CmoCh01G011770 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G011770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Actin cytoskeleton-regulatory complex protein end3, putative isoform 1
Location	Cmo_Chr01 : 9589343 .. 9589870 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGGCGGTGAAAACGGCCTGAGAATGCAGAGCAGCGCTCTGTGGCGGTCTTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGAACGTTCTCGAGGAGAAATCGATAACGGCTTCAAATTCCTCCGATGATTTGAATTTCTTCGCCGATTCGTCCATTTCTGAATCCGTTTCCGCTTCCGGAATGATTCCGAGGTTGAACGGCAGAGGCAATGCTCGGATTGCTCCAAAATCGGCTCCTCGATCGATTCCGCGGTGGTTTAAACCTAACGGAAGTGAAACGCCATGGAAATTCGATTGCGACGACGGAGTTGCCGATGAGAGCGAGGAGGAGGAGGAGGAAGAGGAGGAAGGATTTGAGGAGAGAGTTCCGCCGCATGAATTGATTGCAAAAAGGTTAGTTAGGGCACAGATTTCGTCGTTCTCTGTGTTGGAAGGAGTCGGAAGAACATTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCTGTTCTTACCAAAACTGGATTTCTGGAATCACTGTGA

mRNA sequence

ATGTACGGCGGTGAAAACGGCCTGAGAATGCAGAGCAGCGCTCTGTGGCGGTCTTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGAACGTTCTCGAGGAGAAATCGATAACGGCTTCAAATTCCTCCGATGATTTGAATTTCTTCGCCGATTCGTCCATTTCTGAATCCGTTTCCGCTTCCGGAATGATTCCGAGGTTGAACGGCAGAGGCAATGCTCGGATTGCTCCAAAATCGGCTCCTCGATCGATTCCGCGGTGGTTTAAACCTAACGGAAGTGAAACGCCATGGAAATTCGATTGCGACGACGGAGTTGCCGATGAGAGCGAGGAGGAGGAGGAGGAAGAGGAGGAAGGATTTGAGGAGAGAGTTCCGCCGCATGAATTGATTGCAAAAAGGGCACAGATTTCGTCGTTCTCTGTGTTGGAAGGAGTCGGAAGAACATTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCTGTTCTTACCAAAACTGGATTTCTGGAATCACTGTGA

Coding sequence (CDS)

ATGTACGGCGGTGAAAACGGCCTGAGAATGCAGAGCAGCGCTCTGTGGCGGTCTTTCAGAAACGGCGATTTCGAAGAAGAAGACGTGTGGAACGTTCTCGAGGAGAAATCGATAACGGCTTCAAATTCCTCCGATGATTTGAATTTCTTCGCCGATTCGTCCATTTCTGAATCCGTTTCCGCTTCCGGAATGATTCCGAGGTTGAACGGCAGAGGCAATGCTCGGATTGCTCCAAAATCGGCTCCTCGATCGATTCCGCGGTGGTTTAAACCTAACGGAAGTGAAACGCCATGGAAATTCGATTGCGACGACGGAGTTGCCGATGAGAGCGAGGAGGAGGAGGAGGAAGAGGAGGAAGGATTTGAGGAGAGAGTTCCGCCGCATGAATTGATTGCAAAAAGGGCACAGATTTCGTCGTTCTCTGTGTTGGAAGGAGTCGGAAGAACATTGAAAGGGAGAGATCTGAGTAAAGTAAGGAATGCTGTTCTTACCAAAACTGGATTTCTGGAATCACTGTGA

Homology

[Close]

BLAST of CmoCh01G011770 vs. TrEMBL
Match: A0A0A0K3A6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G211080 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-39
Identity = 117/191 (61.26%), Postives = 127/191 (66.49%), Query Frame = 1


Query: 1   MYGGENGLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESV- 60
           M GG   L   ++ALWRSFRNGDFEEEDVWNVL EKS T S  S   +F  DSSI ES  
Sbjct: 1   MDGGRTAL---TTALWRSFRNGDFEEEDVWNVLNEKSKTTSYHS---SFPTDSSIMESPF 60

