CmoCh01G012300 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G012300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr01 : 9869647 .. 9870582 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCTTCGCTGCAACCAAATCGAAGAAGAAGTTCTTTCCGTGTTTCCGATCGACGGCTTCCAGCGGCCCTGTTAGGACGGTGCGAGGTATGAACGCTGCAGACGAACAGGTTTTTCCGTTCATGGCGGTGGAAGAGAGGAACGGTATGATGCTTCACAATGTGCAGCCGTTTGATGGATGCGGCAACGTTTCTGGTCGCCAGAAAAAGGGAGGCGGTGGTGGTGCTTTGTCGCGTGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGTTTGTCCGCTGATTCTGACAGCTTTTGAAATGAAACGCTAATTTCGTTCTCTGTTTTTCTTTTTCTATGGTTGACATTTTTCGATTAATCGATTGATTTTCCTAACGCGGATATCGGATGTTCTTTGAGTGTTGCAGGCGAAGAAGATCAGAAAAAAGAAACGAAAACAAAAGGAAAATTCGAATGAGGAGAATCAGAGACGTCGACTTCTGTCTTCAATTAGCAGCAGATCATCAGATCCAAATTTCCGCAACTCTTCTACCTGTTCTTCGCGCACTTCTGCGCCATTTTCATCCGCCTCATTCTGCAGTTCGTCTCCTACCTCCCCGGAAATCAAAGAAATATCATTTCGATTTCATCCAACTGCCTCGAATCGCTTGTTCAGGCAGATTAATCTCAGAAAAACCTCCCGCTGTTGGTTTGTTCTATTGGTAGGTCTTCTAAGCTTGGTTTTATGGGAAAAAATCGGAGCTACTGTGTGCACTTCGATTTGGATCCTCTGTTTCCATTTTTACCGCCGTGAAATCGGATTCAGGTCGCCGGACGACAAGGCCAGTGCGGCGGCCATGAGTTCCGACGAATACAAGAAGAGAACCATCCTGGAAGGATTTCTGAACAGAGATCGTTCGGCTGTTCGTAATTCAATCACACACATTGATTGA

mRNA sequence

ATGGACTCCTTCGCTGCAACCAAATCGAAGAAGAAGTTCTTTCCGTGTTTCCGATCGACGGCTTCCAGCGGCCCTGTTAGGACGGTGCGAGGTATGAACGCTGCAGACGAACAGGTTTTTCCGTTCATGGCGGTGGAAGAGAGGAACGGTATGATGCTTCACAATGTGCAGCCGTTTGATGGATGCGGCAACGTTTCTGGTCGCCAGAAAAAGGGAGGCGGTGGTGGTGCTTTGTCGCGTGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGCGAAGAAGATCAGAAAAAAGAAACGAAAACAAAAGGAAAATTCGAATGAGGAGAATCAGAGACGTCGACTTCTGTCTTCAATTAGCAGCAGATCATCAGATCCAAATTTCCGCAACTCTTCTACCTGTTCTTCGCGCACTTCTGCGCCATTTTCATCCGCCTCATTCTGCAGTTCGTCTCCTACCTCCCCGGAAATCAAAGAAATATCATTTCGATTTCATCCAACTGCCTCGAATCGCTTGTTCAGGCAGATTAATCTCAGAAAAACCTCCCGCTGTTGGTTTGTTCTATTGGTAGGTCTTCTAAGCTTGGTTTTATGGGAAAAAATCGGAGCTACTGTGTGCACTTCGATTTGGATCCTCTGTTTCCATTTTTACCGCCGTGAAATCGGATTCAGGTCGCCGGACGACAAGGCCAGTGCGGCGGCCATGAGTTCCGACGAATACAAGAAGAGAACCATCCTGGAAGGATTTCTGAACAGAGATCGTTCGGCTGTTCGTAATTCAATCACACACATTGATTGA

Coding sequence (CDS)

