACGAGCTCCTCGCTTGCCCGGATGGCGCCCCGGTCCTTCTCTCCAGGTCCTCTAATCTCCTGCACCGATTTCCAATTTTAAGTGTTTCTGTTTCTCCCTTCGATTAATCGGATTTTTCTGTTGATTTGGAAATGAAAAGCTTCGCTAATCGAGAGGTGAGGCTGCTGCAACACGGTAGGAGCATTGTAGTTGAGGACGACCTAGATATTCGTTGGGAGGAGCTTGCTGGCGTGGTCGTGGACGAGGTCATTTTCTTCAGCCGGCATACTGCCGTTTCGAATCGTCCTGCCCTCACTGTTCATCGGATTGGTACGATTCCAGTGTTTCTTTACTCAGTTTCTTTAATCAATATAGAAGATATAAGATACGTTGTTCTTTTGGACTTCGAGGTTTTCATGCCCTAAATGTTTCATTCCCCTCTCCAACCATTGAGGTGTTACAAATGGTATCAGACTCCGACATTAGGCGATGTGTCAGGAGGTTGAGCTTCGAAGGGGTGGACACGAGGTGGTGTCCAAACAAAGACATTAGGTCTCGAAGGGAGTGGATTAGGGGGATCCCACATCGATTGGAGAAGGGAACGAGTGTCATCGAGGATGCTGGCCCCCAAAGGGGTGGATTGTGGGACCCCACATCGACTGTGGAGGTGAACGAAACATTATTTACAAGGGTGTGGAAACCTCTCCCTAACACACTGGGCCTGAAGGAGTAGATTAGGGATCCCACATTGATTGGAGAAGGGAACGAATGCTATCGAGGACGATGATCCTGAAGGGGGTGGATTGTGATCTCTTCTATGAGATCCCACCTCGGTTGAAGAGGGAAACGATGTATTAGGATGTAGAACCCTCTCCCTAGCAGGCGCGTTTTTAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCTCAAAGAGGACAATATCTACTAGTGGTGGGCTTAAACCGTTACATTTCCAACTTTTATTTAAATTTATAATCGCTCTATCTGCTTGATAACATGTCACCGAAGCTAGCTCGGTCTCTTTGTATCATCATTTTATCACTCATTTGTTGGTATGCATTATTCAAAATAATTTCTAAGCCTACCCATGAAAAAGATGTCTATGTAATCACCGCTAGCAGATATTGTTCTCTTTGTGCTTTTCCTTCTGAGCCTCCCTTTAAGTTTTAAAACACGAAATTTCTACACTCTTGTAATGAATGCTTTATGATGAATTAAGTTACTAACTACATAACTTGATATGTTTTTAAGCGTTAACAACTTCTTAATTTCGATGCCTTCATAATTTTCCCTCCCTCGATGATATGTTTTGCATCGTTCTACCATTTGCTCAGCAATATTATCTTCTTGTCGAACGTTTCTATGTTATATAATTTGATACTGTGATCGTGATTCAGGGAACAGAATAAGAACAATAAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCAGTAAGTATTGGTCGGTCTGGCTGTTCTTCCCGTTGATGTGATCATTTCTTTAAAAGGCTATTTTTAACTCTATACTTCTAAGTCTAGCTCTATTTTAGTGTTTATACTTTCAATATATCTTTAAAAAATAGTTTTTTTTTTAGCAAATTGAATTAGGATCGATAATCATTTAATTTTTGAAAAATAATCTTATAAATATTGTTTCTATCTATGAGTCTTTATCACGAGTTTTTGCCGCTTTGAAATATTTTCAAAATAGGTAGGTCTGTCTTTCTCGAGATCCCTTGAGTTGAAAGACATGAGACATACATAAAAAATATGAACCAGGCTCTCGAAAGCTCATGTCTCGTAG