Query: 61  --SASGMIPRLNGRGNARIAPKSAPRSIPRWFKPNGSETP------W-KFDCDDGVAD-- 120
             SAS MIPR NG   A+I       SIP+W K    + P      W + D +DGV +  
Sbjct: 61  LPSASRMIPRPNGGVGAQIG------SIPQWSKTERRKNPRNRKVCWDEEDDEDGVVEGG 120

Query: 121 ----ESEEEEEEEEEGFEERVPPHELIAKR---AQISSFSVLEGVGRTLKGRDLSKVRNA 173
               E EEEEEEEEEG  +RVPPHELIAKR   AQISSFSV EG GRTLKGRDLSKVRNA
Sbjct: 121 GSEEEEEEEEEEEEEGIGKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDLSKVRNA 179

[Close]

BLAST of CmoCh01G011770 vs. TrEMBL
Match: V7B8Z8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G268000g PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26
Identity = 88/194 (45.36%), Postives = 117/194 (60.31%), Query Frame = 1


Query: 8   LRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESV------SA 67
           L  + S +W S R+GDF+EE++W+VL+ +S      S  +  F +   S SV      SA
Sbjct: 7   LGRKHSGIWNSLRDGDFDEEEIWDVLKNRS---DYGSSGVRKFKEKDQSSSVPVPARPSA 66

Query: 68  SGMIPRLNGRGN---------ARIAPKSAPRSIPRWFK------PNGSETPWKFDCD--- 127
           + M+PR +  G+         A++  +SAP  IP W K      P  S + +  DCD   
Sbjct: 67  ARMVPRSSNSGSNSSANSSNEAKVLQQSAPVKIPDWSKIYTSNPPKNSASRFDADCDGEG 126

Query: 128 DGVADESEEEEEEEEEGFE--ERVPPHELIAK---RAQISSFSVLEGVGRTLKGRDLSKV 173
           DGV + S + +E+ EE  E   ++PPHE IA+   R+QISSFSVLEG GRTLKGRDLSKV
Sbjct: 127 DGVGNYSGDSDEDGEENDEPDSKLPPHEFIARRLARSQISSFSVLEGAGRTLKGRDLSKV 186

[Close]

BLAST of CmoCh01G011770 vs. TrEMBL
Match: W9QJJ5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004514 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-26
Identity = 92/213 (43.19%), Postives = 119/213 (55.87%), Query Frame = 1


Query: 7   GLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDD------LNFFADSSISESVS 66
           GL  QSS +WRS R+GDFEEEDVW+VL+++  T  +SSD       L   + SS   S+S
Sbjct: 6   GLIRQSSGVWRSLRDGDFEEEDVWSVLKDR--TTDHSSDTTTKVVRLKESSSSSPPPSLS 65

Query: 67  -------ASGMIPRLNGRGN-------ARIAPKSAPRSIPRW--------FKPNGSETPW 126
                  AS +IP+  G          A++  +SAP + P W         K       W
Sbjct: 66  GPKNVPTASRIIPKAGGGSRSVNLNHEAKVLQQSAPINTPNWPNNIYRHKSKKASKNRSW 125

Query: 127 KFDCDDGVADESEEEEEEEEEG----------------FEERVPPHELIAKR---AQISS 173
             D DD   D+ +E+++E ++                 +  +VPPHELIA+R   +QISS
Sbjct: 126 LNDYDDDHHDDDDEDDDEHDDDDDDDDDDDYYYYNDDDYAHKVPPHELIARRLAKSQISS 185

[Close]

BLAST of CmoCh01G011770 vs. TrEMBL
Match: A0A0B2S2E9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_003937 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-26
Identity = 89/191 (46.60%), Postives = 122/191 (63.87%), Query Frame = 1


Query: 8   LRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESV----SASG 67
           L  Q S +W+S R+G+F+EE+VW+V + +S   S+SS  +  F D   S SV    S++ 
Sbjct: 7   LGRQHSGIWKSLRDGEFDEEEVWDVFKNRSDYGSSSSG-VRKFKDKGKSSSVPARPSSAR 66

