CmoCh05G001270 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G001270
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr05 : 553372 .. 555528 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAGAGTCCATAAAATACATAGAAAGGCTCGGTCAATTTTTGTGATCTTTTGGATAATAGAAGTCACAAGAGTACTGGCGACGGTGAAGGCGAGGCAGAGGGAAAATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGGTAATTTTGACGATTCCTTAGATTGATAAAATTTATTGTGAATTTTGCTTATTGTTCTGTGGTTCTTCAGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTATGATTGTTCCTATGCCAAAATTTGATGTTCAATCTTCATTGGTTTTTTTCTTCCCTTGATGAATGGATTATTATAGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCAGTAAGTTTATCAGCCTTAATTGTGTTTGTTCAGTGCATCTTAGTTCTGAGTTCCAAAGTTGAACTGGTTTTAGTTTGGTTACTCCTGAATTAGAATTCTTGTTGGAAAGGCCAGCTTCAGTTCTTATCTGAATAACACTACAACTTTTGGGTTTCCCAAGTGATGGATTGTAAACACTGAAAAAGCCACCTTTAAAAATATAGAACCAAGCATCAATATAATTTATCATTATACACTTTTTACATAAATATTTTTGATTAAAGAACTTTTGTCTAAAGTAGCACTCCCAAATCCTTGAACTAAATCTTTGTTTGCTGAAAAATAATGGTTTCCTTCATTTTTACCACTAAAGGCTAGAGTTGAGTTGTTCACATGAAAATACCATTGAACTAAGGCCGCCATCACAAGCAAATTTGTGTTTTCTTATTTATGATGTTCATGTGATCTTGGGTTGCCTTTCGCGTTCTTAACTCATTATAGATAACGATATCGTGACTCATTGTTCCCCGTTTGTCCTATGAATTCTGAAGTGTGGGCATTATAGATAGAGCTTGGTTCTTACCATCAGCACAAAAGATCACTTTGCTCTGTATGCCTACTGCAGCTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGGTGCCTATTTATGCCATTCCTTGTCATGAATGCTTCTTTGCAAACTGCTTATTTCTATCTTTAACTAGATACTTAACTGGTATCACGTGATGGGTTGGATAATCACACCTGAACGACATCTCGGTAAAATCTTCATCGTTTCTGAATACAATTGATATGACAATCTTCAAAAATGATTCATTTTCATTTTCATTTTCATTTTCATTTTCTTCCACGACTTGCATTCTCATGTCAATTGCTTTTGGTTACATAATCCTAACAGAAGTTATGTTGTGCAGTTGTTGACATCATTGGTGAGAAGGTGGTGATGAGGGAAAAACATCCCATTTGCTTGTATCATATTTTTTTTCTTTAAAGGGACCTTATAAACTAACTGGTAAGAGTCCCTCTACTTATGAACGAAATGTGTAATTCTCTAATCCAAGTTTTGTTGATTTATGTATCCTCTGACTTACTTTGTTCATACAAGGAAAGTTCGATAATCAATAGTGAGCTCTCTTTGTTGTCTAACAACCTTTAGATTACTCAATTCTCTTGAGAATGAA

mRNA sequence

TAAAGAGTCCATAAAATACATAGAAAGGCTCGGTCAATTTTTGTGATCTTTTGGATAATAGAAGTCACAAGAGTACTGGCGACGGTGAAGGCGAGGCAGAGGGAAAATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCACTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGTTGTTGACATCATTGGTGAGAAGGTGGTGATGAGGGAAAAACATCCCATTTGCTTGTATCATATTTTTTTTCTTTAAAGGGACCTTATAAACTAACTGGTAAGAGTCCCTCTACTTATGAACGAAATGTGTAATTCTCTAATCCAAGTTTTGTTGATTTATGTATCCTCTGACTTACTTTGTTCATACAAGGAAAGTTCGATAATCAATAGTGAGCTCTCTTTGTTGTCTAACAACCTTTAGATTACTCAATTCTCTTGAGAATGAA

Coding sequence (CDS)

