CmaCh20G006680 (gene) Cucurbita maxima (Rimu)

NameCmaCh20G006680
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionThymidine kinase
LocationCma_Chr20 : 3065009 .. 3066305 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGCGCCTCCGATTTCGATTCAAATTCTGTCCTATTTGCTTTTTCGTCTCCAATCTGCTCCATGGAGTCCTTGAGGAATTCATTTTCCACCGATGGTGGTGCCGTCAGTGCAGGATCTCCACACCGCGTCGCAGGCGAAGTCCATGTGATCATCGGTCCTATGTTTGCCGGAAAAACCACCGCTCTACTCCGTCGGATCAAAGCTGAGAGCAGCAGTGGCAGGTAAACATAAAGTCTATTCTTACGGCCTGCAAACAGATCGAAAACCTTGAGTAAAATCTCAACTTGGAATTCCATGAACTCTCGTATCTGCTCTGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTGTCGATTCGGTAGTAACACACGATGGGGCCAAATTTCCATGCTGGGCACTGCCAGATCTTTCGTCTTTCCGACAGAAATTTGGAGAAGATGCTTATAACAAGGTATCTTCTTTGAAGAATCATTCTTTTTCATTACTATTTGTTTGGCAAATCTTATTTATCTAAACCCCCAATAATACCGGCAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTCGATGATCTCTATGATTTTTGCTGCGATGTTGCTGATAAAGATGGCAAAATCATTATCGTTGCTGGCTTAGATGGAGATTACCTCAGGTCCCATTCAAATCTCTCTCTGTCTTTCTCTGTACATATGACAATTCTGCATTAACATAATTTCTTGCATCTGAGCTGTTGGGTAACTTGAAAATTGTGCCACCCAGATGCGAAATCAGGGATCTTTCTAATACTAAAGTGGTTATTCTTCCATGGTTTTGGCAGGAGGAGATTTGGTTCAGTGCTTGATGTAGTACCTCTGGCTGACACAGTAACTAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCCTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCATCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATATTCTGGGATCTCGTGCTCTGAGAACAGGCTCTAATCTAGAGGCACTTCCTTCACTCATCTAAAATCTGCAACTTATCTTAATTTTTTAGACAAACTGCTTTGCTTTCGCCTGTGTATTTCCATATGTTTCCATCAAACAGCTGTCGCTAGCTACATGCTGAAATGAAACCCCTTTTTCTTGTTTGTGGAAAAAGGGTTTGTAACCTCATTCGTCCAATATTAAATACTAACATATTTCTCTTCTGG

mRNA sequence

ATTGCGCCTCCGATTTCGATTCAAATTCTGTCCTATTTGCTTTTTCGTCTCCAATCTGCTCCATGGAGTCCTTGAGGAATTCATTTTCCACCGATGGTGGTGCCGTCAGTGCAGGATCTCCACACCGCGTCGCAGGCGAAGTCCATGTGATCATCGGTCCTATGTTTGCCGGAAAAACCACCGCTCTACTCCGTCGGATCAAAGCTGAGAGCAGCAGTGGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTGTCGATTCGGTAGTAACACACGATGGGGCCAAATTTCCATGCTGGGCACTGCCAGATCTTTCGTCTTTCCGACAGAAATTTGGAGAAGATGCTTATAACAAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTCGATGATCTCTATGATTTTTGCTGCGATGTTGCTGATAAAGATGGCAAAATCATTATCGTTGCTGGCTTAGATGGAGATTACCTCAGGAGGAGATTTGGTTCAGTGCTTGATGTAGTACCTCTGGCTGACACAGTAACTAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCCTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCATCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATATTCTGGGATCTCGTGCTCTGAGAACAGGCTCTAATCTAGAGGCACTTCCTTCACTCATCTAAAATCTGCAACTTATCTTAATTTTTTAGACAAACTGCTTTGCTTTCGCCTGTGTATTTCCATATGTTTCCATCAAACAGCTGTCGCTAGCTACATGCTGAAATGAAACCCCTTTTTCTTGTTTGTGGAAAAAGGGTTTGTAACCTCATTCGTCCAATATTAAATACTAACATATTTCTCTTCTGG