mRNA sequence

GTAACTGGACCCATCGCAGCGGTCTTGAGTGCCAAAGCGAATGCGAACCGTCGGAAACGCACCTGCAGAAGAATCTCAAGAATCTATTGGCTGAGGCGCCCTAGACATTCGATTCAACAACCATCTCGCTCTGTTAAACCCTCAATTCACAGAAAGAGCAACAAAGAGGCAACCATGGCGACGTTAGTGGCGGCAACGATAGTTTCGATCAATCCTGCAAACGAGCTCCTCGCTTGCCCGGATGGCGCCCCGGTCCTTCTCTCCAGCTTCGCTAATCGAGAGGTGAGGCTGCTGCAACACGGTAGGAGCATTGTAGTTGAGGACGACCTAGATATTCGTTGGGAGGAGCTTGCTGGCGTGGTCGTGGACGAGGTCATTTTCTTCAGCCGGCATACTGCCGTTTCGAATCGTCCTGCCCTCACTGTTCATCGGATTGGTACGATTCCAGTGGAACAGAATAAGAACAATAAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCAGCTCTCGAAAGCTCATGTCTCGTAG

Coding sequence (CDS)

GTAACTGGACCCATCGCAGCGGTCTTGAGTGCCAAAGCGAATGCGAACCGTCGGAAACGCACCTGCAGAAGAATCTCAAGAATCTATTGGCTGAGGCGCCCTAGACATTCGATTCAACAACCATCTCGCTCTGTTAAACCCTCAATTCACAGAAAGAGCAACAAAGAGGCAACCATGGCGACGTTAGTGGCGGCAACGATAGTTTCGATCAATCCTGCAAACGAGCTCCTCGCTTGCCCGGATGGCGCCCCGGTCCTTCTCTCCAGCTTCGCTAATCGAGAGGTGAGGCTGCTGCAACACGGTAGGAGCATTGTAGTTGAGGACGACCTAGATATTCGTTGGGAGGAGCTTGCTGGCGTGGTCGTGGACGAGGTCATTTTCTTCAGCCGGCATACTGCCGTTTCGAATCGTCCTGCCCTCACTGTTCATCGGATTGGTACGATTCCAGTGGAACAGAATAAGAACAATAAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCAGCTCTCGAAAGCTCATGTCTCGTAG

Homology

[Close]

BLAST of CmoCh05G004830 vs. Swiss-Prot
Match: GEK1_ARATH (D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GN=GEK1 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-23
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 59  MATLVAATIV---SINPANELLACPD--GAPVL---LSSFANREVRLLQHGRSIVVEDDL 118
           M TL+ AT     SINPA  LLA P     P+L   + SF+N++ R++QH RSIV EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 119 DIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQNKN 156
           D+RWEE  G VVDEVIF SRHTAVSNRPALTVH IG + ++  ++
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGES 105

[Close]

BLAST of CmoCh05G004830 vs. TrEMBL
Match: A0A0A0KGZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367180 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.1e-25
Identity = 70/95 (73.68%), Postives = 72/95 (75.79%), Query Frame = 1


Query: 59  MATLVAATI---VSINPANELLACPDGAP----VLLSSFANREVRLLQHGRSIVVEDDLD 118
           M TLV AT     SINPANELLA P  +P      + SFANR VRLLQH RSIVVEDDLD
Sbjct: 1   MVTLVVATTFDPASINPANELLAMPGWSPGPPLQEMKSFANRNVRLLQHDRSIVVEDDLD 60

Query: 119 IRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIG 147
            RWEEL G VVDEVIFFSRHTAVSNRPALTVH IG
Sbjct: 61  NRWEELTGEVVDEVIFFSRHTAVSNRPALTVHPIG 95

[Close]

BLAST of CmoCh05G004830 vs. TrEMBL
Match: D7LQL4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_322675 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-21
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 41  PSRSVKPSIHRKSNKEATMATLVAATI---VSINPANELLACPD--GAPVL---LSSFAN 100
           P +S++ +  R +     M TL+ AT     SINPA  LLA P     P+L   + SF+N
Sbjct: 27  PIKSLQNADFRVTVTTRKMVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSN 86