ATGTTGCCACTGAGCCAAGCTCCGGCCGGCGTTTTACCGGCCAGAAAGTTCTCCTTAACCACGCTTCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGGCGCTCTAAGTTTATTCCTAGAAGAAATCCTGCGAAACCTCTTAATATCACTCTTTCCAAAGCGGAAGGAACCGTCGATTCGACGAAACAGGCTGTTTCCAACTCTCCAAGTCCGCCTCCTTTTCCTACTGACCAAACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGAGTTATTCAGTTCGATAAGCCCAATACGTCGTCTCGTTTGAGCAAATGGGGCCGCGTGGCTCTGCTGGCTGGTGGAGATGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGAAGATTCACCCATGGTTTCCCTGTTTTTGATTTCGAGACAGTACGCACGGCTGACCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGTGGTTATGGAGAGGATGGTCGTGGGATGAATGGTTATTCCAAGGCTGTTATTGCCGCTTCCAAATCATGGGCTTTGGGAATTCCACTAGGTCTACTAGTTCGGGTAGCAACATCCGGCCATCTTCCGCCATATAATTTCATAGGAGTGACGATGGGAAGCACGGCTGTTTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAACAACAGCAAGAAGAGTGATGTCTATCGGCGTGGCAACCCATTTGAACTATTTGAGTTGTTGACATCATTGGTGAGAAGGTGGTGA
Homology
[Close]
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0A0LKI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354020 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-135
Identity = 237/260 (91.15%), Postives = 252/260 (96.92%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60
           MLPLSQ PAGVLPAR+ SL+T+PSLKFSNPNPFRRSKFIPRRNP KP NITLSKAEGTVD
Sbjct: 1   MLPLSQTPAGVLPARRLSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPFNITLSKAEGTVD 60

Query: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120
           STKQA+SNSP+PPPFP DQTVFVGDE+VPLEGVIQFDKPNTSSRL+KWGRVA LAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPNDQTVFVGDENVPLEGVIQFDKPNTSSRLTKWGRVAFLAGGDVL 120

Query: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180
           ALLLFSSIGRF+HG PVFDFET+RTADPFIAGWFLSAYFLGGYG+DGRG+NGYSKAV+AA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVAA 180

Query: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240
           +KSWALGIPLGLLVR ATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPV+NSKK+DV
Sbjct: 181 TKSWALGIPLGLLVRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKNDV 240

Query: 241 YRRGNPFELFELLTSLVRRW 261
           YRRGNPFELFELLTSLVRRW
Sbjct: 241 YRRGNPFELFELLTSLVRRW 260

[Close]
BLAST of CmoCh05G001270 vs. TrEMBL
Match: M5XDA7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009971mg PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.5e-100
Identity = 189/271 (69.74%), Postives = 227/271 (83.76%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNP----FRRSKFIPRRNPAKPLNITLSKAE 60
           ML L QAP+G L AR+ SL++ P  KF+NPNP     R+ +F  + NP+K LNITL+KA+
Sbjct: 1   MLVLGQAPSGALSARRCSLSSPP--KFTNPNPPLFSNRKPRFASKANPSKSLNITLAKAD 60

Query: 61  GTVDST----KQAVSNSPSPPPFPT---DQTVFVGDESVPLEGVIQFDKPNTSSRLSKWG 120
           G +DST    KQA S+SP+PPP P+   DQ V VG E++PLEGVIQF+KP++SSRL KWG
Sbjct: 61  GGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVVVGQENIPLEGVIQFEKPSSSSRLRKWG 120

Query: 121 RVALLAGGDVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRG 180
           RVALLAGGDVLALL F++IGRF+HGF VF+FET+RTADPFIAGWFLSAYFLGGYG+DGRG
Sbjct: 121 RVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYGKDGRG 180

Query: 181 MNGYSKAVIAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKV 240
           +NG SKA+ A +KSWALGIPLG+++R +T+GHLPPY FI VTMGSTAVLL+GWRA+LYK 
Sbjct: 181 VNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRALLYKF 240

Query: 241 FPVNNSKKSDVYRRGNPFELFELLTSLVRRW 261
            P + SKKSDVYRRG+PFELFELLTSLVRRW
Sbjct: 241 LPGDKSKKSDVYRRGSPFELFELLTSLVRRW 269

[Close]
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0B0PPB7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06792 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-92
Identity = 174/261 (66.67%), Postives = 210/261 (80.46%), Query Frame = 1 

