CmaCh12G006760 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr12 : 3653173 .. 3656018 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTTTCTTAAAAGGAAGTGCAGAAGCTGAACGACTTGTTCCTCAAGATATCTGGGTCAATTTTTTTCACGAGAAATCAAGCAACACAAAGACTCCCGCGATCTTCCCAATCTTTCTCACAACTCTCTCTCTCAAGGTTCTTAACTTCTTTTTCTCTCCATTTTTTATCTGCCATGTTTTTGTTTATAGCATTTCTCTCTCTCGGCGATGGTTTACGATTTGTCTGGTGAATTATGCTGTGTTTGATAGTTTGTTTTTATAGTTTCTGCTAGTTTCGTTGTGTTCTTTGATCCTCTGCGGAATTAGGGAGGAAAAACAATGAATTCTGTATGCCTCCAGTTCTCCCTCTCTTCTCTGTTTTTGTCTCGTCTCTGCATCATATTCTGTACAGAAAATTTATTGATGAGCCTCACACTACGTGTCTGCCTGTTTCGAAGAATCAAATGTGAATTTCCAGTTTCTGTGCTCTCAATTATAATTACCGTTGCTTTTAAGATACGTTTATTATTGTGTTCTTCATGGACTTTCAAGCGACACTACAAAAATATGTATAGTTTTAAGCTATAAATTTGAAGTTAGGAAACAAATAATTGCTGTTTCGTAGCCAAAGTAAAAAATCCTGTGTAAAGTGTATGTTGTCTGCTCAACCCAATTCAACACTCTTGGGATTGGATTGGTGTGGAAATTCAAGTTGGTTGAACAATAAGCCCCAAAATTTTGATTGGTGGGTCACTTGGGTCAATTCAATGCTTTCAACACTAAAACATGCCTTCATATGTGTGTATTTCCTTTGTTAATCTATTTCAAATTTGTTGCTGATTTTTCATAATACTAAAGATTTGTAGATCAGTGTGATCTTTCTGATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGGTATGACTTGTAATTATTTGTCTTCTATTTTTCATAATACTATCGTTTTCAATTGGCACTCATTTTTCATTTATGCTTGTCCTGCAATTTCTTCTTTGTTTCATCCAAAGAAATGTTGAAGTTAAGTAACAGTCTGGGTGATCCTGTTACAGATTCAGTCCTAATTGCTAGTTTTCTTCATTTGGATGCCCTATTACTGTTGTTATGTTCACTCACTGTTTCATGGTAAATCCTTGGAGTCCCATGTTCGAAAAAAATGAGCTAGAATGTTTGTAAACTCAATTACAATAGTGACAATCAATGGACAAAAGTATGAACCTGGATAAAGAAGAGTTGGAATAATAGTTTTTAAAAGATATGCCCCTTAAGTATACTATATTCGGTGGGTCTTTGATACAATGCCATTGCAAGTGTACGCACATTACACTCATGGTAGAAAGAAGAACCCATTGGTTGAATTTTTCTTTACGCAGTTCTTTCGGTTTCCGTATTGTAATACTGAGTTCTCCACCTCCATTTCTATTTTTAGTTAATTTCCTTGTTTTAGGAGGATGGTTCTCCATGATTGACTCATGGTTTCATTGACGTAGCAATGTATTTATACAACTTGTATAAATAGTCATAAACATCAATGAAGATGGTACCTAAGAATTTTCAATTCAGTCTTGAGTACTCTTAACTTAAGGTTCCCTCTATTTGAGCCTTACAATTATCCAAAATAGGTCGAAAGAAAAATTCTACTTCTTTCCCCACACTGTCTTTTTCCACTTACAACCCATAACTTGATTGCAGACTTGGACCTGTAACCATCTTTTTCTTTTTAGGATATTAATACCTTCTAGATGTTTGCTTTTAAGTTGACATAATTACTTATGAAAAAAATGTTAATTGAAATGTTTTTTTTCCTCTAAAGATAAAAGAAGTTTCCTTGTATCCTCAAAAATACTAGTAGTAATACTCAAGAAGTTGGTGGTAGAGCTTTCAAATGGAGTTTGTGGTTGATTTCTGAATAATCTACAGATTTTGCTTTGATTGCTGAGGGATTGGCAGAATAAACTTATTCCAATTTTATATTTATACAAACAAATTGATGATGACCTTAAAGCTAAAACCACTTCACTTTGCTCAATGGAAGTGATTACGGCTACCTGACCAATATTCATATCGTATGCGTGGTAGCTTGATCTTGTTGTTGACTGAAACTATGATTTGAAGATCCTGCATTTCCTTTAAAAGGAAAAATTTGTAGTCATAAGGAAGTTTTGGAGTTGTTTAAATGGAGCATTATAGATTGCTGGTCTGAATCTGTTAATTGTACTCACTAAGAATGTGTTCTTGTTGATCTTTCACTTGCTTAATGTTGACTTAGTACTCGGCTGAACATCTCTCGACTACAAAAACCAAAGTTCTTTTGTTCTTGGCATACCATCTTTAAGCCTTCGGATATTTTTATAACCATTCCTTGTGTTCTGTTTGTTAAAATGAATTACAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGAATAGACACTTAGGAATCTTATTCAATCAGGAATGTACCAAAAACTTCAACCATTATGAACTTTCTTCCTAATATTGATGCCCATTCTTCCATAATATTTGAATTTTCTTCCTAGTACACGTTAGTGATACTAACACCATACATCGAATGCTTGCTTGGCTAGCTGCATCAACTTGGATCCGACCTTGAGGTTTAAAATTTGATCAATTTTGGGTGTGGCCTTGTGAGAAGGAATTGATGAGGGGCAAGAAAAAAGGTACGGAATTCTGTAT