Query: 68  MIPRLNGRGN---------ARIAPKSAPRSIPRWFKPNGSETPW----KFDCD---DGVA 127
           MIPR +   N         A++  +SAP +IP W K   ++TP     +FD D   DG A
Sbjct: 67  MIPRSSNSSNNSSASSSNEAKVLQQSAPVNIPDWSKIYRTKTPKNSVSRFDDDYDGDGAA 126

Query: 128 D---ESEEEEEEEEEGFEERVPPHELIAK---RAQISSFSVLEGVGRTLKGRDLSKVRNA 173
           +   +S+E+ EE +E  + ++PPHE IA+   R++ISSFSVLEG GRTLKGRDLSKVRN 
Sbjct: 127 NYGGDSDEDGEENDES-DSKLPPHEFIARRLARSRISSFSVLEGAGRTLKGRDLSKVRND 186

[Close]

BLAST of CmoCh01G011770 vs. TrEMBL
Match: C6TKI1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G291700 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-26
Identity = 89/191 (46.60%), Postives = 122/191 (63.87%), Query Frame = 1


Query: 8   LRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESV----SASG 67
           L  Q S +W+S R+G+F+EE+VW+V + +S   S+SS  +  F D   S SV    S++ 
Sbjct: 7   LGRQHSGIWKSLRDGEFDEEEVWDVFKNRSDYGSSSSG-VRKFKDKGKSSSVPARPSSAR 66

Query: 68  MIPRLNGRGN---------ARIAPKSAPRSIPRWFKPNGSETPW----KFDCD---DGVA 127
           MIPR +   N         A++  +SAP +IP W K   ++TP     +FD D   DG A
Sbjct: 67  MIPRSSNSSNNSSASSSNEAKVLQQSAPVNIPDWSKIYRTKTPKNSVSRFDDDYDGDGAA 126

Query: 128 D---ESEEEEEEEEEGFEERVPPHELIAK---RAQISSFSVLEGVGRTLKGRDLSKVRNA 173
           +   +S+E+ EE +E  + ++PPHE IA+   R++ISSFSVLEG GRTLKGRDLSKVRN 
Sbjct: 127 NYGGDSDEDGEENDES-DSKLPPHEFIARRLARSRISSFSVLEGAGRTLKGRDLSKVRND 186

[Close]

BLAST of CmoCh01G011770 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19
Identity = 73/163 (44.79%), Postives = 87/163 (53.37%), Query Frame = 1


Query: 23  DFEEEDVWNVLEEKSITASNS--SDDLNFFADSSISESVSASGMIPRLNG-RGNARIAPK 82
           +F+EE+VW+VL E          S   N F+ SS S    ++  IP+ N   G A+    
Sbjct: 6   EFQEEEVWSVLRESETQGPEMKMSKSNNLFSASSSS----SARYIPKGNEVSGGAK--QS 65

Query: 83  SAPRSIPRWFKPNGSETP--------WKFDCDDGVADESEEEEEEEEEGFEERVPPHELI 142
           SAP +IP W K  G            W  D DD              EG    VPPHEL+
Sbjct: 66  SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDD--------------EG--SMVPPHELV 125

Query: 143 AKR---AQISSFSVLEGVGRTLKGRDLSKVRNAVLTKTGFLES 172
           AKR    QISSFS+ EG+GRTLKGRDLSK RNAVLT+TGFLES
Sbjct: 126 AKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLES 146

[Close]

BLAST of CmoCh01G011770 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 91.3 bits (225), Expect = 6.4e-19
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1


Query: 23  DFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESVSASGMIPRLNGRGNARIAPKSAP 82
           +F+EEDVW+VL E   ++       + F  SS S S S+   I R   +  + +   SAP
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHF--SSSSSSSSSPWNIRR--SKEVSGVKQSSAP 85

Query: 83  RSIPRWFKPNGSETPWKFDCDDGVADESEEEEEEEEEGFEERVPPHELIAK---RAQISS 142
            ++P W K  G     +      +   + ++++E+++G    VPPHE +A+   R QISS
Sbjct: 86  MNVPDWSKVYGDSKSNRRSSH--LHSHAADDDDEDDDGC--MVPPHEWVARKLARTQISS 145