ATGGACTCCTTCGCTGCAACCAAATCGAAGAAGAAGTTCTTTCCGTGTTTCCGATCGACGGCTTCCAGCGGCCCTGTTAGGACGGTGCGAGGTATGAACGCTGCAGACGAACAGGTTTTTCCGTTCATGGCGGTGGAAGAGAGGAACGGTATGATGCTTCACAATGTGCAGCCGTTTGATGGATGCGGCAACGTTTCTGGTCGCCAGAAAAAGGGAGGCGGTGGTGGTGCTTTGTCGCGTGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGCGAAGAAGATCAGAAAAAAGAAACGAAAACAAAAGGAAAATTCGAATGAGGAGAATCAGAGACGTCGACTTCTGTCTTCAATTAGCAGCAGATCATCAGATCCAAATTTCCGCAACTCTTCTACCTGTTCTTCGCGCACTTCTGCGCCATTTTCATCCGCCTCATTCTGCAGTTCGTCTCCTACCTCCCCGGAAATCAAAGAAATATCATTTCGATTTCATCCAACTGCCTCGAATCGCTTGTTCAGGCAGATTAATCTCAGAAAAACCTCCCGCTGTTGGTTTGTTCTATTGGTAGGTCTTCTAAGCTTGGTTTTATGGGAAAAAATCGGAGCTACTGTGTGCACTTCGATTTGGATCCTCTGTTTCCATTTTTACCGCCGTGAAATCGGATTCAGGTCGCCGGACGACAAGGCCAGTGCGGCGGCCATGAGTTCCGACGAATACAAGAAGAGAACCATCCTGGAAGGATTTCTGAACAGAGATCGTTCGGCTGTTCGTAATTCAATCACACACATTGATTGA

Homology

[Close]

BLAST of CmoCh01G012300 vs. TrEMBL
Match: A0A0A0LIJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851180 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.8e-33
Identity = 105/187 (56.15%), Postives = 124/187 (66.31%), Query Frame = 1


Query: 1   MDSFAATKSKKK--FFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60
           MD+ A  K KKK   FPCFRS AS G    VR  + + E VFPF+ V+E       NV+P
Sbjct: 1   MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGS-EDVFPFITVDE-------NVRP 60

Query: 61  FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKENSNEE-NQRRRLLS 120
             G    SG +KK G  GA SRALKAVLFGTSLAKKIRK+K K+ +NS +E NQR +  S
Sbjct: 61  LYGGDGDSGHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPS 120

Query: 121 SIS---SRSSDPN---FRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASNR 179
           SI    SR++  N   +RNSST SSRTSAPFSS+SFCSSSP S E+ EISFRF+P  SNR
Sbjct: 121 SIGNNRSRTASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNR 179

[Close]

BLAST of CmoCh01G012300 vs. TrEMBL
Match: B9SIH0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1256160 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08
Identity = 77/265 (29.06%), Postives = 124/265 (46.79%), Query Frame = 1


Query: 8   KSKKKFFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQPFDGCGNVSG 67
           K+  K F C R       +   +G  AA  QV   + +E ++G++  +V P         
Sbjct: 16  KTNNKLFLCLRPAVVEDFLANSKGGTAAS-QVLKLIDMERKDGVLFPSVYPSPEGDAAIA 75

Query: 68  RQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKEN-------SNEENQRRRLLSSIS 127
           RQ K      L RA+KAV F TSLAKKI+K+   +K+        SN +     +   + 
Sbjct: 76  RQNKKSKKKFL-RAVKAVFFETSLAKKIKKRTSTKKKKYSTGETISNVDKDLDLVKEKLL 135

Query: 128 SRSSDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRF------HPTASNRLFR 187
            +     F   +  S    +  +S+S CSS+P+    K    R       +P   N + +
Sbjct: 136 HQKLSKKFTGRNIVSYYAPS-VNSSSVCSSAPSLNNSKRFLERVISLGPSNPILENNIKK 195

Query: 188 QINLRK---TSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFR-SPDDKA 247
           Q N +    ++   F+LLV L  LVLW K+ A +CTS W+     +    G +   + + 
Sbjct: 196 QENGKGHYGSNTGLFLLLVTLTVLVLWGKVYAILCTSTWLFFVPNWSNVSGKKLLKNGRV 255