Query: 101 REVRLLQHGRSIVVEDDLDIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQ 156
           ++ R++QH RSIV EDDLD+RWEE  G V+DEVIF SRHTAVSNRPALTVH IG + ++ 
Sbjct: 87  KQTRVIQHDRSIVKEDDLDLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKD 146

[Close]

BLAST of CmoCh05G004830 vs. TrEMBL
Match: D7L8J8_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_673756 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-21
Identity = 59/105 (56.19%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 59  MATLVAATI---VSINPANELLACPD--GAPVL---LSSFANREVRLLQHGRSIVVEDDL 118
           M TL+ AT     SINPA  LLA P     P+L   + SF+N++ R++QH RSIV EDDL
Sbjct: 1   MVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 119 DIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQNKN 156
           D+RWEE  G V+DEVIF SRHTAVSNRPALTVH IG + ++  ++
Sbjct: 61  DLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGES 105

[Close]

BLAST of CmoCh05G004830 vs. TrEMBL
Match: V7CGG1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G280600g PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-21
Identity = 62/105 (59.05%), Postives = 72/105 (68.57%), Query Frame = 1


Query: 50  HRKSNKEATMATLVAATI---VSINPANELLACPDGAPVL-----LSSFANREVRLLQHG 109
           H+  + +ATM  L+ AT     SINPAN LLA P   P       + SF N  VR+L H 
Sbjct: 54  HKHFSTKATMVALLVATSSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGVRVLLHA 113

Query: 110 RSIVVEDDLDIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIG 147
           +SIVVEDDLD RWEE+ G VVDEVIFFS+HTAVSN+PALTVH IG
Sbjct: 114 KSIVVEDDLDRRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIG 158

[Close]

BLAST of CmoCh05G004830 vs. TrEMBL
Match: A0A087GUH7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G024800 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.1e-21
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 1


Query: 59  MATLVAATI---VSINPANELLACPD--GAPVL---LSSFANREVRLLQHGRSIVVEDDL 118
           M TL+ +T     SINPA  LL+ P     P+L   + SF+N++ RL+QH RSIV EDDL
Sbjct: 1   MVTLIVSTTNDPASINPATALLSMPGWISGPILPPDMKSFSNQKTRLIQHDRSIVREDDL 60

Query: 119 DIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQNK 155
           D+RWEE  G VVDEVIF SRHTAVSNRPALTVH IG + +++ +
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKEGE 104

[Close]

BLAST of CmoCh05G004830 vs. TAIR10
Match: AT2G03800.1 (AT2G03800.1 D-aminoacyl-tRNA deacylases)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 59  MATLVAATIV---SINPANELLACPD--GAPVL---LSSFANREVRLLQHGRSIVVEDDL 118
           M TL+ AT     SINPA  LLA P     P+L   + SF+N++ R++QH RSIV EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 119 DIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQNKN 156
           D+RWEE  G VVDEVIF SRHTAVSNRPALTVH IG + ++  ++
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGES 105

[Close]

BLAST of CmoCh05G004830 vs. NCBI nr
Match: gi|659089284|ref|XP_008445425.1| (PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 3.5e-25
Identity = 70/95 (73.68%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 59  MATLVAATI---VSINPANELLACPDGAP----VLLSSFANREVRLLQHGRSIVVEDDLD 118
           M TLV AT     SINPANELLA P  +P      + SFANR+VRLLQH RSIVVEDDLD
Sbjct: 1   MVTLVVATTFDPASINPANELLAMPGWSPGPPLQEMKSFANRDVRLLQHDRSIVVEDDLD 60

Query: 119 IRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIG 147
            RWEEL G VVDEVIFFSRHTAVSNRPALTVH IG
Sbjct: 61  NRWEELTGEVVDEVIFFSRHTAVSNRPALTVHPIG 95