Query: 143 FSVLEGVGRTLKGRDLSKVRNAVLTKTGFLE 171
           FS+ EGVGRTLKGRDLSKVRNAVL+KTGFLE
Sbjct: 146 FSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of CmoCh01G011770 vs. TAIR10
Match: AT4G26950.1 (AT4G26950.1 Protein of unknown function, DUF584)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 1


Query: 21  NGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESVSASGMIP-RLNGRGNARIAPK 80
           +GDF+E+DVW+VL+        SS+     + S+ +   S   MIP R    G A +  +
Sbjct: 13  DGDFQEDDVWDVLDGYQSPFMISSNHTTKPSFSTQTLLPSEPRMIPERQRTEGMAPMRQQ 72

Query: 81  SAPRSIPRWFKPNGSETPWKFDCDDGVADESEEEEEEEEEGFEERVPPHELIAKRAQISS 140
           S P ++P W      +T    D                    +E V P E   +R++ SS
Sbjct: 73  SVPVNVPDWSMVQRKKTKKVVD--------------------DENVSPEEYFLRRSRSSS 132

Query: 141 FS-VLEGVGRTLKGRDLSKVRNAVLTKTGFLE 171
            S V+EGVGR LKGRDLSKVRNA+L +TGFLE
Sbjct: 133 SSSVMEGVGRKLKGRDLSKVRNAILKQTGFLE 144

[Close]

BLAST of CmoCh01G011770 vs. TAIR10
Match: AT3G15040.1 (AT3G15040.1 Protein of unknown function, DUF584)

HSP 1 Score: 67.8 bits (164), Expect = 7.5e-12
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1


Query: 78  PKSAPRSIPRWFKPNGSETPWKFDCDDGVADESEEEEEEEEEGFEERVPPHELIAK---R 137
           P+SAP  +P       +    +F   D V D+     EEEEEG  E +PPHE++A+   +
Sbjct: 155 PQSAPVQVPLVSSAMMNRHKKEFKLTDVVDDD-----EEEEEG--EMLPPHEIVARSLAQ 214

Query: 138 AQISSFSVLEGVGRTLKGRDLSKVRNAVLTKTGFLE 171
           + + S SVLEG GRTLKGRDL +VRNAV  +TGF++
Sbjct: 215 SSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFID 243

[Close]

BLAST of CmoCh01G011770 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 1


Query: 23  DFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESVSASGMIPRLNGRGNARIAPKSAP 82
           +F+E D++N +          SD  +F     IS SV +           ++  A  S P
Sbjct: 32  EFDESDLFNPIH---------SDSPDFCR--KISSSVRSGKKSSNRPSAASSAAAASSLP 91

Query: 83  RSIPRWFKPNGSETPWKFDCDDGVADESEEEEEEEEEGFEERVPPHELIAKRAQISSFSV 142
            ++P W K    E  ++ +    + D  +++++ E+ G  + +PPHE +AK  +++SFSV
Sbjct: 92  VNVPDWSKILRGE--YRDNRRRSIEDNDDDDDDNEDGG--DWLPPHEFLAK-TRMASFSV 151

Query: 143 LEGVGRTLKGRDLSKVRNAVLTKTGF 169
            EGVGRTLKGRDLS+VRNA+  K GF
Sbjct: 152 HEGVGRTLKGRDLSRVRNAIFEKFGF 161

[Close]

BLAST of CmoCh01G011770 vs. NCBI nr
Match: gi|778725666|ref|XP_011658978.1| (PREDICTED: uncharacterized protein LOC105436118 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 5.2e-39
Identity = 117/191 (61.26%), Postives = 127/191 (66.49%), Query Frame = 1


Query: 1   MYGGENGLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESV- 60
           M GG   L   ++ALWRSFRNGDFEEEDVWNVL EKS T S  S   +F  DSSI ES  
Sbjct: 1   MDGGRTAL---TTALWRSFRNGDFEEEDVWNVLNEKSKTTSYHS---SFPTDSSIMESPF 60