mRNA sequence

GATTTTTCTTAAAAGGAAGTGCAGAAGCTGAACGACTTGTTCCTCAAGATATCTGGGTCAATTTTTTTCACGAGAAATCAAGCAACACAAAGACTCCCGCGATCTTCCCAATCTTTCTCACAACTCTCTCTCTCAAGATTTGTAGATCAGTGTGATCTTTCTGATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGAATAGACACTTAGGAATCTTATTCAATCAGGAATGTACCAAAAACTTCAACCATTATGAACTTTCTTCCTAATATTGATGCCCATTCTTCCATAATATTTGAATTTTCTTCCTAGTACACGTTAGTGATACTAACACCATACATCGAATGCTTGCTTGGCTAGCTGCATCAACTTGGATCCGACCTTGAGGTTTAAAATTTGATCAATTTTGGGTGTGGCCTTGTGAGAAGGAATTGATGAGGGGCAAGAAAAAAGGTACGGAATTCTGTAT

Coding sequence (CDS)

ATGGCAACTGAACCGAAGGCAGGTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGACGATGAGTTCGAAGAGTTCGAGATTAATGAAGAGTGGGAAGTCAAGGAAGGTAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGACGATGACGATGTGAATGACGACTTCTCGTTGCAACTTAAGAGAGAATTGGAGGACAATGCTGAGAGAAAATGA

Protein sequence

MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELEDNAERK

Homology

[Close]

BLAST of CmaCh12G006760 vs. Swiss-Prot
Match: SEM12_ARATH (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.6e-21
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA EPKA  E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELEDNAERK 73
          QLK+ELE+ +E+K
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of CmaCh12G006760 vs. Swiss-Prot
Match: SEM11_ARATH (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.8e-21
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 1


Query: 1  MATEPKAGTEEV-KVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA EPKA T EV K+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELEDNAERK 73
           QL++ELE+  ++K
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh12G006760 vs. Swiss-Prot
Match: SEM1_NEUCR (Putative 26S proteasome complex subunit sem-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sem-1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.1e-06
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1


Query: 2  ATEPKAG--TEEVKVDLFEDDDEFEEFEINEEWEVKE------GKEITQQWEDDWDDDDV 61
          +TEPK      E K  + E+DDEFE+F + ++WE ++        E    WE+ WDDDD 
Sbjct: 12 STEPKPEQPVTEKKTAVLEEDDEFEDFPV-DDWEAEDTEAAKGNNEAKHLWEESWDDDDT 71

Query: 62 NDDFSLQLKRELE 67
          +DDFS QLK EL+
Sbjct: 72 SDDFSAQLKEELK 83

[Close]

BLAST of CmaCh12G006760 vs. TrEMBL
Match: A0A0A0KIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. TrEMBL
Match: A0A0A0LU33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046000 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.7e-25
Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K  TEEVK+DLFEDDDEFEEFEINEEWE+K EGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLKRELEDNAERK 73
          QL+RELE N E+K
Sbjct: 61 QLRRELESNTEKK 73

[Close]

BLAST of CmaCh12G006760 vs. TrEMBL
Match: W9RJ80_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010934 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-24
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TEE K+DLFEDDDEFEEFEIN+EWE K EGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATEPKAATEEAKIDLFEDDDEFEEFEINQEWEDKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLKRELEDNAERK 73
          QL+RELE+N ++K
Sbjct: 61 QLRRELENNQDKK 73

