CmaCh12G008840 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G008840
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMaturase K
LocationCma_Chr12 : 6687743 .. 6692568 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTCGATGCAAATCTGGAAGATGAGGGGTCAAGAGGTTTTCATTCCAGGGTAACACATTCCCTTTAAGACTGACTGCTGAGGCTATCAATGCCGTGTATGGGTTTGAAGATTATGTGGATAAATGCTCTCACTTTGTGAAAGCCATGATTTAGGATTGAGAAGAAGGTTCTAGGTTGTAGAACGGTAGAAGTGGAAAAATGAAAAGTCAAGGTCCAACAAAAATATTTATACGCACTCACAATAAAAGCCCCAAGGTAGGGTTCATTTTACACCTTTTTCTATCGTGCAGCTTTGCCATAAGACTTCCCAAAACTTGTTTTCCATTTTCGTATGGGAAATGGCAAGGGCGAAACAGATGGTAGATTTATTGATGTTTGTAACTAATAAACATACTTTTAGAAGTAAGGCAATGGTAAAGTATTATCATAAAAGATATGTTAAGAGAGAAATAATAGAATTATCAAATGGGATGATATATGATTTAAGATTTTGTGGGAGATCAGTTTTCCTTCCTTCTTGGAACCCCATACAAGTGTTGTTTTATAACTATAATCTCTTATCTATTAGTACCAAATGAAGGCATCTATTGAAACTCTTTTGGCCTTTTGCATGAACAGCTCATTTGATGAATGAAATGGTACCCTTTTTAAAAAAAATATATATGCACACAATGAAATCAAATACTAGTTGGATTTAAATTTGAAGAAAGAACCACGAAAAATTTGTTTGGTTGACAAGAATCTGAATGATACCTCAGTGGGGGATGAAATGAGGGATTCTCTGCCAGAATCAAAAGGGCCATTGAGACTCCTGCAAAAGTGTTGGTGGTACATCAATTTAAGTCCAAACTACATTAAGATGTATGAGGAAATATATGAATACCTTGGCCTCTCAGACTTGGCAAGATGTTTAGACATAATTGATGCCTGAAATAAAAGCCAATTTTGACAGCTAGTGAGTACTAAAAACTTTAGCTTCTCCAAATAGTATATGAATATTTTGGTTTCATAAGATAGAAAAGGAATGTATATGGCATAACACAAATTAGGCAGAAGAAAGAAAGTCCAAACGTTATCTTTATGACCTAAATATTCAGAGAAAATTGCAGCATAACTGCTAGTGTAAAAGAATCTCTTCTATTTCCAGACGAGCAGCAGCTTTACCAGCACACCAAATGCAGAGAAATCATAAATTGCACTGATTTGGATAATGTGAATGCTTTTCACGCAACACAAACAGTAAAAAATAAAGAGGCAAGGCCTCAAAATATTAAAATTGCAAAATCTTATAATTTACGATCAAGTCATTCAATGTTTCCTTTTTTAGAGGATAAATTAGTACATTTAAATTATGTGTCAGATGTATTAATCCCCTACCCTTCATCTGAAAATTTTAGTTCAAATCTTTCGCTCCGGGGTGAAAGATGCATCTTCTTTTCATTTATTGCGGTTCTTTTTTCATGAGTATTGTATTTGGAATAGTCTTAGTACTTCAAAAAAAATTGATTTCTTTTTTTTTTCAAAAAGAAATCAAAGATTAGTCGTGTTCCTATACAATTATTATGTATGTGAATACAAATCCATTTTCCTTTTTCTACGTAACCAATCTTCTCATATACGATTAACTTCTTATAGGGGTCCTTTTGAACGAATATATCATAAAAACATTAACAGATATACAAAGTCTAAAGTTCTTTTTTTTCCCTCCCTTGAGAAACATACAAGTTAGGCGCATACAAATTCTAATTTGCTGAGAAATAAAAATAGAGTACCTGCTCCTGGATTATGCTCCTTGCCTCTACAAGTTGTGCTTCTAACTCAAGTTCCCTCTCGGTAGCTTCAGAAGTAACTTCAGATTCTTTCTGAGCATCATGCAGCTGACCCATCCGCTCCTTCAAATTTCAAAACACTATTACTAACAAGCATTCATCTGTCTAGAAGAAAGTGATGTAGAATGAAAAACAAATCACCTTTATAGAAGCCATCTTATTTCGAAGGTTCTCTTCAATTTTATCTCTTGCCATATGAAAGGGAAGGTCAAATACATCCTGCAATAAAACAATATAAGTGTTATTACCAATGCACCAATCAAGTTAGCATATGAGCATAGTTCAGCCCATACCGTCCTCCCACCAAATGGAGACTGTGCACCTTCACTTTCAACTCTTTCATTAACTGTAAGGGGCTGCTTAGGTAGTCCATTTGGAGCATTTAGGAAATCCCGCATATCGACCTGCAAAACAATACACAAGATAAACTGAACTCCCATTGGCATATATGTCAAAAGTACATATGGAAGACACAAGCATAACTCAAAAACATACAAAAGAAAAAAAAAAACAGAATATATGAGTGTAGCCAACTAAAAAGATGCATGTTACGAATTCAAAAAATAAGGAACATGCCATTATTAATAAAAGGGAGAAATAAAACGAACTAGTAGAAGTATTCTAGAAATCAATTAAAGTGTACACACACATAGACTACTATCATTTATCATTTTTCTACTTTCTATTTTGAAGAGATGCCAAGTTTTCATTTTAAATGAAAGAATACAAAAAACAAAAGATTCATGAGCATACAAAATACAGACTACACCAAAGGAGCCAAGCAACTAGCCATACAAAAAAGGAATCCAATCCAAAATAATAAGACCAAACAAGTAATTACAAAAATCCTCGGACACTTGCACCCAAACAGAAGTGTTAAGCCTTGCTAGCGACCAAACCACCTCTCAAGCCATCTTCACATCCCAAAGACTATCATTCCTTCCAAGCCAAAGACCCCAAAGGGTAGCAAAGAAACCAGTCTGCCACAAACCCAACGCATAGCATGAAATGGTGATGTAAGAGAATACCCTCCATCATAAACTGCACTCCCTGCTTCTGAAAGTGCTAACATCAAAAGGCTGGAAAAAACAATCCTAGCACCACTCTGGGTCCACCACTGCAGACGAATATCTCACACAAACTACTATCATAGTGATCCAAAAAGTTCAAATATCCTATACATCAACCAATGAGGTTCAAAAGTACCATACTAGCCATACACTTACATAAAAGATCAAAAGAACGAATGACGACCTCAGTATTGTAAAATCCAGCACAAAAAATTGTAGACGTATTTTGTGCCCGTATCTTATTGCATGCCCACCATTTCAAAATTTATACGATAAGAATTTCAGTGAACTAAGAGTACAAATAGTTATGAAATGGCTGTAAACCTGCATTGAACGCAACAATGCCTTTAAATCAGCATTCTCTGACATCAGTTCTTGATTTTTTACTTCATAAGCATCCACCTGAACGAGAAATATTTGTAAGAATATTAAAATCACTAAACTTCAAATCAAGCTCTTGATCAAATCTTTTTAAATGAAGAAAGTTGTTCACATACTATCTTTTTATAGAAATCATTATCAGTCTTCTTTCCATTCCAAGTTCCTCGTTGTCGTCCTTCTTTCTGCTCATACCATAAAAGCCATTGAGTGACTGGAATGATCCATTATCTCTACATCATTAATAAAGAATAAAAATATACCTGTAGCAAATTCATTATCTCCATTCCTGATCTAGACTCTTTCTTTTTCTCCATTAAAACTTGGTTTAGCCTCTCCTGCAGACATACAAGAGCTTCTCTTTGTAAATATTAATCTTCTCCAACAAAAATCAAGGACTGAAAAACATCATAGAGACTATCCCACCTGCAATTTGATATACTCCTTTTCTTTCTTCTTCATCTCATGTACTTGTTGAGTCCTTACTTGCTTTGGCCATATAAACAGAAAGTATATTTCTTCATCAATACATACATTATCACATAAAAACCAGTATCTATCTCACAGTATCCAACTACCCTAACCTGATTGCCAATAACCATTCTTTGAAACTCATCCTTTTCCTGCTGTAGCTTTTCGATTTGGGCTTTAAAAGCAGCCTTCGCTTTGGCTTCCTAATGAGAAATAATTTCCTTGTTAAATAAGAATAAGAAAGAGAAATTATATAATTCAAAGAAGTTCTGAGATTGTACTGTTCGCGTAATTGTGGCAATCTCCCTATCTTTAGCTTGTATTACTGAATCCAGCCTCTCAACTTTAGTCTCCAATCTTGATATGTCTGAAAGTAGTCTGTTACAAGAAAAGGAATGGAGATGTAAACAAATAGAAAGCTAAGCTGATAGCAGTATTTCAAGGGGTCATGAAGTGAATTAGAATAAGATATTCCATTTCATATAATGGACATAAAAAGTCGTCAAAATTTAGAATGAAGACAAGATAAAGATTAGATGCAAAGGTGTGGATATTCTCTGGGTGAAAATATTGAATAATAAGGAGCTAACCACTTCAAATGATTTACAACTACATAAACAGAAAGCTTTCTAGACCATTTCAAATGACTTGATAAAGTAAGGAATGTGTTGACTATATGAGATTATGGTGTTTTTATTTTCTCTTCTAGGGTTTTGGTAGGTAAATCTTTCAGTAGTTGTGAGCTATCTCTGAAATGTACCAATTGGAGGAATCTCCTGTTAACTCTTTTGGTTTCGTAAGTTGATGCTAGTTCCATTTCATTTATCAATTAAATTTTTTCCTATTAAAGCAAAAGTACTACCAAACAGAGCATCTTTTGATGAATTTCACAGAGACATATCAATATATTCATTAATTGAAGCGCTTGGCGATGTCAGACGCTGTACCGATTCTGCAAAATGTCAATACCTTTGTCTCTGTTCATTAGCAGATTCCCTAAACTCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCACGTCCTCGCAATCGACACCTATAG