Query: 61  --SASGMIPRLNGRGNARIAPKSAPRSIPRWFKPNGSETP------W-KFDCDDGVAD-- 120
             SAS MIPR NG   A+I       SIP+W K    + P      W + D +DGV +  
Sbjct: 61  LPSASRMIPRPNGGVGAQIG------SIPQWSKTERRKNPRNRKVCWDEEDDEDGVVEGG 120

Query: 121 ----ESEEEEEEEEEGFEERVPPHELIAKR---AQISSFSVLEGVGRTLKGRDLSKVRNA 173
               E EEEEEEEEEG  +RVPPHELIAKR   AQISSFSV EG GRTLKGRDLSKVRNA
Sbjct: 121 GSEEEEEEEEEEEEEGIGKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDLSKVRNA 179

[Close]

BLAST of CmoCh01G011770 vs. NCBI nr
Match: gi|659093817|ref|XP_008447734.1| (PREDICTED: casein kinase II subunit beta-2-like [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-34
Identity = 102/184 (55.43%), Postives = 120/184 (65.22%), Query Frame = 1


Query: 12  SSALWRSFRNGDFEEEDVWNVLEE-KSITASNSSDDLNFFADSSISESVSASGMIPRLNG 71
           ++ALWRSFRNGDFEE+DVWNVL + +S T S ++   + F+ +  S   SAS MIPR NG
Sbjct: 9   TTALWRSFRNGDFEEQDVWNVLNDHESTTTSTTTSYHSNFSTADSSFLPSASRMIPRPNG 68

Query: 72  RGNARIAPKSAPRSIPRWFKPNGSETP--------W-KFDCDDGVA----------DESE 131
               +I        IP+W K   S+ P        W + D +DGV           +E E
Sbjct: 69  GVGGQIG------LIPQWLKSERSKNPRNRIRKVCWDEEDDEDGVEGGGHSKEEEEEEEE 128

Query: 132 EEEEEEEEGFEERVPPHELIAKR---AQISSFSVLEGVGRTLKGRDLSKVRNAVLTKTGF 173
           EEEEEE EG E+RVPPHELIAKR   AQISSFSV EG GRTLKGRDLSKVRNAVLTKTGF
Sbjct: 129 EEEEEEGEGIEKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDLSKVRNAVLTKTGF 186

[Close]

BLAST of CmoCh01G011770 vs. NCBI nr
Match: gi|764559483|ref|XP_011461039.1| (PREDICTED: nucleolin [Fragaria vesca subsp. vesca])

HSP 1 Score: 138.7 bits (348), Expect = 9.9e-30
Identity = 94/203 (46.31%), Postives = 118/203 (58.13%), Query Frame = 1


Query: 4   GENGLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSIS---ESVS 63
           G+  L  Q S +WRSFR GDFEEEDVW+V+ +++    NSS       +SS+S      +
Sbjct: 2   GDRYLSRQGSGVWRSFRYGDFEEEDVWDVIRDRN----NSSTMPVRSKESSVSVPRRLPT 61

Query: 64  ASGMIPRL--------------NGRGNARIAPKSAPRSIPRWFKPNGSET-------PWK 123
           AS MIPR               N    A+I  +SAP  IP W K NG ++        W 
Sbjct: 62  ASRMIPRASSHNYGSGSSYSSSNNTHEAKIVQQSAPVHIPSWSKANGQKSNKGSHNSSWH 121

Query: 124 FDCDDGVADE-------SEEEEEEEEEGFEERVPPHELIAKR---AQISSFSVLEGVGRT 173
            +CDD   D+        +E+EEEE + +  + PPHE +A+R   +QISSFSV EG GRT
Sbjct: 122 NECDDSDDDDIDEDGDHDDEDEEEEADDYNAKEPPHEFLARRLARSQISSFSVFEGAGRT 181

[Close]