Query: 248 SAAAMSSDEYKKRTILEGFLNRDRS 256
            + +M  +EYKK+ I+EGFL+R+R+
Sbjct: 256 HSQSMDLEEYKKKIIMEGFLDRNRN 277

[Close]

BLAST of CmoCh01G012300 vs. TrEMBL
Match: B9N563_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41940g PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.6e-07
Identity = 78/280 (27.86%), Postives = 122/280 (43.57%), Query Frame = 1


Query: 2   DSFAATKSKKKFFPCFRSTASSGPVRTVR----GMNAADEQVFPFMAVEERNGMMLHNVQ 61
           D     K+K KF  CFR     G  R       G     + V   + +E ++G +   + 
Sbjct: 14  DQNRKNKNKNKFLLCFRPVVMDGLERQGLEEGGGHYGGGDPVLKCVKLEIKDGEVFPQIF 73

Query: 62  PFD---GCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKK---------RKQKEN 121
           P +        +   +K G    +SR LKA+LF TSLAKK +K+K         + +KE+
Sbjct: 74  PTNLPSSSKESTAYPEKRGHKKNISRLLKAILFETSLAKKNKKRKLLQKLKQSEKVEKES 133

Query: 122 SNEENQRRRLLSSISSRSSDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFH 181
           + E+N        ++ +    N  NS+   S  S+ +SS+S  S S  S  + + S  F 
Sbjct: 134 NPEKNSVDSKNKELAKKDDGINISNSNMTGSSHSSLWSSSS-SSLSLNSRSLSDTSRSFR 193

Query: 182 PTASNRLFRQINLRKTSR--------CWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFY 241
             +S    +Q N++   +        C  ++LV L+ LVLW K+ A +CTS W+      
Sbjct: 194 SNSSEFKPKQDNMQGNGKGHTSTIGLC--LVLVSLMVLVLWGKVCAILCTSTWLFLVPRC 253

Query: 242 RREIGFRSPDDKASAAAMSSDEYKKRTILEGFLNRDRSAV 258
            +               + S EYKK  I+EG L R R+ V
Sbjct: 254 SKARINNLSQKILDYEGIDSKEYKKMIIMEGLLERSRNHV 290

[Close]

BLAST of CmoCh01G012300 vs. NCBI nr
Match: gi|778686333|ref|XP_011652374.1| (PREDICTED: uncharacterized protein LOC105435019 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 4.8e-60
Identity = 157/275 (57.09%), Postives = 187/275 (68.00%), Query Frame = 1


Query: 1   MDSFAATKSKKK--FFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60
           MD+ A  K KKK   FPCFRS AS G    VR  + + E VFPF+ V+E       NV+P
Sbjct: 1   MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGS-EDVFPFITVDE-------NVRP 60

Query: 61  FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKENSNEE-NQRRRLLS 120
             G    SG +KK G  GA SRALKAVLFGTSLAKKIRK+K K+ +NS +E NQR +  S
Sbjct: 61  LYGGDGDSGHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPS 120

Query: 121 SIS---SRSSDPN---FRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASNR 180
           SI    SR++  N   +RNSST SSRTSAPFSS+SFCSSSP S E+ EISFRF+P  SNR
Sbjct: 121 SIGNNRSRTASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNR 180

Query: 181 LFRQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKAS 240
           L RQINL+K    WFVL+V LL+LVLW K+GA +CTS+WILC   YRR +G +    K S
Sbjct: 181 LLRQINLKKIFSGWFVLVVCLLNLVLWGKLGAIMCTSVWILC--LYRRRMGLK----KGS 240

Query: 241 AAAMSSDEYKKRTI-LEGFLNRDRSAVRNSITHID 266
           A   SS EY KR I +EGFL RDRS+ +NS+  ID
Sbjct: 241 AVGTSSGEYSKRRIGMEGFLKRDRSSAQNSMLRID 261

[Close]

BLAST of CmoCh01G012300 vs. NCBI nr
Match: gi|700204733|gb|KGN59866.1| (hypothetical protein Csa_3G851180 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 105/187 (56.15%), Postives = 124/187 (66.31%), Query Frame = 1