mRNA sequence

ATGGAACTCGATGCAAATCTGGAAGATGAGGGGTCAAGAGGTTTTCATTCCAGGCTTTGCCATAAGACTTCCCAAAACTTGTTTTCCATTTTCGTATGGGAAATGGCAAGGGCGAAACAGATGAAAGAACCACGAAAAATTTGTTTGGTTGACAAGAATCTGAATGATACCTCAGTGGGGGATGAAATGAGGGATTCTCTGCCAGAATCAAAAGGGCCATTGAGACTCCTGCAAAAGTGTTGGTGGTACATCAATTTAAGTCCAAACTACATTAAGATAGAAAATTGCAGCATAACTGCTAGTGTAAAAGAATCTCTTCTATTTCCAGACGAGCAGCAGCTTTACCAGCACACCAAATGCAGAGAAATCATAAATTGCACTGATTTGGATAATGTGAATGCTTTTCACGCAACACAAACAGTAAAAAATAAAGAGGCAAGGCCTCAAAATATTAAAATTGCAAAATCTTATAATTTACGATCAAGTCATTCAATGTTTCCTTTTTTAGAGGATAAATTAGTACATTTAAATTATGTGTCAGATGTATTAATCCCCTACCCTTCATCTGAAAATTTTAGTTCAAATCTTTCGCTCCGGGGTGAAAGATGCATCTTCTTTTCATTTATTGCGGGTTTTGGTAGATTCCCTAAACTCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCACGTCCTCGCAATCGACACCTATAG

Coding sequence (CDS)

ATGGAACTCGATGCAAATCTGGAAGATGAGGGGTCAAGAGGTTTTCATTCCAGGCTTTGCCATAAGACTTCCCAAAACTTGTTTTCCATTTTCGTATGGGAAATGGCAAGGGCGAAACAGATGAAAGAACCACGAAAAATTTGTTTGGTTGACAAGAATCTGAATGATACCTCAGTGGGGGATGAAATGAGGGATTCTCTGCCAGAATCAAAAGGGCCATTGAGACTCCTGCAAAAGTGTTGGTGGTACATCAATTTAAGTCCAAACTACATTAAGATAGAAAATTGCAGCATAACTGCTAGTGTAAAAGAATCTCTTCTATTTCCAGACGAGCAGCAGCTTTACCAGCACACCAAATGCAGAGAAATCATAAATTGCACTGATTTGGATAATGTGAATGCTTTTCACGCAACACAAACAGTAAAAAATAAAGAGGCAAGGCCTCAAAATATTAAAATTGCAAAATCTTATAATTTACGATCAAGTCATTCAATGTTTCCTTTTTTAGAGGATAAATTAGTACATTTAAATTATGTGTCAGATGTATTAATCCCCTACCCTTCATCTGAAAATTTTAGTTCAAATCTTTCGCTCCGGGGTGAAAGATGCATCTTCTTTTCATTTATTGCGGGTTTTGGTAGATTCCCTAAACTCAATGTCACGCTGCCTCTGCTGAAGCAAGAAATATATACAATTGCACGTCCTCGCAATCGACACCTATAG