Query: 4   LSQAPAGVLPARKFSLTTLPSLK--FSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVDS 63
           L   P+G L A+K SL     +K   SN +  +R KFIP RNP KPL ITL+KAEG +DS
Sbjct: 3   LISCPSGALSAKKCSLKFTVPIKPSISNSSIHKRPKFIPSRNPRKPLQITLAKAEGGLDS 62

Query: 64  TKQAVSNSPSPPPFP-TDQTVFVGDESVPLEGVIQFDKPNTSS-RLSKWGRVALLAGGDV 123
             +   +SP PPPF  +D TVFVG + VPLEGVIQF+KP++SS  LSKWGRVALLAGGDV
Sbjct: 63  APK--QSSPPPPPFNNSDDTVFVGQDDVPLEGVIQFEKPSSSSSHLSKWGRVALLAGGDV 122

Query: 124 LALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIA 183
           LALLLFS+IGR+ HG P+F  +T+RTADPF+AGWFLSAYFLGGY EDGRG NG S+A+IA
Sbjct: 123 LALLLFSAIGRYNHGLPIFAMDTIRTADPFLAGWFLSAYFLGGYSEDGRGANGLSQALIA 182

Query: 184 ASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSD 243
           A++SW LGIPLGL++R ATSGH+PPY F+ VTMGST+VLLIGWRA++  +FP +  KK+D
Sbjct: 183 AARSWGLGIPLGLIIRAATSGHVPPYAFVLVTMGSTSVLLIGWRALIVSIFPDDTKKKND 242

Query: 244 VYRRGNPFELFELLTSLVRRW 261
           VYRRG+PFELFELLTSL+RRW
Sbjct: 243 VYRRGSPFELFELLTSLIRRW 261

[Close]
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A061FEE6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_034653 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.5e-92
Identity = 174/264 (65.91%), Postives = 208/264 (78.79%), Query Frame = 1 

Query: 4   LSQAPAGVLPARKFSLTTLPSLK--FSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVDS 63
           L  +P+G L ARK SL     ++  +SN    RR K IP RN  KPL++T +KAEG +DS
Sbjct: 3   LLSSPSGALSARKCSLKFTAPIQPLYSNSATSRRPKLIPTRNSPKPLHLTFAKAEGGLDS 62

Query: 64  TKQAVS----NSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGG 123
              + S    + P PPPF  + TVFVG E VPLEGVIQF+KP++SS L KWGRVALLAGG
Sbjct: 63  ASASASAPKQSPPPPPPFNNNDTVFVGQEDVPLEGVIQFEKPSSSSHLIKWGRVALLAGG 122

Query: 124 DVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAV 183
           DVLALLLFS+IGR+ HG P+F  +T+RTADPF+AGWFLSAYFLGGYGEDGRG NG S+AV
Sbjct: 123 DVLALLLFSAIGRYNHGLPIFAMDTLRTADPFMAGWFLSAYFLGGYGEDGRGANGLSQAV 182

Query: 184 IAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFP-VNNSK 243
           IAA+KSWALGIPLGL++R ATSGH+PPY F+ VTMGST+VLLIGWRA++  +FP     K
Sbjct: 183 IAAAKSWALGIPLGLIIRAATSGHIPPYPFVLVTMGSTSVLLIGWRALVISIFPDETKKK 242

Query: 244 KSDVYRRGNPFELFELLTSLVRRW 261
           K+DVYRRG+PFELFELLTSL+RRW
Sbjct: 243 KNDVYRRGSPFELFELLTSLIRRW 266

[Close]
BLAST of CmoCh05G001270 vs. TrEMBL
Match: A0A0D2R0X1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G028000 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 5.6e-92
Identity = 177/265 (66.79%), Postives = 211/265 (79.62%), Query Frame = 1 

Query: 4   LSQAPAGVLPARKFSLT-TLP-SLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVDS 63
           L   P+G L A+K SL  T+P     SN +  +R KFIP RN  KPL ITL+KAEG +DS
Sbjct: 3   LISCPSGALSAKKCSLKFTVPIQPSISNSSIHKRPKFIPSRNSRKPLQITLAKAEGGLDS 62

Query: 64  TKQAVSNSPSPPPFPT-----DQTVFVGDESVPLEGVIQFDKPN-TSSRLSKWGRVALLA 123
             +   +SP PPP P+     D TVFVG + VPLEGVIQF+KP+ +SSRLSKWGRVALLA
Sbjct: 63  APK--QSSPPPPPSPSPFNNGDDTVFVGQDDVPLEGVIQFEKPSSSSSRLSKWGRVALLA 122