Query: 1   MDSFAATKSKKK--FFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQP 60
           MD+ A  K KKK   FPCFRS AS G    VR  + + E VFPF+ V+E       NV+P
Sbjct: 1   MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGS-EDVFPFITVDE-------NVRP 60

Query: 61  FDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKENSNEE-NQRRRLLS 120
             G    SG +KK G  GA SRALKAVLFGTSLAKKIRK+K K+ +NS +E NQR +  S
Sbjct: 61  LYGGDGDSGHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPS 120

Query: 121 SIS---SRSSDPN---FRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASNR 179
           SI    SR++  N   +RNSST SSRTSAPFSS+SFCSSSP S E+ EISFRF+P  SNR
Sbjct: 121 SIGNNRSRTASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNR 179

[Close]

BLAST of CmoCh01G012300 vs. NCBI nr
Match: gi|702385103|ref|XP_010064443.1| (PREDICTED: uncharacterized protein LOC104451503 [Eucalyptus grandis])

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-10
Identity = 91/279 (32.62%), Postives = 129/279 (46.24%), Query Frame = 1


Query: 5   AATKSKKKFFPCFRSTASSGPVRTVRGM--NAADEQVFPFMAVEERNGMMLHNVQPFDGC 64
           A+  S +KFF CFR        +          DE  F  +A +E  G  L  V P  G 
Sbjct: 15  ASRSSSRKFFRCFRPAVLDDDYKGGDHWCEQGVDETFFAVVAAKENEGHALRKV-PSGGK 74

Query: 65  GNVS------GRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQ---KENSNEENQRR 124
           G+        G++KK  G  +L+RA +AVLF TSLAKK+RKKK  +   +  SN   +  
Sbjct: 75  GDDGSDDDDRGKKKKKKGLKSLARASRAVLFETSLAKKLRKKKSAENSLESISNLSMEAD 134

Query: 125 RLL--------SSISSRSSDPNFRNSSTCSSRTSAPFSSASFCSSSPTS------PEIKE 184
           R+L        S +S     P   +  + SS   +P  S+S  SS  +S         + 
Sbjct: 135 RILKLMHQNSSSGVSDNDKAPTTESDGSNSSGAVSPSLSSSRSSSMNSSMRGRSQSSTRS 194

Query: 185 ISFRFHPTASNRL----FRQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFH 244
            SF      S+ L     R  +    + C  +LL+ L +L+LW K+ A VCTS W+L   
Sbjct: 195 SSFNLKQIQSSALEDGKERPSHSENFTIC--LLLLTLPALILWGKVCAIVCTSTWLLLVP 254

Query: 245 FYRREIGFRSPDDKA--SAAAMSSDEYKKRTILEGFLNR 253
            +      +SP D A  S++ M S EYKK+ IL+G L R
Sbjct: 255 RWSTIKCAKSPYDIADESSSIMDSPEYKKKIILKGLLQR 290

[Close]

BLAST of CmoCh01G012300 vs. NCBI nr
Match: gi|223534939|gb|EEF36625.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08
Identity = 77/265 (29.06%), Postives = 124/265 (46.79%), Query Frame = 1


Query: 8   KSKKKFFPCFRSTASSGPVRTVRGMNAADEQVFPFMAVEERNGMMLHNVQPFDGCGNVSG 67
           K+  K F C R       +   +G  AA  QV   + +E ++G++  +V P         
Sbjct: 16  KTNNKLFLCLRPAVVEDFLANSKGGTAAS-QVLKLIDMERKDGVLFPSVYPSPEGDAAIA 75

Query: 68  RQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKEN-------SNEENQRRRLLSSIS 127
           RQ K      L RA+KAV F TSLAKKI+K+   +K+        SN +     +   + 
Sbjct: 76  RQNKKSKKKFL-RAVKAVFFETSLAKKIKKRTSTKKKKYSTGETISNVDKDLDLVKEKLL 135