[Close]

BLAST of CmaCh12G006760 vs. TrEMBL
Match: A0A0B2P900_GLYSO (Putative 26S proteasome complex subunit sem1-1 OS=Glycine soja GN=glysoja_044941 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.3e-24
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TE+VK+DLFEDDDEFEEFEINEEW+ K EGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLKRELEDNAER 72
          QL+RELE N E+
Sbjct: 61 QLRRELESNTEK 72

[Close]

BLAST of CmaCh12G006760 vs. TrEMBL
Match: C6T0E4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G181200 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.3e-24
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TE+VK+DLFEDDDEFEEFEINEEW+ K EGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLKRELEDNAER 72
          QL+RELE N E+
Sbjct: 61 QLRRELESNTEK 72

[Close]

BLAST of CmaCh12G006760 vs. TAIR10
Match: AT5G45010.1 (AT5G45010.1 DSS1 homolog on chromosome V)

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-22
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA EPKA  E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELEDNAERK 73
          QLK+ELE+ +E+K
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of CmaCh12G006760 vs. TAIR10
Match: AT1G64750.3 (AT1G64750.3 deletion of SUV3 suppressor 1(I))

HSP 1 Score: 80.5 bits (197), Expect = 4.7e-16
Identity = 54/115 (46.96%), Postives = 64/115 (55.65%), Query Frame = 1


Query: 1   MATEPKAGTEEV-KVDLFEDDDEFEEFEINE----------------------------- 60
           MA EPKA T EV K+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELEDNAERK 73
                       +W E +E KE++QQWEDDWDDDDVNDDFS QL++ELE+  ++K
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: gi|449452971|ref|XP_004144232.1| (PREDICTED: probable 26S proteasome complex subunit sem1-2 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELEDNAERK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: gi|449469525|ref|XP_004152470.1| (PREDICTED: probable 26S proteasome complex subunit sem1-1 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 6.8e-25
Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATE K  TEEVK+DLFEDDDEFEEFEINEEWE+K EGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLKRELEDNAERK 73
          QL+RELE N E+K
Sbjct: 61 QLRRELESNTEKK 73

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: gi|703122731|ref|XP_010102642.1| (hypothetical protein L484_010934 [Morus notabilis])

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-24
Identity = 61/73 (83.56%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TEE K+DLFEDDDEFEEFEIN+EWE K EGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATEPKAATEEAKIDLFEDDDEFEEFEINQEWEDKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLKRELEDNAERK 73
          QL+RELE+N ++K
Sbjct: 61 QLRRELENNQDKK 73

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: gi|802652384|ref|XP_012080089.1| (PREDICTED: probable 26S proteasome complex subunit sem1-1 [Jatropha curcas])

HSP 1 Score: 117.9 bits (294), Expect = 7.5e-24
Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TE+VK+DLFEDDDEFEEFEINEEWE K EGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATEPKAATEDVKMDLFEDDDEFEEFEINEEWEDKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLKRELEDNAER 72
          QL+RELE + E+
Sbjct: 61 QLRRELEKSTEK 72

[Close]

BLAST of CmaCh12G006760 vs. NCBI nr
Match: gi|356508661|ref|XP_003523073.1| (PREDICTED: probable 26S proteasome complex subunit sem1-2 [Glycine max])

HSP 1 Score: 117.9 bits (294), Expect = 7.5e-24
Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSL 60
          MATEPKA TE+VK+DLFEDDDEFEEFEINEEW+ K EGKE+TQQWEDDWDDDDV+DDFSL
Sbjct: 1  MATEPKAATEDVKIDLFEDDDEFEEFEINEEWDDKEEGKEVTQQWEDDWDDDDVSDDFSL 60

Query: 61 QLKRELEDNAER 72
          QL+RELE N E+
Sbjct: 61 QLRRELESNTEK 72

The following BLAST results are available for this feature:

BLAST of CmaCh12G006760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SEM12_ARATH	4.6e-21	73.97	Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana GN=DSS1(V) PE=1 SV=...	[more]
SEM11_ARATH	7.8e-21	72.97	Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana GN=DSS1(I) PE=1...	[more]
SEM1_NEUCR	7.1e-06	43.84	Putative 26S proteasome complex subunit sem-1 OS=Neurospora crassa (strain ATCC ...	[more]