Protein sequence

MELDANLEDEGSRGFHSRLCHKTSQNLFSIFVWEMARAKQMKEPRKICLVDKNLNDTSVGDEMRDSLPESKGPLRLLQKCWWYINLSPNYIKIENCSITASVKESLLFPDEQQLYQHTKCREIINCTDLDNVNAFHATQTVKNKEARPQNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYPSSENFSSNLSLRGERCIFFSFIAGFGRFPKLNVTLPLLKQEIYTIARPRNRHL
Homology
[Close]
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match: MATK_CUCSA (Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-11
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +IAKSYNLRSSHS+FPFLEDK  HLNYVSDVLIPYP
Sbjct: 118 EIAKSYNLRSSHSIFPFLEDKFPHLNYVSDVLIPYP 153

[Close]
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match: MATK_SPICA (Maturase K OS=Spiraea cantoniensis GN=matK PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +I KSYNLRS HS+FPFLEDK  HLNYVSDVLIPYP
Sbjct: 120 EIVKSYNLRSLHSLFPFLEDKFPHLNYVSDVLIPYP 155

[Close]
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match: MATK_ADEFA (Maturase K OS=Adenostoma fasciculatum GN=matK PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +I KSYNLRS HS+FPFLEDK  HLNYVSDVLIPYP
Sbjct: 118 EIVKSYNLRSIHSIFPFLEDKFSHLNYVSDVLIPYP 153

[Close]
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match: MATK_VAUCA (Maturase K OS=Vauquelinia californica GN=matK PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +I KSYNLRS HS+FPFLEDK  HLNYVSDVLIPYP
Sbjct: 118 EIVKSYNLRSIHSIFPFLEDKFPHLNYVSDVLIPYP 153

[Close]
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match: MATK_ALPZE (Maturase K OS=Alpinia zerumbet GN=matK PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 28/37 (75.68%), Postives = 36/37 (97.30%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYPS 189
           +I KS+NL+SSHS+FPFLEDKL+HLNY+SD+LIPYP+
Sbjct: 125 EIPKSHNLQSSHSIFPFLEDKLLHLNYLSDILIPYPA 161

[Close]
BLAST of CmaCh12G008840 vs. TrEMBL
Match: A0A0B4L7W6_9ROSI (Maturase K (Fragment) OS=Guaiacum sanctum GN=matK PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 

Query: 149 QNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +N+KIAKSYNLRS HS+FPFLEDKL HLNYVSDVLIPYP
Sbjct: 115 ENLKIAKSYNLRSIHSIFPFLEDKLSHLNYVSDVLIPYP 153

[Close]
BLAST of CmaCh12G008840 vs. TrEMBL
Match: A1XIZ5_9ROSI (Maturase K (Fragment) OS=Guaiacum officinale GN=matK PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 

Query: 149 QNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +N+KIAKSYNLRS HS+FPFLEDKL HLNYVSDVLIPYP
Sbjct: 86  ENLKIAKSYNLRSIHSIFPFLEDKLSHLNYVSDVLIPYP 124

[Close]
BLAST of CmaCh12G008840 vs. TrEMBL
Match: H1ZTU0_9CARY (Maturase K OS=Pilosocereus chrysacanthus GN=matK PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.9e-10
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP-SSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYV ++LIPYP   E     L   GERC FF+FI
Sbjct: 121 KIVKSHNLRSIHSIFPFFEDKFLHLNYVLEILIPYPIHLEILVQTLRYWGERCFFFAFI 179

[Close]
BLAST of CmaCh12G008840 vs. TrEMBL
Match: H1ZTT9_9CARY (Maturase K OS=Opuntia decumbens GN=matK PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.4e-10
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP-SSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYV  +LIPYP   E     L   GERC FF+FI
Sbjct: 121 KIVKSHNLRSIHSIFPFFEDKFLHLNYVLKILIPYPIHLEILVQTLRYLGERCFFFAFI 179