Query: 128 SRSSDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRF------HPTASNRLFR 187
            +     F   +  S    +  +S+S CSS+P+    K    R       +P   N + +
Sbjct: 136 HQKLSKKFTGRNIVSYYAPS-VNSSSVCSSAPSLNNSKRFLERVISLGPSNPILENNIKK 195

Query: 188 QINLRK---TSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFR-SPDDKA 247
           Q N +    ++   F+LLV L  LVLW K+ A +CTS W+     +    G +   + + 
Sbjct: 196 QENGKGHYGSNTGLFLLLVTLTVLVLWGKVYAILCTSTWLFFVPNWSNVSGKKLLKNGRV 255

Query: 248 SAAAMSSDEYKKRTILEGFLNRDRS 256
            + +M  +EYKK+ I+EGFL+R+R+
Sbjct: 256 HSQSMDLEEYKKKIIMEGFLDRNRN 277

[Close]

BLAST of CmoCh01G012300 vs. NCBI nr
Match: gi|1000952544|ref|XP_002525789.2| (PREDICTED: uncharacterized protein LOC8282933 [Ricinus communis])

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 70/238 (29.41%), Postives = 114/238 (47.90%), Query Frame = 1


Query: 35  ADEQVFPFMAVEERNGMMLHNVQPFDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKK 94
           A  QV   + +E ++G++  +V P         RQ K      L RA+KAV F TSLAKK
Sbjct: 211 AASQVLKLIDMERKDGVLFPSVYPSPEGDAAIARQNKKSKKKFL-RAVKAVFFETSLAKK 270

Query: 95  IRKKKRKQKEN-------SNEENQRRRLLSSISSRSSDPNFRNSSTCSSRTSAPFSSASF 154
           I+K+   +K+        SN +     +   +  +     F   +  S    +  +S+S 
Sbjct: 271 IKKRTSTKKKKYSTGETISNVDKDLDLVKEKLLHQKLSKKFTGRNIVSYYAPS-VNSSSV 330

Query: 155 CSSSPTSPEIKEISFRF------HPTASNRLFRQINLRK---TSRCWFVLLVGLLSLVLW 214
           CSS+P+    K    R       +P   N + +Q N +    ++   F+LLV L  LVLW
Sbjct: 331 CSSAPSLNNSKRFLERVISLGPSNPILENNIKKQENGKGHYGSNTGLFLLLVTLTVLVLW 390

Query: 215 EKIGATVCTSIWILCFHFYRREIGFR-SPDDKASAAAMSSDEYKKRTILEGFLNRDRS 256
            K+ A +CTS W+     +    G +   + +  + +M  +EYKK+ I+EGFL+R+R+
Sbjct: 391 GKVYAILCTSTWLFFVPNWSNVSGKKLLKNGRVHSQSMDLEEYKKKIIMEGFLDRNRN 446

The following BLAST results are available for this feature:

BLAST of CmoCh01G012300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G012300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIJ9_CUCSA	7.8e-33	56.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851180 PE=4 SV=1	[more]
B9SIH0_RICCO	1.3e-08	29.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1256160 PE=4 SV=1	[more]
B9N563_POPTR	9.6e-07	27.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41940g PE=4 SV=1	[more]