Coding sequence (CDS)

ATGGAGTCCTTGAGGAATTCATTTTCCACCGATGGTGGTGCCGTCAGTGCAGGATCTCCACACCGCGTCGCAGGCGAAGTCCATGTGATCATCGGTCCTATGTTTGCCGGAAAAACCACCGCTCTACTCCGTCGGATCAAAGCTGAGAGCAGCAGTGGCAGGAATGTGGTGATGATCAAGTCAAGCAAGGACACAAGGTACGCTGTCGATTCGGTAGTAACACACGATGGGGCCAAATTTCCATGCTGGGCACTGCCAGATCTTTCGTCTTTCCGACAGAAATTTGGAGAAGATGCTTATAACAAGCTGGATGTGATTGGTGTTGATGAAGCTCAATTTTTCGATGATCTCTATGATTTTTGCTGCGATGTTGCTGATAAAGATGGCAAAATCATTATCGTTGCTGGCTTAGATGGAGATTACCTCAGGAGGAGATTTGGTTCAGTGCTTGATGTAGTACCTCTGGCTGACACAGTAACTAAGTTGACAGCTAGATGTGAACTTTGTGGTAAAAGAGCCTTCTTTACCTTGAGAAAGACAGAGGAGACAAGGACCGAGCTTATCGCTGGGGCTGATGTCTATATGCCGGTGTGCCGCCATCACTATGCCAATGGACAAGAAGTCATACAATCTTCCAAGAATATTCTGGGATCTCGTGCTCTGAGAACAGGCTCTAATCTAGAGGCACTTCCTTCACTCATCTAA

Protein sequence

MESLRNSFSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI
BLAST of CmaCh20G006680 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2)

HSP 1 Score: 312.4 bits (799), Expect = 4.2e-84
Identity = 144/209 (68.90%), Postives = 176/209 (84.21%), Query Frame = 1

Query: 9   STDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSG-RNVVMIKSSKDTRY 68
           S  GG  +  +     GE+HVI+GPMFAGKTTALLRR++ E+ +G RNV +IKS KD RY
Sbjct: 51  SRGGGGSAMEAQPSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRY 110

Query: 69  AVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADK 128
            +DSVVTHDG K PCWALP+LSSF+ K G +AY+K+DVIG+DEAQFFDDL+DFCC  AD+
Sbjct: 111 GLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADR 170

Query: 129 DGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTEL 188
           DGKI++VAGLDGDY R +FGSVLD++PLAD+VTKLTARCELCG+RAFFTLRKT ET+TEL
Sbjct: 171 DGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTEL 230

Query: 189 IAGADVYMPVCRHHYANGQEVIQSSKNIL 217
           I GADVYMPVCR HY +GQ VI++++ +L
Sbjct: 231 IGGADVYMPVCRQHYLDGQIVIEATRIVL 259

BLAST of CmaCh20G006680 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83
Identity = 146/195 (74.87%), Postives = 169/195 (86.67%), Query Frame = 1

Query: 22  RVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAKFP 81
           R +G VHVI+GPMF+GK+T+LLRRIK+E S GR+V M+KSSKDTRYA DSVVTHDG  FP
Sbjct: 28  RGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFP 87

Query: 82  CWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDGDY 141
           CWALPDL SF +KFG DAYNKLDVIG+DEAQFF DLY+FCC VAD DGKI+IVAGLDGDY
Sbjct: 88  CWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDY 147

Query: 142 LRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHH 201
           LRR FG+VLD++P+AD+VTKLTARCE+CG +AFFTLRK  +TRTELI GADVYMPVCR H
Sbjct: 148 LRRSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKH 207

Query: 202 YANGQEVIQSSKNIL 217
           Y     VI++SK +L
Sbjct: 208 YITNHIVIKASKKVL 222

BLAST of CmaCh20G006680 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.3e-80
Identity = 137/218 (62.84%), Postives = 180/218 (82.57%), Query Frame = 1

Query: 2   ESLRNSFSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKS 61
           ++ R + S+    +S+ SP    GE+HV++GPMF+GKTT LLRRI AE  +G+ + +IKS
Sbjct: 58  KATRVTSSSSSQPLSSSSP----GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKS 117