Query: 124 GGDVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSK 183
           GGDVLALLLFS+IGR+ HG P+F  +T+RTADPF+AGWFLSAYFLGGY EDGRG NG S+
Sbjct: 123 GGDVLALLLFSAIGRYNHGLPIFAMDTIRTADPFLAGWFLSAYFLGGYSEDGRGANGLSQ 182

Query: 184 AVIAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNS 243
           A+IAA+KSW LGIPLGL++R ATSGH+PPY F+ VTMGST+VLLIGWRA++  +FP +  
Sbjct: 183 ALIAAAKSWGLGIPLGLIIRAATSGHVPPYAFVLVTMGSTSVLLIGWRALIVSIFPDDTK 242

Query: 244 KKSDVYRRGNPFELFELLTSLVRRW 261
           KK+DVYRRG+PFELFELLTSLVRRW
Sbjct: 243 KKNDVYRRGSPFELFELLTSLVRRW 265

[Close]
BLAST of CmoCh05G001270 vs. TAIR10
Match: AT1G44920.1 (AT1G44920.1 unknown protein)

HSP 1 Score: 297.4 bits (760), Expect = 8.8e-81
Identity = 153/258 (59.30%), Postives = 197/258 (76.36%), Query Frame = 1 

Query: 6   QAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKP-LNITLSKAEGTVDSTKQ 65
           + P G + A +F   + PS  FS+P+ +      P  + ++P + + LS  +G+V+S   
Sbjct: 7   RTPTGPVSAVRFITKSKPS-PFSSPDSWLLPA--PNTHRSRPRVVLALSNPDGSVNSKP- 66

Query: 66  AVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPN--TSSRLSKWGRVALLAGGDVLAL 125
             S S S  P   D+TVFVG ++VPLEGVIQFDKP+  +SS ++KWGRVALLAGGDVLAL
Sbjct: 67  --STSASQIPSSGDETVFVGQDNVPLEGVIQFDKPSSTSSSNITKWGRVALLAGGDVLAL 126

Query: 126 LLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAASK 185
           L+FS+IGRF+HGFPVF  +T+ TADPFIAGWFLSAYFLGGY E+GRGM G SKAV+AA+K
Sbjct: 127 LIFSAIGRFSHGFPVFSLDTLHTADPFIAGWFLSAYFLGGYAEEGRGMKGKSKAVVAAAK 186

Query: 186 SWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDVYR 245
           SW +G PLG+++R A+SGH+P Y+F+ VTMGSTAVLLIGWRA+L+ V P  + KK D YR
Sbjct: 187 SWIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYR 246

Query: 246 RGNPFELFELLTSLVRRW 261
           +G+ FELFELLTSL+RRW
Sbjct: 247 KGSAFELFELLTSLIRRW 258

[Close]
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|659087566|ref|XP_008444522.1| (PREDICTED: uncharacterized protein LOC103487814 [Cucumis melo])

HSP 1 Score: 493.8 bits (1270), Expect = 1.8e-136
Identity = 241/260 (92.69%), Postives = 254/260 (97.69%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60
           MLPL+QAPAGVLPAR+FSL+T+PSLKFSNPNPFRRSKFIPRRNP KPLNITLSKAEGTVD
Sbjct: 1   MLPLTQAPAGVLPARRFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120
           STKQA+SNSP+PPPFPTDQTVFVGDE+VPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180
           ALLLFSSIGRF+HG PVFDFET+RTADPFIAGWFLSAYFLGGYG+DGRG+NGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIAA 180

Query: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240
           SKSWALGIPLGLLVR ATSG LPPY FIGVTMGSTAVLLIGWRAILYKVFPV+N KK+DV
Sbjct: 181 SKSWALGIPLGLLVRAATSGRLPPYTFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKNDV 240

Query: 241 YRRGNPFELFELLTSLVRRW 261
           YRRGNPFELFELLTSLVRRW
Sbjct: 241 YRRGNPFELFELLTSLVRRW 260

[Close]
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|449450308|ref|XP_004142905.1| (PREDICTED: uncharacterized protein LOC101212562 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 2.0e-135
Identity = 237/260 (91.15%), Postives = 252/260 (96.92%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60
           MLPLSQ PAGVLPAR+ SL+T+PSLKFSNPNPFRRSKFIPRRNP KP NITLSKAEGTVD
Sbjct: 1   MLPLSQTPAGVLPARRLSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPFNITLSKAEGTVD 60

Query: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120
           STKQA+SNSP+PPPFP DQTVFVGDE+VPLEGVIQFDKPNTSSRL+KWGRVA LAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPNDQTVFVGDENVPLEGVIQFDKPNTSSRLTKWGRVAFLAGGDVL 120

Query: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180
           ALLLFSSIGRF+HG PVFDFET+RTADPFIAGWFLSAYFLGGYG+DGRG+NGYSKAV+AA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVVAA 180

Query: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240
           +KSWALGIPLGLLVR ATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPV+NSKK+DV
Sbjct: 181 TKSWALGIPLGLLVRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNSKKNDV 240

Query: 241 YRRGNPFELFELLTSLVRRW 261
           YRRGNPFELFELLTSLVRRW
Sbjct: 241 YRRGNPFELFELLTSLVRRW 260

[Close]
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|645227205|ref|XP_008220404.1| (PREDICTED: uncharacterized protein LOC103320498 [Prunus mume])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100
Identity = 190/271 (70.11%), Postives = 227/271 (83.76%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNP----FRRSKFIPRRNPAKPLNITLSKAE 60
           ML L QAP+G L AR+ SL++ P  KF NPNP     R+ +F  + NP+K LNITL+KA+
Sbjct: 1   MLVLGQAPSGALSARRCSLSSPP--KFINPNPPLFSNRKPRFASKTNPSKSLNITLAKAD 60

Query: 61  GTVDST----KQAVSNSPSPPPFPT---DQTVFVGDESVPLEGVIQFDKPNTSSRLSKWG 120
           G +DST    KQA S+SP+PPP P+   DQ VFVG E++PLEGVIQF+KP++SSRL KWG
Sbjct: 61  GGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVFVGQENIPLEGVIQFEKPSSSSRLRKWG 120

Query: 121 RVALLAGGDVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRG 180
           RVALLAGGDVLALL F++IGRF+HGF VF+FET+RTADPFIAGWFLSAYFLGGYG+DGRG
Sbjct: 121 RVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYGKDGRG 180

Query: 181 MNGYSKAVIAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKV 240
           +NG SKA+ A +KSWALGIPLG+++R +T+GHLPPY FI VTMGSTAVLL+GWRA+LYK 
Sbjct: 181 VNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRALLYKF 240

Query: 241 FPVNNSKKSDVYRRGNPFELFELLTSLVRRW 261
            P + SKKSDVYRRG+PFELFELLTSLVRRW
Sbjct: 241 LPGDKSKKSDVYRRGSPFELFELLTSLVRRW 269

[Close]
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|596159324|ref|XP_007222898.1| (hypothetical protein PRUPE_ppa009971mg [Prunus persica])

HSP 1 Score: 373.2 bits (957), Expect = 3.6e-100
Identity = 189/271 (69.74%), Postives = 227/271 (83.76%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNP----FRRSKFIPRRNPAKPLNITLSKAE 60
           ML L QAP+G L AR+ SL++ P  KF+NPNP     R+ +F  + NP+K LNITL+KA+
Sbjct: 1   MLVLGQAPSGALSARRCSLSSPP--KFTNPNPPLFSNRKPRFASKANPSKSLNITLAKAD 60

Query: 61  GTVDST----KQAVSNSPSPPPFPT---DQTVFVGDESVPLEGVIQFDKPNTSSRLSKWG 120
           G +DST    KQA S+SP+PPP P+   DQ V VG E++PLEGVIQF+KP++SSRL KWG
Sbjct: 61  GGIDSTSAATKQAFSSSPAPPPPPSLDNDQPVVVGQENIPLEGVIQFEKPSSSSRLRKWG 120

Query: 121 RVALLAGGDVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRG 180
           RVALLAGGDVLALL F++IGRF+HGF VF+FET+RTADPFIAGWFLSAYFLGGYG+DGRG
Sbjct: 121 RVALLAGGDVLALLTFAAIGRFSHGFSVFEFETLRTADPFIAGWFLSAYFLGGYGKDGRG 180