BLAST of CmoCh01G011770 vs. NCBI nr
Match: gi|645241036|ref|XP_008226886.1| (PREDICTED: uncharacterized protein LOC103326446 isoform X1 [Prunus mume])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 86/195 (44.10%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 7   GLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESVSASGMIP 66
           GL  Q S +WR+ R+GDFEEEDVW VL++++I+++         + S      +AS MIP
Sbjct: 33  GLTRQCSGVWRALRDGDFEEEDVWEVLKDRNISSNKMVGRSKESSVSVPRHLPTASRMIP 92

Query: 67  RLN----GRGN-----------ARIAPKSAPRSIPRWFKPNGSETP-------WKFDCDD 126
           + +    G G+           A+I  +SAP +IP W +  G ++        W+ D  D
Sbjct: 93  KASSHKYGSGSSCSSSNTITHEAKIVQQSAPVNIPDWSEVYGQKSKKAPKNVSWQNDDAD 152

Query: 127 GVA----DESEEEEEEEEEGFEERVPPHELIAK---RAQISSFSVLEGVGRTLKGRDLSK 173
                  D+ + ++++EEE ++ +VPPHE IA+   R+QISSFSV+EG GRTLKGRDLSK
Sbjct: 153 DEEEVGDDDGDSDDDDEEEDYDSKVPPHEFIARRLARSQISSFSVVEGAGRTLKGRDLSK 212

[Close]

BLAST of CmoCh01G011770 vs. NCBI nr
Match: gi|645241038|ref|XP_008226887.1| (PREDICTED: uncharacterized protein LOC103326446 isoform X2 [Prunus mume])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 86/195 (44.10%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 7   GLRMQSSALWRSFRNGDFEEEDVWNVLEEKSITASNSSDDLNFFADSSISESVSASGMIP 66
           GL  Q S +WR+ R+GDFEEEDVW VL++++I+++         + S      +AS MIP
Sbjct: 6   GLTRQCSGVWRALRDGDFEEEDVWEVLKDRNISSNKMVGRSKESSVSVPRHLPTASRMIP 65

Query: 67  RLN----GRGN-----------ARIAPKSAPRSIPRWFKPNGSETP-------WKFDCDD 126
           + +    G G+           A+I  +SAP +IP W +  G ++        W+ D  D
Sbjct: 66  KASSHKYGSGSSCSSSNTITHEAKIVQQSAPVNIPDWSEVYGQKSKKAPKNVSWQNDDAD 125

Query: 127 GVA----DESEEEEEEEEEGFEERVPPHELIAK---RAQISSFSVLEGVGRTLKGRDLSK 173
                  D+ + ++++EEE ++ +VPPHE IA+   R+QISSFSV+EG GRTLKGRDLSK
Sbjct: 126 DEEEVGDDDGDSDDDDEEEDYDSKVPPHEFIARRLARSQISSFSVVEGAGRTLKGRDLSK 185

The following BLAST results are available for this feature:

BLAST of CmoCh01G011770 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G011770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3A6_CUCSA	3.6e-39	61.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G211080 PE=4 SV=1	[more]
V7B8Z8_PHAVU	1.2e-26	45.36	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G268000g PE=4 SV=1	[more]
W9QJJ5_9ROSA	1.6e-26	43.19	Uncharacterized protein OS=Morus notabilis GN=L484_004514 PE=4 SV=1	[more]
A0A0B2S2E9_GLYSO	4.6e-26	46.60	Uncharacterized protein OS=Glycine soja GN=glysoja_003937 PE=4 SV=1	[more]
C6TKI1_SOYBN	4.6e-26	46.60	Uncharacterized protein OS=Glycine max GN=GLYMA_02G291700 PE=2 SV=1	[more]

BLAST of CmoCh01G011770 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21970.1	2.2e-19	44.79	Protein of unknown function, DUF584	[more]
AT4G04630.1	6.4e-19	43.05	Protein of unknown function, DUF584	[more]
AT4G26950.1	1.4e-13	37.50	Protein of unknown function, DUF584	[more]
AT3G15040.1	7.5e-12	45.83	Protein of unknown function, DUF584	[more]
AT5G60680.1	2.2e-11	34.93	Protein of unknown function, DUF584	[more]