Query: 62  SKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAY-NKLDVIGVDEAQFFDDLYDF 121
           +KDTRY  +S+VTHDG K+PCW+LPDLSSF+++FG D Y N+LDVIG+DEAQFF DLY+F
Sbjct: 118 NKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEF 177

Query: 122 CCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKT 181
           C + ADK+GK +IVAGLDGD++RRRFGSVLD++P+ADTVTKLT+RCE+CGKRA FT+RKT
Sbjct: 178 CREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKT 237

Query: 182 EETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGS 219
           EE  TELI GA+VYMPVCR HY  GQ V+++++ +L S
Sbjct: 238 EEKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

BLAST of CmaCh20G006680 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 75/178 (42.13%), Postives = 113/178 (63.48%), Query Frame = 1

Query: 25  GEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAKFPCWA 84
           G +H+I+GPMF+GK+T L+R +     +  N  +IK SKD RY  D+V THD       +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 85  LPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDGDYLRR 144
              L   +     D  + +D++G+DE QFF+D+ +FC  +A+K GKI+IVA LDG Y R+
Sbjct: 64  TDSLFDIK-----DTLDDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 123

Query: 145 RFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHHY 203
            FG++L+++PL++ VTKL A C +C + A F+ R ++E   ELI G + Y+ VCR  Y
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCY 175

BLAST of CmaCh20G006680 vs. Swiss-Prot
Match: KITH_DICDI (Thymidine kinase 1 OS=Dictyostelium discoideum GN=thyB PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 87/199 (43.72%), Postives = 120/199 (60.30%), Query Frame = 1

Query: 22  RVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYA--VDS--VVTHDG 81
           ++AG++ VI GPMF+GKTT L+RRIK  + + +  ++IK SKDTRY   +D   +VTHD 
Sbjct: 5   QIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDK 64

Query: 82  AK---FPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIV 141
                FPC  L D+    Q +        DVIG+DE QFF D+  F  D+A++ GK +I+
Sbjct: 65  QNYQAFPCSILEDVKEQAQNY--------DVIGIDEGQFFPDVVQFSEDLANQ-GKTVII 124

Query: 142 AGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVY 201
           A LDG + R+ F SV+D+V  A+ +TKLTA C +C   A F+ R  E    ELI G D Y
Sbjct: 125 AALDGTFQRKPFQSVIDLVSKAEYITKLTAVCMVCYNEAAFSKRIVESDDIELIGGIDKY 184

Query: 202 MPVCRHHYANGQEVIQSSK 214
           + VCR  Y + Q    S+K
Sbjct: 185 ISVCRGCYNSDQNEGNSTK 194

BLAST of CmaCh20G006680 vs. TrEMBL
Match: A0A0A0KAS7_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_6G110310 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.5e-107
Identity = 199/233 (85.41%), Postives = 211/233 (90.56%), Query Frame = 1

Query: 1   MESLRNSF---STDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60
           MES R S    S+    V   S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESCRTSLPFTSSYADTVRPESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALPDLSSFRQKFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEAL 231
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKN +GSR +   SNLEAL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYAIGQEVIQSSKNAMGSRTI--ASNLEAL 231

BLAST of CmaCh20G006680 vs. TrEMBL
Match: F6HHL3_VITVI (Thymidine kinase OS=Vitis vinifera GN=VIT_12s0057g00500 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 9.2e-94
Identity = 167/213 (78.40%), Postives = 188/213 (88.26%), Query Frame = 1

Query: 7   SFSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTR 66
           S ++ GG    GS HR  GEVHVI+GPMFAGKTTALLRRIK+ES++GRNV MIKSSKDTR
Sbjct: 9   SLTSTGGV---GSIHRALGEVHVIVGPMFAGKTTALLRRIKSESNNGRNVAMIKSSKDTR 68

Query: 67  YAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVAD 126
           YA DS+VTHDG KFPCWALPDLSSFRQKFG +AY KL+VIG+DEAQFF+DLYDFCC+VAD
Sbjct: 69  YATDSIVTHDGVKFPCWALPDLSSFRQKFGAEAYEKLEVIGIDEAQFFEDLYDFCCEVAD 128