[Close]
BLAST of CmaCh12G008840 vs. TrEMBL
Match: H1ZUF0_9CARY (Maturase K OS=Ferocactus wislizeni GN=matK PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.4e-10
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYPSSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYVS   +P+ SS N  SN SL GERC FF+FI
Sbjct: 59  KIVKSHNLRSIHSIFPFFEDKFLHLNYVS---LPH-SSGNLGSNSSLLGERCFFFAFI 112

[Close]
BLAST of CmaCh12G008840 vs. TAIR10
Match: ATCG00040.1 (ATCG00040.1 maturase K)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 

Query: 149 QNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           Q  ++ KSYNL+S HS+FPFLEDKL H NYV DVLIPYP
Sbjct: 142 QGKQLKKSYNLQSIHSIFPFLEDKLGHFNYVLDVLIPYP 180

[Close]
BLAST of CmaCh12G008840 vs. NCBI nr
Match: gi|578888510|gb|AHI16554.1| (maturase K, partial (chloroplast) [Guaiacum sanctum])

HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 

Query: 149 QNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +N+KIAKSYNLRS HS+FPFLEDKL HLNYVSDVLIPYP
Sbjct: 115 ENLKIAKSYNLRSIHSIFPFLEDKLSHLNYVSDVLIPYP 153

[Close]
BLAST of CmaCh12G008840 vs. NCBI nr
Match: gi|89242614|gb|ABD64665.1| (maturase K, partial (chloroplast) [Guaiacum officinale])

HSP 1 Score: 73.9 bits (180), Expect = 4.2e-10
Identity = 34/39 (87.18%), Postives = 37/39 (94.87%), Query Frame = 1 

Query: 149 QNIKIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP 188
           +N+KIAKSYNLRS HS+FPFLEDKL HLNYVSDVLIPYP
Sbjct: 86  ENLKIAKSYNLRSIHSIFPFLEDKLSHLNYVSDVLIPYP 124

[Close]
BLAST of CmaCh12G008840 vs. NCBI nr
Match: gi|374265460|emb|CBV65495.1| (maturase K (chloroplast) [Pilosocereus chrysacanthus])

HSP 1 Score: 73.2 bits (178), Expect = 7.1e-10
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP-SSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYV ++LIPYP   E     L   GERC FF+FI
Sbjct: 121 KIVKSHNLRSIHSIFPFFEDKFLHLNYVLEILIPYPIHLEILVQTLRYWGERCFFFAFI 179

[Close]
BLAST of CmaCh12G008840 vs. NCBI nr
Match: gi|374265458|emb|CBV65494.1| (maturase K (chloroplast) [Opuntia decumbens])

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYP-SSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYV  +LIPYP   E     L   GERC FF+FI
Sbjct: 121 KIVKSHNLRSIHSIFPFFEDKFLHLNYVLKILIPYPIHLEILVQTLRYLGERCFFFAFI 179

[Close]
BLAST of CmaCh12G008840 vs. NCBI nr
Match: gi|374265881|emb|CBV65705.1| (maturase K (chloroplast) [Ferocactus wislizeni])

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 1 

Query: 152 KIAKSYNLRSSHSMFPFLEDKLVHLNYVSDVLIPYPSSENFSSNLSLRGERCIFFSFI 210
           KI KS+NLRS HS+FPF EDK +HLNYVS   +P+ SS N  SN SL GERC FF+FI
Sbjct: 59  KIVKSHNLRSIHSIFPFFEDKFLHLNYVS---LPH-SSGNLGSNSSLLGERCFFFAFI 112