[Close]

BLAST of CmoCh05G004830 vs. NCBI nr
Match: gi|778715526|ref|XP_011657410.1| (PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 6.0e-25
Identity = 70/95 (73.68%), Postives = 72/95 (75.79%), Query Frame = 1


Query: 59  MATLVAATI---VSINPANELLACPDGAP----VLLSSFANREVRLLQHGRSIVVEDDLD 118
           M TLV AT     SINPANELLA P  +P      + SFANR VRLLQH RSIVVEDDLD
Sbjct: 1   MVTLVVATTFDPASINPANELLAMPGWSPGPPLQEMKSFANRNVRLLQHDRSIVVEDDLD 60

Query: 119 IRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIG 147
            RWEEL G VVDEVIFFSRHTAVSNRPALTVH IG
Sbjct: 61  NRWEELTGEVVDEVIFFSRHTAVSNRPALTVHPIG 95

[Close]

BLAST of CmoCh05G004830 vs. NCBI nr
Match: gi|1011994690|ref|XP_015952725.1| (PREDICTED: D-aminoacyl-tRNA deacylase [Arachis duranensis])

HSP 1 Score: 110.2 bits (274), Expect = 4.0e-21
Identity = 67/118 (56.78%), Postives = 75/118 (63.56%), Query Frame = 1


Query: 37  SIQQPSRSVKPSIHRKSNKEATMATLVAATI---VSINPANELLACPDGAPVL-----LS 96
           S    S S   SI  K +  + M TL+ AT     SINPAN LLA P   P       + 
Sbjct: 56  SSSSSSSSSSNSIQVKHHHHSAMVTLLVATTSDPASINPANALLAMPAWQPGPHLQDDMK 115

Query: 97  SFANREVRLLQHGRSIVVEDDLDIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIG 147
           SF N  VR+L HG+SIVVEDDLD RWEE  G VVDEVIFFS+HTAVSN+PALTVH IG
Sbjct: 116 SFCNEGVRVLLHGKSIVVEDDLDKRWEEKTGEVVDEVIFFSKHTAVSNKPALTVHPIG 173

[Close]

BLAST of CmoCh05G004830 vs. NCBI nr
Match: gi|42568915|ref|NP_178474.2| (D-aminoacyl-tRNA deacylase [Arabidopsis thaliana])

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 59  MATLVAATIV---SINPANELLACPD--GAPVL---LSSFANREVRLLQHGRSIVVEDDL 118
           M TL+ AT     SINPA  LLA P     P+L   + SF+N++ R++QH RSIV EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 119 DIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQNKN 156
           D+RWEE  G VVDEVIF SRHTAVSNRPALTVH IG + ++  ++
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGES 105

[Close]

BLAST of CmoCh05G004830 vs. NCBI nr
Match: gi|297814690|ref|XP_002875228.1| (hypothetical protein ARALYDRAFT_322675 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 41  PSRSVKPSIHRKSNKEATMATLVAATI---VSINPANELLACPD--GAPVL---LSSFAN 100
           P +S++ +  R +     M TL+ AT     SINPA  LLA P     P+L   + SF+N
Sbjct: 27  PIKSLQNADFRVTVTTRKMVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSN 86

Query: 101 REVRLLQHGRSIVVEDDLDIRWEELAGVVVDEVIFFSRHTAVSNRPALTVHRIGTIPVEQ 156
           ++ R++QH RSIV EDDLD+RWEE  G V+DEVIF SRHTAVSNRPALTVH IG + ++ 
Sbjct: 87  KQTRVIQHDRSIVKEDDLDLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKD 146

The following BLAST results are available for this feature:

BLAST of CmoCh05G004830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GEK1_ARATH	3.3e-23	57.14	D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GN=GEK1 PE=1 SV=2	[more]