Query: 127 KDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTE 186
            DGK +IVAGLDGDYLRR FGSVLDV+PLAD+VTKLTARCELCGKRAFFTLRK EE +TE
Sbjct: 129 HDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTLRKIEEMQTE 188

Query: 187 LIAGADVYMPVCRHHYANGQEVIQSSKNILGSR 220
           LI GAD+YMPVCR HY NGQ VI++++N L SR
Sbjct: 189 LIGGADIYMPVCRQHYVNGQAVIEAARNALESR 218

BLAST of CmaCh20G006680 vs. TrEMBL
Match: A0A0H3WBS8_9ROSA (Thymidine kinase OS=Rubus deliciosus GN=TK1 PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.0e-93
Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 1

Query: 20  PHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAK 79
           P   +GEVHVI+GPMFAGKTTALLRRIK+E ++GRNV MIKSSKD RYAVDSVVTHDGAK
Sbjct: 6   PSIPSGEVHVIMGPMFAGKTTALLRRIKSEGANGRNVAMIKSSKDNRYAVDSVVTHDGAK 65

Query: 80  FPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDG 139
           FPCWALPDLSSFRQ FG DAY+KLDVIG+DEAQFF+DLYDFCC  AD DGK +IVAGLDG
Sbjct: 66  FPCWALPDLSSFRQNFGGDAYDKLDVIGIDEAQFFEDLYDFCCTAADHDGKTVIVAGLDG 125

Query: 140 DYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCR 199
           DYLRR FGSVLDVVPLADTVTKLTARCE+CGKRAFFTLRKTEET+TELI GADVYMPVCR
Sbjct: 126 DYLRRSFGSVLDVVPLADTVTKLTARCEMCGKRAFFTLRKTEETKTELIGGADVYMPVCR 185

Query: 200 HHYANGQEVIQSSKNILGSRALRTGSNLEALP 232
            HY NGQ +I+++++++ S   ++G+  EA P
Sbjct: 186 QHYVNGQVLIKAARSVVESHKSKSGTFSEAAP 217

BLAST of CmaCh20G006680 vs. TrEMBL
Match: V4W4L4_9ROSI (Thymidine kinase OS=Citrus clementina GN=CICLE_v10016471mg PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93
Identity = 163/224 (72.77%), Postives = 193/224 (86.16%), Query Frame = 1

Query: 11  DGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVD 70
           + G    G PHR +GE+HVI+GPMFAGKTTALLRRI++ES +GRN+ MIKSSKDTRYA+D
Sbjct: 17  NSGRDRVGLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAID 76

Query: 71  SVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGK 130
           SVVTHDGAK PCWALP+L+SFRQK G+DAY KLDVIG+DEAQFF+DLY+FCC+ AD DGK
Sbjct: 77  SVVTHDGAKLPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGK 136

Query: 131 IIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAG 190
            ++VAGLDGDYLRR FGSVLD++PLADTVTKLTARCELCGKRAFFTLRKTEET TE+I G
Sbjct: 137 TVVVAGLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGG 196

Query: 191 ADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 235
           ADVYMPVCR HY NGQ VI +++N+L    +++ S +EA  + I
Sbjct: 197 ADVYMPVCRQHYVNGQVVIGAARNVLEFHKVQSKSCVEAAAAAI 240

BLAST of CmaCh20G006680 vs. TrEMBL
Match: A0A067ETL2_CITSI (Thymidine kinase OS=Citrus sinensis GN=CISIN_1g026304mg PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93
Identity = 163/224 (72.77%), Postives = 193/224 (86.16%), Query Frame = 1

Query: 11  DGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVD 70
           + G    G PHR +GE+HVI+GPMFAGKTTALLRRI++ES +GRN+ MIKSSKDTRYA+D
Sbjct: 17  NSGRDRVGLPHRNSGEIHVIMGPMFAGKTTALLRRIRSESDNGRNIAMIKSSKDTRYAID 76

Query: 71  SVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGK 130
           SVVTHDGAK PCWALP+L+SFRQK G+DAY KLDVIG+DEAQFF+DLY+FCC+ AD DGK
Sbjct: 77  SVVTHDGAKLPCWALPELTSFRQKLGDDAYAKLDVIGIDEAQFFEDLYEFCCNAADHDGK 136