Query: 181 MNGYSKAVIAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKV 240
           +NG SKA+ A +KSWALGIPLG+++R +T+GHLPPY FI VTMGSTAVLL+GWRA+LYK 
Sbjct: 181 VNGQSKALTATAKSWALGIPLGIIIRASTAGHLPPYKFILVTMGSTAVLLLGWRALLYKF 240

Query: 241 FPVNNSKKSDVYRRGNPFELFELLTSLVRRW 261
            P + SKKSDVYRRG+PFELFELLTSLVRRW
Sbjct: 241 LPGDKSKKSDVYRRGSPFELFELLTSLVRRW 269

[Close]
BLAST of CmoCh05G001270 vs. NCBI nr
Match: gi|694312155|ref|XP_009361155.1| (PREDICTED: uncharacterized protein LOC103951492 [Pyrus x bretschneideri])

HSP 1 Score: 356.3 bits (913), Expect = 4.5e-95
Identity = 181/273 (66.30%), Postives = 217/273 (79.49%), Query Frame = 1 

Query: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNP-----FRRSKFIPRRNPAKPLNITLSKA 60
           ML L QAP+G L  R+  LT+ P  KFSNPNP      R S+F    NP+K LNITL+KA
Sbjct: 3   MLVLGQAPSGALSTRRCYLTSPP--KFSNPNPPLFSSHRPSRFFSNVNPSKSLNITLAKA 62

Query: 61  EGTVDSTKQA------VSNSPSPPPFPT--DQTVFVGDESVPLEGVIQFDKPNTSSRLSK 120
           +G VDS   A       S++P PPP P+  +Q VFVG E++PLEGVIQF+KP++S+RL K
Sbjct: 63  DGGVDSASSADKQGFSASSAPPPPPPPSVDNQPVFVGQENIPLEGVIQFEKPDSSARLRK 122

Query: 121 WGRVALLAGGDVLALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDG 180
           WG VALLAGGDVLALL F+ IGRF+HGFPVF+FET+RTADPFIAGWFLSAYFLGG+GEDG
Sbjct: 123 WGHVALLAGGDVLALLTFAVIGRFSHGFPVFEFETLRTADPFIAGWFLSAYFLGGFGEDG 182

Query: 181 RGMNGYSKAVIAASKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILY 240
           RG+NG SKA+ A + SWALGIPLG+++R +T+GH+PP  F+ VTMGST VLL+GWRA+LY
Sbjct: 183 RGVNGQSKALTATAMSWALGIPLGIIIRASTAGHIPPIKFVLVTMGSTGVLLVGWRALLY 242

Query: 241 KVFPVNNSKKSDVYRRGNPFELFELLTSLVRRW 261
           K  P + SKKSDVYRRG+PFELFELLTSLVRRW
Sbjct: 243 KFLPGDKSKKSDVYRRGSPFELFELLTSLVRRW 273