BLAST of CmoCh05G004830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGZ7_CUCSA	4.1e-25	73.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367180 PE=4 SV=1	[more]
D7LQL4_ARALL	3.6e-21	50.41	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
D7L8J8_ARALL	4.7e-21	56.19	Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_673756 PE=4 ...	[more]
V7CGG1_PHAVU	6.2e-21	59.05	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G280600g PE=4 SV=1	[more]
A0A087GUH7_ARAAL	8.1e-21	56.73	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G024800 PE=4 SV=1	[more]

BLAST of CmoCh05G004830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03800.1	1.8e-24	57.14	D-aminoacyl-tRNA deacylases	[more]

BLAST of CmoCh05G004830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089284\|ref\|XP_008445425.1\|	3.5e-25	73.68	PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis melo]	[more]
gi\|778715526\|ref\|XP_011657410.1\|	6.0e-25	73.68	PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis sativus]	[more]
gi\|1011994690\|ref\|XP_015952725.1\|	4.0e-21	56.78	PREDICTED: D-aminoacyl-tRNA deacylase [Arachis duranensis]	[more]
gi\|42568915\|ref\|NP_178474.2\|	5.2e-21	57.14	D-aminoacyl-tRNA deacylase [Arabidopsis thaliana]	[more]
gi\|297814690\|ref\|XP_002875228.1\|	5.2e-21	50.41	hypothetical protein ARALYDRAFT_322675 [Arabidopsis lyrata subsp. lyrata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007508	DtdA

Vocabulary: **Molecular Function**
Term	Definition
GO:0016788	hydrolase activity, acting on ester bonds
GO:0051499	D-aminoacyl-tRNA deacylase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0019478	D-amino acid catabolic process
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009636	response to toxic substance
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0051499	D-aminoacyl-tRNA deacylase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G004830.1	CmoCh05G004830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007508	D-aminoacyl-tRNA deacylase DtdA	PFAM	PF04414	tRNA_deacylase	coord: 121..148 score: 1.
None	No IPR available	GENE3D	G3DSA:3.40.50.10700		coord: 156..182 score: 7.
None	No IPR available	GENE3D	G3DSA:3.40.630.50		coord: 68..149 score: 5.9
None	No IPR available	PANTHER	PTHR34667	FAMILY NOT NAMED	coord: 59..147 score: 9.8
None	No IPR available	unknown	SSF142535	AF0625-like	coord: 68..178 score: 9.68

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G004830	Cucsa.328040	Cucumber (Gy14) v1	cgycmoB0907
CmoCh05G004830	CmaCh12G001130	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G004830	CmaCh05G004570	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G004830	Cla022043	Watermelon (97103) v1	cmowmB746
CmoCh05G004830	Csa6G367180	Cucumber (Chinese Long) v2	cmocuB796
CmoCh05G004830	MELO3C011402	Melon (DHL92) v3.5.1	cmomeB715
CmoCh05G004830	ClCG08G010600	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G004830	CSPI06G19870	Wild cucumber (PI 183967)	cmocpiB800
CmoCh05G004830	Lsi08G009130	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G004830	Cp4.1LG11g04020	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G004830	Cp4.1LG07g01000	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G004830	MELO3C011402.2	Melon (DHL92) v3.6.1	cmomedB812
CmoCh05G004830	CsaV3_6G033900	Cucumber (Chinese Long) v3	cmocucB0937
CmoCh05G004830	Cla97C08G153480	Watermelon (97103) v2	cmowmbB800
CmoCh05G004830	Bhi04G000937	Wax gourd	cmowgoB0941
CmoCh05G004830	CsGy6G019400	Cucumber (Gy14) v2	cgybcmoB825
CmoCh05G004830	Carg20574	Silver-seed gourd	carcmoB0894

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G004830	CmoCh12G000930	Cucurbita moschata (Rifu)	cmocmoB150

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G004830	Wax gourd	cmowgoB0951
CmoCh05G004830	Silver-seed gourd	carcmoB0196