Query: 131 IIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAG 190
            ++VAGLDGDYLRR FGSVLD++PLADTVTKLTARCELCGKRAFFTLRKTEET TE+I G
Sbjct: 137 TVVVAGLDGDYLRRSFGSVLDIIPLADTVTKLTARCELCGKRAFFTLRKTEETETEIIGG 196

Query: 191 ADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 235
           ADVYMPVCR HY NGQ VI +++N+L    +++ S +EA  + I
Sbjct: 197 ADVYMPVCRQHYVNGQVVIGAARNVLEFHKVQSKSCVEAAAAAI 240

BLAST of CmaCh20G006680 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase)

HSP 1 Score: 310.8 bits (795), Expect = 7.0e-85
Identity = 146/195 (74.87%), Postives = 169/195 (86.67%), Query Frame = 1

Query: 22  RVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAKFP 81
           R +G VHVI+GPMF+GK+T+LLRRIK+E S GR+V M+KSSKDTRYA DSVVTHDG  FP
Sbjct: 28  RGSGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFP 87

Query: 82  CWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDGDY 141
           CWALPDL SF +KFG DAYNKLDVIG+DEAQFF DLY+FCC VAD DGKI+IVAGLDGDY
Sbjct: 88  CWALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDY 147

Query: 142 LRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCRHH 201
           LRR FG+VLD++P+AD+VTKLTARCE+CG +AFFTLRK  +TRTELI GADVYMPVCR H
Sbjct: 148 LRRSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKH 207

Query: 202 YANGQEVIQSSKNIL 217
           Y     VI++SK +L
Sbjct: 208 YITNHIVIKASKKVL 222

BLAST of CmaCh20G006680 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase)

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-81
Identity = 137/218 (62.84%), Postives = 180/218 (82.57%), Query Frame = 1

Query: 2   ESLRNSFSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKS 61
           ++ R + S+    +S+ SP    GE+HV++GPMF+GKTT LLRRI AE  +G+ + +IKS
Sbjct: 58  KATRVTSSSSSQPLSSSSP----GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKS 117

Query: 62  SKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAY-NKLDVIGVDEAQFFDDLYDF 121
           +KDTRY  +S+VTHDG K+PCW+LPDLSSF+++FG D Y N+LDVIG+DEAQFF DLY+F
Sbjct: 118 NKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEF 177

Query: 122 CCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKT 181
           C + ADK+GK +IVAGLDGD++RRRFGSVLD++P+ADTVTKLT+RCE+CGKRA FT+RKT
Sbjct: 178 CREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKT 237

Query: 182 EETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGS 219
           EE  TELI GA+VYMPVCR HY  GQ V+++++ +L S
Sbjct: 238 EEKETELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

BLAST of CmaCh20G006680 vs. NCBI nr
Match: gi|659128400|ref|XP_008464186.1| (PREDICTED: thymidine kinase [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 2.2e-109
Identity = 202/237 (85.23%), Postives = 217/237 (91.56%), Query Frame = 1

Query: 1   MESLRNSFS---TDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60
           MES R+S S   ++  A+   S HR+ GEVHVIIGPMFAGKTTALLRRIK+ S+SGRNVV
Sbjct: 1   MESCRSSLSLTSSNADAIRPESSHRLTGEVHVIIGPMFAGKTTALLRRIKSASNSGRNVV 60

Query: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120
           MIKSSKDTRYAVDSVVTHDGAKFPCWALP LSSFRQKFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPHLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEALPSLI 235
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKN++GSR +   SNLEALPSLI
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYATGQEVIQSSKNVMGSRTI--ASNLEALPSLI 235

BLAST of CmaCh20G006680 vs. NCBI nr
Match: gi|778712324|ref|XP_011656878.1| (PREDICTED: thymidine kinase [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 7.9e-107
Identity = 199/233 (85.41%), Postives = 211/233 (90.56%), Query Frame = 1

Query: 1   MESLRNSF---STDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60
           MES R S    S+    V   S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESCRTSLPFTSSYADTVRPESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALPDLSSFRQKFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEAL 231
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKN +GSR +   SNLEAL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYAIGQEVIQSSKNAMGSRTI--ASNLEAL 231