The following BLAST results are available for this feature:
BLAST of CmoCh05G001270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh05G001270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKI7_CUCSA1.4e-13591.15Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354020 PE=4 SV=1[more]
M5XDA7_PRUPE2.5e-10069.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009971mg PE=4 SV=1[more]
A0A0B0PPB7_GOSAR1.9e-9266.67Uncharacterized protein OS=Gossypium arboreum GN=F383_06792 PE=4 SV=1[more]
A0A061FEE6_THECC2.5e-9265.91Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_034653 PE=4 SV=1[more]
A0A0D2R0X1_GOSRA5.6e-9266.79Uncharacterized protein OS=Gossypium raimondii GN=B456_010G028000 PE=4 SV=1[more]
BLAST of CmoCh05G001270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G44920.18.8e-8159.30 unknown protein[more]
BLAST of CmoCh05G001270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087566|ref|XP_008444522.1|1.8e-13692.69PREDICTED: uncharacterized protein LOC103487814 [Cucumis melo][more]
gi|449450308|ref|XP_004142905.1|2.0e-13591.15PREDICTED: uncharacterized protein LOC101212562 [Cucumis sativus][more]
gi|645227205|ref|XP_008220404.1|1.2e-10070.11PREDICTED: uncharacterized protein LOC103320498 [Prunus mume][more]
gi|596159324|ref|XP_007222898.1|3.6e-10069.74hypothetical protein PRUPE_ppa009971mg [Prunus persica][more]
gi|694312155|ref|XP_009361155.1|4.5e-9566.30PREDICTED: uncharacterized protein LOC103951492 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021414DUF3054
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044763 single-organism cellular process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G001270.1CmoCh05G001270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021414Protein of unknown function DUF3054PFAMPF11255DUF3054coord: 116..225
score: 3.7
NoneNo IPR availablePANTHERPTHR35283FAMILY NOT NAMEDcoord: 6..260
score: 1.7E
NoneNo IPR availablePANTHERPTHR35283:SF2SUBFAMILY NOT NAMEDcoord: 6..260
score: 1.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G001270Cucsa.395420Cucumber (Gy14) v1cgycmoB1093
CmoCh05G001270CmaCh12G006130Cucurbita maxima (Rimu)cmacmoB199
CmoCh05G001270CmaCh05G001230Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G001270Cla022647Watermelon (97103) v1cmowmB748
CmoCh05G001270Csa2G354020Cucumber (Chinese Long) v2cmocuB777
CmoCh05G001270MELO3C010785Melon (DHL92) v3.5.1cmomeB718
CmoCh05G001270ClCG08G016710Watermelon (Charleston Gray)cmowcgB716
CmoCh05G001270CSPI02G18330Wild cucumber (PI 183967)cmocpiB782
CmoCh05G001270Lsi08G015460Bottle gourd (USVL1VR-Ls)cmolsiB731
CmoCh05G001270Cp4.1LG11g01220Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G001270Cp4.1LG07g04740Cucurbita pepo (Zucchini)cmocpeB750
CmoCh05G001270MELO3C010785.2Melon (DHL92) v3.6.1cmomedB815
CmoCh05G001270CsaV3_2G025920Cucumber (Chinese Long) v3cmocucB0918
CmoCh05G001270Bhi04G000419Wax gourdcmowgoB0944
CmoCh05G001270CsGy2G018250Cucumber (Gy14) v2cgybcmoB238
CmoCh05G001270Carg16380Silver-seed gourdcarcmoB0617
CmoCh05G001270Carg11899Silver-seed gourdcarcmoB0263
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G001270CmoCh12G005490Cucurbita moschata (Rifu)cmocmoB156
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G001270Cucurbita pepo (Zucchini)cmocpeB734
CmoCh05G001270Cucurbita pepo (Zucchini)cmocpeB740
CmoCh05G001270Bottle gourd (USVL1VR-Ls)cmolsiB709
CmoCh05G001270Bottle gourd (USVL1VR-Ls)cmolsiB715
CmoCh05G001270Cucumber (Gy14) v2cgybcmoB533
CmoCh05G001270Cucumber (Gy14) v2cgybcmoB953
CmoCh05G001270Melon (DHL92) v3.6.1cmomedB826
CmoCh05G001270Melon (DHL92) v3.6.1cmomedB833
CmoCh05G001270Silver-seed gourdcarcmoB0443
CmoCh05G001270Silver-seed gourdcarcmoB1047
CmoCh05G001270Cucumber (Chinese Long) v3cmocucB0933
CmoCh05G001270Cucumber (Chinese Long) v3cmocucB0946
CmoCh05G001270Cucumber (Chinese Long) v3cmocucB0949
CmoCh05G001270Watermelon (97103) v2cmowmbB778
CmoCh05G001270Watermelon (97103) v2cmowmbB802
CmoCh05G001270Wax gourdcmowgoB0957
CmoCh05G001270Wax gourdcmowgoB0960
CmoCh05G001270Cucurbita maxima (Rimu)cmacmoB483
CmoCh05G001270Cucurbita moschata (Rifu)cmocmoB033
CmoCh05G001270Cucurbita moschata (Rifu)cmocmoB369
CmoCh05G001270Cucurbita moschata (Rifu)cmocmoB482
CmoCh05G001270Cucumber (Gy14) v1cgycmoB0969
CmoCh05G001270Cucurbita maxima (Rimu)cmacmoB062
CmoCh05G001270Wild cucumber (PI 183967)cmocpiB795
CmoCh05G001270Cucumber (Chinese Long) v2cmocuB792
CmoCh05G001270Melon (DHL92) v3.5.1cmomeB709
CmoCh05G001270Melon (DHL92) v3.5.1cmomeB729