The following BLAST results are available for this feature:
BLAST of CmaCh12G008840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MATK_CUCSA4.9e-1188.89Maturase K OS=Cucumis sativus GN=matK PE=3 SV=1[more]
MATK_SPICA5.4e-1083.33Maturase K OS=Spiraea cantoniensis GN=matK PE=3 SV=1[more]
MATK_ADEFA7.1e-1083.33Maturase K OS=Adenostoma fasciculatum GN=matK PE=3 SV=1[more]
MATK_VAUCA7.1e-1083.33Maturase K OS=Vauquelinia californica GN=matK PE=3 SV=1[more]
MATK_ALPZE7.1e-1075.68Maturase K OS=Alpinia zerumbet GN=matK PE=3 SV=1[more]
BLAST of CmaCh12G008840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B4L7W6_9ROSI2.9e-1087.18Maturase K (Fragment) OS=Guaiacum sanctum GN=matK PE=3 SV=1[more]
A1XIZ5_9ROSI2.9e-1087.18Maturase K (Fragment) OS=Guaiacum officinale GN=matK PE=3 SV=1[more]
H1ZTU0_9CARY4.9e-1061.02Maturase K OS=Pilosocereus chrysacanthus GN=matK PE=4 SV=1[more]
H1ZTT9_9CARY8.4e-1061.02Maturase K OS=Opuntia decumbens GN=matK PE=4 SV=1[more]
H1ZUF0_9CARY8.4e-1065.52Maturase K OS=Ferocactus wislizeni GN=matK PE=4 SV=1[more]
BLAST of CmaCh12G008840 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00040.11.3e-0971.79ATCG00040.1 maturase K[more]
BLAST of CmaCh12G008840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|578888510|gb|AHI16554.1|4.2e-1087.18maturase K, partial (chloroplast) [Guaiacum sanctum][more]
gi|89242614|gb|ABD64665.1|4.2e-1087.18maturase K, partial (chloroplast) [Guaiacum officinale][more]
gi|374265460|emb|CBV65495.1|7.1e-1061.02maturase K (chloroplast) [Pilosocereus chrysacanthus][more]
gi|374265458|emb|CBV65494.1|1.2e-0961.02maturase K (chloroplast) [Opuntia decumbens][more]
gi|374265881|emb|CBV65705.1|1.2e-0965.52maturase K (chloroplast) [Ferocactus wislizeni][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024942Maturase_MatK_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
biological_process GO:0008033 tRNA processing
cellular_component GO:0009507 chloroplast
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G008840.1CmaCh12G008840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024942Maturase MatK, N-terminal domainPFAMPF01824MatK_Ncoord: 149..187
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G008840Watermelon (97103) v2cmawmbB172
CmaCh12G008840Watermelon (97103) v2cmawmbB188
CmaCh12G008840Wax gourdcmawgoB0184
CmaCh12G008840Wax gourdcmawgoB0235
CmaCh12G008840Cucurbita maxima (Rimu)cmacmaB125
CmaCh12G008840Cucurbita maxima (Rimu)cmacmaB191
CmaCh12G008840Cucumber (Gy14) v1cgycmaB0181
CmaCh12G008840Cucurbita moschata (Rifu)cmacmoB175
CmaCh12G008840Cucurbita moschata (Rifu)cmacmoB177
CmaCh12G008840Cucurbita moschata (Rifu)cmacmoB191
CmaCh12G008840Wild cucumber (PI 183967)cmacpiB159
CmaCh12G008840Wild cucumber (PI 183967)cmacpiB166
CmaCh12G008840Cucumber (Chinese Long) v2cmacuB161
CmaCh12G008840Cucumber (Chinese Long) v2cmacuB165
CmaCh12G008840Melon (DHL92) v3.5.1cmameB153
CmaCh12G008840Melon (DHL92) v3.5.1cmameB175
CmaCh12G008840Watermelon (Charleston Gray)cmawcgB148
CmaCh12G008840Watermelon (Charleston Gray)cmawcgB165
CmaCh12G008840Watermelon (97103) v1cmawmB176
CmaCh12G008840Watermelon (97103) v1cmawmB180
CmaCh12G008840Cucurbita pepo (Zucchini)cmacpeB175
CmaCh12G008840Cucurbita pepo (Zucchini)cmacpeB182
CmaCh12G008840Cucurbita pepo (Zucchini)cmacpeB195
CmaCh12G008840Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G008840Bottle gourd (USVL1VR-Ls)cmalsiB154
CmaCh12G008840Bottle gourd (USVL1VR-Ls)cmalsiB180
CmaCh12G008840Cucumber (Gy14) v2cgybcmaB056
CmaCh12G008840Cucumber (Gy14) v2cgybcmaB169
CmaCh12G008840Melon (DHL92) v3.6.1cmamedB167
CmaCh12G008840Melon (DHL92) v3.6.1cmamedB190
CmaCh12G008840Silver-seed gourdcarcmaB0076
CmaCh12G008840Silver-seed gourdcarcmaB0831
CmaCh12G008840Cucumber (Chinese Long) v3cmacucB0182
CmaCh12G008840Cucumber (Chinese Long) v3cmacucB0193