BLAST of CmaCh20G006680 vs. NCBI nr
Match: gi|700191384|gb|KGN46588.1| (hypothetical protein Csa_6G110310 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 7.9e-107
Identity = 199/233 (85.41%), Postives = 211/233 (90.56%), Query Frame = 1

Query: 1   MESLRNSF---STDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVV 60
           MES R S    S+    V   S HR+AGEVHVIIGPMFAGKTTALLRRIK+ES+SGRNVV
Sbjct: 1   MESCRTSLPFTSSYADTVRPESSHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVV 60

Query: 61  MIKSSKDTRYAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDL 120
           MIKSSKDTRYA+DSVVTHDG KFPCWALPDLSSFRQKFGEDAYN+LDVIGVDEAQFFDDL
Sbjct: 61  MIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYNELDVIGVDEAQFFDDL 120

Query: 121 YDFCCDVADKDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180
           YDFCC+VAD+DGKII+VAGLDGDYLRR FGSVLDVVPLADTVTKLTARCELCGKRAFFTL
Sbjct: 121 YDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLTARCELCGKRAFFTL 180

Query: 181 RKTEETRTELIAGADVYMPVCRHHYANGQEVIQSSKNILGSRALRTGSNLEAL 231
           RKTEET+TELIAGADVYMPVCRHHYA GQEVIQSSKN +GSR +   SNLEAL
Sbjct: 181 RKTEETKTELIAGADVYMPVCRHHYAIGQEVIQSSKNAMGSRTI--ASNLEAL 231

BLAST of CmaCh20G006680 vs. NCBI nr
Match: gi|359485880|ref|XP_003633348.1| (PREDICTED: thymidine kinase [Vitis vinifera])

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 167/213 (78.40%), Postives = 188/213 (88.26%), Query Frame = 1

Query: 7   SFSTDGGAVSAGSPHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTR 66
           S ++ GG    GS HR  GEVHVI+GPMFAGKTTALLRRIK+ES++GRNV MIKSSKDTR
Sbjct: 9   SLTSTGGV---GSIHRALGEVHVIVGPMFAGKTTALLRRIKSESNNGRNVAMIKSSKDTR 68

Query: 67  YAVDSVVTHDGAKFPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVAD 126
           YA DS+VTHDG KFPCWALPDLSSFRQKFG +AY KL+VIG+DEAQFF+DLYDFCC+VAD
Sbjct: 69  YATDSIVTHDGVKFPCWALPDLSSFRQKFGAEAYEKLEVIGIDEAQFFEDLYDFCCEVAD 128

Query: 127 KDGKIIIVAGLDGDYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTE 186
            DGK +IVAGLDGDYLRR FGSVLDV+PLAD+VTKLTARCELCGKRAFFTLRK EE +TE
Sbjct: 129 HDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTLRKIEEMQTE 188

Query: 187 LIAGADVYMPVCRHHYANGQEVIQSSKNILGSR 220
           LI GAD+YMPVCR HY NGQ VI++++N L SR
Sbjct: 189 LIGGADIYMPVCRQHYVNGQAVIEAARNALESR 218

BLAST of CmaCh20G006680 vs. NCBI nr
Match: gi|470114497|ref|XP_004293451.1| (PREDICTED: thymidine kinase [Fragaria vesca subsp. vesca])

HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93
Identity = 167/212 (78.77%), Postives = 187/212 (88.21%), Query Frame = 1

Query: 20  PHRVAGEVHVIIGPMFAGKTTALLRRIKAESSSGRNVVMIKSSKDTRYAVDSVVTHDGAK 79
           P   +GEVHVI+GPMFAGKTTALLRRIK+E +SGRNVVMIKSSKD RYAVDSVVTHDGAK
Sbjct: 33  PSIPSGEVHVIMGPMFAGKTTALLRRIKSEGASGRNVVMIKSSKDNRYAVDSVVTHDGAK 92