BLAST of CmaCh12G006760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIG9_CUCSA	1.3e-27	93.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358050 PE=4 SV=1	[more]
A0A0A0LU33_CUCSA	4.7e-25	86.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046000 PE=4 SV=1	[more]
W9RJ80_9ROSA	1.1e-24	83.56	Uncharacterized protein OS=Morus notabilis GN=L484_010934 PE=4 SV=1	[more]
A0A0B2P900_GLYSO	5.3e-24	83.33	Putative 26S proteasome complex subunit sem1-1 OS=Glycine soja GN=glysoja_044941...	[more]
C6T0E4_SOYBN	5.3e-24	83.33	Uncharacterized protein OS=Glycine max GN=GLYMA_04G181200 PE=2 SV=1	[more]

BLAST of CmaCh12G006760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45010.1	2.6e-22	73.97	DSS1 homolog on chromosome V	[more]
AT1G64750.3	4.7e-16	46.96	deletion of SUV3 suppressor 1(I)	[more]

BLAST of CmaCh12G006760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452971\|ref\|XP_004144232.1\|	1.9e-27	93.06	PREDICTED: probable 26S proteasome complex subunit sem1-2 [Cucumis sativus]	[more]
gi\|449469525\|ref\|XP_004152470.1\|	6.8e-25	86.30	PREDICTED: probable 26S proteasome complex subunit sem1-1 [Cucumis sativus]	[more]
gi\|703122731\|ref\|XP_010102642.1\|	1.5e-24	83.56	hypothetical protein L484_010934 [Morus notabilis]	[more]
gi\|802652384\|ref\|XP_012080089.1\|	7.5e-24	84.72	PREDICTED: probable 26S proteasome complex subunit sem1-1 [Jatropha curcas]	[more]
gi\|356508661\|ref\|XP_003523073.1\|	7.5e-24	83.33	PREDICTED: probable 26S proteasome complex subunit sem1-2 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007834	DSS1_SEM1

Vocabulary: **Cellular Component**
Term	Definition
GO:0008541	proteasome regulatory particle, lid subcomplex

Vocabulary: **Biological Process**
Term	Definition
GO:0006406	mRNA export from nucleus
GO:0043248	proteasome assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006760.1	CmaCh12G006760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007834	DSS1/SEM1	PFAM	PF05160	DSS1_SEM1	coord: 10..66 score: 1.2
IPR007834	DSS1/SEM1	SMART	SM01385	DSS1_SEM1_2	coord: 9..67 score: 4.4
None	No IPR available	PANTHER	PTHR16771	26 PROTEASOME COMPLEX SUBUNIT DSS1	coord: 1..71 score: 2.0
None	No IPR available	PANTHER	PTHR16771:SF1	SUBFAMILY NOT NAMED	coord: 1..71 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G006760	CsaV3_6G031560	Cucumber (Chinese Long) v3	cmacucB0224
CmaCh12G006760	Carg17646	Silver-seed gourd	carcmaB0172

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G006760	Melon (DHL92) v3.6.1	cmamedB179
CmaCh12G006760	Melon (DHL92) v3.6.1	cmamedB199
CmaCh12G006760	Silver-seed gourd	carcmaB0289
CmaCh12G006760	Silver-seed gourd	carcmaB0502
CmaCh12G006760	Watermelon (97103) v2	cmawmbB200
CmaCh12G006760	Wax gourd	cmawgoB0205
CmaCh12G006760	Cucurbita maxima (Rimu)	cmacmaB181
CmaCh12G006760	Cucurbita maxima (Rimu)	cmacmaB201
CmaCh12G006760	Cucumber (Gy14) v1	cgycmaB0129
CmaCh12G006760	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G006760	Cucurbita moschata (Rifu)	cmacmoB201
CmaCh12G006760	Wild cucumber (PI 183967)	cmacpiB188
CmaCh12G006760	Wild cucumber (PI 183967)	cmacpiB198
CmaCh12G006760	Cucumber (Chinese Long) v2	cmacuB195
CmaCh12G006760	Melon (DHL92) v3.5.1	cmameB164
CmaCh12G006760	Melon (DHL92) v3.5.1	cmameB183
CmaCh12G006760	Watermelon (Charleston Gray)	cmawcgB175
CmaCh12G006760	Watermelon (97103) v1	cmawmB153
CmaCh12G006760	Cucurbita pepo (Zucchini)	cmacpeB181
CmaCh12G006760	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G006760	Bottle gourd (USVL1VR-Ls)	cmalsiB190
CmaCh12G006760	Cucumber (Gy14) v2	cgybcmaB480
CmaCh12G006760	Cucumber (Gy14) v2	cgybcmaB718