BLAST of CmoCh01G011770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778725666\|ref\|XP_011658978.1\|	5.2e-39	61.26	PREDICTED: uncharacterized protein LOC105436118 [Cucumis sativus]	[more]
gi\|659093817\|ref\|XP_008447734.1\|	2.3e-34	55.43	PREDICTED: casein kinase II subunit beta-2-like [Cucumis melo]	[more]
gi\|764559483\|ref\|XP_011461039.1\|	9.9e-30	46.31	PREDICTED: nucleolin [Fragaria vesca subsp. vesca]	[more]
gi\|645241036\|ref\|XP_008226886.1\|	1.6e-27	44.10	PREDICTED: uncharacterized protein LOC103326446 isoform X1 [Prunus mume]	[more]
gi\|645241038\|ref\|XP_008226887.1\|	1.6e-27	44.10	PREDICTED: uncharacterized protein LOC103326446 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G011770.1	CmoCh01G011770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 23..170 score: 5.9
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 7..171 score: 3.0
None	No IPR available	PANTHER	PTHR33083:SF4	SUBFAMILY NOT NAMED	coord: 7..171 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G011770	CmaCh01G011260	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G011770	Cla016322	Watermelon (97103) v1	cmowmB406
CmoCh01G011770	Csa7G211080	Cucumber (Chinese Long) v2	cmocuB487
CmoCh01G011770	MELO3C013159	Melon (DHL92) v3.5.1	cmomeB386
CmoCh01G011770	ClCG09G010840	Watermelon (Charleston Gray)	cmowcgB380
CmoCh01G011770	CSPI07G09850	Wild cucumber (PI 183967)	cmocpiB494
CmoCh01G011770	CSPI06G33560	Wild cucumber (PI 183967)	cmocpiB480
CmoCh01G011770	Lsi02G019000	Bottle gourd (USVL1VR-Ls)	cmolsiB395
CmoCh01G011770	Cp4.1LG02g00920	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G011770	Cp4.1LG06g08900	Cucurbita pepo (Zucchini)	cmocpeB464
CmoCh01G011770	Cp4.1LG20g03660	Cucurbita pepo (Zucchini)	cmocpeB443
CmoCh01G011770	MELO3C007391.2	Melon (DHL92) v3.6.1	cmomedB507
CmoCh01G011770	MELO3C002454.2	Melon (DHL92) v3.6.1	cmomedB441
CmoCh01G011770	MELO3C013159.2	Melon (DHL92) v3.6.1	cmomedB443
CmoCh01G011770	CsaV3_7G021860	Cucumber (Chinese Long) v3	cmocucB0584
CmoCh01G011770	CsaV3_6G049040	Cucumber (Chinese Long) v3	cmocucB0568
CmoCh01G011770	Cla97C03G055850	Watermelon (97103) v2	cmowmbB445
CmoCh01G011770	Cla97C09G173580	Watermelon (97103) v2	cmowmbB499
CmoCh01G011770	Bhi09G001383	Wax gourd	cmowgoB0616
CmoCh01G011770	Bhi03G000443	Wax gourd	cmowgoB0582
CmoCh01G011770	CsGy7G009330	Cucumber (Gy14) v2	cgybcmoB922
CmoCh01G011770	Carg12825	Silver-seed gourd	carcmoB1215

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G011770	CmoCh09G009540	Cucurbita moschata (Rifu)	cmocmoB018
CmoCh01G011770	CmoCh18G002710	Cucurbita moschata (Rifu)	cmocmoB330
CmoCh01G011770	CmoCh03G005600	Cucurbita moschata (Rifu)	cmocmoB362

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G011770	Cucurbita pepo (Zucchini)	cmocpeB428
CmoCh01G011770	Cucumber (Gy14) v2	cgybcmoB197
CmoCh01G011770	Silver-seed gourd	carcmoB0039
CmoCh01G011770	Cucumber (Chinese Long) v3	cmocucB0517
CmoCh01G011770	Cucurbita moschata (Rifu)	cmocmoB358
CmoCh01G011770	Cucumber (Gy14) v1	cgycmoB0242
CmoCh01G011770	Cucurbita maxima (Rimu)	cmacmoB048