Query: 80  FPCWALPDLSSFRQKFGEDAYNKLDVIGVDEAQFFDDLYDFCCDVADKDGKIIIVAGLDG 139
           FPCWALPDLSSFR KFG DAY+KLDVIG+DEAQFF+DLYDFCC  AD DGK +IVAGLDG
Sbjct: 93  FPCWALPDLSSFRLKFGGDAYDKLDVIGIDEAQFFEDLYDFCCTAADHDGKTVIVAGLDG 152

Query: 140 DYLRRRFGSVLDVVPLADTVTKLTARCELCGKRAFFTLRKTEETRTELIAGADVYMPVCR 199
           DYLRR FGSVLDVVPLADTVTKLTARCE+CGKRAFFTLRKTEET+TELI GADVYMPVCR
Sbjct: 153 DYLRRSFGSVLDVVPLADTVTKLTARCEMCGKRAFFTLRKTEETKTELIGGADVYMPVCR 212

Query: 200 HHYANGQEVIQSSKNILGSRALRTGSNLEALP 232
            HY NGQ +I++++ ++ S   ++G+  E  P
Sbjct: 213 QHYVNGQVLIKAARTVVESHKFKSGTISEVAP 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KITH_ORYSJ4.2e-8468.90Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2[more]
KITHA_ARATH1.2e-8374.87Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1[more]
KITHB_ARATH8.3e-8062.84Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1[more]
KITH_SWPVK3.6e-3542.13Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1[more]
KITH_DICDI1.1e-3443.72Thymidine kinase 1 OS=Dictyostelium discoideum GN=thyB PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAS7_CUCSA5.5e-10785.41Thymidine kinase OS=Cucumis sativus GN=Csa_6G110310 PE=3 SV=1[more]
F6HHL3_VITVI9.2e-9478.40Thymidine kinase OS=Vitis vinifera GN=VIT_12s0057g00500 PE=3 SV=1[more]
A0A0H3WBS8_9ROSA2.0e-9378.30Thymidine kinase OS=Rubus deliciosus GN=TK1 PE=2 SV=1[more]
V4W4L4_9ROSI3.5e-9372.77Thymidine kinase OS=Citrus clementina GN=CICLE_v10016471mg PE=3 SV=1[more]
A0A067ETL2_CITSI3.5e-9372.77Thymidine kinase OS=Citrus sinensis GN=CISIN_1g026304mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07800.17.0e-8574.87 Thymidine kinase[more]
AT5G23070.14.7e-8162.84 Thymidine kinase[more]
Match NameE-valueIdentityDescription
gi|659128400|ref|XP_008464186.1|2.2e-10985.23PREDICTED: thymidine kinase [Cucumis melo][more]
gi|778712324|ref|XP_011656878.1|7.9e-10785.41PREDICTED: thymidine kinase [Cucumis sativus][more]
gi|700191384|gb|KGN46588.1|7.9e-10785.41hypothetical protein Csa_6G110310 [Cucumis sativus][more]
gi|359485880|ref|XP_003633348.1|1.3e-9378.40PREDICTED: thymidine kinase [Vitis vinifera][more]
gi|470114497|ref|XP_004293451.1|1.7e-9378.77PREDICTED: thymidine kinase [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001267Thymidine_kinase
IPR020633Thymidine_kinase_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0004797thymidine kinase activity
GO:0005524ATP binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006230 TMP biosynthetic process
biological_process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
biological_process GO:0046104 thymidine metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0004797 thymidine kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G006680.1CmaCh20G006680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001267Thymidine kinasePIRPIRSF035805Tdkcoord: 22..215
score: 1.4
IPR001267Thymidine kinasePANTHERPTHR11441THYMIDINE KINASEcoord: 8..225
score: 2.5E
IPR001267Thymidine kinasePFAMPF00265TKcoord: 25..202
score: 4.0
IPR020633Thymidine kinase, conserved sitePROSITEPS00603TK_CELLULAR_TYPEcoord: 189..202
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 25..163
score: 7.25
NoneNo IPR availableGENE3DG3DSA:3.30.60.20coord: 163..205
score: 2.5
NoneNo IPR availablePANTHERPTHR11441:SF2THYMIDINE KINASEcoord: 8..225
score: 2.5E
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 163..205
score: 6.65

The following gene(s) are paralogous to this gene:

None