BLAST of CmoCh01G012300 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh01G012300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778686333\|ref\|XP_011652374.1\|	4.8e-60	57.09	PREDICTED: uncharacterized protein LOC105435019 [Cucumis sativus]	[more]
gi\|700204733\|gb\|KGN59866.1\|	1.1e-32	56.15	hypothetical protein Csa_3G851180 [Cucumis sativus]	[more]
gi\|702385103\|ref\|XP_010064443.1\|	2.7e-10	32.62	PREDICTED: uncharacterized protein LOC104451503 [Eucalyptus grandis]	[more]
gi\|223534939\|gb\|EEF36625.1\|	1.9e-08	29.06	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000952544\|ref\|XP_002525789.2\|	1.1e-06	29.41	PREDICTED: uncharacterized protein LOC8282933 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G012300.1	CmoCh01G012300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 91..118 scor
None	No IPR available	PANTHER	PTHR34379	FAMILY NOT NAMED	coord: 77..264 score: 6.9
None	No IPR available	PANTHER	PTHR34379:SF2	SUBFAMILY NOT NAMED	coord: 77..264 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G012300	CmaCh09G009010	Cucurbita maxima (Rimu)	cmacmoB048
CmoCh01G012300	CmaCh01G011770	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G012300	Cla023433	Watermelon (97103) v1	cmowmB457
CmoCh01G012300	Csa3G851180	Cucumber (Chinese Long) v2	cmocuB435
CmoCh01G012300	MELO3C018181	Melon (DHL92) v3.5.1	cmomeB418
CmoCh01G012300	ClCG11G018580	Watermelon (Charleston Gray)	cmowcgB392
CmoCh01G012300	CSPI03G41860	Wild cucumber (PI 183967)	cmocpiB439
CmoCh01G012300	Lsi04G012740	Bottle gourd (USVL1VR-Ls)	cmolsiB414
CmoCh01G012300	Cp4.1LG02g01400	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G012300	Cp4.1LG06g07350	Cucurbita pepo (Zucchini)	cmocpeB464
CmoCh01G012300	MELO3C018181.2	Melon (DHL92) v3.6.1	cmomedB478
CmoCh01G012300	CsaV3_3G044290	Cucumber (Chinese Long) v3	cmocucB0526
CmoCh01G012300	Cla97C11G224690	Watermelon (97103) v2	cmowmbB436
CmoCh01G012300	Bhi09G001676	Wax gourd	cmowgoB0602
CmoCh01G012300	CsGy3G039270	Cucumber (Gy14) v2	cgybcmoB334
CmoCh01G012300	Carg05670	Silver-seed gourd	carcmoB1367
CmoCh01G012300	Carg12772	Silver-seed gourd	carcmoB1215

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G012300	CmoCh09G008910	Cucurbita moschata (Rifu)	cmocmoB018

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G012300	Cucumber (Gy14) v2	cgybcmoB101
CmoCh01G012300	Cucumber (Gy14) v2	cgybcmoB756
CmoCh01G012300	Melon (DHL92) v3.6.1	cmomedB441
CmoCh01G012300	Melon (DHL92) v3.6.1	cmomedB507
CmoCh01G012300	Silver-seed gourd	carcmoB0039
CmoCh01G012300	Cucumber (Chinese Long) v3	cmocucB0503
CmoCh01G012300	Cucumber (Chinese Long) v3	cmocucB0568
CmoCh01G012300	Watermelon (97103) v2	cmowmbB445
CmoCh01G012300	Watermelon (97103) v2	cmowmbB425
CmoCh01G012300	Cucurbita moschata (Rifu)	cmocmoB174
CmoCh01G012300	Cucurbita moschata (Rifu)	cmocmoB330
CmoCh01G012300	Cucurbita moschata (Rifu)	cmocmoB358
CmoCh01G012300	Cucurbita moschata (Rifu)	cmocmoB362
CmoCh01G012300	Cucumber (Gy14) v1	cgycmoB0333
CmoCh01G012300	Cucumber (Gy14) v1	cgycmoB0936
CmoCh01G012300	Cucurbita maxima (Rimu)	cmacmoB228
CmoCh01G012300	Cucurbita maxima (Rimu)	cmacmoB328
CmoCh01G012300	Wild cucumber (PI 183967)	cmocpiB423
CmoCh01G012300	Wild cucumber (PI 183967)	cmocpiB480
CmoCh01G012300	Cucumber (Chinese Long) v2	cmocuB419
CmoCh01G012300	Melon (DHL92) v3.5.1	cmomeB384
CmoCh01G012300	Watermelon (Charleston Gray)	cmowcgB400
CmoCh01G012300	Watermelon (97103) v1	cmowmB420
CmoCh01G012300	Cucurbita pepo (Zucchini)	cmocpeB428
CmoCh01G012300	Cucurbita pepo (Zucchini)	cmocpeB443
CmoCh01G012300	Bottle gourd (USVL1VR-Ls)	cmolsiB399